CSPI02G13230 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G13230
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Protodermal factor 1
Location	Chr2: 13327654 .. 13329018 (+)
RNA-Seq Expression	CSPI02G13230
Synteny	CSPI02G13230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTCTCTCTTTCCCATGGATCTTCTCTTCAAGTTCAAGCTCTGTTTTCTTGTCGCATCTCTTCTTTCCGCCACCACCGCGTATGGAGCAGCCATCATCTCTGGCACTGTCTTTTGTGATCAGTGTAAAGATGGCCAAATATCTTTCTTCGATTTCGATCTTCCCGTCAATGGTATGATCATTAAGTTTACGTAAACGGTTATAGTATTTTAGTGTACTTTGAAGATATTTACTAAGTAAAAAGTTTAATCGTTGCAGGAGTTAAAGTTACGTTAGCTTGTGGGGATGGAAAAGGAGGATTTTTTAATGTGAGAGACGACGTCACAAATTTTTTAGGAAGCTTTGTGATGAAAGTGGATGGAACGCCTGATCTTAGGGGTTGCACTGCGAAGGTTAGTGGAGCCGCACCGGGATCGAGGACAAACTGTACCGTACCTGGTAGCCCGCCAAGGAGTCTTAAGTTGGTGTTTAGGTTGTTGAACCTGGAAATGTATTCGCTTGTTGGTCCTTTGGTATCTCAACCTGCTCAACCAAAGCCGTTTTGTAGTCGTCATGTTCCGGTTCCTGGGCCGAAACCACCATCTCCACCTTCTCTGCCGCCCATTCCAAAACTGCCGCCACTTCCGCCACTTCCCCAATTGCCGCCACTTCCCCAATTGCCGCCACTTCCGCCGCTTCCATCGTTTCCACCGCCGATGCGTCAGATGCCGCATATGCCGTACTTGGAAGCTTCTTCTGCTTGCCAACATGAGTAAGTGAAGTTTACATTGGTTGTGTTAATTATATTATTGTTATATGTTCGTTAAAGAATATGGACGAAATTTGTTTTCAGGAATTGGACAAACCCAGATTACAAATGCTATTGGAGGGCAGTGAACCCAGACACAAAGGTAGCCGTTGTTTTTGGAGTAATAGCAGCGAAGCGATACGGAACAGACCTGACCCTAGAGAAGGGACTACAAGGACGAGGGGACCCTTATAAGACCCTTTTAAGGGAAGCCATAACAGCGCTTCTTAATTCCTATAATTCCCTTCAATTCCCCTACCCTCCACTCTCTGTTGTCAAACACTTTAACTGGGCCTTATTGAGCTCTCAACGCTCCGTCCTCCTCACTGCCCTTCACTTCAAACATGCCAACTCCGGCGGATACAGCCACGTCACCTGTAAATTCGAGCGTTGCAAGTGACGGTCACCATCGTACAAAATTTACCATTTTAGTTTCCCAAGTTTTGGTTTTGAAAAATAAGTTTGTTTGGTTAGATTTTCTAGTTTCCAAGTTTTGAGAAATAAGTTTCTTTGGTAGGTAGATTCTAGAATGTGTACTCTTGATCTCAATTTTTTATGAATAAGAGCATCCGGTTCA

