CSPI02G06710 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G06710
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	26S proteasome regulatory subunit RPN13 isoform X1
Location	Chr2: 5508489 .. 5520002 (-)
RNA-Seq Expression	CSPI02G06710
Synteny	CSPI02G06710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAATACAGCGGCTTGGCATCTCTTCGAGCTTTTACACCTTCCTATTTAGAACAAAACGAGAAGGAAATAAGAGAATAAATATCTCAATCTACAAATTCAGTGCTCTCTTCCTCTTCGGGTTCCCATTTTCCAACTACTTTCTCTATCGATTTCTTGGTATAATCATCTCCTTCCACCTTTACGATTCATTCGTTTTCACCTGTTTCGTTGCTCAATCTTTTTTCATTTCAACCCTTAAAAGGGTTTCTTGTATTATGAGGTTTAGTTGATTTGATATGCGTACTTCTTTTTTTTTTTTTTTTTTTTTGTTCAAACTTTATTGGGTTTGTGTGTTTCTTTAATTGGATTATTTGTTTTTAAGTTTCTTTTGCTCTGTGGTAGTTCTCTTGTTGTTGGAAGTTGAATTGAATAAGTGAAGATATGGACTCGTCGTCTACAGAGGCTGTTCCAGAAATGCAGGTAAAATGTTTAGGCTTCTTATCCAATGTATTTTACAGTACATGTACGTATTGCTATCATAACATTGATTCGTTTTGCGAGTATATACTTGGAAGCAGGGAGAGGTAGGGAGTCTATCCTGCTGCATGTTTAACTTCTGTAAATAAATTTTCAGTTTGATCATTGGAGCTAATTTTTATCGACGAATTACTTTGATCGATAACGTCTCTATTAGGGAAAATGATAGAACAGAGGCTGCCTAATATGAAGAAACTGTGGGAGTCTGTTTTTATTACATTGGTCTTCCTCTGGGCAGTAATCCTAAATCTTTAGTTTTTTGGGATCCCGTGGTGGATAAGTTAAAGAAAGACTTGCCTCATAAAGAAGGGTTTCTTTTTAATATATGGTTGGCTTACCTTAATCAGGTCTATGTTGAGTGGTATTCCGGCGTATTCTTTTTCTTCTTCAGAGCCCGTGGGAGGTTTCAAGCTTTTGGAAAGGATGATGCCAATTTCCTTTGATAAGGAGAGGAGGAAGGAAAAGGTAAAGGATCAACGATCACAGTTGTTAGGTGGGAGATCATTGAGAGGCAATTGAGTTTGAGGAGTTAGAGATCAAGAATTTTAGGCTTCGTAATAGATCTTTGTTAGCTAAGTAGTTGTGGTGGTTCCACCTTGAGCATCTTTGCAATAAGAATATTTCTAGTAAACACGGTCCTCATCCTTTTTAAGTGGCTGACGAAAGGGGTTAAAGGCATCTAACGGAAATTGTGGAAGGATGTTTCCAATGAGCTCCCTTCTCTTGTTCACATTGTCCATTATGTGTTGGTAGAAAGGAATAACATGTACTTTTGGGAAGATCAGTGGGTGGAGGATATGCCTTTTTGTTCTTTATCTCTTCATCTTTACCTTTTTTCTTCCCTTAAAAATCATCTTGCGTCTGATTTCTTGGTTAGGGATGGATGATAGGTGCTCCTGTTCATTCTCTCTTCGATTGGGAAGTGACTGGCGTAACCTATCTTTCGTCTTTACTTGAGGGTTACTCTTTTAGGCGTGGGAGAAGGGATTTGAGGGTCTGGAGTCCCAATCCTTTGGAGGGATTCTCTTGCAAGTCTCTTTTTAGTTGTTTGTTTGACCCTTTTCCCCTTGATGAGTTGGTCTTTTCTGTGCTGTGGAAGATTGAGATCCTAAGGAAAGTGAATTTTTTTACCTGGCAAGTCTTGCTCGGCCAACATGATGGATCAACTTGCTAGGAAGCTTCCCTTGCTTGTTGGTCCACTTCGTTGTATTATCTATTGGTAGGCAGATGAAGACTCGAATCATATTCTTTTGCATTGTGAATTTGTGAGAGCTGCCTGCGATTCTTTTTTTTTTTCAGACACTTAGGTTCCTACTTGTTTGGCATGGTTACTAGTGAAATGATTGGGGAGTTCCTTCTTCATCCGCCTTTTCGTGAGAAGAGACGCTCCTTATGGGTGGTGGGGGGTGGACCGTTCTTTGGGTTTTCTGGGGGGAGTGGAATAACAAGTTGTTTAGGGGTTCTAAGAGGGGTTCTTTTGAGATTTAGTCTCTGGTTAGATATGTTTCTCTTTGGACTTTGGTTTCGATAACTTTTTTATTACTACTCTTTAGGCCCAATTCTGTATAGTTGGAATCCCTTCTTCTAGGGGGGCTTCCTTTCTCTTTTGATGGGGTTGATTTTGTTTATTCCTGTACTGCTGTATTCTTTCATTTTTATCTCAATGAAAATTGTTTCCTAAAAAAAAATCATAAATTCAACAGAAAGAAAATTATTCACATAAAAAAGCTTAGGATTGTTTCTCCTAAAGAAATAATACAATAATTCTGGATAGCCAGTCTACTAGAATCATTTATATTTATATTCTCACTTTTTATTTTGGCTAACATTTTATTTGTCCCAAATTAATCGATCCTGTGGCAGGAAATACTTCTGGAGTTTCGTGCTGGAAAAATGTGTTTTGAAGGAAAAAGGGTTGTACCCGATACACGCAAAGGACTTGTTCGTATTGGAAGGGTGAGTTTGAACTTTTCATGTTTATATAATCTGATCTTTCTGTTATATGTTAATTGTGGAATTGGTTTTCTTTAGAGCATTCTACTGCTTCGCCATATACAAAATTTTGCATTTGGTTTCTTTTTAAGAGATTGTATTCTCAGTTGTCCAAACTTATGATACACAATGGCTTTAGAACCAAATTTTGGGCTGTTGTATGGGTTGGCAGCTGGTTGGTTTATTTATTGTGTCTAATTTTTTTTTAGTCCTTTTCCCTTTAGCTTTCCTCATATACCTCCAATGTCAAGTCTCTTACCCATCATTAAAAACGTGTGCCTGCTATGAACCTAAGACACCACCATGTCGAGTCCCCTTACTTGTGGCTTTTGATTCATAATACTCTCATATATCCTATCTTTCGGGACAAATGAAGGGTTCTTTGGCAGGATTGTATCTTTGGAGTGTATTGGGGCTTATTGTTTGTGATGATTGGGCATACTGATGTTAATGAGAGAATTTTATTAATGTTTTGAAGTTCTGAATACAAGAAGACAAGTACTCTATTTATAGGAAACTAATCCAAATCCTAATTAATAAAAGAAACTAACCCTTAATCCTAATAAATAAAAGAAACTAATCATAATCCTAATAGATTAAGGATTACACCATAGTATCCTATTCCTACAACATCACATGCTTTTATCAGTTTATGGGTTTGGAGGAATTTGAGATTGAAGTGTGGGATATTATGATATTTAATGCCTCATAATGGGCTTTGGTCCCTCCCCCTCTTATAGATTATTAGGTAGGTATTTTTCTCTTGGATTTGAGTTGATTTCATAGTTAGTACCATTTTTTAGTGTCTGAGCAAGCTTATGTGCATCTCGACTGATCTCACAGGACAACCTGCCTAACTCTACAACATTTAGGTGTCAAGAAAACTCATATGATTTAATTTCTAGGAAGATGGTCACCCTAGATTGAAACCATGACTTCTTGGCCCTTTATGGAGGCAACGTCTCCTTTTTTACCATCGGGCCAATCCATGATGGTTCATTTCATAGTTAGTATTGTCAATTATGACTTTACTCTTTTTTGGAAGGGGGCGATTCTTTTTATACCTACGTATAATTTTCCTCCGTGAAAGCATTCTCATTGTTGTTGTTTTTTACAAAATACTACATGTTGAGCTGGAGGTATTAGTCCTTCCCTCCAAGTTTGTCATCTTTTTCAAGAAATTATATGTAGCCTCTCTTGGGAATTGGGAATTAGAGAAGAAAACATATCGTTAGATGGCGTACTCGGAAGAACCAAGCACTGGAAAGGACTAAGCATATCAAAATCAACTTTCCTCCACTTTCCTCCACCTCCCTCCATATTTTTAACCATCATAGGTTGGTCTCGTCTAGTAGTAACCAAGGAAACATAGACTCAATAACTAATTAAGAGGTCATGGGTTCAATCCATGGTTGTCATCTACCTAAAATTGATATGACTCCCAAAAGTTTGTTTAGGATTTAAATTGATACAGTTATTAGTTTGTGATTAAAATTGATACGACTCCCAAAAGTTCAAGGTTAAAATTGATACAATTATTAGTTTAAGGTTTAAATTGATGCAAACCCCAAAGTTCAAGGGTATAAATTTTGAATTTTTCCCTTCAATAAATTTATTTGCCTTAGCGTTGTCATGTATGAGTGGATCTGTTTTAATTATGTTTTCCCGTTGAACCTAATCCTTCATAAGATTAAATTAAAATTTGGACCTTGTTTTTATCTTTTCATACAGGGTGAGGAGGGATTGCTGCACTTTCAATGGATTGATCGGACGCAAAATGTCATTGAAGATGTATCCTGATCGTTATTGTGTTAATGGTCAATTCTTTGTGTTTGGTTAATGCATGTACCTTTCAAAGATCCCAGGTTGATTATTTCTTTTGGTTATTAACTTAAGAATGTATGGTTCTAACTCGAACATTTGATTCACTTGACTTTTAAAGCCTCACCCTCGCTAAAAAAAGGACAAAAGATAAAGGCAAGTTGAAAAGAGTCCTACTTGAGAGAATACAAAAAAAGAGAGGGAGAACAAATTGTATATAGATAAGTCCAGCAGTGCACCTACTTTTTGAGCCTAATGATGAGATTTTCTCTTTCTTCCCCCGGTTAATTAAACTTCATGATGAAATACTCTTCTTCTACACACACACACGCAATTCCATCATTAAATATTATGATTTCTGATACGTCATGGTTGAAATTGAAATGCAATGGAATGACAATGAACTATGCTGGATCATCATTGTGAACAAACTCTTGTTAACAGAAGTAGATAGTGGGCTGGCTTTTTCTGCAAGCAATGAAAATGATCTTAATTTTAATTTCTTAATTTTTTATTTGTGTTTTTCATGGAGTGGTTGATACATTCTGTTTATGATGGCTTTTGTGTTGACAGCACCGTATTTTTTTTATTCGTATATTCATTAAACTTTATTTTTCGATGGACGGTATGTTCTTCCAAATGCAAGGATGTCAAAAAGTTATAAGATCATATTCATTATGCTGTTGCATCTGACTCTTCTCTATTCCACAGCTATGACTTTTTTCTGTTATTGCCATTTTACTGGCTAGATTTTTTTCTTTATTTTCCTTAATACGAGGTATACAGGATCAGATTGTTTTTCCTGATGAAGCAGTTTTTGAGAAGGTGTGTAATACTCTCTCTGTCTCTCTCTGTCCCTTAAAAAAGCACTAATATCATTAAAGAAATTGGAAAAACTATACAAAGAGGGGAAATTGAAGAACTAAGAGTGCATCCTAACTCAAGAGGCTGAGGATCTCCAATCAAGCAGTAGTCGGAAAAGAAGAGAGTTGCCATACCTTTCTGCAGTTAGATGCTTCTAGAGATACGTTAAGACATGTGTTTCGATGCACCCTTATGTTTACATCTATAGCAAACAATTCTTCCATCTCTCTAGTCTCTGAAGAGACCTCCGACAATGCTGCCATAATGAACTTGCTGAAAAGTTCAAACAACTAATCTCCCCACTTCTATAGAAACAGAGGTGATTGATATTTTCTTTGGTTGGTCAACTCCTCTCCCACAGAACATCCAAACCACACTGAAAAGTTCAAACAACTGATCTCCTACTTCTATGATCGCAAGCATTGAACAGAGAGATGATTGATATTTTCTTTGTTTGGTCAACACCTCTCCCACAGAACATCCAAAACCTACTCTTATATGTTCTCATGGGCCACCCTTTCAACAAACACAAGAAAATCATGTGGTCAGACCTAATTCGAGTGTTTCTATGGCTCTCTGTCCAAGTCCATAGATTAGTGCAGGGAGCCATAGAAACAACCACATCTTCAAGGATAATAAGAAATCATTTGAAGCAATCTTGGAATACCCTATCTAGTTAGCTATGACATGGTGCAAATGTACTTTTTTGAATTCGTCTGATCTAACATCTCTTATAACCAATTGGAGAAATATTATGTAACTGCTTTGGCTCTGGACATGTTGCCCACTACGTATTTTCATTTATCAATGAAAATAATTTCTTATAAACAAGTATATTTTCCTCTTTTATAAGGACGTGCATGCTCTGATTGAACAAGGTGTATCTTTGACTTTGAATCTACTTGTTATTTAGCATTGTGATTCCTGTAGAACACCAATGTCCTAACAAAGAGATTCAATCTATTGGGGGGCTTTGGATTTCTATCTATAGATTAGCGTAGGGAGTAACACATTGATGCTATGCCCTAGGCCCCTATACCAATTTTTCATAATGATTTGCATGAAAACACACTCGATGCTTCTAACAACCATAATCTTAATCTCAAGTCATGTCTGGAGTGATGTAATCTACCCCTTCCTAGATTATTAGAATTGGTGGCTGCATCTTCAGTTATCCTCTCATTCATATTTCTTTAGAAACTCAAAATTCCAAGATGTGATTAGCTCTATTCGAGTGAGCGGAGTGTGAATAGAAGAAAATTTAATGGAGTAGCTACATTTGTGACAATAAGAGAGGGATTTTGTAATTCCTTTGACTTATTTGCATGTTTCATTGTTCCAATGAATGTCTTGTTAGTTATGTAATAGGAAGGGTGCTAGTTCGTGAAATAACTCCAGTCATTGTGAATGCTTTCTGGATTTTAGTTACTCCAACCATTGACAATGACTGTTTCACATTAGTACTTTCTTCGAGGAATCTCCAAATATCAATAATTAATATGTCACTTCTAAGCTATATTTGAAGTCATCTTACCATGTTAATGTTCCCACAATGACCTTAACTATCATGAAATCAATAAATGGCTTTTTAAGGGCAAACGAAGCTTTCAAATAATGAAATAATACATATGAATGAACAAAAGTAACCCTAGAAAAGGATTTCAAACCGTAACTACAGAAACAGACGCTGATTCAAAAGTACTAAACCAAATTGATAATTACAAAATGCTCAAGAAAACTGACTTTACAAGATGCTGAAGAAACCAATAAATGATAATTACAAAAAAAAAATTGTTACATTTTCATTCATGGTTAAAATGGTTGTTTGCCTGCTTCAGGTCAATCAAGCTTCAGGAAGAGTTTACTTATTGAAGTTTAAAACAGATGACAGGAAGTTCTTCTTTTGGATGCAGGTCAGCATCTCTGTATTACTTTTTGTTCTTTTAGAGAGTTGATTTATATTCTAATATTTTCACGATTCTGACTGCGTTGGACAAATTGTAACCAGGAGCCCAAAGCTGAAGATGATCAGCAGTTGTGCATCTCTGTTAATGACTACATTAATCGGCCACTGGGTACTTCCTAACTGTTATATTTGTTCAAGTATCTGCTGGATGAAGCTTGTAGTAATAACTTCCTAACCAATTGTGCTGGTTTAAGTGCAGGCTTGTATTTGTGATTTTCTTTTACATGCTTGCTTTACGTGCATACGTTCACATAACACGCTTATATTACTGAAACAACTGTTTACCTTTCCAAGGTTTCTTAATCTTGTAATGATTATCATTAATATATATGAACCTAAATAAACATGCAAAAGGAAAAGAAACCACATAAATATCGTGGAGATTATCTTTCACTGACAGCCGTCCTCGTTGCATATGGAGTGTGAAATTTTAATTCTGGCTATCCAAAGGAAAGCTTTGGATAGTCAGTATCAAGCTAGATTGGCTCATTCGAAACTGCTCGTAGTTGTCCATCCTCTCAAAGATTTTCATAGATTACTTTGCCTCACCTGTTTTTACTCTTTATATAACTTTCTCGTATTTTGAGCATTATTATCATTAATAAAGAAGTTCGTTTCCATTTCAAAAAGAAATATTAATGCTGCCATTAAAATGACGTAATTGTTTACTTTAATCAAGTTCATCCCATGATGAAACTGGAACCTAGTGGCACGCTTGCTGAATTTTTTTTTAATCACGCCGATTTAATGGTTTGGTCTTGAGTTTTGACTGCAGTAGATTACGGAGGAGCTGCTTTATGCTTTGTTGGCTCACCCCATTACCTTTATTTTTGTTTATGTTGTTTCAGAGTTTCTTGAGGAAGAAGAACCTGTTGCTTCCACTCCAATGCACGTTTCAGAAGGCACAGTCGAAGAAAACATCCCATCGAGGTATAGTGAGGACCCTCCTTTTTTGGTTTAATTGAACTTTTCTAAAACCCTTTGGATGCTGCAAATAGTTTTTCTTTGGCTTGATACTACCTAGCTGCACGTTCAAGTACAAACATAGCACAGTTGAAGAAAAATATCCCATCAAATTATTGCAATGATCCGCATTTCTTTGTTGACCCTTTTGATTTCAAATGGTTTAGGTGGTACTAGCCCTAGTTGCACCTTCGAATGGTTTTTAAGTGGTCAAAAAAATAATTTAAATTATTTTTTTGATAGAGGAAGCTTTTCCAAAAACAGTTTTCTACTAATGGGAAATGGTTGCCTGATCCGGTGGGATTCAATTGAAATCAAACTTCTAGTGACAGTACTCGGTGGAAAGATTGAGTTTGACTTTTTGAGAGTACTGTGTTTGGGTAAAGTATTTTTTTAATGAGCACTTAGGAAGCTTTAATGAAACGGTTCCTATAGCTGCTTGATTCGGCAACTAAGTAATGTGAAAAAAAATTTAATTTGAAATGCATTTGATCCATTGAAAGCACCTGTCATCAATTCCTAAACTCATAATCTTCACATAACCTCTTCTTAAAAAAGAGTATTTTAAAATAATTCATGTGCCAAACTGTGATTGGACTATTGTCCCTTCGGGGGGACATTTGATTAAGTTGGAACTGTGATTGAACTATTGGTTGGGGGGCACGAAGATGAGTACAACCTGAAAGCACCCGAACATTTTTCTTAGAATAAATGTCATTGTTAAAATGCAGATGCACTGAGAAAGAAACAAAGTATCAAGAAACATTTATCCCATTATTGCTGCATTTTGCCAACAAAAGCTTTTATCTCAACTGGCATCTGCATCTTTGTTCGAAAAAACAAAGAAGTATCAGAAAATACTACAATCTCTTAGTTTTTTCAGAAGCTAATTAAAATGACTAATGAGTTGGAACAATATTTATTGCTTAGGGACTATTGTTTTCAGAAATAATGTTGGTTTCGCTTGGCAAAAGGTTACTGTACAAAATTTTTCCTCCTGTTTACTTGGTTGGATATTTTCACCTGCTGTGTCTTCCTTTTCCTTTCTTCCCCCATTAGCTAAATTTATGATAGTAATTTTTTATGTCATGACACTGAAGCTCCTCACTACGGCCAGTGAAGTTGGAAGACCTGCAAAGGATTTTAAGTAACATCGAGCCATCTGGTATGTCGTTCCCCTCAAACATGTATTGATTCTCTTTGTTCATTTTGATAACTCCAGAATCTAATAATTTTGCTGCTTTTTTAAACTCAGCAGATATTGATGTCGATCCAGATGCAGGTAATATTTCCATACGAAAATGCTCACATTTTTTGTATCAGATATGTAGTAGTATTTATCTAGGAGAATTTCTCTTCTTCGCAGAAATCCTTTTTTGTTTACATTGTAAATATTCAACTAAATCCTGTTTTAGTTAAGAAAAATATTTCATTAATAAATAAAATTCACAAGACCAAAGCCGCATAATTAAATGAGTTTTTTCCATTGGTATAAATCTAAGAATGGTCAAATAAGACTCTATAGAAGTATCTACTAGAAAGACCACAATGAGATTCAAATGCCTATTGGGAGAGAAGAAAAAAAAGATGACCACAATGCATGTAGCTGCAGAAACTTAAATTGTATCTTTTTTCCCTTCACTATCCACTCCTTAAAAAACTGTTCTCCTCTCTTGTCAAGTCTCCTGAGTGAAACTAATGCCATTCAACTTTAATCAGAAAATCTTAGCCTTGATATATAAAATGAACATTTCCGTACAAATTTGTAGCTTAATGCTTACACTTCCTTGATGATGTAGGTTTTGGATTAGGAGATTTATTGAAGCCTGATCTGATAATGCCAGTGCTGGAAACGTTACCATTGGAACAGAGTTTAGCATCATATTTGCCGGAGGCATGTACCATTTTGGTATTTGATGATCCCTTGTGATATGTTTTTTTTTTTTCATAATAATTGTGTTCGATTTCAGGGTCCATGGACTCCTGAGGATATATTGGAGCTGTTACAAAGCCCGCCCTTCCGTCAACAAGTAGATTCATTTACTTATGTAATATTCTAAACACTGAATTTTGGTTTCTTATACAATCAATAATTTGACGCTTCAAATTTTCTGATCCGATCTCATGTTTTTCCTAGGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTTGGAATAGACCCGAGCAAATGTAAGTAGATTTTGCTTTACAAAGGCCTTTTGGTTTTTCGGTTGCTAATTGCTATGTCTGGGTATCCTGAAGGTCCACTCGTTTCTTCTTGGGGATCTTTAGTAATAGTGAACTTGAGGGGTGTCATTAGAAGGTTGAAAATGAATGCAATAGGTTTAGTAATAGTGAACTGTAGGGTCTCTTTTGTATGCAAATGAATGCAATAGGTTTGGTGAAATTTTGTTTTTTTTAAGACTGTTTTTGGATCATGTAAGACTAGAAATTTAAACTTTATATTTGATATTTGGAAGATGAAGAATTACACTCCATCGACAAAAAAATACTTTTTCGTGTTATAAGCTTTTTTTTTCTTAAAATAAAATAGCCGTAACATGATATATTTTAATTAATATAGTGCTGTAAAATATAATTTAAAAAAAAAAAACACAAAATGTGTTAATAAATTCATCAATAACAATTTAGATTGAACTAATTGGTAACTTTGACTCTATTATTGTTTTTGAACATATAAATATTGCTAAATATACTTTGAAAAACTTTTTGTTTGTTGGAGTCAGTCACGGGATGGCTGAAGCCTTCTGAGATATCCCAAGTTCTAGTTTGTCTTTACAAGAAATAGTGACACACGACTTTACTTGAACAGAATCTGTTCTAGAAGTTGTAGAACTGTGTCCTCGAGTTCTAACAAGAAATAGTGATACTGATGCATTTACAATCTTGGTTTTCAGTCCTATTCAGTCTGCTCTAAAATATGTATGCTGACATTTAAAGATTCTCTGGTTTCTTGCAGACAAATTTACGGTATTGTCTTTTCTTGATGCCCTTGAGGATTCTGTTTCAAAAACGTCAAGTTCGGAGCTGGAGCAGGATAATAAGGATGTAAGATCCCAATCCTTCAACCGTAGTGACTCGATGGATGAATCATAGTAAGAAGATATTCTAATTCTGTGTTTGCTAATCAGTTACCAATCTCATTGTTTTTTTTATTGGCAAAGAGAAGGTTGCTTGACATTTCTTGTATACCTTAGAGAGGAAGAACTGGAATTGCTTGAGTAACCAAAAGTGCGGATTTTTATCTGGATTCTTATATTTGATCTGACAATAATATTAGTTTCATATCGATTAATCTCGTTGTAAGTTCTTCAGTTTTTGGAGAGTTTAATTGTATTTTGTCAAAAGTATAGTTTCGTTACTCCC

mRNA sequence

AACAAATACAGCGGCTTGGCATCTCTTCGAGCTTTTACACCTTCCTATTTAGAACAAAACGAGAAGGAAATAAGAGAATAAATATCTCAATCTACAAATTCAGTGCTCTCTTCCTCTTCGGGTTCCCATTTTCCAACTACTTTCTCTATCGATTTCTTGTTCTCTTGTTGTTGGAAGTTGAATTGAATAAGTGAAGATATGGACTCGTCGTCTACAGAGGCTGTTCCAGAAATGCAGGAAATACTTCTGGAGTTTCGTGCTGGAAAAATGTGTTTTGAAGGAAAAAGGGTTGTACCCGATACACGCAAAGGACTTGTTCGTATTGGAAGGGGTGAGGAGGGATTGCTGCACTTTCAATGGATTGATCGGACGCAAAATGTCATTGAAGATGATCAGATTGTTTTTCCTGATGAAGCAGTTTTTGAGAAGGTCAATCAAGCTTCAGGAAGAGTTTACTTATTGAAGTTTAAAACAGATGACAGGAAGTTCTTCTTTTGGATGCAGGAGCCCAAAGCTGAAGATGATCAGCAGTTGTGCATCTCTGTTAATGACTACATTAATCGGCCACTGGAGTTTCTTGAGGAAGAAGAACCTGTTGCTTCCACTCCAATGCACGTTTCAGAAGGCACAGTCGAAGAAAACATCCCATCGAGCTCCTCACTACGGCCAGTGAAGTTGGAAGACCTGCAAAGGATTTTAAGTAACATCGAGCCATCTGATATTGATGTCGATCCAGATGCAGGTTTTGGATTAGGAGATTTATTGAAGCCTGATCTGATAATGCCAGTGCTGGAAACGTTACCATTGGAACAGAGTTTAGCATCATATTTGCCGGAGGGTCCATGGACTCCTGAGGATATATTGGAGCTGTTACAAAGCCCGCCCTTCCGTCAACAAGTAGATTCATTTACTTATGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTTGGAATAGACCCGAGCAAATACAAATTTACGGTATTGTCTTTTCTTGATGCCCTTGAGGATTCTGTTTCAAAAACGTCAAGTTCGGAGCTGGAGCAGGATAATAAGGATGTAAGATCCCAATCCTTCAACCGTAGTGACTCGATGGATGAATCATAGTAAGAAGATATTCTAATTCTGTGTTTGCTAATCAGTTACCAATCTCATTGTTTTTTTTATTGGCAAAGAGAAGGTTGCTTGACATTTCTTGTATACCTTAGAGAGGAAGAACTGGAATTGCTTGAGTAACCAAAAGTGCGGATTTTTATCTGGATTCTTATATTTGATCTGACAATAATATTAGTTTCATATCGATTAATCTCGTTGTAAGTTCTTCAGTTTTTGGAGAGTTTAATTGTATTTTGTCAAAAGTATAGTTTCGTTACTCCC

Coding sequence (CDS)

ATGGACTCGTCGTCTACAGAGGCTGTTCCAGAAATGCAGGAAATACTTCTGGAGTTTCGTGCTGGAAAAATGTGTTTTGAAGGAAAAAGGGTTGTACCCGATACACGCAAAGGACTTGTTCGTATTGGAAGGGGTGAGGAGGGATTGCTGCACTTTCAATGGATTGATCGGACGCAAAATGTCATTGAAGATGATCAGATTGTTTTTCCTGATGAAGCAGTTTTTGAGAAGGTCAATCAAGCTTCAGGAAGAGTTTACTTATTGAAGTTTAAAACAGATGACAGGAAGTTCTTCTTTTGGATGCAGGAGCCCAAAGCTGAAGATGATCAGCAGTTGTGCATCTCTGTTAATGACTACATTAATCGGCCACTGGAGTTTCTTGAGGAAGAAGAACCTGTTGCTTCCACTCCAATGCACGTTTCAGAAGGCACAGTCGAAGAAAACATCCCATCGAGCTCCTCACTACGGCCAGTGAAGTTGGAAGACCTGCAAAGGATTTTAAGTAACATCGAGCCATCTGATATTGATGTCGATCCAGATGCAGGTTTTGGATTAGGAGATTTATTGAAGCCTGATCTGATAATGCCAGTGCTGGAAACGTTACCATTGGAACAGAGTTTAGCATCATATTTGCCGGAGGGTCCATGGACTCCTGAGGATATATTGGAGCTGTTACAAAGCCCGCCCTTCCGTCAACAAGTAGATTCATTTACTTATGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTTGGAATAGACCCGAGCAAATACAAATTTACGGTATTGTCTTTTCTTGATGCCCTTGAGGATTCTGTTTCAAAAACGTCAAGTTCGGAGCTGGAGCAGGATAATAAGGATGTAAGATCCCAATCCTTCAACCGTAGTGACTCGATGGATGAATCATAG

Protein sequence

MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSDIDVDPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMDES*

Homology

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BLAST of CSPI02G06710 vs. ExPASy Swiss-Prot
Match: O48726 (26S proteasome regulatory subunit RPN13 OS=Arabidopsis thaliana OX=3702 GN=RPN13 PE=1 SV=2)

HSP 1 Score: 363.2 bits (931), Expect = 2.8e-99
Identity = 190/299 (63.55%), Postives = 225/299 (75.25%), Query Frame = 0


Query: 4   SSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIE 63
           SS+EA P MQEI+LEFRAGKM  +G RVVPD RKGLVRI RG+EGL+HFQW+DR QN +E
Sbjct: 2   SSSEAFPVMQEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVE 61

Query: 64  DDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRP 123
           DDQIVFPDEA+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LC SVN Y+N+P
Sbjct: 62  DDQIVFPDEALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYLNQP 121

Query: 124 LEFLEEEEPVASTPMHVSEGTVEENIPS-----------------SSSLRPVKLEDLQRI 183
           LEF   EE +A+      E   E+N  S                 +SS  PVKL DLQRI
Sbjct: 122 LEF-PGEEGLAAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADLQRI 181

Query: 184 LSNIE--PSDIDVDPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILEL 243
           L+N+   P  I  D D G  LGD+LKP+LIMP+LE LP+++ L+S+LPEG    EDILEL
Sbjct: 182 LNNLSGGPVGIAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDILEL 241

Query: 244 LQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQ 284
           LQSPPFRQQVD+FTYVLRTGQIDL+QFGIDPSKYKFTV SFL+ALEDSVS  S   +++
Sbjct: 242 LQSPPFRQQVDAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVSTQSRDAMDE 299

[Close]

BLAST of CSPI02G06710 vs. ExPASy Swiss-Prot
Match: Q6NZ09 (Proteasomal ubiquitin receptor ADRM1 OS=Danio rerio OX=7955 GN=adrm1b PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-36
Identity = 119/384 (30.99%), Postives = 169/384 (44.01%), Query Frame = 0


Query: 16  LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIEDDQIVFPDEAVF 75
           L+EFRAGKM  +G  V PD RKG V I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 22  LVEFRAGKMTLKGSTVTPDKRKGTVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEF 81

Query: 76  EKVNQ-ASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRP----------- 135
           ++VNQ  +GRVY+LKFK   ++ FFWMQEPK + D + C  VN+Y+N P           
Sbjct: 82  KRVNQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDDEYCRKVNEYLNNPPMPGALGSGGG 141

Query: 136 ---------------------------------------------LEFLEEEEPVAS--- 195
                                                           L    P  S   
Sbjct: 142 GGHELSALGEGGLQSLLGNMSHNQLMQLIGPTGLGGLGALAGPGLASLLGSGGPATSSST 201

Query: 196 ------------------------------TPMHVSEG--TVEENIPS----------SS 255
                                         TP   S G  TV    P+          +S
Sbjct: 202 SSSRSQSAAATPSSGSAARLSSTQAPTTPVTPAATSSGSPTVTPTTPAAQTPSLPAGPAS 261

Query: 256 SLRPVKLEDLQRILSNIEPSDIDVDPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPE 288
           S +P++L DLQ IL+ +    +  +  +G  L  +L PD++ P+L    ++Q L  YLP 
Sbjct: 262 STQPIQLSDLQSILATMNVPAMPTE-GSGVDLASVLTPDVMAPILANPEVQQRLLPYLPS 321

[Close]

BLAST of CSPI02G06710 vs. ExPASy Swiss-Prot
Match: A1L5A6 (Proteasomal ubiquitin receptor ADRM1 OS=Bos taurus OX=9913 GN=ADRM1 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-34
Identity = 110/386 (28.50%), Postives = 167/386 (43.26%), Query Frame = 0


Query: 16  LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIEDDQIVFPDEAVF 75
           L+EFRAGKM  +G  V PD RKGLV I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 23  LVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEF 82

Query: 76  EKVNQA-SGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRP----------- 135
           ++V Q  SGRVY+LKFK   ++ FFWMQEPK + D++ C  VN+Y+N P           
Sbjct: 83  KRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPPMPGALGASGS 142

Query: 136 -------------LEFL------------------------------------------- 195
                        L+ L                                           
Sbjct: 143 GGHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGLGGLGGLGALTGPGLASLLGSGGPPA 202

Query: 196 ------EEEEPVASTPMHVSEGTVEENIPS-----------------------SSSLRPV 255
                    +  A TP   +  T     PS                       +S  +P+
Sbjct: 203 SSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGDGASTAASPAQPI 262

Query: 256 KLEDLQRILSNIEPSDIDVDPDAG--FGLGDLLKPDLIMPVLETLPLEQSLASYLPEG-- 297
           +L DLQ IL+ +    +   P  G    L  +L P+++ P+L    +++ L  YLP G  
Sbjct: 263 QLSDLQSILATM---SVPAGPGGGQQVDLASVLTPEIMAPILANADVQERLLPYLPSGES 322

[Close]

BLAST of CSPI02G06710 vs. ExPASy Swiss-Prot
Match: Q98SH3 (Proteasomal ubiquitin receptor ADRM1 OS=Gallus gallus OX=9031 GN=ADRM1 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-34
Identity = 119/390 (30.51%), Postives = 174/390 (44.62%), Query Frame = 0


Query: 16  LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIEDDQIVFPDEAVF 75
           L+EFRAGKM  +G  V PD RKGLV I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 23  LVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEF 82

Query: 76  EKVNQ-ASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRP----------- 135
           ++V Q  +GRVY+LKFK   ++ FFWMQEPK + D++ C  VN+Y+N P           
Sbjct: 83  KRVPQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEHCRKVNEYLNNPPMPGALGGNAS 142

Query: 136 -------------LEFL------------------------------------------- 195
                        L+ L                                           
Sbjct: 143 GGHELSALGGEGGLQSLLGNMSHNQLMQLIGPTGLGGLGGLGALTGPGLASLLGSGGFPT 202

Query: 196 ------EEEEPVASTP------MHVSEG---------TVEENIPSSSS--------LRPV 255
                    +  A TP       HV+           T    +PSS S         +P+
Sbjct: 203 SSSSSSSRSQSAAVTPSSTTSSTHVTPAPAVPAAASVTSPSPVPSSGSGTSSATSPTQPI 262

Query: 256 KLEDLQRILSNIEPSDIDVDPDAG---FGLGDLLKPDLIMPVLETLPLEQSLASYLPEG- 297
           +L DLQ IL+      ++V   AG     L  +L P+++ P+L    +++ L  YLP G 
Sbjct: 263 QLSDLQNILAT-----MNVPSGAGGQQVDLATVLTPEIMAPILANAEVQERLMPYLPSGE 322

[Close]

BLAST of CSPI02G06710 vs. ExPASy Swiss-Prot
Match: Q6GN67 (Proteasomal ubiquitin receptor ADRM1-A OS=Xenopus laevis OX=8355 GN=adrm1-a PE=2 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 4.1e-34
Identity = 107/383 (27.94%), Postives = 172/383 (44.91%), Query Frame = 0


Query: 16  LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIEDDQIVFPDEAVF 75
           L+EFRAGKM  +G  V PD RKGLV I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 22  LVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGSVEDDLIIFPDDCEF 81

Query: 76  EKVNQ-ASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRP----------- 135
           ++V+Q  +GRVY+LKFK   ++ FFWMQEPK + D++ C  +N+Y+N P           
Sbjct: 82  KRVSQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEYCRKLNEYLNNPPMPGALGGSGS 141

Query: 136 -------------LEFL------------------------------------------- 195
                        L+ L                                           
Sbjct: 142 GSHELSALGGEGGLQSLLGNMSHNQLMQLIGPTGLGGLGGLGALTGPGLASLLGSGGPTT 201

Query: 196 ------EEEEPVASTPMHVSEGTVEENIP-----------------------SSSSLRPV 255
                    +  A TP   +  T   + P                       ++S  +P+
Sbjct: 202 SSSSSSSRSQSAAVTPSSTTSSTRTTSAPVAPAAAPATTPSPAVSSNDGASEATSPTQPI 261

