CSPI02G10860 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G10860
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Sterol regulatory element-binding protein cleavage-activating protein, putative
Location	Chr2: 11124646 .. 11126617 (-)
RNA-Seq Expression	CSPI02G10860
Synteny	CSPI02G10860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATGGACCAACTCATAAAAGCTTTGGGATAAGATTTCCACCATTACAAACAACACACACAAATTAATAACCAAATCAGAGGTCTCCATGAAATCCCTTGCCTGTTCCTTTCCCCAGGCTCTCCTCCTTTCAAACCCTCCGCCATGGAATCAAAGAACTCTAATAATCAACCACTCAACTATCACGAACAATCTCACCAATTTCACACCGACATTATCCAGAGGCCAAGTCCAAGTAAACGCCAAAGGCTTCACTAATTCTCCACGCACGGCCAAAAACAGAGAAACCACCGCCCAAAACAATAACGAAGACGACGACGATGAAATTCCAGAAGCCGTATACAGTAGGATTATAACGAGAATCTTGGCATTCGTTGGAATTCCGATGGCGTTCGGTGTGACATTGTTGAAGATTTTCCAAGCGATTAAGGAGCAAAACCTTTGGGATGTGCCTATTTGGGTGCCATTTTTTACGACTTTCCTGACATTCGGAGCTTCGACGATGGGAATTGCTTACGGGACGTTATCGACAAGTTTAGATCCGGAGAAGAAAGGATCTGTGTTGGGATGGGAAGAGGCGCAGAAGAATTGGGTTGAAATGTGGAAGGAAGAAGATGAAGGCAGGCGGTGAAGAAATTTAATGGGCTCTCTATTTGGCTATGGAGAATCGGCGATACTATAACACGGATAAGTAAGTCTGTTCCGATCGTATACCGATAATTAATTTAGCAAAAAAAATGCATATCTTACTTTGTTCTATTGTTCTAAATCACTTATATATCTTTATATTTCATGAAACAAAAATTCTTACTAAAGTATAAAATTGAACATTTATAATTTTATATAATCAATTTAAATATTAAAATAAGATATTTAGATGTAATGTAATTGTTAGTTTGAAGTTTGAAGTGGGAGGAAAGGACAAGGTTATGAGTGGTTGGAAAATGAGAAAAAGCAAGGAAATCCCCAAAAGGACAACTTTTTTCTAAGCCACTTTAAGTTTTAGGGGACTTTGTATATTATAATATCTTATTTGTGCTATTATGATTTATCAAATATACATAAACATAGTATGTAATTTGTATTACACATTTACATTTTATGAGAACATAAGATTGGTCTTCATAGTAGAAATTTTAAGAATAAAATTGTTAATAATATCCATCTATCTTTTCAAATGTTGATATATAATTCAGCACCATTGAAATTGTTGAACCAAACAAACTAGTTGGTTCAAAATTAGTAATTATTTTTTTGTGATCAAAATTTATTTTAAATGTTAAAGCATTAAAAAGTATTTGTAAATATATAAATAAGTTCACCAGAAGAATTGTTTTTATTTCATGTATCCGTTCAAATCAATTATGTAACTTTAAATGAAAATTACAAAATATTCAAATTTTATCAAACAAAATTTCTCATTTTTCAACTTTGTCAAACATCTCTGCCCTAACATATTAATTCTTTTTCTTTAATCTTAATTCAACCTTCAAAGAATAATTCAATTTTCTTTCCCCCCAAAAAAGCCAAATTATGGAATTTAAAAAAAAAAAATTCTCGCAAATCCAAAATATATATATTATATAGTAACGGGAAAACACAAAAGTAAAAGATAAGAGAATTACTCATGCCATAAAACATAACTACACTTCAATGTCCACTAAATCACTTCAATGTCCACTGCAACGATGACTCACTTGTTATCGGTGGTGTTCTGCAGCAAGAGTCGTCATAAGAGCTACAAAGACCGAATAATATCACCCATCGGAGTTAAGAGCAACAACGCGACAAAGAATGATAAGAACTGAGACGACGAAAGAAGAATCTCCGACGCCATTTCATACTTCATTGTGTTTTTTGTAATTATAGCAAAAAAAATTGATGTGTTGTTATTTATGAAGTTTGAATTTAGGATTATTGTTTGAGGTTTAAAGACTTTTTCTATTTATTGATTTTATTGATGGTTTGGAGAT

mRNA sequence

CCATGGACCAACTCATAAAAGCTTTGGGATAAGATTTCCACCATTACAAACAACACACACAAATTAATAACCAAATCAGAGGTCTCCATGAAATCCCTTGCCTGTTCCTTTCCCCAGGCTCTCCTCCTTTCAAACCCTCCGCCATGGAATCAAAGAACTCTAATAATCAACCACTCAACTATCACGAACAATCTCACCAATTTCACACCGACATTATCCAGAGGCCAAGTCCAAGTAAACGCCAAAGGCTTCACTAATTCTCCACGCACGGCCAAAAACAGAGAAACCACCGCCCAAAACAATAACGAAGACGACGACGATGAAATTCCAGAAGCCGTATACAGTAGGATTATAACGAGAATCTTGGCATTCGTTGGAATTCCGATGGCGTTCGGTGTGACATTGTTGAAGATTTTCCAAGCGATTAAGGAGCAAAACCTTTGGGATGTGCCTATTTGGGTGCCATTTTTTACGACTTTCCTGACATTCGGAGCTTCGACGATGGGAATTGCTTACGGGACGTTATCGACAAGTTTAGATCCGGAGAAGAAAGGATCTGTGTTGGGATGGGAAGAGGCGCAGAAGAATTGGGTTGAAATGTGGAAGGAAGAAGATGAAGGCAGGCGGTGAAGAAATTTAATGGGCTCTCTATTTGGCTATGGAGAATCGGCGATACTATAACACGGATAACAAGAGTCGTCATAAGAGCTACAAAGACCGAATAATATCACCCATCGGAGTTAAGAGCAACAACGCGACAAAGAATGATAAGAACTGAGACGACGAAAGAAGAATCTCCGACGCCATTTCATACTTCATTGTGTTTTTTGTAATTATAGCAAAAAAAATTGATGTGTTGTTATTTATGAAGTTTGAATTTAGGATTATTGTTTGAGGTTTAAAGACTTTTTCTATTTATTGATTTTATTGATGGTTTGGAGAT

Coding sequence (CDS)

ATGAAATCCCTTGCCTGTTCCTTTCCCCAGGCTCTCCTCCTTTCAAACCCTCCGCCATGGAATCAAAGAACTCTAATAATCAACCACTCAACTATCACGAACAATCTCACCAATTTCACACCGACATTATCCAGAGGCCAAGTCCAAGTAAACGCCAAAGGCTTCACTAATTCTCCACGCACGGCCAAAAACAGAGAAACCACCGCCCAAAACAATAACGAAGACGACGACGATGAAATTCCAGAAGCCGTATACAGTAGGATTATAACGAGAATCTTGGCATTCGTTGGAATTCCGATGGCGTTCGGTGTGACATTGTTGAAGATTTTCCAAGCGATTAAGGAGCAAAACCTTTGGGATGTGCCTATTTGGGTGCCATTTTTTACGACTTTCCTGACATTCGGAGCTTCGACGATGGGAATTGCTTACGGGACGTTATCGACAAGTTTAGATCCGGAGAAGAAAGGATCTGTGTTGGGATGGGAAGAGGCGCAGAAGAATTGGGTTGAAATGTGGAAGGAAGAAGATGAAGGCAGGCGGTGA

Protein sequence

MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPRTAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR*

Homology

[Close]

BLAST of CSPI02G10860 vs. ExPASy Swiss-Prot
Match: Q9LTD9 (Uncharacterized protein PAM68-like OS=Arabidopsis thaliana OX=3702 GN=At5g52780 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.3e-29
Identity = 74/176 (42.05%), Postives = 113/176 (64.20%), Query Frame = 0


Query: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTI-TNNLTNFTPTLSRGQVQVNAKGFTNSP 60
           M++L CS  + L LS+      +T   N  T+  NN   +   L  G      KGF +S 
Sbjct: 1   MRALLCSH-RLLPLSSLSRTTVKTKSHNPKTLYPNNKPRWESKLHAG-----PKGFQSS- 60

Query: 61  RTAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLW 120
           RT++  +    + + +DD  IP+ V+ R++ RI+  VG P+  GV +LK+ + +K++N+W
Sbjct: 61  RTSE--KPGRPDPDPEDDPPIPQEVFERMMGRIVVSVGTPLGLGVAILKVLEVLKDRNVW 120

Query: 121 DVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEE 176
           DVP+WVP+ TT +TFG+S +GIAYG+LST+LDP K  S+ G +EA++NWVEMWKE+
Sbjct: 121 DVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMWKED 167

[Close]

BLAST of CSPI02G10860 vs. ExPASy Swiss-Prot
Match: O49668 (Protein PAM68, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM68 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-18
Identity = 48/126 (38.10%), Postives = 73/126 (57.94%), Query Frame = 0


Query: 56  TNSPRTAKNRETTAQNNNEDDDDE--------IPEAVYSRIITRILAFVGIPMAFGVTLL 115
           +  P+     +    + +EDDDDE        IPE V +R+I+R+   VG+P+  G+   
Sbjct: 80  SKKPKPGNQSDEDDDDEDEDDDDEEDERERGVIPEIVTNRMISRMGFTVGLPLFIGLLFF 139

Query: 116 KIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKN 174
             F  +K     DVP WVPF  +F+ FG +  G++YG +S+S DP ++GS+LGW EA+KN
Sbjct: 140 PFFYYLKVGLKVDVPTWVPFIVSFVFFGTALAGVSYGIVSSSWDPLREGSLLGWNEAKKN 199

[Close]

BLAST of CSPI02G10860 vs. ExPASy TrEMBL
Match: A0A0A0LLM4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G213970 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.1e-96
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60
           MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR
Sbjct: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60

Query: 61  TAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWD 120
           TAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWD
Sbjct: 61  TAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWD 120

Query: 121 VPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR 180
           VPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR
Sbjct: 121 VPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR 180

[Close]

BLAST of CSPI02G10860 vs. ExPASy TrEMBL
Match: A0A5A7STB5 (Putative Sterol regulatory element-binding protein cleavage-activating protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001970 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80
Identity = 162/185 (87.57%), Postives = 165/185 (89.19%), Query Frame = 0


Query: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60
           MKS  CSF QALLL  PPP NQRT+IIN STIT NL+NFT T SRGQVQVNAKGFT SP 
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFT-TTSRGQVQVNAKGFTGSPA 60

Query: 61  TAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120
           TAKNRET A     QNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE
Sbjct: 61  TAKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120

Query: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEE 180
           QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEE
Sbjct: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEE 180

[Close]

BLAST of CSPI02G10860 vs. ExPASy TrEMBL
Match: A0A1S3AZ57 (uncharacterized protein PAM68-like OS=Cucumis melo OX=3656 GN=LOC103484134 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80
Identity = 162/185 (87.57%), Postives = 165/185 (89.19%), Query Frame = 0


Query: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60
           MKS  CSF QALLL  PPP NQRT+IIN STIT NL+NFT T SRGQVQVNAKGFT SP 
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFT-TTSRGQVQVNAKGFTGSPA 60

Query: 61  TAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120
           TAKNRET A     QNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE
Sbjct: 61  TAKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120

Query: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEE 180
           QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEE
Sbjct: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEE 180

[Close]

BLAST of CSPI02G10860 vs. ExPASy TrEMBL
Match: A0A5D3DHC5 (Putative Sterol regulatory element-binding protein cleavage-activating protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G001260 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.9e-80
Identity = 161/185 (87.03%), Postives = 164/185 (88.65%), Query Frame = 0


Query: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60
           MKS  CSF QALLL  PPP NQRT+IIN STIT N +NFT T SRGQVQVNAKGFT SP 
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFT-TTSRGQVQVNAKGFTGSPA 60

Query: 61  TAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120
           TAKNRET A     QNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE
Sbjct: 61  TAKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120

Query: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEE 180
           QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEE
Sbjct: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVVGWEEAQKNWVEMWKEE 180

[Close]

BLAST of CSPI02G10860 vs. ExPASy TrEMBL
Match: A0A6J1CGP3 (uncharacterized protein PAM68-like OS=Momordica charantia OX=3673 GN=LOC111011500 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.2e-63
Identity = 131/186 (70.43%), Postives = 150/186 (80.65%), Query Frame = 0


Query: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60
           MK+L CS+ QAL LS PPPW  R+  IN STIT NLTN +  ++RG V+VNAKGFT +P 
Sbjct: 1   MKALLCSYRQALHLSEPPPWKPRSR-INDSTITKNLTNLS-RIARGDVRVNAKGFTGTPA 60

Query: 61  TAKNRETTAQ------NNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIK 120
           TAK RE  A+      N++ DDDDEI EAV +RIITRILAFVG+PMAFGV LLKIF+ IK
Sbjct: 61  TAKEREAAARKISGQNNSSNDDDDEISEAVSNRIITRILAFVGVPMAFGVALLKIFETIK 120

Query: 121 EQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKE 180
           EQ +WDVPIW+PF TTFLTFGAST+GIAYGTLS SLDPEK+GS+ GWEEAQKNWVEMWKE
Sbjct: 121 EQKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKE 180

[Close]

BLAST of CSPI02G10860 vs. NCBI nr
Match: XP_004150568.1 (uncharacterized protein PAM68-like [Cucumis sativus] >KGN61652.1 hypothetical protein Csa_006286 [Cucumis sativus])

HSP 1 Score: 362.5 bits (929), Expect = 2.2e-96
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60
           MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR
Sbjct: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60

Query: 61  TAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWD 120
           TAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWD
Sbjct: 61  TAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWD 120

Query: 121 VPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR 180
           VPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR
Sbjct: 121 VPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR 180

[Close]

BLAST of CSPI02G10860 vs. NCBI nr
Match: XP_008439311.1 (PREDICTED: uncharacterized protein PAM68-like [Cucumis melo] >KAA0033723.1 putative Sterol regulatory element-binding protein cleavage-activating protein [Cucumis melo var. makuwa])

HSP 1 Score: 309.3 bits (791), Expect = 2.2e-80
Identity = 162/185 (87.57%), Postives = 165/185 (89.19%), Query Frame = 0


Query: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60
           MKS  CSF QALLL  PPP NQRT+IIN STIT NL+NFT T SRGQVQVNAKGFT SP 
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFT-TTSRGQVQVNAKGFTGSPA 60

Query: 61  TAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120
           TAKNRET A     QNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE
Sbjct: 61  TAKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120

Query: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEE 180
           QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEE
Sbjct: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEE 180

[Close]

BLAST of CSPI02G10860 vs. NCBI nr
Match: TYK23016.1 (putative Sterol regulatory element-binding protein cleavage-activating protein [Cucumis melo var. makuwa])

HSP 1 Score: 306.6 bits (784), Expect = 1.4e-79
Identity = 161/185 (87.03%), Postives = 164/185 (88.65%), Query Frame = 0


Query: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60
           MKS  CSF QALLL  PPP NQRT+IIN STIT N +NFT T SRGQVQVNAKGFT SP 
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFT-TTSRGQVQVNAKGFTGSPA 60

Query: 61  TAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120
           TAKNRET A     QNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE
Sbjct: 61  TAKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120

Query: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEE 180
           QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEE
Sbjct: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVVGWEEAQKNWVEMWKEE 180

[Close]

BLAST of CSPI02G10860 vs. NCBI nr
Match: XP_038877436.1 (uncharacterized protein PAM68-like [Benincasa hispida])

HSP 1 Score: 286.2 bits (731), Expect = 2.0e-73
Identity = 150/186 (80.65%), Postives = 160/186 (86.02%), Query Frame = 0


Query: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60
           MK+L CSF QALLLS PPPWNQR+  IN STIT  L+NFT  +SRGQVQVNAKGF+ SP 
Sbjct: 1   MKALVCSFCQALLLSKPPPWNQRSR-INDSTITKKLSNFT-RISRGQVQVNAKGFSGSPS 60

Query: 61  TAKNRETTAQ------NNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIK 120
           TAK+RE  A+      N  EDDDDEIPEAVYSRIITRILAFVG+PMAFGVTLLKIFQAIK
Sbjct: 61  TAKDREIEAKKLSGQNNKKEDDDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQAIK 120

Query: 121 EQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKE 180
           EQN+WDVPIW+PF TTFLTFGASTMGIAYGTLSTSLDPEKKGSV GWEEAQKNWVEMWKE
Sbjct: 121 EQNVWDVPIWLPFLTTFLTFGASTMGIAYGTLSTSLDPEKKGSVFGWEEAQKNWVEMWKE 180

[Close]

BLAST of CSPI02G10860 vs. NCBI nr
Match: XP_022140980.1 (uncharacterized protein PAM68-like [Momordica charantia])

HSP 1 Score: 252.7 bits (644), Expect = 2.4e-63
Identity = 131/186 (70.43%), Postives = 150/186 (80.65%), Query Frame = 0


Query: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60
           MK+L CS+ QAL LS PPPW  R+  IN STIT NLTN +  ++RG V+VNAKGFT +P 
Sbjct: 1   MKALLCSYRQALHLSEPPPWKPRSR-INDSTITKNLTNLS-RIARGDVRVNAKGFTGTPA 60

Query: 61  TAKNRETTAQ------NNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIK 120
           TAK RE  A+      N++ DDDDEI EAV +RIITRILAFVG+PMAFGV LLKIF+ IK
Sbjct: 61  TAKEREAAARKISGQNNSSNDDDDEISEAVSNRIITRILAFVGVPMAFGVALLKIFETIK 120

Query: 121 EQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKE 180
           EQ +WDVPIW+PF TTFLTFGAST+GIAYGTLS SLDPEK+GS+ GWEEAQKNWVEMWKE
Sbjct: 121 EQKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKE 180

[Close]