mRNA sequence

AAATTCTCTCTTTCCCATGGATCTTCTCTTCAAGTTCAAGCTCTGTTTTCTTGTCGCATCTCTTCTTTCCGCCACCACCGCGTATGGAGCAGCCATCATCTCTGGCACTGTCTTTTGTGATCAGTGTAAAGATGGCCAAATATCTTTCTTCGATTTCGATCTTCCCGTCAATGGAGTTAAAGTTACGTTAGCTTGTGGGGATGGAAAAGGAGGATTTTTTAATGTGAGAGACGACGTCACAAATTTTTTAGGAAGCTTTGTGATGAAAGTGGATGGAACGCCTGATCTTAGGGGTTGCACTGCGAAGGTTAGTGGAGCCGCACCGGGATCGAGGACAAACTGTACCGTACCTGGTAGCCCGCCAAGGAGTCTTAAGTTGGTGTTTAGGTTGTTGAACCTGGAAATGTATTCGCTTGTTGGTCCTTTGGTATCTCAACCTGCTCAACCAAAGCCGTTTTGTAGTCGTCATGTTCCGGTTCCTGGGCCGAAACCACCATCTCCACCTTCTCTGCCGCCCATTCCAAAACTGCCGCCACTTCCGCCACTTCCCCAATTGCCGCCACTTCCCCAATTGCCGCCACTTCCGCCGCTTCCATCGTTTCCACCGCCGATGCGTCAGATGCCGCATATGCCGTACTTGGAAGCTTCTTCTGCTTGCCAACATGAGAATTGGACAAACCCAGATTACAAATGCTATTGGAGGGCAGTGAACCCAGACACAAAGGTAGCCGTTGTTTTTGGAGTAATAGCAGCGAAGCGATACGGAACAGACCTGACCCTAGAGAAGGGACTACAAGGACGAGGGGACCCTTATAAGACCCTTTTAAGGGAAGCCATAACAGCGCTTCTTAATTCCTATAATTCCCTTCAATTCCCCTACCCTCCACTCTCTGTTGTCAAACACTTTAACTGGGCCTTATTGAGCTCTCAACGCTCCGTCCTCCTCACTGCCCTTCACTTCAAACATGCCAACTCCGGCGGATACAGCCACGTCACCTGTAAATTCGAGCGTTGCAAGTGACGGTCACCATCGTACAAAATTTACCATTTTAGTTTCCCAAGTTTTGGTTTTGAAAAATAAGTTTGTTTGGTTAGATTTTCTAGTTTCCAAGTTTTGAGAAATAAGTTTCTTTGGTAGGTAGATTCTAGAATGTGTACTCTTGATCTCAATTTTTTATGAATAAGAGCATCCGGTTCA

Coding sequence (CDS)

ATGGATCTTCTCTTCAAGTTCAAGCTCTGTTTTCTTGTCGCATCTCTTCTTTCCGCCACCACCGCGTATGGAGCAGCCATCATCTCTGGCACTGTCTTTTGTGATCAGTGTAAAGATGGCCAAATATCTTTCTTCGATTTCGATCTTCCCGTCAATGGAGTTAAAGTTACGTTAGCTTGTGGGGATGGAAAAGGAGGATTTTTTAATGTGAGAGACGACGTCACAAATTTTTTAGGAAGCTTTGTGATGAAAGTGGATGGAACGCCTGATCTTAGGGGTTGCACTGCGAAGGTTAGTGGAGCCGCACCGGGATCGAGGACAAACTGTACCGTACCTGGTAGCCCGCCAAGGAGTCTTAAGTTGGTGTTTAGGTTGTTGAACCTGGAAATGTATTCGCTTGTTGGTCCTTTGGTATCTCAACCTGCTCAACCAAAGCCGTTTTGTAGTCGTCATGTTCCGGTTCCTGGGCCGAAACCACCATCTCCACCTTCTCTGCCGCCCATTCCAAAACTGCCGCCACTTCCGCCACTTCCCCAATTGCCGCCACTTCCCCAATTGCCGCCACTTCCGCCGCTTCCATCGTTTCCACCGCCGATGCGTCAGATGCCGCATATGCCGTACTTGGAAGCTTCTTCTGCTTGCCAACATGAGAATTGGACAAACCCAGATTACAAATGCTATTGGAGGGCAGTGAACCCAGACACAAAGGTAGCCGTTGTTTTTGGAGTAATAGCAGCGAAGCGATACGGAACAGACCTGACCCTAGAGAAGGGACTACAAGGACGAGGGGACCCTTATAAGACCCTTTTAAGGGAAGCCATAACAGCGCTTCTTAATTCCTATAATTCCCTTCAATTCCCCTACCCTCCACTCTCTGTTGTCAAACACTTTAACTGGGCCTTATTGAGCTCTCAACGCTCCGTCCTCCTCACTGCCCTTCACTTCAAACATGCCAACTCCGGCGGATACAGCCACGTCACCTGTAAATTCGAGCGTTGCAAGTGA

Protein sequence

MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLACGDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLKLVFRLLNLEMYSLVGPLVSQPAQPKPFCSRHVPVPGPKPPSPPSLPPIPKLPPLPPLPQLPPLPQLPPLPPLPSFPPPMRQMPHMPYLEASSACQHENWTNPDYKCYWRAVNPDTKVAVVFGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSLQFPYPPLSVVKHFNWALLSSQRSVLLTALHFKHANSGGYSHVTCKFERCK*

Homology

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BLAST of CSPI02G13230 vs. ExPASy TrEMBL
Match: A0A0A0LJ27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G264000 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 6.8e-166
Identity = 302/334 (90.42%), Postives = 305/334 (91.32%), Query Frame = 0


Query: 1   MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLAC 60
           MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLAC
Sbjct: 1   MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLAC 60

Query: 61  GDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLK 120
           GDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLK
Sbjct: 61  GDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLK 120

Query: 121 LVFRLLNLEMYSLVGPLVSQPAQPKPFCSRHVPVPGPKPPSPPSLPPIPKLPPLPPLPQL 180
           LVFRLLNLEMYSLVGPLVSQPAQPKPFCSRHVPVPGPKPPSPPSLPPIPKLPPLPPLPQL
Sbjct: 121 LVFRLLNLEMYSLVGPLVSQPAQPKPFCSRHVPVPGPKPPSPPSLPPIPKLPPLPPLPQL 180

Query: 181 PPLPQLPPLPPLPSFPPPMRQMPHMPYLEASSACQHENWTNPDYKCYWRAVNPDTKVAVV 240
           PPLP LPP                     +  +    NWTNPDYKCYWRAVNPDTKVAVV
Sbjct: 181 PPLPPLPPTS-----------------AASIVSTADANWTNPDYKCYWRAVNPDTKVAVV 240

Query: 241 FGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSLQFPYPPLSVVKHFNWA 300
           FGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSL FPYPPLSVVKHFNWA
Sbjct: 241 FGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSLHFPYPPLSVVKHFNWA 300

Query: 301 LLSSQRSVLLTALHFKHANSGGYSHVTCKFERCK 335
           LLSSQRSVLLTALHFKHANSGGYSHV+CKFERCK
Sbjct: 301 LLSSQRSVLLTALHFKHANSGGYSHVSCKFERCK 317

[Close]

BLAST of CSPI02G13230 vs. ExPASy TrEMBL
Match: A0A5D3BLG6 (Protodermal factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001410 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 6.4e-124
Identity = 238/336 (70.83%), Postives = 265/336 (78.87%), Query Frame = 0


Query: 1   MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLAC 60
           MD LFKFKLCFL  SL SA TAYG  ++SG VFCD+CKDGQ+S FDFD P+NGVKV +AC
Sbjct: 1   MDPLFKFKLCFLALSLFSA-TAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIAC 60

Query: 61  GDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLK 120
           GDGKGG  ++R++ TNF G + M  +GTPDL GCTA V+G A G+ TNC+  G PPRSLK
Sbjct: 61  GDGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLK 120

Query: 121 LVFRLLNLEMYSLVGPLVSQPAQPKPFC-SRHVPVPGPKPPSPPSLPPIPKLPPLPPLPQ 180
           L+FRLL+LEMY  V PLVSQP QP  FC SR  PVPGPKPPSPPSLP +PKLPPLP LP 
Sbjct: 121 LLFRLLDLEMYG-VDPLVSQPDQPMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPP 180

Query: 181 LPPLPQLPPLPPLPSFPPPMRQMPHMPYLEASSACQHENWTNPDYKCYWRAVNPDTKVAV 240
           LPP              PPMRQMPH P+LEA SACQHENWTNPDYKCYWRAVNPDTKVAV
Sbjct: 181 LPPF-------------PPMRQMPHTPFLEA-SACQHENWTNPDYKCYWRAVNPDTKVAV 240

Query: 241 VFGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSLQFPYPPLSVVKHFNW 300
           +FG IAA+RYGTD+TL KGLQGRGDPYKTLLREAITA LNSY+SL FPY  LSVV+HFN 
Sbjct: 241 IFGAIAAERYGTDMTLWKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNL 300

Query: 301 ALL-SSQRSVLLTALHFKHANSGGYSHVTCKFERCK 335
           AL+  S+RSVL  AL FKHANSG   HVTCKF+ CK
Sbjct: 301 ALMDGSERSVLHAALRFKHANSGN-GHVTCKFDPCK 319

[Close]

BLAST of CSPI02G13230 vs. ExPASy TrEMBL
Match: A0A1S3C647 (uncharacterized protein LOC103497304 OS=Cucumis melo OX=3656 GN=LOC103497304 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 6.4e-124
Identity = 238/336 (70.83%), Postives = 265/336 (78.87%), Query Frame = 0


Query: 1   MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLAC 60
           MD LFKFKLCFL  SL SA TAYG  ++SG VFCD+CKDGQ+S FDFD P+NGVKV +AC
Sbjct: 1   MDPLFKFKLCFLALSLFSA-TAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIAC 60

Query: 61  GDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLK 120
           GDGKGG  ++R++ TNF G + M  +GTPDL GCTA V+G A G+ TNC+  G PPRSLK
Sbjct: 61  GDGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLK 120

Query: 121 LVFRLLNLEMYSLVGPLVSQPAQPKPFC-SRHVPVPGPKPPSPPSLPPIPKLPPLPPLPQ 180
           L+FRLL+LEMY  V PLVSQP QP  FC SR  PVPGPKPPSPPSLP +PKLPPLP LP 
Sbjct: 121 LLFRLLDLEMYG-VDPLVSQPDQPMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPP 180

Query: 181 LPPLPQLPPLPPLPSFPPPMRQMPHMPYLEASSACQHENWTNPDYKCYWRAVNPDTKVAV 240
           LPP              PPMRQMPH P+LEA SACQHENWTNPDYKCYWRAVNPDTKVAV
Sbjct: 181 LPPF-------------PPMRQMPHTPFLEA-SACQHENWTNPDYKCYWRAVNPDTKVAV 240

Query: 241 VFGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSLQFPYPPLSVVKHFNW 300
           +FG IAA+RYGTD+TL KGLQGRGDPYKTLLREAITA LNSY+SL FPY  LSVV+HFN 
Sbjct: 241 IFGAIAAERYGTDMTLWKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNL 300

Query: 301 ALL-SSQRSVLLTALHFKHANSGGYSHVTCKFERCK 335
           AL+  S+RSVL  AL FKHANSG   HVTCKF+ CK
Sbjct: 301 ALMDGSERSVLHAALRFKHANSGN-GHVTCKFDPCK 319

[Close]

BLAST of CSPI02G13230 vs. ExPASy TrEMBL
Match: A0A6J1JC51 (uncharacterized protein LOC111483701 OS=Cucurbita maxima OX=3661 GN=LOC111483701 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 2.6e-109
Identity = 221/338 (65.38%), Postives = 252/338 (74.56%), Query Frame = 0


Query: 1   MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLAC 60
           MD L K  LCFL A+LLSA TA+G A+++GTVFCDQCKDGQIS FD+  P+NGVKV +AC
Sbjct: 1   MDSLSKLHLCFLAAALLSA-TAHGYAVVTGTVFCDQCKDGQISMFDY--PMNGVKVMVAC 60

Query: 61  GDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLK 120
           GDG GG   +R++ TN  GSF M+ DG PDL GC A V G   G+ T+C   GSPPRSL+
Sbjct: 61  GDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGTGEGATTDCGGAGSPPRSLR 120

Query: 121 LVFRLLNLEMYSLVGPLVSQPAQPKPFCSRHV-PVPGPKP---PSPPSLPPIPKLPPLPP 180
           L+FRL ++EMY +V  L+SQP QP  FCS  V PVP P P   P PP+LPP  K+PPLP 
Sbjct: 121 LMFRLFSMEMY-VVDSLLSQPTQPMSFCSASVHPVPAPAPVVMPPPPNLPPPLKMPPLPQ 180

Query: 181 LPQLPPLPQLPPLPPLPSFPPPMRQMPHMPYLEASSACQHENWTNPDYKCYWRAVNPDTK 240
           LP LPPLPQLPP                MP+LE  SACQHENWTNPDYKCYWRAVNPDTK
Sbjct: 181 LPPLPPLPQLPP----------------MPFLEV-SACQHENWTNPDYKCYWRAVNPDTK 240

Query: 241 VAVVFGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSLQFPYPPLSVVKH 300
           V VVFG++AA RYGTDLTL  GLQGRGDPY+TLLREAITA LNSYNS+ FPYP LSVV+ 
Sbjct: 241 VGVVFGLLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPTLSVVEG 300

Query: 301 FNWALLSSQRSVLLTALHFKHANSGGYSHVTCKFERCK 335
            NWALL SQR+VL TAL FK ANSG  SHVTCKF+ C+
Sbjct: 301 LNWALLGSQRAVLHTALRFKRANSGN-SHVTCKFDPCQ 316

[Close]

BLAST of CSPI02G13230 vs. ExPASy TrEMBL
Match: A0A6J1FXU0 (uncharacterized protein LOC111448725 OS=Cucurbita moschata OX=3662 GN=LOC111448725 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 5.1e-105
Identity = 217/338 (64.20%), Postives = 247/338 (73.08%), Query Frame = 0


Query: 1   MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLAC 60
           MD L    LCFL A+LLSA TA+G A+++GTVFCDQCKDGQIS FD+  P+NGVKV +AC
Sbjct: 1   MDSLTNLHLCFLAAALLSA-TAHGYAVVTGTVFCDQCKDGQISMFDY--PINGVKVMVAC 60

Query: 61  GDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLK 120
           GDG GG   +R++ TN  GSF M+ DG PDL GC A V G   G+ T+C   GSPPRSL+
Sbjct: 61  GDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGTGEGATTDCGGAGSPPRSLR 120

Query: 121 LVFRLLNLEMYSLVGPLVSQPAQPKPFCSRHV-PVPGPKP---PSPPSLPPIPKLPPLPP 180
           L+FRL ++EMY +V  L+SQPAQ   FCS  V PVP P P   PSPP+LPP  K      
Sbjct: 121 LMFRLFSMEMY-VVDSLLSQPAQSMSFCSASVHPVPVPAPVVMPSPPNLPPPSK------ 180

Query: 181 LPQLPPLPQLPPLPPLPSFPPPMRQMPHMPYLEASSACQHENWTNPDYKCYWRAVNPDTK 240
              + PLPQLPPLPPLP           MP+LEA SACQHENWTNP YKCYWRAVNPD K
Sbjct: 181 ---MLPLPQLPPLPPLPP----------MPFLEA-SACQHENWTNPRYKCYWRAVNPDMK 240

Query: 241 VAVVFGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSLQFPYPPLSVVKH 300
           V VVFGV+AA RYGTDLTL  GLQGRGDPY+TLLREAITA LNSYNS+ FPYP LSVV+ 
Sbjct: 241 VGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPALSVVEG 300

Query: 301 FNWALLSSQRSVLLTALHFKHANSGGYSHVTCKFERCK 335
            NWALL SQR+VL TAL FK ANSG   HVTCKF+ C+
Sbjct: 301 LNWALLGSQRAVLHTALRFKRANSGN-GHVTCKFDPCQ 313

[Close]

BLAST of CSPI02G13230 vs. NCBI nr
Match: XP_004147066.3 (protodermal factor 1 [Cucumis sativus] >KAE8651890.1 hypothetical protein Csa_006283 [Cucumis sativus])

HSP 1 Score: 667.9 bits (1722), Expect = 4.5e-188
Identity = 332/334 (99.40%), Postives = 333/334 (99.70%), Query Frame = 0


Query: 1   MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLAC 60
           MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLAC
Sbjct: 1   MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLAC 60

Query: 61  GDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLK 120
           GDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLK
Sbjct: 61  GDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLK 120

Query: 121 LVFRLLNLEMYSLVGPLVSQPAQPKPFCSRHVPVPGPKPPSPPSLPPIPKLPPLPPLPQL 180
           LVFRLLNLEMYSLVGPLVSQPAQPKPFCSRHVPVPGPKPPSPPSLPPIPKLPPLPPLPQL
Sbjct: 121 LVFRLLNLEMYSLVGPLVSQPAQPKPFCSRHVPVPGPKPPSPPSLPPIPKLPPLPPLPQL 180

Query: 181 PPLPQLPPLPPLPSFPPPMRQMPHMPYLEASSACQHENWTNPDYKCYWRAVNPDTKVAVV 240
           PPLPQLPPLPPLPSFPPPMRQMPHMPYLEASSACQHENWTNPDYKCYWRAVNPDTKVAVV
Sbjct: 181 PPLPQLPPLPPLPSFPPPMRQMPHMPYLEASSACQHENWTNPDYKCYWRAVNPDTKVAVV 240

Query: 241 FGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSLQFPYPPLSVVKHFNWA 300
           FGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSL FPYPPLSVVKHFNWA
Sbjct: 241 FGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSLHFPYPPLSVVKHFNWA 300

Query: 301 LLSSQRSVLLTALHFKHANSGGYSHVTCKFERCK 335
           LLSSQRSVLLTALHFKHANSGGYSHV+CKFERCK
Sbjct: 301 LLSSQRSVLLTALHFKHANSGGYSHVSCKFERCK 334

[Close]

BLAST of CSPI02G13230 vs. NCBI nr
Match: XP_008457656.1 (PREDICTED: uncharacterized protein LOC103497304 [Cucumis melo] >KAA0045709.1 protodermal factor 1 [Cucumis melo var. makuwa] >TYJ99571.1 protodermal factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 453.8 bits (1166), Expect = 1.3e-123
Identity = 238/336 (70.83%), Postives = 265/336 (78.87%), Query Frame = 0


Query: 1   MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLAC 60
           MD LFKFKLCFL  SL SA TAYG  ++SG VFCD+CKDGQ+S FDFD P+NGVKV +AC
Sbjct: 1   MDPLFKFKLCFLALSLFSA-TAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIAC 60

Query: 61  GDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLK 120
           GDGKGG  ++R++ TNF G + M  +GTPDL GCTA V+G A G+ TNC+  G PPRSLK
Sbjct: 61  GDGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLK 120

Query: 121 LVFRLLNLEMYSLVGPLVSQPAQPKPFC-SRHVPVPGPKPPSPPSLPPIPKLPPLPPLPQ 180
           L+FRLL+LEMY  V PLVSQP QP  FC SR  PVPGPKPPSPPSLP +PKLPPLP LP 
Sbjct: 121 LLFRLLDLEMYG-VDPLVSQPDQPMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPP 180

Query: 181 LPPLPQLPPLPPLPSFPPPMRQMPHMPYLEASSACQHENWTNPDYKCYWRAVNPDTKVAV 240
           LPP              PPMRQMPH P+LEA SACQHENWTNPDYKCYWRAVNPDTKVAV
Sbjct: 181 LPPF-------------PPMRQMPHTPFLEA-SACQHENWTNPDYKCYWRAVNPDTKVAV 240

Query: 241 VFGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSLQFPYPPLSVVKHFNW 300
           +FG IAA+RYGTD+TL KGLQGRGDPYKTLLREAITA LNSY+SL FPY  LSVV+HFN 
Sbjct: 241 IFGAIAAERYGTDMTLWKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNL 300

Query: 301 ALL-SSQRSVLLTALHFKHANSGGYSHVTCKFERCK 335
           AL+  S+RSVL  AL FKHANSG   HVTCKF+ CK
Sbjct: 301 ALMDGSERSVLHAALRFKHANSGN-GHVTCKFDPCK 319

[Close]

BLAST of CSPI02G13230 vs. NCBI nr
Match: XP_022985735.1 (uncharacterized protein LOC111483701 [Cucurbita maxima])

HSP 1 Score: 405.2 bits (1040), Expect = 5.4e-109
Identity = 221/338 (65.38%), Postives = 252/338 (74.56%), Query Frame = 0


Query: 1   MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLAC 60
           MD L K  LCFL A+LLSA TA+G A+++GTVFCDQCKDGQIS FD+  P+NGVKV +AC
Sbjct: 1   MDSLSKLHLCFLAAALLSA-TAHGYAVVTGTVFCDQCKDGQISMFDY--PMNGVKVMVAC 60

Query: 61  GDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLK 120
           GDG GG   +R++ TN  GSF M+ DG PDL GC A V G   G+ T+C   GSPPRSL+
Sbjct: 61  GDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGTGEGATTDCGGAGSPPRSLR 120

Query: 121 LVFRLLNLEMYSLVGPLVSQPAQPKPFCSRHV-PVPGPKP---PSPPSLPPIPKLPPLPP 180
           L+FRL ++EMY +V  L+SQP QP  FCS  V PVP P P   P PP+LPP  K+PPLP 
Sbjct: 121 LMFRLFSMEMY-VVDSLLSQPTQPMSFCSASVHPVPAPAPVVMPPPPNLPPPLKMPPLPQ 180

Query: 181 LPQLPPLPQLPPLPPLPSFPPPMRQMPHMPYLEASSACQHENWTNPDYKCYWRAVNPDTK 240
           LP LPPLPQLPP                MP+LE  SACQHENWTNPDYKCYWRAVNPDTK
Sbjct: 181 LPPLPPLPQLPP----------------MPFLEV-SACQHENWTNPDYKCYWRAVNPDTK 240

Query: 241 VAVVFGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSLQFPYPPLSVVKH 300
           V VVFG++AA RYGTDLTL  GLQGRGDPY+TLLREAITA LNSYNS+ FPYP LSVV+ 
Sbjct: 241 VGVVFGLLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPTLSVVEG 300

Query: 301 FNWALLSSQRSVLLTALHFKHANSGGYSHVTCKFERCK 335
            NWALL SQR+VL TAL FK ANSG  SHVTCKF+ C+
Sbjct: 301 LNWALLGSQRAVLHTALRFKRANSGN-SHVTCKFDPCQ 316

[Close]

BLAST of CSPI02G13230 vs. NCBI nr
Match: XP_023513005.1 (uncharacterized protein LOC111777579 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.1 bits (1032), Expect = 4.6e-108
Identity = 220/338 (65.09%), Postives = 253/338 (74.85%), Query Frame = 0


Query: 1   MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLAC 60
           MD L K  LCFL A+LLSA TA+G A+++GTVFCDQCKDGQIS FD+  P+NGVKV +AC
Sbjct: 1   MDSLSKLHLCFLAAALLSA-TAHGYAVVTGTVFCDQCKDGQISMFDY--PINGVKVMVAC 60

