CSPI02G13320 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G13320
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	PLCXc domain-containing protein
Location	Chr2: 13364406 .. 13364648 (-)
RNA-Seq Expression	CSPI02G13320
Synteny	CSPI02G13320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGAAGAGGAAGTACTTTTATAGAGTGGAGAATACGGTGACGCCGAAAGCGGATAATCCGATATTGTGTGTGAAACCGGTGACGAGGAGGATTCATAAATTTGCTCGGTTGTTTATCAATCAGAGCTTTGCAAAAGGAGTGGCCGATAAATTGCAGGTTTTGTCGACGGATTTCATTGATGGGGATTTTGTTGATGCTTGTGTTGGACTTACAAGTGCAAGAATCGAAGGGAAGGCCTAA

mRNA sequence

ATGACGAAGAGGAAGTACTTTTATAGAGTGGAGAATACGGTGACGCCGAAAGCGGATAATCCGATATTGTGTGTGAAACCGGTGACGAGGAGGATTCATAAATTTGCTCGGTTGTTTATCAATCAGAGCTTTGCAAAAGGAGTGGCCGATAAATTGCAGGTTTTGTCGACGGATTTCATTGATGGGGATTTTGTTGATGCTTGTGTTGGACTTACAAGTGCAAGAATCGAAGGGAAGGCCTAA

Coding sequence (CDS)

ATGACGAAGAGGAAGTACTTTTATAGAGTGGAGAATACGGTGACGCCGAAAGCGGATAATCCGATATTGTGTGTGAAACCGGTGACGAGGAGGATTCATAAATTTGCTCGGTTGTTTATCAATCAGAGCTTTGCAAAAGGAGTGGCCGATAAATTGCAGGTTTTGTCGACGGATTTCATTGATGGGGATTTTGTTGATGCTTGTGTTGGACTTACAAGTGCAAGAATCGAAGGGAAGGCCTAA

Protein sequence

MTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFIDGDFVDACVGLTSARIEGKA*

Homology

[Close]

BLAST of CSPI02G13320 vs. ExPASy TrEMBL
Match: A0A0A0LMA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G264560 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.5e-37
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1   MTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 60
           +TKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI
Sbjct: 239 VTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 298

Query: 61  DGDFVDACVGLTSARIEGKA 81
           DGDFVDACVGLTSARIEGKA
Sbjct: 299 DGDFVDACVGLTSARIEGKA 318

[Close]

BLAST of CSPI02G13320 vs. ExPASy TrEMBL
Match: A0A5D3BMM2 (PI-PLC X-box domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001350 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.5e-37
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1   MTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 60
           +TKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI
Sbjct: 239 VTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 298

Query: 61  DGDFVDACVGLTSARIEGKA 81
           DGDFVDACVGLTSARIEGKA
Sbjct: 299 DGDFVDACVGLTSARIEGKA 318

[Close]

BLAST of CSPI02G13320 vs. ExPASy TrEMBL
Match: E5GC05 (1-phosphatidylinositol phosphodiesterase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.5e-37
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1   MTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 60
           +TKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI
Sbjct: 239 VTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 298

Query: 61  DGDFVDACVGLTSARIEGKA 81
           DGDFVDACVGLTSARIEGKA
Sbjct: 299 DGDFVDACVGLTSARIEGKA 318

[Close]

BLAST of CSPI02G13320 vs. ExPASy TrEMBL
Match: A0A1S3C6P4 (PI-PLC X-box domain-containing protein DDB_G0293730 OS=Cucumis melo OX=3656 GN=LOC103497310 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.5e-37
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1   MTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 60
           +TKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI
Sbjct: 239 VTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 298

Query: 61  DGDFVDACVGLTSARIEGKA 81
           DGDFVDACVGLTSARIEGKA
Sbjct: 299 DGDFVDACVGLTSARIEGKA 318

[Close]

BLAST of CSPI02G13320 vs. ExPASy TrEMBL
Match: A0A6J1I4N5 (PI-PLC X-box domain-containing protein DDB_G0293730-like OS=Cucurbita maxima OX=3661 GN=LOC111469840 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.6e-36
Identity = 75/80 (93.75%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1   MTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 60
           +TKRKYFYRVENTVTPKADNP+LCVKPVT+RIHKFARLFINQSFAKGVADKLQVLSTDFI
Sbjct: 239 VTKRKYFYRVENTVTPKADNPVLCVKPVTKRIHKFARLFINQSFAKGVADKLQVLSTDFI 298

