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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCGGCTGTCACCAAAACCGGCGGCGCTGATCTCGAAAGAGAGCAAGAAAGAAATCCGGGTAGAGAGAGAGAGAGAGAGGAAACCAAACTCCCACACTCTCCTACCGGCGGCGATCTGGGAGAAGCTAAGGATGGCGGCGTTAGAGAGAAGGAAGTAAGCGGTGGCTTCGGCGTCGGCGGTGGCGTGGAAGTCGGAGGTGGGTCTTGGGTGGCCGGTCTGGTGGGAGGAAGAAAACGAAAAACGAAGGTGGAGTAG mRNA sequence ATGGCGGCTGTCACCAAAACCGGCGGCGCTGATCTCGAAAGAGAGCAAGAAAGAAATCCGGGTAGAGAGAGAGAGAGAGAGGAAACCAAACTCCCACACTCTCCTACCGGCGGCGATCTGGGAGAAGCTAAGGATGGCGGCGTTAGAGAGAAGGAAGTAAGCGGTGGCTTCGGCGTCGGCGGTGGCGTGGAAGTCGGAGGTGGGTCTTGGGTGGCCGGTCTGGTGGGAGGAAGAAAACGAAAAACGAAGGTGGAGTAG Coding sequence (CDS) ATGGCGGCTGTCACCAAAACCGGCGGCGCTGATCTCGAAAGAGAGCAAGAAAGAAATCCGGGTAGAGAGAGAGAGAGAGAGGAAACCAAACTCCCACACTCTCCTACCGGCGGCGATCTGGGAGAAGCTAAGGATGGCGGCGTTAGAGAGAAGGAAGTAAGCGGTGGCTTCGGCGTCGGCGGTGGCGTGGAAGTCGGAGGTGGGTCTTGGGTGGCCGGTCTGGTGGGAGGAAGAAAACGAAAAACGAAGGTGGAGTAG Protein sequence MAAVTKTGGADLEREQERNPGREREREETKLPHSPTGGDLGEAKDGGVREKEVSGGFGVGGGVEVGGGSWVAGLVGGRKRKTKVE*
Homology
BLAST of CSPI02G13910 vs. NCBI nr
Match: KAE8651913.1 (hypothetical protein Csa_023621, partial [Cucumis sativus]) HSP 1 Score: 124.4 bits (311), Expect = 4.7e-25 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 Query: 22 REREREETKLPHSPTGGDLGEAKDGGVREKEVSGGFGVGGGVEVGGGSWVAGLVGGRKRK 81 REREREETKLPHSPTGGDLGEAKDGGVREKEVSGGFGVGGGVEVGGGSWVAGLVGGRKRK Sbjct: 1 REREREETKLPHSPTGGDLGEAKDGGVREKEVSGGFGVGGGVEVGGGSWVAGLVGGRKRK 60
Query: 82 TKVE 86 TKVE Sbjct: 61 TKVE 64
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAE8651913.1 | 4.7e-25 | 100.00 | hypothetical protein Csa_023621, partial [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 10..33 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..85 |
Relationships
The following mRNA feature(s) are a part of this gene:
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