CSPI02G12990 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G12990
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	auxin-responsive protein SAUR24-like
Location	Chr2: 13147720 .. 13148290 (+)
RNA-Seq Expression	CSPI02G12990
Synteny	CSPI02G12990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGAATTCAGCTGAAAAATATTCAAACAAAACTTCTTCCTCTAGTTGGTTTCGTCCCACCCAGATAAAAACTTCAGGCATTACAAACGGTCCTTTATCTCAAACAAATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGCCAGGCTTCACCAAAAGTCAGTTGAATGTGCCAAAAGGCCATGTGGCTGTTTACGTAGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCGATACCTTACTTAAACCATCCGTCATTCCAACAACTACTCACTCATGCAGAGGAAGAGTTTGGTTTCCATCATCCTCAAGGGGGTCTGACAATCCCTTGCAAAGAGGATGCCTTTATTAATCTCACTTCAAGGTTGCAAGTCTCTTGAAGTACAAAGAGTAAAGTGAAACCTTTCATTTCTAACAATTTTTTCCTGGGTTTTTCTGATTCATTCAGAATTTTGTAGAATGTAACACCTTCCTGCCTAAAAATGTGAGGCATTATAAAGGTGTAGTGTATTTACTAACAATCAAAAGAATAGACTCATCACTTTCAGCA

mRNA sequence

ACCGAATTCAGCTGAAAAATATTCAAACAAAACTTCTTCCTCTAGTTGGTTTCGTCCCACCCAGATAAAAACTTCAGGCATTACAAACGGTCCTTTATCTCAAACAAATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGCCAGGCTTCACCAAAAGTCAGTTGAATGTGCCAAAAGGCCATGTGGCTGTTTACGTAGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCGATACCTTACTTAAACCATCCGTCATTCCAACAACTACTCACTCATGCAGAGGAAGAGTTTGGTTTCCATCATCCTCAAGGGGGTCTGACAATCCCTTGCAAAGAGGATGCCTTTATTAATCTCACTTCAAGGTTGCAAGTCTCTTGAAGTACAAAGAGTAAAGTGAAACCTTTCATTTCTAACAATTTTTTCCTGGGTTTTTCTGATTCATTCAGAATTTTGTAGAATGTAACACCTTCCTGCCTAAAAATGTGAGGCATTATAAAGGTGTAGTGTATTTACTAACAATCAAAAGAATAGACTCATCACTTTCAGCA

Coding sequence (CDS)

ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGCCAGGCTTCACCAAAAGTCAGTTGAATGTGCCAAAAGGCCATGTGGCTGTTTACGTAGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCGATACCTTACTTAAACCATCCGTCATTCCAACAACTACTCACTCATGCAGAGGAAGAGTTTGGTTTCCATCATCCTCAAGGGGGTCTGACAATCCCTTGCAAAGAGGATGCCTTTATTAATCTCACTTCAAGGTTGCAAGTCTCTTGA

Protein sequence

MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS*

Homology

[Close]

BLAST of CSPI02G12990 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 4.8e-24
Identity = 53/84 (63.10%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 12 AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGF 71
          AK+IL    G   +    PKG +AVYVGE Q+KR++VP+ YLN PSFQ LL+ +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFINLTSRLQ 96
           HP GGLTIPC ED FIN+TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CSPI02G12990 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.4e-23
Identity = 53/84 (63.10%), Postives = 62/84 (73.81%), Query Frame = 0


Query: 12 AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGF 71
          AK+IL      T +    PKG +AVYVGE Q+KR++VPI YLN PSFQ LL+ +EEEFGF
Sbjct: 10 AKKILSRS---TTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFINLTSRLQ 96
           HP GGLTIPC ED FIN+TSR Q
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CSPI02G12990 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.0e-23
Identity = 52/84 (61.90%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 12 AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGF 71
          AK+IL      T +    PKG +AVYVGE Q+KR++VP+ YLN PSFQ LL+ +E+EFGF
Sbjct: 10 AKKILSRS---TAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGF 69

Query: 72 HHPQGGLTIPCKEDAFINLTSRLQ 96
           HP GGLTIPC ED FIN+TSRLQ
Sbjct: 70 DHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CSPI02G12990 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 9.0e-23
Identity = 52/84 (61.90%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 12 AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGF 71
          AK+IL      T +    PKG +AVYVGE Q+KR++VP+ YL+ PSFQ LL+ +EEEFGF
Sbjct: 10 AKKILSRS---TAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFINLTSRLQ 96
           HP GGLTIPC ED FIN+TSRLQ
Sbjct: 70 AHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CSPI02G12990 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFIN 89
          PKG +AVYVGE Q+KR++VP+ YL+ PSFQ LL+ +EEEFGF HP GGLTIPC ED FIN
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of CSPI02G12990 vs. ExPASy TrEMBL
Match: A0A6J1G6T7 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111451395 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.1e-45
Identity = 90/97 (92.78%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQ GFTKSQL+VPKGHVAVYVGEIQRKRF+VPI YLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS 98
          LL+HAEEEFGFHHPQGGLTIPCKEDAFI+LTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CSPI02G12990 vs. ExPASy TrEMBL
Match: A0A6J1KZJ6 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111499688 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.6e-45
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQ GFTKSQL+VPKGHVAVYVGEIQRKRF+VPI YLNHPSFQ 
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60

Query: 61 LLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS 98
          LL+HAEEEFGFHHPQGGLTIPCKEDAFI+LTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CSPI02G12990 vs. ExPASy TrEMBL
Match: A0A6J1FU85 (auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC111448836 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.6e-45
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQPGFTK+QL+VPKGHVAVYVGEIQRKRFVVPI YLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS 98
          LL+HAEE+FGFHHPQGGLTIPCKEDAFI+LTSRL VS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 97

[Close]

BLAST of CSPI02G12990 vs. ExPASy TrEMBL
Match: A0A6J1CXV3 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015448 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-44
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQ 60
          MGIRLLSLVPHAKQ+LK+Q GFTKSQL+VPKGHVAVYVGEIQRKRFVVPI YLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKIQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS 98
          LL+HAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS 97

[Close]

BLAST of CSPI02G12990 vs. ExPASy TrEMBL
Match: A0A6J1G6U1 (auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC111451399 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-44
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQ GFTKSQL+VPKGHVAVYVGEIQRKRFVVPI YLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS 98
          LL+HAEEEFGFHHPQGGLTIPCKEDAF++LTSRL VS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHVS 97

[Close]

BLAST of CSPI02G12990 vs. NCBI nr
Match: XP_038900563.1 (auxin-responsive protein SAUR21-like [Benincasa hispida])

HSP 1 Score: 191.0 bits (484), Expect = 4.7e-45
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQP FTKSQL+VPKGHVAVYVGEIQRKRFVVPI YLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQPSFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS 98
          LL+HAEEEFGFHHPQGG+TIPCKEDAFI+LTSRLQ S
Sbjct: 61 LLSHAEEEFGFHHPQGGITIPCKEDAFIDLTSRLQAS 97

[Close]

BLAST of CSPI02G12990 vs. NCBI nr
Match: XP_022947571.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022947572.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6605023.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.9 bits (481), Expect = 1.0e-44
Identity = 90/97 (92.78%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQ GFTKSQL+VPKGHVAVYVGEIQRKRF+VPI YLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS 98
          LL+HAEEEFGFHHPQGGLTIPCKEDAFI+LTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CSPI02G12990 vs. NCBI nr
Match: XP_022944371.1 (auxin-responsive protein SAUR23-like [Cucurbita moschata])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQPGFTK+QL+VPKGHVAVYVGEIQRKRFVVPI YLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS 98
          LL+HAEE+FGFHHPQGGLTIPCKEDAFI+LTSRL VS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 97

[Close]

BLAST of CSPI02G12990 vs. NCBI nr
Match: XP_023533292.1 (auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 89/97 (91.75%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQ GFTKSQL+VPKGHVAVYVGEIQRKRF+VPI YLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS 98
          LL+HAEEEFGFHHPQGGLTIPCKEDAF++LTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQVS 97

[Close]