Query: 61  GDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLK 120
           G+G GG   +R++ TN  GSF M+ DG PDL GC A V G   G+ T+C   GSPPRSL+
Sbjct: 61  GNGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGIGEGATTDCGGAGSPPRSLR 120

Query: 121 LVFRLLNLEMYSLVGPLVSQPAQPKPFCSRHV-PVPGPKP---PSPPSLPPIPKLPPLPP 180
           L+FRL ++EMY +V  L+SQPAQP  FCS  V PVP P P   P PP++PP  K+PPLP 
Sbjct: 121 LMFRLFSMEMY-VVDSLLSQPAQPMSFCSASVHPVPVPAPVVMPPPPNVPPPFKMPPLPQ 180

Query: 181 LPQLPPLPQLPPLPPLPSFPPPMRQMPHMPYLEASSACQHENWTNPDYKCYWRAVNPDTK 240
           LP +PPLPQLPP                MP+LEA SACQHENWTNPDYKCYWRAVNPD K
Sbjct: 181 LPPIPPLPQLPP----------------MPFLEA-SACQHENWTNPDYKCYWRAVNPDMK 240

Query: 241 VAVVFGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSLQFPYPPLSVVKH 300
           V VVFGV+AA RYGTDLTL  GLQGRGDPY+TLLREAITA LNSYNS+ FPYP LSVV+ 
Sbjct: 241 VGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPTLSVVEG 300

Query: 301 FNWALLSSQRSVLLTALHFKHANSGGYSHVTCKFERCK 335
            NWALL SQR+VL TAL FK ANSG  SHVTCKF+ C+
Sbjct: 301 LNWALLGSQRAVLHTALRFKRANSGN-SHVTCKFDPCQ 316

[Close]

BLAST of CSPI02G13230 vs. NCBI nr
Match: XP_038900829.1 (uncharacterized protein LOC120087893 [Benincasa hispida])

HSP 1 Score: 401.4 bits (1030), Expect = 7.8e-108
Identity = 220/340 (64.71%), Postives = 258/340 (75.88%), Query Frame = 0


Query: 1   MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLAC 60
           MD L K KLCFL A+LL A TA+G A+++GTVFCDQCKDG IS FD+  P+NGVKV +AC
Sbjct: 1   MDPLSKLKLCFLTATLLLA-TAHGYAVVTGTVFCDQCKDGHISMFDY--PMNGVKVKVAC 60

Query: 61  GDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLK 120
           GDG GG   +R++ TN  GSF M+ DGTPDL GC A + G   G+  +C   G PP+SL+
Sbjct: 61  GDGNGGVTYMREETTNLFGSFTMRFDGTPDLSGCYATIGGTEQGTTMDCGGAGGPPKSLR 120

Query: 121 LVFRLLNLEMYSLVGPLVSQPAQPKPFCS---RHVPVPGP---KPPSPPSLPPIPKLPPL 180
           L+FRL ++EMY +V  LV+QPA+P  FCS     VPVP P   KPPS PSLP  P  PPL
Sbjct: 121 LMFRLFDMEMY-VVDSLVTQPAKPMSFCSASVNPVPVPAPVITKPPS-PSLPLSP--PPL 180

Query: 181 PPLPQLPPLPQLPPLPPLPSFPPPMRQMPHMPYLEASSACQHENWTNPDYKCYWRAVNPD 240
           PP  +LPPLPQLPPLPPLP  PP       +P+LEA SACQH+NWTNPDY+CYWRAVNPD
Sbjct: 181 PPSFKLPPLPQLPPLPPLPKLPP-------VPFLEA-SACQHDNWTNPDYRCYWRAVNPD 240

Query: 241 TKVAVVFGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSLQFPYPPLSVV 300
           TKV V+FG++AA +YGTDLTL  GLQGRGDPY+TLLREAITA LNSYNSL FPYP +SVV
Sbjct: 241 TKVGVIFGLLAANQYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSLNFPYPTISVV 300

Query: 301 KHFNWALLSSQRSVLLTALHFKHANSGGYSHVTCKFERCK 335
           +  NWALL S R+VLLTAL FK ANS GY HVTCKF+ C+
Sbjct: 301 QRLNWALLGSPRAVLLTALRFKRANS-GYGHVTCKFDPCQ 324

[Close]

BLAST of CSPI02G13230 vs. TAIR 10
Match: AT2G16630.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 255.8 bits (652), Expect = 5.0e-68
Identity = 160/362 (44.20%), Postives = 219/362 (60.50%), Query Frame = 0


Query: 4   LFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLACGDG 63
           L  F   F++    +  T Y  A ++G+VFCDQCKDG+ S FDF  PV+G+K+++ C D 
Sbjct: 8   LLIFVAFFVLCLATNGVTGY--ATVTGSVFCDQCKDGERSLFDF--PVSGIKISVTCADE 67

Query: 64  KGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVS-GAAPGSRTNCTVPGSPPRSLKLV 123
            G  +  R++ TN+LG +VM+ DGTPDL  C A+VS        ++C++   P + LKL+
Sbjct: 68  NGQVYMSREETTNWLGGYVMRFDGTPDLSNCYAQVSDNGVQQDPSSCSIASGPAQKLKLM 127

Query: 124 FRLLNLEMYSLVGPLVSQPAQPKPFCSR------------------HVPV-PGPK----P 183
           F    +E ++    L++QP QP  FC +                   VPV P PK     
Sbjct: 128 FSFFGIETFA-ADALLAQPVQPSSFCPKPPTAPVMPPPQVPVMPPPQVPVKPHPKVPVIS 187

Query: 184 PSPPSLPPIPKLP---PLPPLPQLPPLPQLPPLPPLPSFP----PPMRQMPHMPYLEASS 243
           P PP+  P PK+P   P PP    PPL  +  LPP+ S P    PP+ Q+P MP++E  S
Sbjct: 188 PDPPATLPPPKVPVISPDPPTTLPPPLVPVINLPPVTSPPQFKLPPLPQIPPMPFVE-PS 247

Query: 244 ACQHENWTNPDYKCYWRAVNPDTKVAVVFGVIAAKRYGTDLTLEKGLQGRGDPYKTLLRE 303
           AC H+ W  P+Y+CYWRA+ PDTKVAV FG++A + YGTD+T+ + L GRG+ YKTLLRE
Sbjct: 248 ACSHQLWMKPEYRCYWRAIGPDTKVAVAFGLVAGRIYGTDMTVREALDGRGEAYKTLLRE 307

Query: 304 AITALLNSYNSLQFPYPPLSVVKHFNWALL-SSQRSVLLTALHFKHANSGGYSHVTCKFE 334
           A TALLNSYNSL FPY  ++V+ + N ALL +S+  VL+TA+ F  ANSG     TC+F 
Sbjct: 308 ATTALLNSYNSLGFPYNSVAVITYTNLALLGNSEHDVLMTAIRFIKANSG-----TCRFT 358

The following BLAST results are available for this feature:

BLAST of CSPI02G13230 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI02G13230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ27	6.8e-166	90.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G264000 PE=4 SV=1	[more]
A0A5D3BLG6	6.4e-124	70.83	Protodermal factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123...	[more]
A0A1S3C647	6.4e-124	70.83	uncharacterized protein LOC103497304 OS=Cucumis melo OX=3656 GN=LOC103497304 PE=...	[more]
A0A6J1JC51	2.6e-109	65.38	uncharacterized protein LOC111483701 OS=Cucurbita maxima OX=3661 GN=LOC111483701...	[more]
A0A6J1FXU0	5.1e-105	64.20	uncharacterized protein LOC111448725 OS=Cucurbita moschata OX=3662 GN=LOC1114487...	[more]

BLAST of CSPI02G13230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147066.3	4.5e-188	99.40	protodermal factor 1 [Cucumis sativus] >KAE8651890.1 hypothetical protein Csa_00...	[more]
XP_008457656.1	1.3e-123	70.83	PREDICTED: uncharacterized protein LOC103497304 [Cucumis melo] >KAA0045709.1 pro...	[more]
XP_022985735.1	5.4e-109	65.38	uncharacterized protein LOC111483701 [Cucurbita maxima]	[more]
XP_023513005.1	4.6e-108	65.09	uncharacterized protein LOC111777579 [Cucurbita pepo subsp. pepo]	[more]
XP_038900829.1	7.8e-108	64.71	uncharacterized protein LOC120087893 [Benincasa hispida]	[more]

BLAST of CSPI02G13230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16630.1	5.0e-68	44.20	Pollen Ole e 1 allergen and extensin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_1	coord: 28..114 e-value: 1.3E-6 score: 28.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..194
None	No IPR available	PANTHER	PTHR33210:SF24	OS05G0346700 PROTEIN	coord: 9..331
IPR039923	Protodermal factor 1	PANTHER	PTHR33210	PROTODERMAL FACTOR 1	coord: 9..331

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G13230.1	CSPI02G13230.1	mRNA