CSPI02G12900 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G12900
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	auxin-responsive protein SAUR21-like
Location	Chr2: 13117919 .. 13118390 (+)
RNA-Seq Expression	CSPI02G12900
Synteny	CSPI02G12900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATTCGTTTGCCATCATCTTTGATTCATCATGCTAAGCAAATTCTTAAAATGAGAAACCAGTCAAATGTACCAAGAGGTCATATTGCTGTTTATGTGGGCGAGATCGATATTCAAAGAAAACGTTTTGTGGTTCCAATATCATTCCTAAACCATCCTTCATTTAAACAACTTCTCAGTCATGTTGAGGAAGAGTTTGGATTTCATCATCCCCATGGAGGTTTAACTATTCCTTGCAAAGAAGATGCCTTTGTAGATCTTACTTCTAGATTTCAACACTCCTAAAAGGAAGAACAACAAAGGCTGTCCACCAATTTTTTTTACAACATTTTTTTTCACCATTTGTTGGTGTTTTGATTCATTCAAATGTTGTATGAAGGAAAGTTATACCATGTTGCTTCATGTTTAATACCATTTCCTTGGTGAATTTCCCACCAAATCATAATACAAACAAAGCAATTCTCCATCA

mRNA sequence

ATGGGAATTCGTTTGCCATCATCTTTGATTCATCATGCTAAGCAAATTCTTAAAATGAGAAACCAGTCAAATGTACCAAGAGGTCATATTGCTGTTTATGTGGGCGAGATCGATATTCAAAGAAAACGTTTTGTGGTTCCAATATCATTCCTAAACCATCCTTCATTTAAACAACTTCTCAGTCATGTTGAGGAAGAGTTTGGATTTCATCATCCCCATGGAGGTTTAACTATTCCTTGCAAAGAAGATGCCTTTGTAGATCTTACTTCTAGATTTCAACACTCCTAAAAGGAAGAACAACAAAGGCTGTCCACCAATTTTTTTTACAACATTTTTTTTCACCATTTGTTGGTGTTTTGATTCATTCAAATGTTGTATGAAGGAAAGTTATACCATGTTGCTTCATGTTTAATACCATTTCCTTGGTGAATTTCCCACCAAATCATAATACAAACAAAGCAATTCTCCATCA

Coding sequence (CDS)

ATGGGAATTCGTTTGCCATCATCTTTGATTCATCATGCTAAGCAAATTCTTAAAATGAGAAACCAGTCAAATGTACCAAGAGGTCATATTGCTGTTTATGTGGGCGAGATCGATATTCAAAGAAAACGTTTTGTGGTTCCAATATCATTCCTAAACCATCCTTCATTTAAACAACTTCTCAGTCATGTTGAGGAAGAGTTTGGATTTCATCATCCCCATGGAGGTTTAACTATTCCTTGCAAAGAAGATGCCTTTGTAGATCTTACTTCTAGATTTCAACACTCCTAA

Protein sequence

MGIRLPSSLIHHAKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS*

Homology

[Close]

BLAST of CSPI02G12900 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.7e-22
Identity = 49/81 (60.49%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 13 AKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHVEEEFGFHHP 72
          AKQI++ R  S+ PRG +AVYVGE D ++KR+VVP+S+LN P F+QLLS  EEEFG+ HP
Sbjct: 10 AKQIIR-RESSSTPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDHP 69

Query: 73 HGGLTIPCKEDAFVDLTSRFQ 94
           GGLTIPC E  F  +TS+ Q
Sbjct: 70 MGGLTIPCHESLFFTVTSQIQ 89

[Close]

BLAST of CSPI02G12900 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.2e-21
Identity = 51/83 (61.45%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 13 AKQILKMRN--QSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHVEEEFGFH 72
          AK+IL       S  P+G +AVYVGE   Q+KR++VPIS+LN PSF+ LLS  EEEFGF 
Sbjct: 10 AKKILSRSTTAASAAPKGFLAVYVGE--SQKKRYLVPISYLNQPSFQALLSKSEEEFGFD 69

Query: 73 HPHGGLTIPCKEDAFVDLTSRFQ 94
          HP GGLTIPC ED F+++TSRFQ
Sbjct: 70 HPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CSPI02G12900 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.2e-21
Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 0


Query: 13 AKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHVEEEFGFHHP 72
          AK+IL     S  P+G +AVYVGE   Q+KR++VP+S+L+ PSF+ LLS  EEEFGF HP
Sbjct: 10 AKKILSRSTASAAPKGFLAVYVGE--SQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHP 69

Query: 73 HGGLTIPCKEDAFVDLTSRFQ 94
           GGLTIPC ED F+++TSR Q
Sbjct: 70 MGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of CSPI02G12900 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.8e-20
Identity = 49/83 (59.04%), Postives = 61/83 (73.49%), Query Frame = 0


Query: 13 AKQILKMRN--QSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHVEEEFGFH 72
          AK+IL       S  P+G +AVYVGE   Q+KR++VP+S+LN PSF+ LLS  EEEFGF 
Sbjct: 10 AKKILSRSTGAGSAAPKGFLAVYVGE--SQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 69

Query: 73 HPHGGLTIPCKEDAFVDLTSRFQ 94
          HP GGLTIPC ED F+++TSR Q
Sbjct: 70 HPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CSPI02G12900 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.1e-20
Identity = 48/83 (57.83%), Postives = 61/83 (73.49%), Query Frame = 0


Query: 13 AKQILKMRNQ--SNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHVEEEFGFH 72
          AK+IL       S  P+G +AVYVGE   Q+KR++VP+S+LN PSF+ LLS  E+EFGF 
Sbjct: 10 AKKILSRSTAAVSAAPKGFLAVYVGE--SQKKRYLVPLSYLNQPSFQALLSKSEDEFGFD 69

Query: 73 HPHGGLTIPCKEDAFVDLTSRFQ 94
          HP GGLTIPC ED F+++TSR Q
Sbjct: 70 HPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CSPI02G12900 vs. ExPASy TrEMBL
Match: A0A0A0LIY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258660 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 5.7e-49
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MGIRLPSSLIHHAKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60
          MGIRLPSSLIHHAKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL
Sbjct: 1  MGIRLPSSLIHHAKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60

Query: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 96
          SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS
Sbjct: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 95

[Close]

BLAST of CSPI02G12900 vs. ExPASy TrEMBL
Match: A0A5A7TS40 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001890 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 8.2e-48
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MGIRLPSSLIHHAKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60
          MGIRLPSSLIHHAKQILK+RNQSNVPRGHIAVYVGEIDIQRKRFVVPIS LNHPSFKQLL
Sbjct: 1  MGIRLPSSLIHHAKQILKIRNQSNVPRGHIAVYVGEIDIQRKRFVVPISLLNHPSFKQLL 60

Query: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 96
          SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS
Sbjct: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 95

[Close]

BLAST of CSPI02G12900 vs. ExPASy TrEMBL
Match: A0A1S3C621 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497276 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 8.2e-48
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MGIRLPSSLIHHAKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60
          MGIRLPSSLIHHAKQILK+RNQSNVPRGHIAVYVGEIDIQRKRFVVPIS LNHPSFKQLL
Sbjct: 1  MGIRLPSSLIHHAKQILKIRNQSNVPRGHIAVYVGEIDIQRKRFVVPISLLNHPSFKQLL 60

Query: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 96
          SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS
Sbjct: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 95

[Close]

BLAST of CSPI02G12900 vs. ExPASy TrEMBL
Match: A0A6J1CXB8 (auxin-responsive protein SAUR20-like OS=Momordica charantia OX=3673 GN=LOC111015441 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45
Identity = 92/100 (92.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MGIRLPSSLIHHAKQILKM-----RNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPS 60
           MGIRLPSSLIHHAKQILKM     RNQ NVPRGHIAVYVGEIDIQRKRFVVPIS LNHPS
Sbjct: 1   MGIRLPSSLIHHAKQILKMQLGFHRNQLNVPRGHIAVYVGEIDIQRKRFVVPISLLNHPS 60

Query: 61  FKQLLSHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 96
           FKQLLSHVEEEFGFHHPHGGLTIPCKEDAF+DLTSRFQHS
Sbjct: 61  FKQLLSHVEEEFGFHHPHGGLTIPCKEDAFIDLTSRFQHS 100

[Close]

BLAST of CSPI02G12900 vs. ExPASy TrEMBL
Match: A0A6J1CX72 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015409 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.7e-35
Identity = 79/99 (79.80%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 1  MGIRLPSSLIHHAKQILKM-----RNQSN-VPRGHIAVYVGEIDIQRKRFVVPISFLNHP 60
          MGIRLPSSLI +AKQILKM     + QS+ VPRGH+AVYVG  DIQRKRFVVP+SFLNHP
Sbjct: 1  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVG--DIQRKRFVVPVSFLNHP 60

Query: 61 SFKQLLSHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQ 94
          SF+QLL+ VEEEFGFHHPHGGLTIPCKEDAF+DLTSR Q
Sbjct: 61 SFQQLLNQVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ 97

[Close]

BLAST of CSPI02G12900 vs. NCBI nr
Match: KGN61870.1 (hypothetical protein Csa_006697 [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 1.2e-48
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MGIRLPSSLIHHAKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60
          MGIRLPSSLIHHAKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL
Sbjct: 1  MGIRLPSSLIHHAKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60

Query: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 96
          SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS
Sbjct: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 95

[Close]

BLAST of CSPI02G12900 vs. NCBI nr
Match: XP_008457628.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045668.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYJ99615.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa])

HSP 1 Score: 199.1 bits (505), Expect = 1.7e-47
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MGIRLPSSLIHHAKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60
          MGIRLPSSLIHHAKQILK+RNQSNVPRGHIAVYVGEIDIQRKRFVVPIS LNHPSFKQLL
Sbjct: 1  MGIRLPSSLIHHAKQILKIRNQSNVPRGHIAVYVGEIDIQRKRFVVPISLLNHPSFKQLL 60

Query: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 96
          SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS
Sbjct: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 95

[Close]

BLAST of CSPI02G12900 vs. NCBI nr
Match: XP_038901507.1 (auxin-responsive protein SAUR21-like [Benincasa hispida])

HSP 1 Score: 194.1 bits (492), Expect = 5.4e-46
Identity = 91/95 (95.79%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 1  MGIRLPSSLIHHAKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60
          MGIRLPSSLIHHAKQILKM+NQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL
Sbjct: 1  MGIRLPSSLIHHAKQILKMKNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60

Query: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 96
          SH EEEFGFHHP GGLTIPCKEDAFVDLTSRFQ S
Sbjct: 61 SHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRFQQS 95

[Close]

BLAST of CSPI02G12900 vs. NCBI nr
Match: XP_022146159.1 (auxin-responsive protein SAUR20-like [Momordica charantia])

HSP 1 Score: 191.8 bits (486), Expect = 2.7e-45
Identity = 92/100 (92.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MGIRLPSSLIHHAKQILKM-----RNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPS 60
           MGIRLPSSLIHHAKQILKM     RNQ NVPRGHIAVYVGEIDIQRKRFVVPIS LNHPS
Sbjct: 1   MGIRLPSSLIHHAKQILKMQLGFHRNQLNVPRGHIAVYVGEIDIQRKRFVVPISLLNHPS 60

Query: 61  FKQLLSHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 96
           FKQLLSHVEEEFGFHHPHGGLTIPCKEDAF+DLTSRFQHS
Sbjct: 61  FKQLLSHVEEEFGFHHPHGGLTIPCKEDAFIDLTSRFQHS 100

[Close]

BLAST of CSPI02G12900 vs. NCBI nr
Match: KAG6605030.1 (Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188.3 bits (477), Expect = 3.0e-44
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MGIRLPSSLIHHAKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60
          MGIRLPSSLIHHAKQ+LKMRN  NVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL
Sbjct: 1  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60

Query: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 96
          SH EEEFGFHHP GGLTIPCKEDAF+DLTSRF H+
Sbjct: 61 SHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA 95

[Close]

BLAST of CSPI02G12900 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.5 bits (288), Expect = 2.3e-26
Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = 0


Query: 14  KQILKMRNQSN-----------VPRGHIAVYVGE-IDIQRKRFVVPISFLNHPSFKQLLS 73
           KQILK+ + +N           VP+GH+AVYVGE I++++KRFVVPISFLNHPSFK+ LS
Sbjct: 13  KQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLS 72

Query: 74  HVEEEFGFHHPHGGLTIPCKEDAFVDL-TSRFQ 94
             EEEFGF+HP GGLTIPC+E+ F+DL  SR Q
Sbjct: 73  RAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CSPI02G12900 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.3 bits (277), Expect = 4.3e-25
Identity = 55/92 (59.78%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 1  MGIRLPSSLIHHAKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLL 60
          M IRL  S + ++KQ    + QS VP+GH+AVYVGE    +KRFVVPIS+LNHPSF+ LL
Sbjct: 1  MAIRL--SRVINSKQ--SQKQQSRVPKGHVAVYVGEEMESKKRFVVPISYLNHPSFQGLL 60

Query: 61 SHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRF 93
          S  EEEFGF+HP GGLTIPC+E+ FV L + +
Sbjct: 61 SRAEEEFGFNHPIGGLTIPCREETFVGLLNSY 88

[Close]

BLAST of CSPI02G12900 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.6 bits (270), Expect = 2.8e-24
Identity = 52/99 (52.53%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 1  MGIRLPSSLIHHAKQILKMRNQSN----VPRGHIAVYVGEIDIQRKRFVVPISFLNHPSF 60
          M IR+ S ++  +KQ+LK  + S+    +P+GH+AVYVGE+ +Q++RFVVP+++L+HP F
Sbjct: 1  MAIRI-SRVLQSSKQLLKSLSHSSNNVAIPKGHLAVYVGEM-MQKRRFVVPVTYLSHPCF 60

Query: 61 KQLLSHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQHS 96
          ++LL   EEEFGF HP GGLTIPC E  F+DL SR   S
Sbjct: 61 QKLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CSPI02G12900 vs. TAIR 10
Match: AT4G38850.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.8 bits (260), Expect = 4.0e-23
Identity = 49/81 (60.49%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 13 AKQILKMRNQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHVEEEFGFHHP 72
          AKQI++ R  S+ PRG +AVYVGE D ++KR+VVP+S+LN P F+QLLS  EEEFG+ HP
Sbjct: 10 AKQIIR-RESSSTPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDHP 69

Query: 73 HGGLTIPCKEDAFVDLTSRFQ 94
           GGLTIPC E  F  +TS+ Q
Sbjct: 70 MGGLTIPCHESLFFTVTSQIQ 89

[Close]

BLAST of CSPI02G12900 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.8 bits (255), Expect = 1.5e-22
Identity = 52/101 (51.49%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 1  MGIRLPSSLIHHAKQILKM---------RNQSNVPRGHIAVYVGEIDIQRKRFVVPISFL 60
          M IR+P  ++  +KQIL+           +  +VP+G++AVYVGE ++  KRFVVP+S+L
Sbjct: 1  MAIRIP-RVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNM--KRFVVPVSYL 60

Query: 61 NHPSFKQLLSHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRF 93
          + PSF+ LL   EEEFGF HP GGLTIPC E+ F+DL SRF
Sbjct: 61 DQPSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRF 98

The following BLAST results are available for this feature:

BLAST of CSPI02G12900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41220	5.7e-22	60.49	Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 S...	[more]
Q9FJG0	2.2e-21	61.45	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF9	2.2e-21	59.26	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
Q9FK62	1.8e-20	59.04	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJF7	4.1e-20	57.83	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]

BLAST of CSPI02G12900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIY9	5.7e-49	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258660 PE=3 SV=1	[more]
A0A5A7TS40	8.2e-48	97.89	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C621	8.2e-48	97.89	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497276 PE=...	[more]
A0A6J1CXB8	1.3e-45	92.00	auxin-responsive protein SAUR20-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1CX72	2.7e-35	79.80	auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]

BLAST of CSPI02G12900 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61870.1	1.2e-48	100.00	hypothetical protein Csa_006697 [Cucumis sativus]	[more]
XP_008457628.1	1.7e-47	97.89	PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045668.1 aux...	[more]
XP_038901507.1	5.4e-46	95.79	auxin-responsive protein SAUR21-like [Benincasa hispida]	[more]
XP_022146159.1	2.7e-45	92.00	auxin-responsive protein SAUR20-like [Momordica charantia]	[more]
KAG6605030.1	3.0e-44	91.58	Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CSPI02G12900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34810.1	2.3e-26	61.29	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	4.3e-25	59.78	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	2.8e-24	52.53	SAUR-like auxin-responsive protein family	[more]
AT4G38850.1	4.0e-23	60.49	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	1.5e-22	51.49	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 19..89 e-value: 1.8E-23 score: 82.6
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..92
None	No IPR available	PANTHER	PTHR31929:SF38	SMALL AUXIN-UP RNA-RELATED	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G12900.1	CSPI02G12900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin