CSPI02G14050 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATGAGTGATTCCATCATGGGGATTTACTAAATTCATGAAAAAACCGAACAAAATGTTCGTTCGTATCGTATAATTTGGATAAATTTTGGAGCTCAGATTCTTGAAATGGTGGCGAAATTATGTCAACATCTTCTCCTTCTCTCTCTTCTTTGAATATTCCGTTTGCTTTTTTATGCTTATCTTTTGCCAAAAGTAACGAATTCAACTCGTGAATTTCCTCGTTTTTCAACGCCGCAAACTTCTTCTTCTTCTTCTTCCAAATTGGTATACGGCTAGAATGGATTCTGCTGTTGTGTGGTCGGTAGAGATGGAGTTGGAACCGGAGATTGATCGATTGCCGATTGACCTATTGGCTCATATTTTTGCTATGATCACCTCCTTCACCGATTTGGCTCAGTAATTCATTTTCAATTTCGGTTTTGTTTAATTTTTTCCCCTTCAGTTGCTATTGTTATTTCCCTCTAATTTTGAGGGTTTATGTGACTGTGGGAAAACGCAGGGCGTGCGGCGTATGTAGGAAATGGAAGGAAGGAGTTAAACTGTCTCTCGGTAGGAGGAAGAGTTTGAGTTTCGCTGGTTGGAAGATGGATGATAACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGGGAGCTCGACATGTAATCTCTCTCTCTCTCTTGAAATTTCAGTGAAATTTTCGTCAGTTTGCTTTTCTTCGAGTAGTTTCTAATTACAGATAGTTACTGGTGTTGTGTGTTGTGAGATGAAACTAGTTTTTCAAATTCGCTAGGTTAATCGATTCAATTGGCTTTACGATTACGAACCACAAAAACAGAGGTTTATCTTAAGAGATTGTGATGTTGTTTGGGAATAATTTAGGGAGAAAGTTCTTTGAAATTGGTTTGTAAATCTGGTGTTATATTCTTGATGTTTATGGTTCGTGTTCTTCAGCTCAAGAAGCCGTTGGGGTTGCCATATAACAGACCATGGATTGTATGAAATCTCTCTTGCAAAGTGCATTCCCAACCTCAAGTCCATTTCGCTTTGGGGTATGGCAGGGATCACCGACAAGGGTGTTGTGCAACTGGTATGAATTTGATATTATCTTAGAATGAAATAAACCTTGATTTGTTATTGGAGTATGAGTTTAGGTGGAGTTTTGAACTATTGGATTTCTCTAAATTGTTCATCGTCTAGAATCTCTGTTTGTAGTTTTGGATATTCTAGAGCCCATCCAAGAGTAAACACCAGTTTGAGAAATTCTCTTTGTCCTGAAATTTCATGTTCTTTACAGGACTTTAGGAGGAAGTTTTTGACAACATTTTCTTGTTCTCTCTACTTCAGAAATTTTGGAAATGCATGATTTTTGGAAGTAAGGTTCCACTTGTTCTTAAAAATAAATCTTCATAAGAGAAAAAACAAGAATCTACTTTCAAAACATGGTATTCATAGGTGGAAATTAACTCACCCAAAGTATGTATTCTCAATCAAAATGTCATAGACCCAATTCCCTAAAATCATAAATAAAAGACTTGAATTCGATAAAAGGCCAAAAGAGAACAAGCATAATCCGTGATTTAATATTTTACAAATTTTCTTGCCAATCAAATGTCGTAGGTTTAATCAAACTGTCTTGTATGATTAGTTGAAGTTCTTGGGAGCTAATCCATGCATTTGTAGATATTAAAATAGGGAAAACAAACTCAAATCCCTCCACCCACGTATAAAAAATTTGTATTCCACATGTGCTTTCACTTTACTTTTGTTCTAAAATAGACTTTTTTCTCCACATTTTGGTATCTTACATAGTGATATCACTTCCTTTTCCTAAAACTATATTTGCTTGTGTTCCAAGATTTCCAGAGCCAACTCTTTGCAAAACTTGAACATTGGTGGAACCTTTGTCACAGACGTATCTCTATATGCTATTGCAGATAGCTGCCCAAATTTGAAGGTGATTATTCCAAGCATCTCCTTAACTCCCTGTATAATACCTACATGGTCTTCCACACAATCTTTAATCAAGTCCATTTCTTTCTTAATTCTGTAGACCATTGTCCTTTGGAGCTGTCGCCATGTAACAGAGACCGGACTTCTTATTCTTGTAAGTAAATGCCGTAAACTCGAGTCGATAAATGTTTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTTGCGATAAGTCCATCCCTTCAAATAAAATCAAGAAGTCTGCTTAATTCTATGTGGTCTGTTGTGTGAAATATGCTATAAAATATTCTTCATATAACCTGTAAAGCTTCTATTGTATGTATATGTCTTCATCTTTGCGTTCTTCATCATCAAAAGTAAAATATTAGATTTGTTTATCTTTCCCTCAATAAAGCTGATTATGTTACTTTCAGTTGTTCATTCAAAACTAAATTATACTCTCCTAGTGTAAATATAATTGTATGTAAAAACTAAGCTC TATGAGTGATTCCATCATGGGGATTTACTAAATTCATGAAAAAACCGAACAAAATGTTCGTTCGTATCGTATAATTTGGATAAATTTTGGAGCTCAGATTCTTGAAATGGTGGCGAAATTATGTCAACATCTTCTCCTTCTCTCTCTTCTTTGAATATTCCGTTTGCTTTTTTATGCTTATCTTTTGCCAAAAGTAACGAATTCAACTCGTGAATTTCCTCGTTTTTCAACGCCGCAAACTTCTTCTTCTTCTTCTTCCAAATTGGTATACGGCTAGAATGGATTCTGCTGTTGTGTGGTCGGTAGAGATGGAGTTGGAACCGGAGATTGATCGATTGCCGATTGACCTATTGGCTCATATTTTTGCTATGATCACCTCCTTCACCGATTTGGCTCAGGCGTGCGGCGTATGTAGGAAATGGAAGGAAGGAGTTAAACTGTCTCTCGGTAGGAGGAAGAGTTTGAGTTTCGCTGGTTGGAAGATGGATGATAACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGGGAGCTCGACATCTCAAGAAGCCGTTGGGGTTGCCATATAACAGACCATGGATTGTATGAAATCTCTCTTGCAAAGTGCATTCCCAACCTCAAGTCCATTTCGCTTTGGGGTATGGCAGGGATCACCGACAAGGGTGTTGTGCAACTGATTTCCAGAGCCAACTCTTTGCAAAACTTGAACATTGGTGGAACCTTTGTCACAGACGTATCTCTATATGCTATTGCAGATAGCTGCCCAAATTTGAAGACCATTGTCCTTTGGAGCTGTCGCCATGTAACAGAGACCGGACTTCTTATTCTTGTAAGTAAATGCCGTAAACTCGAGTCGATAAATGTTTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTTGCGATAAGTCCATCCCTTCAAATAAAATCAAGAAGTCTGCTTAATTCTATGTGGTCTGTTGTGTGAAATATGCTATAAAATATTCTTCATATAACCTGTAAAGCTTCTATTGTATGTATATGTCTTCATCTTTGCGTTCTTCATCATCAAAAGTAAAATATTAGATTTGTTTATCTTTCCCTCAATAAAGCTGATTATGTTACTTTCAGTTGTTCATTCAAAACTAAATTATACTCTCCTAGTGTAAATATAATTGTATGTAAAAACTAAGCTC ATGGATTCTGCTGTTGTGTGGTCGGTAGAGATGGAGTTGGAACCGGAGATTGATCGATTGCCGATTGACCTATTGGCTCATATTTTTGCTATGATCACCTCCTTCACCGATTTGGCTCAGGCGTGCGGCGTATGTAGGAAATGGAAGGAAGGAGTTAAACTGTCTCTCGGTAGGAGGAAGAGTTTGAGTTTCGCTGGTTGGAAGATGGATGATAACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGGGAGCTCGACATCTCAAGAAGCCGTTGGGGTTGCCATATAACAGACCATGGATTGTATGAAATCTCTCTTGCAAAGTGCATTCCCAACCTCAAGTCCATTTCGCTTTGGGGTATGGCAGGGATCACCGACAAGGGTGTTGTGCAACTGATTTCCAGAGCCAACTCTTTGCAAAACTTGAACATTGGTGGAACCTTTGTCACAGACGTATCTCTATATGCTATTGCAGATAGCTGCCCAAATTTGAAGACCATTGTCCTTTGGAGCTGTCGCCATGTAACAGAGACCGGACTTCTTATTCTTGTAAGTAAATGCCGTAAACTCGAGTCGATAAATGTTTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTTGCGATAAGTCCATCCCTTCAAATAAAATCAAGAAGTCTGCTTAATTCTATGTGGTCTGTTGTGTGA MDSAVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKCIPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWSVV* Homology
BLAST of CSPI02G14050 vs. ExPASy Swiss-Prot
Match: Q9FH99 (F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 1.6e-86 Identity = 149/215 (69.30%), Postives = 183/215 (85.12%), Query Frame = 0
BLAST of CSPI02G14050 vs. ExPASy Swiss-Prot
Match: O49286 (F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 6.2e-14 Identity = 56/206 (27.18%), Postives = 99/206 (48.06%), Query Frame = 0
BLAST of CSPI02G14050 vs. ExPASy Swiss-Prot
Match: Q9LPL4 (F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.1e-13 Identity = 54/208 (25.96%), Postives = 99/208 (47.60%), Query Frame = 0
BLAST of CSPI02G14050 vs. ExPASy Swiss-Prot
Match: Q9SKK0 (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 7.6e-12 Identity = 36/101 (35.64%), Postives = 61/101 (60.40%), Query Frame = 0
BLAST of CSPI02G14050 vs. ExPASy Swiss-Prot
Match: Q8LB33 (F-box protein At3g58530 OS=Arabidopsis thaliana OX=3702 GN=At3g58530 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.6e-09 Identity = 31/104 (29.81%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of CSPI02G14050 vs. ExPASy TrEMBL
Match: A0A0A0LPU5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G279180 PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 1.2e-129 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
BLAST of CSPI02G14050 vs. ExPASy TrEMBL
Match: A0A1S4E1P2 (F-box protein At5g67140 OS=Cucumis melo OX=3656 GN=LOC103497375 PE=4 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 1.9e-127 Identity = 229/232 (98.71%), Postives = 229/232 (98.71%), Query Frame = 0
BLAST of CSPI02G14050 vs. ExPASy TrEMBL
Match: A0A5D3BMX7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00750 PE=4 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 1.9e-127 Identity = 229/232 (98.71%), Postives = 229/232 (98.71%), Query Frame = 0
BLAST of CSPI02G14050 vs. ExPASy TrEMBL
Match: A0A6J1G699 (F-box protein At5g67140 OS=Cucurbita moschata OX=3662 GN=LOC111451179 PE=4 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 3.7e-118 Identity = 214/233 (91.85%), Postives = 222/233 (95.28%), Query Frame = 0
BLAST of CSPI02G14050 vs. ExPASy TrEMBL
Match: A0A6J1EIZ0 (F-box protein At5g67140-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434817 PE=4 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 6.9e-117 Identity = 211/233 (90.56%), Postives = 223/233 (95.71%), Query Frame = 0
BLAST of CSPI02G14050 vs. NCBI nr
Match: XP_004149695.1 (F-box protein At5g67140 [Cucumis sativus] >KGN61981.1 hypothetical protein Csa_006050 [Cucumis sativus]) HSP 1 Score: 472.2 bits (1214), Expect = 2.5e-129 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
BLAST of CSPI02G14050 vs. NCBI nr
Match: XP_008457759.1 (PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_008457760.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_016902142.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_016902143.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >KAA0045774.1 F-box protein [Cucumis melo var. makuwa] >TYJ99508.1 F-box protein [Cucumis melo var. makuwa]) HSP 1 Score: 464.9 bits (1195), Expect = 4.0e-127 Identity = 229/232 (98.71%), Postives = 229/232 (98.71%), Query Frame = 0
BLAST of CSPI02G14050 vs. NCBI nr
Match: XP_038902095.1 (F-box protein At5g67140-like [Benincasa hispida]) HSP 1 Score: 440.7 bits (1132), Expect = 8.1e-120 Identity = 219/236 (92.80%), Postives = 224/236 (94.92%), Query Frame = 0
BLAST of CSPI02G14050 vs. NCBI nr
Match: KAG7035185.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 436.0 bits (1120), Expect = 2.0e-118 Identity = 215/233 (92.27%), Postives = 223/233 (95.71%), Query Frame = 0
BLAST of CSPI02G14050 vs. NCBI nr
Match: XP_022947259.1 (F-box protein At5g67140 [Cucurbita moschata]) HSP 1 Score: 434.1 bits (1115), Expect = 7.6e-118 Identity = 214/233 (91.85%), Postives = 222/233 (95.28%), Query Frame = 0
BLAST of CSPI02G14050 vs. TAIR 10
Match: AT5G67140.1 (F-box/RNI-like superfamily protein ) HSP 1 Score: 320.5 bits (820), Expect = 1.1e-87 Identity = 149/215 (69.30%), Postives = 183/215 (85.12%), Query Frame = 0
BLAST of CSPI02G14050 vs. TAIR 10
Match: AT1G77000.1 (RNI-like superfamily protein ) HSP 1 Score: 79.3 bits (194), Expect = 4.4e-15 Identity = 56/206 (27.18%), Postives = 99/206 (48.06%), Query Frame = 0
BLAST of CSPI02G14050 vs. TAIR 10
Match: AT1G77000.2 (RNI-like superfamily protein ) HSP 1 Score: 79.3 bits (194), Expect = 4.4e-15 Identity = 56/206 (27.18%), Postives = 99/206 (48.06%), Query Frame = 0
BLAST of CSPI02G14050 vs. TAIR 10
Match: AT1G21410.1 (F-box/RNI-like superfamily protein ) HSP 1 Score: 77.0 bits (188), Expect = 2.2e-14 Identity = 54/208 (25.96%), Postives = 99/208 (47.60%), Query Frame = 0
BLAST of CSPI02G14050 vs. TAIR 10
Match: AT2G25490.1 (EIN3-binding F box protein 1 ) HSP 1 Score: 72.4 bits (176), Expect = 5.4e-13 Identity = 36/101 (35.64%), Postives = 61/101 (60.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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