BLAST of CSPI02G12990 vs. NCBI nr
Match: XP_023007091.1 (auxin-responsive protein SAUR24-like [Cucurbita maxima])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQ GFTKSQL+VPKGHVAVYVGEIQRKRF+VPI YLNHPSFQ 
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60

Query: 61 LLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS 98
          LL+HAEEEFGFHHPQGGLTIPCKEDAFI+LTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CSPI02G12990 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.4 bits (285), Expect = 5.2e-26
Identity = 55/98 (56.12%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQPGFTKSQLNVPKGHVAVYVGE-IQRKRFVVPIPYLNHPSFQ 60
          M IR+  ++  +KQ+LK     + + + +PKGH+AVYVGE +Q++RFVVP+ YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLK-SLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSRLQVS 98
          +LL  AEEEFGF HP GGLTIPC E  FI+L SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CSPI02G12990 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 2.6e-25
Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILK----MQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHP 60
          M IR+  ++  +KQIL+    +    + S L+VPKG++AVYVGE   KRFVVP+ YL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINLTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ FI+L SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CSPI02G12990 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.7 bits (278), Expect = 3.4e-25
Identity = 53/84 (63.10%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 12 AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGF 71
          AK+IL    G   +    PKG +AVYVGE Q+KR++VP+ YLN PSFQ LL+ +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFINLTSRLQ 96
           HP GGLTIPC ED FIN+TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CSPI02G12990 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 5.8e-25
Identity = 57/105 (54.29%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 1   MGIRLLSLVPHAKQILKMQP------GFTKSQLNVPKGHVAVYVG---EIQRKRFVVPIP 60
           MG+   ++    KQILK+          + S  +VPKGHVAVYVG   E+++KRFVVPI 
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLTHAEEEFGFHHPQGGLTIPCKEDAFINL-TSRLQ 96
           +LNHPSF++ L+ AEEEFGF+HP GGLTIPC+E+ F++L  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CSPI02G12990 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.4 bits (272), Expect = 1.7e-24
Identity = 53/84 (63.10%), Postives = 62/84 (73.81%), Query Frame = 0


Query: 12 AKQILKMQPGFTKSQLNVPKGHVAVYVGEIQRKRFVVPIPYLNHPSFQQLLTHAEEEFGF 71
          AK+IL      T +    PKG +AVYVGE Q+KR++VPI YLN PSFQ LL+ +EEEFGF
Sbjct: 10 AKKILSRS---TTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFINLTSRLQ 96
           HP GGLTIPC ED FIN+TSR Q
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRFQ 90

The following BLAST results are available for this feature:

BLAST of CSPI02G12990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	4.8e-24	63.10	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	2.4e-23	63.10	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	4.0e-23	61.90	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJG1	9.0e-23	61.90	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJF9	1.2e-22	71.21	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]

BLAST of CSPI02G12990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6T7	5.1e-45	92.78	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]
A0A6J1KZJ6	6.6e-45	92.78	auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111499688...	[more]
A0A6J1FU85	6.6e-45	91.75	auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1CXV3	1.1e-44	92.78	auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1G6U1	1.1e-44	91.75	auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]

BLAST of CSPI02G12990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900563.1	4.7e-45	92.78	auxin-responsive protein SAUR21-like [Benincasa hispida]	[more]
XP_022947571.1	1.0e-44	92.78	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022947572.1 auxin-...	[more]
XP_022944371.1	1.4e-44	91.75	auxin-responsive protein SAUR23-like [Cucurbita moschata]	[more]
XP_023533292.1	1.4e-44	91.75	auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007091.1	1.4e-44	92.78	auxin-responsive protein SAUR24-like [Cucurbita maxima]	[more]

BLAST of CSPI02G12990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21210.1	5.2e-26	56.12	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	2.6e-25	56.70	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	3.4e-25	63.10	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	5.8e-25	54.29	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	1.7e-24	63.10	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 14..93 e-value: 3.0E-26 score: 91.4
None	No IPR available	PANTHER	PTHR31929:SF121	AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE	coord: 1..95
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G12990.1	CSPI02G12990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin