CSPI02G12950 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G12950
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	auxin-responsive protein SAUR24-like
Location	Chr2: 13135991 .. 13136613 (+)
RNA-Seq Expression	CSPI02G12950
Synteny	CSPI02G12950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATACTATGAGGCTCAAACAACCAAATTCAATTGTTAACTTCCTCTGCTACTTGGTTCTGTACCAATCTGATCAAAACTTAAAATATTTCTCAACCTTTCATCTTAACACAAATGGGGTTTAGATTGCTATCTTTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGTCAGGGTTTACCAAAAACCAACTGAATGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCGAAGGAAGCGGTTCGTGGTTCCGATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAGCCATGCAGAGGAAGAGTTTGGCTTTCATCATCCTCATGGGGGTCTAACTATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGAAGGATGAAGAGTAAAGAGCAATCTGTCATTTATGACAGTTTTTGTCTGTTCTTTTTCTCCATTCACTTGCTTTTTGACTTGCAGGAGATTGTATAAATTAGAGTGCCTTCTTACTTGTATATGAGCATCATTGTAAAGGAAAATTACTTACAGAAATTGTGATAATTAATACAGAAACAATTCAGCATCAACTTCTATGTCACTTCTTTTGTTCACC

mRNA sequence

CATACTATGAGGCTCAAACAACCAAATTCAATTGTTAACTTCCTCTGCTACTTGGTTCTGTACCAATCTGATCAAAACTTAAAATATTTCTCAACCTTTCATCTTAACACAAATGGGGTTTAGATTGCTATCTTTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGTCAGGGTTTACCAAAAACCAACTGAATGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCGAAGGAAGCGGTTCGTGGTTCCGATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAGCCATGCAGAGGAAGAGTTTGGCTTTCATCATCCTCATGGGGGTCTAACTATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGAAGGATGAAGAGTAAAGAGCAATCTGTCATTTATGACAGTTTTTGTCTGTTCTTTTTCTCCATTCACTTGCTTTTTGACTTGCAGGAGATTGTATAAATTAGAGTGCCTTCTTACTTGTATATGAGCATCATTGTAAAGGAAAATTACTTACAGAAATTGTGATAATTAATACAGAAACAATTCAGCATCAACTTCTATGTCACTTCTTTTGTTCACC

Coding sequence (CDS)

ATGGGGTTTAGATTGCTATCTTTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGTCAGGGTTTACCAAAAACCAACTGAATGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCGAAGGAAGCGGTTCGTGGTTCCGATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAGCCATGCAGAGGAAGAGTTTGGCTTTCATCATCCTCATGGGGGTCTAACTATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGA

Protein sequence

MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA*

Homology

[Close]

BLAST of CSPI02G12950 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-23
Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 12 AKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGF 71
          AK+IL   +G        PKG +AVYVGE ++KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPHGGLTIPCKEDAFVDLTSRLQ 96
           HP GGLTIPC ED F+++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CSPI02G12950 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.3e-23
Identity = 50/79 (63.29%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 17 KMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHG 76
          K+ S  T      PKG +AVYVGE ++KR++VPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFVDLTSRLQ 96
          GLTIPC ED F+++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CSPI02G12950 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 30 PKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 89
          PKG +AVYVGE ++KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of CSPI02G12950 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.0e-22
Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 30 PKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 89
          PKG +AVYVGE ++KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of CSPI02G12950 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.6e-22
Identity = 52/94 (55.32%), Postives = 67/94 (71.28%), Query Frame = 0


Query: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQ 60
          MGFRL    P  ++     +  +   ++V KG++AVYVGE + +RFV+P+SYLN PSFQ 
Sbjct: 1  MGFRL----PGIRKASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPSFQD 60

Query: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRL 95
          LLS AEEEFG+HHP+GGLTIPC ED F  +TS L
Sbjct: 61 LLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFL 89

[Close]

BLAST of CSPI02G12950 vs. ExPASy TrEMBL
Match: A0A0A0LPI0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258720 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 9.9e-49
Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQ 60
          MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEI+RKRFVVPISYLNDPSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 98
          LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CSPI02G12950 vs. ExPASy TrEMBL
Match: A0A5A7TRJ5 (Auxin-responsive protein SAUR24-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001830 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.7e-46
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQ 60
          MG RLLSLVPHAKQILKMQSGFTKN+LNVPKGHVAVYVGEI+RKRFVVPISYLNDPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 98
          LL+ AEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CSPI02G12950 vs. ExPASy TrEMBL
Match: A0A1S3C5I3 (auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC103497281 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.7e-46
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQ 60
          MG RLLSLVPHAKQILKMQSGFTKN+LNVPKGHVAVYVGEI+RKRFVVPISYLNDPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 98
          LL+ AEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CSPI02G12950 vs. ExPASy TrEMBL
Match: A0A5A7TU68 (Auxin-responsive protein SAUR24-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001810 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-44
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQ 60
          MG  LLSLVPHAK+ILKMQSGFTKNQL+VPKGHVAVYVGEI+RKRFVVP+SYLNDPSFQQ
Sbjct: 1  MGVPLLSLVPHAKKILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 98
          LLS AEEEFGFHHPHGGLTIPCKEDAFVDLTSRL+VA
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of CSPI02G12950 vs. ExPASy TrEMBL
Match: A0A1S4E1Q9 (auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC107991561 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-44
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQ 60
          MG  LLSLVPHAK+ILKMQSGFTKNQL+VPKGHVAVYVGEI+RKRFVVP+SYLNDPSFQQ
Sbjct: 1  MGVPLLSLVPHAKKILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 98
          LLS AEEEFGFHHPHGGLTIPCKEDAFVDLTSRL+VA
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of CSPI02G12950 vs. NCBI nr
Match: XP_031736841.1 (auxin-responsive protein SAUR24-like [Cucumis sativus] >KGN61876.1 hypothetical protein Csa_006109 [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 2.0e-48
Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQ 60
          MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEI+RKRFVVPISYLNDPSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 98
          LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CSPI02G12950 vs. NCBI nr
Match: XP_008457632.1 (PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo] >KAA0045674.1 auxin-responsive protein SAUR24-like [Cucumis melo var. makuwa] >TYJ99609.1 auxin-responsive protein SAUR24-like [Cucumis melo var. makuwa])

HSP 1 Score: 194.1 bits (492), Expect = 5.6e-46
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQ 60
          MG RLLSLVPHAKQILKMQSGFTKN+LNVPKGHVAVYVGEI+RKRFVVPISYLNDPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 98
          LL+ AEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CSPI02G12950 vs. NCBI nr
Match: XP_016902164.1 (PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo] >KAA0045676.1 auxin-responsive protein SAUR24-like [Cucumis melo var. makuwa] >TYJ99607.1 auxin-responsive protein SAUR24-like [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 3.1e-44
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQ 60
          MG  LLSLVPHAK+ILKMQSGFTKNQL+VPKGHVAVYVGEI+RKRFVVP+SYLNDPSFQQ
Sbjct: 1  MGVPLLSLVPHAKKILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 98
          LLS AEEEFGFHHPHGGLTIPCKEDAFVDLTSRL+VA
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of CSPI02G12950 vs. NCBI nr
Match: XP_022944365.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022986731.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986733.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986734.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986735.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >KAG6571048.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.6 bits (475), Expect = 5.2e-44
Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQ 60
          MG R LSLVPHAKQILKMQSGFTKNQL+VPKGHVAVYVGEI+RKRFVVPISYLN PSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 98
          LLSHAEE+FGFHHP GGLTIPCKEDAF+DLTSRLQV+
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CSPI02G12950 vs. NCBI nr
Match: XP_022944366.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6571052.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.4 bits (472), Expect = 1.2e-43
Identity = 87/97 (89.69%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQ 60
          MG R LSLVPHAKQILKMQSGFTKNQL+VPKGHVAVYVGEI+RKRF+VPISYLN PSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFMVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 98
          LLSHAEE+FGFHHP GGLTIPCKEDAF+DLTSRLQV+
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CSPI02G12950 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.8 bits (286), Expect = 4.0e-26
Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 1  MGFRLLSLVPHAKQILK----MQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDP 60
          M  R+  ++  +KQIL+    + S  + + L+VPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ F+DL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CSPI02G12950 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.4 bits (285), Expect = 5.2e-26
Identity = 60/105 (57.14%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 1   MGFRLLSLVPHAKQILKMQSGFTKNQL------NVPKGHVAVYVG---EIRRKRFVVPIS 60
           MG    ++    KQILK+ S   +N+       +VPKGHVAVYVG   E+ +KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDL-TSRLQ 96
           +LN PSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CSPI02G12950 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 2.6e-25
Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGE-IRRKRFVVPISYLNDPSFQ 60
          M  R+  ++  +KQ+LK  S  + N + +PKGH+AVYVGE ++++RFVVP++YL+ P FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 98
          +LL  AEEEFGF HP GGLTIPC E  F+DL SRL  +
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CSPI02G12950 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 7.5e-25
Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 12 AKQILKMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGF 71
          AK+IL   +G        PKG +AVYVGE ++KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPHGGLTIPCKEDAFVDLTSRLQ 96
           HP GGLTIPC ED F+++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CSPI02G12950 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.2 bits (269), Expect = 3.7e-24
Identity = 50/79 (63.29%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 17 KMQSGFTKNQLNVPKGHVAVYVGEIRRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHG 76
          K+ S  T      PKG +AVYVGE ++KR++VPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFVDLTSRLQ 96
          GLTIPC ED F+++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

The following BLAST results are available for this feature:

BLAST of CSPI02G12950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	1.1e-23	61.90	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	5.3e-23	63.29	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	1.2e-22	69.70	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJF9	2.0e-22	69.70	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
P33083	2.6e-22	55.32	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CSPI02G12950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPI0	9.9e-49	98.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258720 PE=3 SV=1	[more]
A0A5A7TRJ5	2.7e-46	94.85	Auxin-responsive protein SAUR24-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C5I3	2.7e-46	94.85	auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC103497281 PE=...	[more]
A0A5A7TU68	1.5e-44	91.75	Auxin-responsive protein SAUR24-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S4E1Q9	1.5e-44	91.75	auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC107991561 PE=...	[more]

BLAST of CSPI02G12950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736841.1	2.0e-48	98.97	auxin-responsive protein SAUR24-like [Cucumis sativus] >KGN61876.1 hypothetical ...	[more]
XP_008457632.1	5.6e-46	94.85	PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo] >KAA0045674.1 aux...	[more]
XP_016902164.1	3.1e-44	91.75	PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo] >KAA0045676.1 aux...	[more]
XP_022944365.1	5.2e-44	90.72	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-...	[more]
XP_022944366.1	1.2e-43	89.69	auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6571052.1 Auxin-re...	[more]

BLAST of CSPI02G12950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	4.0e-26	56.70	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	5.2e-26	57.14	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	2.6e-25	54.08	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	7.5e-25	61.90	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	3.7e-24	63.29	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 e-value: 3.0E-25 score: 88.2
None	No IPR available	PANTHER	PTHR31929:SF121	AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE	coord: 1..95
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G12950.1	CSPI02G12950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin