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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAAGAGGAAAGCGAAGAGGAAGTTCCTCTTAAGCAAAAGAGAAGTAGGAAACTTTGCAATAAAAAAAAAAAGAAGCTTCTTAAGGTCAAGGACTTTCAGAACCCACTGTCTCTCGCTGTCAGCGACCCTCTCTCCACCACACCAACAAGCTTGCCCTCAAACTCCAAAACCATCAAACAGAAAGATATTCTTACAACCCCTCCATCATCAGCCAAATTAACCAAGTCCCCACCACAGTTTGAGAGATCCAAACTTCAGAACCCAAGTCATCAATCGTTCCTAAAATCCAAATGA mRNA sequence ATGAAAGAGGAAAGCGAAGAGGAAGTTCCTCTTAAGCAAAAGAGAAGTAGGAAACTTTGCAATAAAAAAAAAAAGAAGCTTCTTAAGGTCAAGGACTTTCAGAACCCACTGTCTCTCGCTGTCAGCGACCCTCTCTCCACCACACCAACAAGCTTGCCCTCAAACTCCAAAACCATCAAACAGAAAGATATTCTTACAACCCCTCCATCATCAGCCAAATTAACCAAGTCCCCACCACAGTTTGAGAGATCCAAACTTCAGAACCCAAGTCATCAATCGTTCCTAAAATCCAAATGA Coding sequence (CDS) ATGAAAGAGGAAAGCGAAGAGGAAGTTCCTCTTAAGCAAAAGAGAAGTAGGAAACTTTGCAATAAAAAAAAAAAGAAGCTTCTTAAGGTCAAGGACTTTCAGAACCCACTGTCTCTCGCTGTCAGCGACCCTCTCTCCACCACACCAACAAGCTTGCCCTCAAACTCCAAAACCATCAAACAGAAAGATATTCTTACAACCCCTCCATCATCAGCCAAATTAACCAAGTCCCCACCACAGTTTGAGAGATCCAAACTTCAGAACCCAAGTCATCAATCGTTCCTAAAATCCAAATGA Protein sequence MKEESEEEVPLKQKRSRKLCNKKKKKLLKVKDFQNPLSLAVSDPLSTTPTSLPSNSKTIKQKDILTTPPSSAKLTKSPPQFERSKLQNPSHQSFLKSK*
Homology
BLAST of CSPI02G07010 vs. ExPASy TrEMBL
Match: A0A0A0LMN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G073040 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.4e-05 Identity = 37/51 (72.55%), Postives = 39/51 (76.47%), Query Frame = 0
Query: 26 KLLKVKDFQNPLSLAVSDPLSTTPTSLPSNSKTIKQKDILTTPPSSAKLTK 77
K LK +D + SDPLSTTPTSL SNSKTIKQKDILTTP SSAKLTK
Sbjct: 3 KRLKTRDEEQ------SDPLSTTPTSLSSNSKTIKQKDILTTPLSSAKLTK 47
BLAST of CSPI02G07010 vs. NCBI nr
Match: KGN61241.1 (hypothetical protein Csa_006052 [Cucumis sativus]) HSP 1 Score: 58.9 bits (141), Expect = 2.8e-05 Identity = 37/51 (72.55%), Postives = 39/51 (76.47%), Query Frame = 0
Query: 26 KLLKVKDFQNPLSLAVSDPLSTTPTSLPSNSKTIKQKDILTTPPSSAKLTK 77
K LK +D + SDPLSTTPTSL SNSKTIKQKDILTTP SSAKLTK
Sbjct: 3 KRLKTRDEEQ------SDPLSTTPTSLSSNSKTIKQKDILTTPLSSAKLTK 47
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LMN3 | 1.4e-05 | 72.55 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G073040 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN61241.1 | 2.8e-05 | 72.55 | hypothetical protein Csa_006052 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 40..98 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..23 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..15 |
Relationships
The following mRNA feature(s) are a part of this gene:
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