Query: 61  DGDFVDACVGLTSARIEGKA 81
           DGDFVDACVGLTSARI+G+A
Sbjct: 299 DGDFVDACVGLTSARIDGRA 318

[Close]

BLAST of CSPI02G13320 vs. NCBI nr
Match: XP_004147027.1 (PI-PLC X-box domain-containing protein DDB_G0293730 [Cucumis sativus] >AVN99020.1 hypothetical protein [Cucumis sativus] >KGN61912.1 hypothetical protein Csa_006502 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 5.1e-37
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1   MTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 60
           +TKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI
Sbjct: 239 VTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 298

Query: 61  DGDFVDACVGLTSARIEGKA 81
           DGDFVDACVGLTSARIEGKA
Sbjct: 299 DGDFVDACVGLTSARIEGKA 318

[Close]

BLAST of CSPI02G13320 vs. NCBI nr
Match: XP_008457664.1 (PREDICTED: PI-PLC X-box domain-containing protein DDB_G0293730 [Cucumis melo] >ADN34004.1 1-phosphatidylinositol phosphodiesterase [Cucumis melo subsp. melo] >KAA0045715.1 PI-PLC X-box domain-containing protein [Cucumis melo var. makuwa] >TYJ99565.1 PI-PLC X-box domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 5.1e-37
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1   MTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 60
           +TKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI
Sbjct: 239 VTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 298

Query: 61  DGDFVDACVGLTSARIEGKA 81
           DGDFVDACVGLTSARIEGKA
Sbjct: 299 DGDFVDACVGLTSARIEGKA 318

[Close]

BLAST of CSPI02G13320 vs. NCBI nr
Match: XP_038902789.1 (PI-PLC X-box domain-containing protein DDB_G0293730 [Benincasa hispida])

HSP 1 Score: 160.6 bits (405), Expect = 5.6e-36
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 1   MTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 60
           +TKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFI+QSF KGVADKLQVLSTDFI
Sbjct: 239 VTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFIHQSFTKGVADKLQVLSTDFI 298

Query: 61  DGDFVDACVGLTSARIEGKA 81
           DGDFVDACVGLTSARIEGKA
Sbjct: 299 DGDFVDACVGLTSARIEGKA 318

[Close]

BLAST of CSPI02G13320 vs. NCBI nr
Match: XP_023534290.1 (PI-PLC X-box domain-containing protein DDB_G0293730-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.2 bits (404), Expect = 7.4e-36
Identity = 75/80 (93.75%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1   MTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 60
           +TKRKYFYRVENTVTPKADNP+LCVKPVT+RIHKFARLFINQSFAKGVADKLQVLSTDFI
Sbjct: 239 VTKRKYFYRVENTVTPKADNPVLCVKPVTKRIHKFARLFINQSFAKGVADKLQVLSTDFI 298

Query: 61  DGDFVDACVGLTSARIEGKA 81
           DGDFVDACVGLTSARI+G+A
Sbjct: 299 DGDFVDACVGLTSARIDGRA 318

[Close]

BLAST of CSPI02G13320 vs. NCBI nr
Match: XP_022971055.1 (PI-PLC X-box domain-containing protein DDB_G0293730-like [Cucurbita maxima])

HSP 1 Score: 160.2 bits (404), Expect = 7.4e-36
Identity = 75/80 (93.75%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1   MTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 60
           +TKRKYFYRVENTVTPKADNP+LCVKPVT+RIHKFARLFINQSFAKGVADKLQVLSTDFI
Sbjct: 239 VTKRKYFYRVENTVTPKADNPVLCVKPVTKRIHKFARLFINQSFAKGVADKLQVLSTDFI 298

Query: 61  DGDFVDACVGLTSARIEGKA 81
           DGDFVDACVGLTSARI+G+A
Sbjct: 299 DGDFVDACVGLTSARIDGRA 318

[Close]

BLAST of CSPI02G13320 vs. TAIR 10
Match: AT4G34920.1 (PLC-like phosphodiesterases superfamily protein )