BLAST of CSPI02G10860 vs. TAIR 10
Match: AT5G52780.1 (Protein of unknown function (DUF3464) )

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-30
Identity = 74/176 (42.05%), Postives = 113/176 (64.20%), Query Frame = 0


Query: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTI-TNNLTNFTPTLSRGQVQVNAKGFTNSP 60
           M++L CS  + L LS+      +T   N  T+  NN   +   L  G      KGF +S 
Sbjct: 1   MRALLCSH-RLLPLSSLSRTTVKTKSHNPKTLYPNNKPRWESKLHAG-----PKGFQSS- 60

Query: 61  RTAKNRETTAQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLW 120
           RT++  +    + + +DD  IP+ V+ R++ RI+  VG P+  GV +LK+ + +K++N+W
Sbjct: 61  RTSE--KPGRPDPDPEDDPPIPQEVFERMMGRIVVSVGTPLGLGVAILKVLEVLKDRNVW 120

Query: 121 DVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEE 176
           DVP+WVP+ TT +TFG+S +GIAYG+LST+LDP K  S+ G +EA++NWVEMWKE+
Sbjct: 121 DVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMWKED 167

[Close]

BLAST of CSPI02G10860 vs. TAIR 10
Match: AT4G19100.1 (Protein of unknown function (DUF3464) )

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-19
Identity = 48/126 (38.10%), Postives = 73/126 (57.94%), Query Frame = 0


Query: 56  TNSPRTAKNRETTAQNNNEDDDDE--------IPEAVYSRIITRILAFVGIPMAFGVTLL 115
           +  P+     +    + +EDDDDE        IPE V +R+I+R+   VG+P+  G+   
Sbjct: 80  SKKPKPGNQSDEDDDDEDEDDDDEEDERERGVIPEIVTNRMISRMGFTVGLPLFIGLLFF 139

Query: 116 KIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKN 174
             F  +K     DVP WVPF  +F+ FG +  G++YG +S+S DP ++GS+LGW EA+KN
Sbjct: 140 PFFYYLKVGLKVDVPTWVPFIVSFVFFGTALAGVSYGIVSSSWDPLREGSLLGWNEAKKN 199

The following BLAST results are available for this feature:

BLAST of CSPI02G10860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTD9	5.3e-29	42.05	Uncharacterized protein PAM68-like OS=Arabidopsis thaliana OX=3702 GN=At5g52780 ...	[more]
O49668	1.5e-18	38.10	Protein PAM68, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM68 PE=1 SV=1	[more]

BLAST of CSPI02G10860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLM4	1.1e-96	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G213970 PE=4 SV=1	[more]
A0A5A7STB5	1.1e-80	87.57	Putative Sterol regulatory element-binding protein cleavage-activating protein O...	[more]
A0A1S3AZ57	1.1e-80	87.57	uncharacterized protein PAM68-like OS=Cucumis melo OX=3656 GN=LOC103484134 PE=4 ...	[more]
A0A5D3DHC5	6.9e-80	87.03	Putative Sterol regulatory element-binding protein cleavage-activating protein O...	[more]
A0A6J1CGP3	1.2e-63	70.43	uncharacterized protein PAM68-like OS=Momordica charantia OX=3673 GN=LOC11101150...	[more]

BLAST of CSPI02G10860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150568.1	2.2e-96	100.00	uncharacterized protein PAM68-like [Cucumis sativus] >KGN61652.1 hypothetical pr...	[more]
XP_008439311.1	2.2e-80	87.57	PREDICTED: uncharacterized protein PAM68-like [Cucumis melo] >KAA0033723.1 putat...	[more]
TYK23016.1	1.4e-79	87.03	putative Sterol regulatory element-binding protein cleavage-activating protein [...	[more]
XP_038877436.1	2.0e-73	80.65	uncharacterized protein PAM68-like [Benincasa hispida]	[more]
XP_022140980.1	2.4e-63	70.43	uncharacterized protein PAM68-like [Momordica charantia]	[more]

BLAST of CSPI02G10860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52780.1	3.8e-30	42.05	Protein of unknown function (DUF3464)	[more]
AT4G19100.1	1.0e-19	38.10	Protein of unknown function (DUF3464)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021855	PAM68-like	PFAM	PF11947	DUF3464	coord: 58..174 e-value: 6.0E-41 score: 139.7
IPR021855	PAM68-like	PANTHER	PTHR34575	PROTEIN PAM68, CHLOROPLASTIC	coord: 1..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..68
None	No IPR available	PANTHER	PTHR34575:SF6	EXPRESSED PROTEIN	coord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G10860.2	CSPI02G10860.2	mRNA
CSPI02G10860.1	CSPI02G10860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane