CSPI02G13980 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACAAAGGCGCATGAAAGGGTCAAGTCGCTGCGGCGAGGCTGAAGAAAGACGCAGGCAGCCGCGTGCAAAGGGGCAGCATCCACACGCTGAACAAACAAACCCAAAACCCCAATTCGCAGCCACAAAAATCAAAGAACAAAACCCAAATCCTCCAATCCAAAAGCAATTGGGGATTATCCGATGAAAGGCTCAAAACAATCCACGCATCGACAAATCTTTTTCCAAAACCCCAAGTTCTCCAACGGGTCGCTCCCATTTTTCTTCTCCGATAACCTCACTGTAATTGGAGAACACTCTCAAGTAGATGCTTCGCCTTAATCTCTACTGCACTAGTTGCTTCTCTCTGATTCGCGATAATAAAAATGTAACGACCTCTTTTCGATTTCAATTAAGGCCAAATCGGAGGCTGAATCCACGGGTTTTGGCCAAAGCCTTGAAGGATGATCAGACTGACGGCGGCGGTGGCAGATTTTCCGGCCAGAAATGGGACCCTGGCTTGGAAATTGAAGTCCCCTTTGAACAACGCCCGGTATCGAATACCCTTTCTATAATTTATTCATCATTCAATTTTATGCTTTTTCTCTTGCATATATTCAATATTCTTTTACCAATTTTGGAGATATTAAACATTGTTTTAAACTCCTAAACATTTCTCTTGATAAAAATTGGAGTAGGGGAAGAGTGAGCTAAGAAGCATGTATATGAGACACGGATACAGTACACAAGCCATTTTTTTAAATTTAGACACTAAGGGGACGTTTATTTTGATGTATTTCACACGTAAAATTTATTAGTATTATCATACCTATTTTTTCAGCCTACCCAACAAGTATTCTATATATATATATCTAACATACTTGTTGATCTAATAAGCGATTGATACATGTCCATCAACAAAAGATACAAGTGTCAAGACTAGTCGAAGTTGAAATGTCACTCCTTGTTAGAGAGTGAACAACTAAAAGTAGACTAGGTTATCTTTGGTAATTAAGTTAATAATATTCAAATCTTGATAAAGTAGTTTCATTTTTATATAATGGGTAGTTGCAAGTCTAGGCTAATTGGAAATAAATACTACAAATATAACAGTTAAAGCAATCGATTAGCGACTTGTTTATTGTGATCTAGCATAAGCATGACTATCCATTCTGTTATCAATTAAAATAATGGACATTATTAAAGCATATAAGTGATGAATGGCTTTTAAAAAGAGTACTATATTTTAACATTTATAGTTTTTTAATAGCAAACTGCATATATACTATTATAGTTTAGCGACATCTATCTGCTCTTTTTTATTCTTAAAATCAGGCTAAGATCTAGGAAATTGTTTGTAAAAGTTGAAATCCTCAAAATGAAAAAAAGTGGATTCAAAACTACAAGACAAGATGTCTCACAATCATGATGAAGAAAATTTGTTTAATGTATAATTGGCAGAATGCGGTAGTGTTACATTTGCATGAGACTAATCTTTAAAAATATGGTTTTCATCTAATTCCAATAATTGTAGTAGGAAAAAATAGACTTTTGCTCTCTAAGATTTGATTTAAGTTGCATAGGGTTATTGAGTTTTTGAACTCAACAATTTTACCCCTGAGGTTTGCTTTCAGTAGCACCTTCAGTTCCCTCTATCAGGGTTTCCGTTAATTTCTAACAAAAAAGATGATGTGTATTTTTTATTTAAAATATATATATATATTTTTTAATGATTAAAATCAAAGAAAACACGTTGATATATTTTCTTTTCCTCTTTTCTCCATCTTCTTCTTTTCTTCCTTCCTCTCGTGGTCTGTTGTCTGCAAACCTATTGTTGAGTTTGAGAGCTCACCGACCCAAATGCAACCTAAACCAAACTTCAAGGATAAAAAATGTAATTTTCAAATGAAAAAAGTTGAATTACAATTTACAATTTTGATCCATGGATTTTAAGTATAGTTATAAATTTGGTCTAAATAGCTTTGAATTTTCAATTTCAAAGTAATCGTTTTACTTTTGATTTAGTTTCAATTTGATCCCATAGTGATAAAATTTCCAATTTGGTCTTATGTAAATTTAGTTAAGTCTCATAAGTCATCTCTAAATTGTGTGTTGCCTAGTTGAAAAATCCGCCTATTTCCTTCCCTCTTTACTCTTTCCTAAATCTAAGTCTTAATATAACCCAAATTTGTCATGTAAAAAAATTTAGGTTAATGTTATAATGACAAGGACAATTGTAAAGTTTTACTGAACTAGAACAACTAAATTGAAAATTATAAATCATAGACATCAAATAGAAACTTTGGCCAAATCATACAAATCAATTTGAAAGTAAGTCTAAATCTTGGAACATTTAAAATCTAAGGAACCAAATGCAATCCTATTGAATTATGATGCACAATATGTGTGGGAGTGCAGGTGAATGAATACTCATCTCTAAAAGACTCGACATTATATTCATGGGGGGAGCTTGGAGCAGCGCCTTTCTTCCTTCGCCTTGGAGGGCTTTGGCTAGGAAGCTTCATAGTGTTAGGAATCCCTGTTGCGGCCGCAAGCTTCAATCCTTCGCGGGTACCTTACAAACTAATAGTACTGAATTTGAAAAAAGCTCGTAATTTAGCGACCCAGCTTTAATTTCTGTGCTTACACTTTTGTTTGTTTAAGGAACCTTTGCGATTTGTGCTTGCTGCTGGAATTGGAACTCTTCTCCTCGTTTCCTTGATTGTCTTGAGAATATATCTGGCAAGTTTCTTCATTATCCATTATTATAGTTCTGGCTTAGGTTAAGTCATATGAATTGAACTGGCAATGGCAGTGGAGGTTAAGGGTATTATGTACAAAAGATTAAGGGTGTGTTTAGCTTTGAGTTTTAAGTGTTTTACTTGAAAAATAAGTCATTTAGCTAATTTTGACATATTTAGCTGACTCAAAATGTCTTTTTAAAAAATGCTGCAAATATGCCTGGCCTATCTGCATTGGCTTCGAGATTTAGTGGTAGTTTAACAAAATGTTAGAATGAAAGATTGTAAGTTCGAGCTTTCTGCAATTCATTTCCTTATCCCTTTATACTGTAATCCATTTGTTGGGGTGGGGGCTTCTCTTAATTTTCAAGGTTATGTAAAGGAAAGAATTAAACGTATGATAGCTTAGTAGCTTAAACTTTGAAAAGTTTTGAGAAGTATTAGTAGTTTTAAGCATAGATGATGGTATTGTGGTTTCAGGGTTGGAGTTATGTGGGAGATAGGCTGTTGTCAGCAGTCATACCTTACGAAGAGAGTGGTTGGTATGATGGCCAAATGTGGGTCAAACCACCCGAGGTAAATTCTTACCATACTTTTATTTTCTTCTCTCAACCTATCATCATGTTTAAACCCGTTTGAATAGCTGTAATCTTATTTTTTGAGGGAATTGATAGGTATGTTAATTGAGATATTATAAGGATATATTAACAATTAGTTAGAGAGTTTGTTAGGTTTGCTGATTTTAAATAGAGTGAGTATCGAGTAGAGAAAGGCGAAGGTAGACAATTAATTCTTTGGAGTGTGAATTAGGGCTTGAGAGTACTCTCAAGATTGAGAGGTTGACGAGGGTCCACATACCCCGAACACTTGATTTATCTTTCGTTATCGTTTGTCTTTCAATATATATGCTGTCATCAGAATATACAAAATCTATATGTATAATTAACCATAGTTTTGTTGGTAATGATAATTTAATCTTCTCAAGTTCTCATGTTGGTTGTAGGTTCTGGCTCGAGATAGATTGTTAGGATCTTACAAGGTATTTATTCTTTACCAACTTAATACATCTTAGAGAAAACTTATTCTAATACAAAATACTATTTATATATCTAAAACTTCAAGGAAAAAACAAAAACTGCAGGTTAAACCAGTGATCAACATGCTCAAACAAACTTTAGTTGGAACAGGGATTGTTCTTGTCTCAGGTGTATTATTTTTCATATTTGCTACACCAGTAGAGGATTTTCTTCAAACCACATTTTCGTCAAACCAAAGCTTACCATCCAGCATTAATCCAGATTCAAACATCAACAAAAAATACAATTTAAGGTAAATGGCATGACAATATCGATTGAGAGGGGTTCTTTCCATATGTTTTTCTTTGTAATTTAGAGTTTATATGTCTTTAGAAAAGACCAGTTGCTTCGGTTACCAGTTGAGGTCCTGGCCGACGATGAGCTTGCTGCGGCAGCGGCCGAGGCAGCCGACGGAAGACCGGTTTACTGTAGGGATCGGTTTTACCGAGCATTAGCTGGGGGACAATACTGCAAATGGGAGGACTTGATCAAGTAAATACAAAGCTGGGGAAGTAATGTTGACAAAAACAACTTTGGTTTCTGTTCCAAGTAAGATCACAATCCTCCTGAAGTGTTCCATTCTACATAGTTTGCCAATTAATTGTAAGTCCTATTTTTCATTAGAATGTTCATAAGTTTTGGTTGTTATATAAGTTGATGGAAAGAGAAGTACTATTGAAGAAGTGAGCTTTGGTTTACCGTAAGCTGAATAGAATAGAAGGTTGATATACATACAATACATAAAGTGCATTTTCTTTTAAATTTTTTCATATCATATAGAAAAACATCACAACTTTGGTAAATTTAAGTATTACATTGAGTGAGAATGAGTAACAAAGGAGGATGGATTATTTTGGTAAATTTGTAAGCAGTTGACGTTATCAAAAGGTGG AACAAAGGCGCATGAAAGGGTCAAGTCGCTGCGGCGAGGCTGAAGAAAGACGCAGGCAGCCGCGTGCAAAGGGGCAGCATCCACACGCTGAACAAACAAACCCAAAACCCCAATTCGCAGCCACAAAAATCAAAGAACAAAACCCAAATCCTCCAATCCAAAAGCAATTGGGGATTATCCGATGAAAGGCTCAAAACAATCCACGCATCGACAAATCTTTTTCCAAAACCCCAAGTTCTCCAACGGGTCGCTCCCATTTTTCTTCTCCGATAACCTCACTGTAATTGGAGAACACTCTCAAGTAGATGCTTCGCCTTAATCTCTACTGCACTAGTTGCTTCTCTCTGATTCGCGATAATAAAAATGTAACGACCTCTTTTCGATTTCAATTAAGGCCAAATCGGAGGCTGAATCCACGGGTTTTGGCCAAAGCCTTGAAGGATGATCAGACTGACGGCGGCGGTGGCAGATTTTCCGGCCAGAAATGGGACCCTGGCTTGGAAATTGAAGTCCCCTTTGAACAACGCCCGGTGAATGAATACTCATCTCTAAAAGACTCGACATTATATTCATGGGGGGAGCTTGGAGCAGCGCCTTTCTTCCTTCGCCTTGGAGGGCTTTGGCTAGGAAGCTTCATAGTGTTAGGAATCCCTGTTGCGGCCGCAAGCTTCAATCCTTCGCGGGAACCTTTGCGATTTGTGCTTGCTGCTGGAATTGGAACTCTTCTCCTCGTTTCCTTGATTGTCTTGAGAATATATCTGGGTTGGAGTTATGTGGGAGATAGGCTGTTGTCAGCAGTCATACCTTACGAAGAGAGTGGTTGGTATGATGGCCAAATGTGGGTCAAACCACCCGAGGTTCTGGCTCGAGATAGATTGTTAGGATCTTACAAGGTTAAACCAGTGATCAACATGCTCAAACAAACTTTAGTTGGAACAGGGATTGTTCTTGTCTCAGGTGTATTATTTTTCATATTTGCTACACCAGTAGAGGATTTTCTTCAAACCACATTTTCGTCAAACCAAAGCTTACCATCCAGCATTAATCCAGATTCAAACATCAACAAAAAATACAATTTAAGAAAAGACCAGTTGCTTCGGTTACCAGTTGAGGTCCTGGCCGACGATGAGCTTGCTGCGGCAGCGGCCGAGGCAGCCGACGGAAGACCGGTTTACTGTAGGGATCGGTTTTACCGAGCATTAGCTGGGGGACAATACTGCAAATGGGAGGACTTGATCAAGTAAATACAAAGCTGGGGAAGTAATGTTGACAAAAACAACTTTGGTTTCTGTTCCAAGTAAGATCACAATCCTCCTGAAGTGTTCCATTCTACATAGTTTGCCAATTAATTGTAAGTCCTATTTTTCATTAGAATGTTCATAAGTTTTGGTTGTTATATAAGTTGATGGAAAGAGAAGTACTATTGAAGAAGTGAGCTTTGGTTTACCGTAAGCTGAATAGAATAGAAGGTTGATATACATACAATACATAAAGTGCATTTTCTTTTAAATTTTTTCATATCATATAGAAAAACATCACAACTTTGGTAAATTTAAGTATTACATTGAGTGAGAATGAGTAACAAAGGAGGATGGATTATTTTGGTAAATTTGTAAGCAGTTGACGTTATCAAAAGGTGG ATGCTTCGCCTTAATCTCTACTGCACTAGTTGCTTCTCTCTGATTCGCGATAATAAAAATGTAACGACCTCTTTTCGATTTCAATTAAGGCCAAATCGGAGGCTGAATCCACGGGTTTTGGCCAAAGCCTTGAAGGATGATCAGACTGACGGCGGCGGTGGCAGATTTTCCGGCCAGAAATGGGACCCTGGCTTGGAAATTGAAGTCCCCTTTGAACAACGCCCGGTGAATGAATACTCATCTCTAAAAGACTCGACATTATATTCATGGGGGGAGCTTGGAGCAGCGCCTTTCTTCCTTCGCCTTGGAGGGCTTTGGCTAGGAAGCTTCATAGTGTTAGGAATCCCTGTTGCGGCCGCAAGCTTCAATCCTTCGCGGGAACCTTTGCGATTTGTGCTTGCTGCTGGAATTGGAACTCTTCTCCTCGTTTCCTTGATTGTCTTGAGAATATATCTGGGTTGGAGTTATGTGGGAGATAGGCTGTTGTCAGCAGTCATACCTTACGAAGAGAGTGGTTGGTATGATGGCCAAATGTGGGTCAAACCACCCGAGGTTCTGGCTCGAGATAGATTGTTAGGATCTTACAAGGTTAAACCAGTGATCAACATGCTCAAACAAACTTTAGTTGGAACAGGGATTGTTCTTGTCTCAGGTGTATTATTTTTCATATTTGCTACACCAGTAGAGGATTTTCTTCAAACCACATTTTCGTCAAACCAAAGCTTACCATCCAGCATTAATCCAGATTCAAACATCAACAAAAAATACAATTTAAGAAAAGACCAGTTGCTTCGGTTACCAGTTGAGGTCCTGGCCGACGATGAGCTTGCTGCGGCAGCGGCCGAGGCAGCCGACGGAAGACCGGTTTACTGTAGGGATCGGTTTTACCGAGCATTAGCTGGGGGACAATACTGCAAATGGGAGGACTTGATCAAGTAA MLRLNLYCTSCFSLIRDNKNVTTSFRFQLRPNRRLNPRVLAKALKDDQTDGGGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSTLYSWGELGAAPFFLRLGGLWLGSFIVLGIPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGIVLVSGVLFFIFATPVEDFLQTTFSSNQSLPSSINPDSNINKKYNLRKDQLLRLPVEVLADDELAAAAAEAADGRPVYCRDRFYRALAGGQYCKWEDLIK* Homology
BLAST of CSPI02G13980 vs. ExPASy Swiss-Prot
Match: Q9FN15 (Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CGLD27 PE=2 SV=1) HSP 1 Score: 426.4 bits (1095), Expect = 2.8e-118 Identity = 212/276 (76.81%), Postives = 238/276 (86.23%), Query Frame = 0
BLAST of CSPI02G13980 vs. ExPASy Swiss-Prot
Match: P51273 (Uncharacterized protein ycf36 OS=Porphyra purpurea OX=2787 GN=ycf36 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 7.0e-29 Identity = 68/157 (43.31%), Postives = 102/157 (64.97%), Query Frame = 0
BLAST of CSPI02G13980 vs. ExPASy Swiss-Prot
Match: Q1XDL3 (Uncharacterized protein ycf36 OS=Pyropia yezoensis OX=2788 GN=ycf36 PE=3 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.0e-28 Identity = 66/157 (42.04%), Postives = 100/157 (63.69%), Query Frame = 0
BLAST of CSPI02G13980 vs. ExPASy Swiss-Prot
Match: P48276 (Uncharacterized protein ycf36 OS=Cyanophora paradoxa OX=2762 GN=ycf36 PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.8e-25 Identity = 64/148 (43.24%), Postives = 93/148 (62.84%), Query Frame = 0
BLAST of CSPI02G13980 vs. ExPASy Swiss-Prot
Match: O78501 (Uncharacterized protein ycf36 OS=Guillardia theta OX=55529 GN=ycf36 PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.2e-15 Identity = 57/158 (36.08%), Postives = 84/158 (53.16%), Query Frame = 0
BLAST of CSPI02G13980 vs. ExPASy TrEMBL
Match: A0A0A0LMH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277630 PE=4 SV=1) HSP 1 Score: 621.7 bits (1602), Expect = 1.7e-174 Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0
BLAST of CSPI02G13980 vs. ExPASy TrEMBL
Match: A0A5D3BLA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00680 PE=4 SV=1) HSP 1 Score: 607.4 bits (1565), Expect = 3.3e-170 Identity = 302/312 (96.79%), Postives = 307/312 (98.40%), Query Frame = 0
BLAST of CSPI02G13980 vs. ExPASy TrEMBL
Match: A0A1S3C6Y4 (uncharacterized protein LOC103497381 OS=Cucumis melo OX=3656 GN=LOC103497381 PE=4 SV=1) HSP 1 Score: 607.4 bits (1565), Expect = 3.3e-170 Identity = 302/312 (96.79%), Postives = 307/312 (98.40%), Query Frame = 0
BLAST of CSPI02G13980 vs. ExPASy TrEMBL
Match: A0A5A7TRK5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003010 PE=4 SV=1) HSP 1 Score: 599.7 bits (1545), Expect = 6.8e-168 Identity = 302/321 (94.08%), Postives = 307/321 (95.64%), Query Frame = 0
BLAST of CSPI02G13980 vs. ExPASy TrEMBL
Match: A0A6J1G705 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451407 PE=4 SV=1) HSP 1 Score: 548.9 bits (1413), Expect = 1.4e-152 Identity = 275/318 (86.48%), Postives = 291/318 (91.51%), Query Frame = 0
BLAST of CSPI02G13980 vs. NCBI nr
Match: XP_004149699.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic isoform X1 [Cucumis sativus] >KGN61972.1 hypothetical protein Csa_006641 [Cucumis sativus]) HSP 1 Score: 621.7 bits (1602), Expect = 3.4e-174 Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0
BLAST of CSPI02G13980 vs. NCBI nr
Match: XP_008457771.1 (PREDICTED: uncharacterized protein LOC103497381 [Cucumis melo] >TYJ99501.1 uncharacterized protein E5676_scaffold123G00680 [Cucumis melo var. makuwa]) HSP 1 Score: 607.4 bits (1565), Expect = 6.7e-170 Identity = 302/312 (96.79%), Postives = 307/312 (98.40%), Query Frame = 0
BLAST of CSPI02G13980 vs. NCBI nr
Match: KAA0045780.1 (uncharacterized protein E6C27_scaffold243G003010 [Cucumis melo var. makuwa]) HSP 1 Score: 599.7 bits (1545), Expect = 1.4e-167 Identity = 302/321 (94.08%), Postives = 307/321 (95.64%), Query Frame = 0
BLAST of CSPI02G13980 vs. NCBI nr
Match: XP_038900298.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Benincasa hispida]) HSP 1 Score: 585.1 bits (1507), Expect = 3.6e-163 Identity = 289/312 (92.63%), Postives = 303/312 (97.12%), Query Frame = 0
BLAST of CSPI02G13980 vs. NCBI nr
Match: XP_022947583.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita moschata] >KAG6605201.1 Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 548.9 bits (1413), Expect = 2.8e-152 Identity = 275/318 (86.48%), Postives = 291/318 (91.51%), Query Frame = 0
BLAST of CSPI02G13980 vs. TAIR 10
Match: AT5G67370.1 (Protein of unknown function (DUF1230) ) HSP 1 Score: 426.4 bits (1095), Expect = 2.0e-119 Identity = 212/276 (76.81%), Postives = 238/276 (86.23%), Query Frame = 0
BLAST of CSPI02G13980 vs. TAIR 10
Match: AT5G11840.1 (Protein of unknown function (DUF1230) ) HSP 1 Score: 148.3 bits (373), Expect = 1.0e-35 Identity = 83/191 (43.46%), Postives = 115/191 (60.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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