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-29
Identity = 59/78 (75.64%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 2   TKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFID 61
           + RK+FYRVENTVTP+ADNP++ VKPVT RI K ARLFI+Q  +KG  DKLQ+LSTDFI+
Sbjct: 240 SSRKFFYRVENTVTPQADNPVVWVKPVTDRIRKHARLFISQCVSKGCGDKLQILSTDFIE 299

Query: 62  GDFVDACVGLTSARIEGK 80
           GDFVDACVGLT ARIEGK
Sbjct: 300 GDFVDACVGLTHARIEGK 317

[Close]

BLAST of CSPI02G13320 vs. TAIR 10
Match: AT4G38690.1 (PLC-like phosphodiesterases superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 5.4e-29
Identity = 56/79 (70.89%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 2   TKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFID 61
           T RK+FYRVENTVTP+ DNPI+CVKPVT+RIH +A++FI +   +G ADKLQ+ STDFID
Sbjct: 240 TSRKFFYRVENTVTPQPDNPIMCVKPVTKRIHCYAKVFIIECVKRGCADKLQIFSTDFID 299

Query: 62  GDFVDACVGLTSARIEGKA 81
            +FVDACVGLT AR EGKA
Sbjct: 300 NEFVDACVGLTFARAEGKA 318

[Close]

BLAST of CSPI02G13320 vs. TAIR 10
Match: AT4G34930.1 (PLC-like phosphodiesterases superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 1.7e-27
Identity = 55/79 (69.62%), Postives = 68/79 (86.08%), Query Frame = 0


Query: 1   MTKRKYFYRVENTVTPKADNPILCVKPVTRRIHKFARLFINQSFAKGVADKLQVLSTDFI 60
           ++ RK+FYRVENTVTP+ADNP++ VK VT RI K ARLFI+Q  +KG  DKLQ+LSTDFI
Sbjct: 306 ISSRKFFYRVENTVTPQADNPVVWVKQVTDRIRKHARLFISQCASKGYGDKLQILSTDFI 365

Query: 61  DGDFVDACVGLTSARIEGK 80
           +GDFVDACVGLT AR++G+
Sbjct: 366 EGDFVDACVGLTHARMKGQ 384

The following BLAST results are available for this feature:

BLAST of CSPI02G13320 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI02G13320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMA4	2.5e-37	98.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G264560 PE=4 SV=1	[more]
A0A5D3BMM2	2.5e-37	98.75	PI-PLC X-box domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
E5GC05	2.5e-37	98.75	1-phosphatidylinositol phosphodiesterase OS=Cucumis melo subsp. melo OX=412675 P...	[more]
A0A1S3C6P4	2.5e-37	98.75	PI-PLC X-box domain-containing protein DDB_G0293730 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1I4N5	3.6e-36	93.75	PI-PLC X-box domain-containing protein DDB_G0293730-like OS=Cucurbita maxima OX=...	[more]

BLAST of CSPI02G13320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147027.1	5.1e-37	98.75	PI-PLC X-box domain-containing protein DDB_G0293730 [Cucumis sativus] >AVN99020....	[more]
XP_008457664.1	5.1e-37	98.75	PREDICTED: PI-PLC X-box domain-containing protein DDB_G0293730 [Cucumis melo] >A...	[more]
XP_038902789.1	5.6e-36	96.25	PI-PLC X-box domain-containing protein DDB_G0293730 [Benincasa hispida]	[more]
XP_023534290.1	7.4e-36	93.75	PI-PLC X-box domain-containing protein DDB_G0293730-like [Cucurbita pepo subsp. ...	[more]
XP_022971055.1	7.4e-36	93.75	PI-PLC X-box domain-containing protein DDB_G0293730-like [Cucurbita maxima]	[more]

BLAST of CSPI02G13320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34920.1	1.1e-29	75.64	PLC-like phosphodiesterases superfamily protein	[more]
AT4G38690.1	5.4e-29	70.89	PLC-like phosphodiesterases superfamily protein	[more]
AT4G34930.1	1.7e-27	69.62	PLC-like phosphodiesterases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13593	UNCHARACTERIZED	coord: 2..77
None	No IPR available	PANTHER	PTHR13593:SF101	1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE-LIKE PROTEIN	coord: 2..77
IPR017946	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	SUPERFAMILY	51695	PLC-like phosphodiesterases	coord: 4..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G13320.1	CSPI02G13320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process
molecular_function	GO:0008081	phosphoric diester hydrolase activity