Query: 256 KLEDLQRILSNIEPSDIDVDPDAG--FGLGDLLKPDLIMPVLETLPLEQSLASYLPEG-- 289
           +L DLQ IL+ +   ++    + G    L  +L P+++ P+L    +++ L  YLP G  
Sbjct: 262 QLSDLQNILATM---NVPATGEGGQQVDLASVLTPEIMAPILANAEVQERLTPYLPSGES 321

[Close]

BLAST of CSPI02G06710 vs. ExPASy TrEMBL
Match: A0A5D3C8P5 (26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00230 PE=4 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 5.2e-165
Identity = 298/302 (98.68%), Postives = 299/302 (99.01%), Query Frame = 0


Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSS EAVP MQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQW+DRTQN
Sbjct: 1   MDSSSIEAVPAMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSDIDVDPD 180
           NRPLEFLEEEEPVASTPMHVSEGTVEEN PSSSSLRPVKLEDLQRILSNIEPSDIDVDPD
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENTPSSSSLRPVKLEDLQRILSNIEPSDIDVDPD 180

Query: 181 AGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYV 240
           AGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYV
Sbjct: 181 AGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYV 240

Query: 241 LRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMD 300
           LRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMD
Sbjct: 241 LRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMD 300

Query: 301 ES 303
           ES
Sbjct: 301 ES 302

[Close]

BLAST of CSPI02G06710 vs. ExPASy TrEMBL
Match: A0A1S3BQP8 (26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492157 PE=4 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 5.2e-165
Identity = 298/302 (98.68%), Postives = 299/302 (99.01%), Query Frame = 0


Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSS EAVP MQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQW+DRTQN
Sbjct: 1   MDSSSIEAVPAMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSDIDVDPD 180
           NRPLEFLEEEEPVASTPMHVSEGTVEEN PSSSSLRPVKLEDLQRILSNIEPSDIDVDPD
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENTPSSSSLRPVKLEDLQRILSNIEPSDIDVDPD 180

Query: 181 AGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYV 240
           AGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYV
Sbjct: 181 AGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYV 240

Query: 241 LRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMD 300
           LRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMD
Sbjct: 241 LRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMD 300

Query: 301 ES 303
           ES
Sbjct: 301 ES 302

[Close]

BLAST of CSPI02G06710 vs. ExPASy TrEMBL
Match: A0A1S3BP07 (26S proteasome regulatory subunit RPN13 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492157 PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 1.3e-163
Identity = 298/303 (98.35%), Postives = 299/303 (98.68%), Query Frame = 0


Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSS EAVP MQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQW+DRTQN
Sbjct: 1   MDSSSIEAVPAMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPS-DIDVDP 180
           NRPLEFLEEEEPVASTPMHVSEGTVEEN PSSSSLRPVKLEDLQRILSNIEPS DIDVDP
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENTPSSSSLRPVKLEDLQRILSNIEPSADIDVDP 180

Query: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240
           DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY
Sbjct: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240

Query: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM 300
           VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM
Sbjct: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM 300

Query: 301 DES 303
           DES
Sbjct: 301 DES 303

[Close]

BLAST of CSPI02G06710 vs. ExPASy TrEMBL
Match: A0A5A7TXA8 (26S proteasome regulatory subunit RPN13 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00620 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 2.1e-158
Identity = 291/304 (95.72%), Postives = 293/304 (96.38%), Query Frame = 0


Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSS EAVP MQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQW+DRTQN
Sbjct: 1   MDSSSIEAVPAMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSD--IDVD 180
           NRPLEFLEEEEPVASTPMHVSEGTVEEN PSSSSLRPVKLEDLQRILSNIEPS   +   
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENTPSSSSLRPVKLEDLQRILSNIEPSAYCLHFL 180

Query: 181 PDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFT 240
            D GFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFT
Sbjct: 181 DDVGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFT 240

Query: 241 YVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDS 300
           YVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDS
Sbjct: 241 YVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDS 300

Query: 301 MDES 303
           MDES
Sbjct: 301 MDES 304

[Close]

BLAST of CSPI02G06710 vs. ExPASy TrEMBL
Match: A0A0A0LKE1 (RPN13_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070250 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 2.1e-158
Identity = 287/289 (99.31%), Postives = 288/289 (99.65%), Query Frame = 0


Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN
Sbjct: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPS-DIDVDP 180
           NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPS DIDVDP
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDP 180

Query: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240
           DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY
Sbjct: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240

Query: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDV 289
           VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKD+
Sbjct: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDL 289

[Close]

BLAST of CSPI02G06710 vs. NCBI nr
Match: XP_011648975.1 (26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis sativus])

HSP 1 Score: 597.4 bits (1539), Expect = 6.7e-167
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN
Sbjct: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSDIDVDPD 180
           NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSDIDVDPD
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSDIDVDPD 180

Query: 181 AGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYV 240
           AGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYV
Sbjct: 181 AGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYV 240

Query: 241 LRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMD 300
           LRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMD
Sbjct: 241 LRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMD 300

Query: 301 ES 303
           ES
Sbjct: 301 ES 302

[Close]

BLAST of CSPI02G06710 vs. NCBI nr
Match: XP_004152857.1 (26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis sativus] >XP_031737034.1 26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis sativus] >KAE8651692.1 hypothetical protein Csa_006084 [Cucumis sativus])

HSP 1 Score: 592.8 bits (1527), Expect = 1.7e-165
Identity = 302/303 (99.67%), Postives = 302/303 (99.67%), Query Frame = 0


Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN
Sbjct: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPS-DIDVDP 180
           NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPS DIDVDP
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDP 180

Query: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240
           DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY
Sbjct: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240

Query: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM 300
           VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM
Sbjct: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM 300

Query: 301 DES 303
           DES
Sbjct: 301 DES 303

[Close]

BLAST of CSPI02G06710 vs. NCBI nr
Match: XP_008450644.1 (PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis melo] >TYK08253.1 26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 590.1 bits (1520), Expect = 1.1e-164
Identity = 298/302 (98.68%), Postives = 299/302 (99.01%), Query Frame = 0


Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSS EAVP MQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQW+DRTQN
Sbjct: 1   MDSSSIEAVPAMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSDIDVDPD 180
           NRPLEFLEEEEPVASTPMHVSEGTVEEN PSSSSLRPVKLEDLQRILSNIEPSDIDVDPD
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENTPSSSSLRPVKLEDLQRILSNIEPSDIDVDPD 180

Query: 181 AGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYV 240
           AGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYV
Sbjct: 181 AGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYV 240

Query: 241 LRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMD 300
           LRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMD
Sbjct: 241 LRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMD 300

Query: 301 ES 303
           ES
Sbjct: 301 ES 302

[Close]

BLAST of CSPI02G06710 vs. NCBI nr
Match: XP_008450629.1 (PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis melo] >XP_008450636.1 PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis melo])

HSP 1 Score: 585.5 bits (1508), Expect = 2.7e-163
Identity = 298/303 (98.35%), Postives = 299/303 (98.68%), Query Frame = 0


Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSS EAVP MQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQW+DRTQN
Sbjct: 1   MDSSSIEAVPAMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPS-DIDVDP 180
           NRPLEFLEEEEPVASTPMHVSEGTVEEN PSSSSLRPVKLEDLQRILSNIEPS DIDVDP
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENTPSSSSLRPVKLEDLQRILSNIEPSADIDVDP 180

Query: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240
           DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY
Sbjct: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240

Query: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM 300
           VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM
Sbjct: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM 300

Query: 301 DES 303
           DES
Sbjct: 301 DES 303

[Close]

BLAST of CSPI02G06710 vs. NCBI nr
Match: XP_031737035.1 (26S proteasome regulatory subunit RPN13 isoform X3 [Cucumis sativus])

HSP 1 Score: 569.3 bits (1466), Expect = 2.0e-158
Identity = 288/289 (99.65%), Postives = 288/289 (99.65%), Query Frame = 0


Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN
Sbjct: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPS-DIDVDP 180
           NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPS DIDVDP
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDP 180

Query: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240
           DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY
Sbjct: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240

Query: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDV 289
           VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDV
Sbjct: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDV 289

[Close]

BLAST of CSPI02G06710 vs. TAIR 10
Match: AT2G26590.1 (regulatory particle non-ATPase 13 )

HSP 1 Score: 363.2 bits (931), Expect = 2.0e-100
Identity = 190/299 (63.55%), Postives = 225/299 (75.25%), Query Frame = 0


Query: 4   SSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIE 63
           SS+EA P MQEI+LEFRAGKM  +G RVVPD RKGLVRI RG+EGL+HFQW+DR QN +E
Sbjct: 2   SSSEAFPVMQEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVE 61

Query: 64  DDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRP 123
           DDQIVFPDEA+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LC SVN Y+N+P
Sbjct: 62  DDQIVFPDEALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYLNQP 121

Query: 124 LEFLEEEEPVASTPMHVSEGTVEENIPS-----------------SSSLRPVKLEDLQRI 183
           LEF   EE +A+      E   E+N  S                 +SS  PVKL DLQRI
Sbjct: 122 LEF-PGEEGLAAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADLQRI 181

Query: 184 LSNIE--PSDIDVDPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILEL 243
           L+N+   P  I  D D G  LGD+LKP+LIMP+LE LP+++ L+S+LPEG    EDILEL
Sbjct: 182 LNNLSGGPVGIAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDILEL 241

Query: 244 LQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQ 284
           LQSPPFRQQVD+FTYVLRTGQIDL+QFGIDPSKYKFTV SFL+ALEDSVS  S   +++
Sbjct: 242 LQSPPFRQQVDAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVSTQSRDAMDE 299

[Close]

BLAST of CSPI02G06710 vs. TAIR 10
Match: AT2G26590.2 (regulatory particle non-ATPase 13 )

HSP 1 Score: 363.2 bits (931), Expect = 2.0e-100
Identity = 190/299 (63.55%), Postives = 225/299 (75.25%), Query Frame = 0


Query: 4   SSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIE 63
           SS+EA P MQEI+LEFRAGKM  +G RVVPD RKGLVRI RG+EGL+HFQW+DR QN +E
Sbjct: 2   SSSEAFPVMQEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVE 61

Query: 64  DDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRP 123
           DDQIVFPDEA+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LC SVN Y+N+P
Sbjct: 62  DDQIVFPDEALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYLNQP 121

Query: 124 LEFLEEEEPVASTPMHVSEGTVEENIPS-----------------SSSLRPVKLEDLQRI 183
           LEF   EE +A+      E   E+N  S                 +SS  PVKL DLQRI
Sbjct: 122 LEF-PGEEGLAAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADLQRI 181

Query: 184 LSNIE--PSDIDVDPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILEL 243
           L+N+   P  I  D D G  LGD+LKP+LIMP+LE LP+++ L+S+LPEG    EDILEL
Sbjct: 182 LNNLSGGPVGIAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDILEL 241

Query: 244 LQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQ 284
           LQSPPFRQQVD+FTYVLRTGQIDL+QFGIDPSKYKFTV SFL+ALEDSVS  S   +++
Sbjct: 242 LQSPPFRQQVDAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVSTQSRDAMDE 299

[Close]

BLAST of CSPI02G06710 vs. TAIR 10
Match: AT2G26590.3 (regulatory particle non-ATPase 13 )

HSP 1 Score: 363.2 bits (931), Expect = 2.0e-100
Identity = 190/299 (63.55%), Postives = 225/299 (75.25%), Query Frame = 0


Query: 4   SSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIE 63
           SS+EA P MQEI+LEFRAGKM  +G RVVPD RKGLVRI RG+EGL+HFQW+DR QN +E
Sbjct: 2   SSSEAFPVMQEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVE 61

Query: 64  DDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRP 123
           DDQIVFPDEA+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LC SVN Y+N+P
Sbjct: 62  DDQIVFPDEALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYLNQP 121

Query: 124 LEFLEEEEPVASTPMHVSEGTVEENIPS-----------------SSSLRPVKLEDLQRI 183
           LEF   EE +A+      E   E+N  S                 +SS  PVKL DLQRI
Sbjct: 122 LEF-PGEEGLAAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADLQRI 181

Query: 184 LSNIE--PSDIDVDPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILEL 243
           L+N+   P  I  D D G  LGD+LKP+LIMP+LE LP+++ L+S+LPEG    EDILEL
Sbjct: 182 LNNLSGGPVGIAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDILEL 241

Query: 244 LQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQ 284
           LQSPPFRQQVD+FTYVLRTGQIDL+QFGIDPSKYKFTV SFL+ALEDSVS  S   +++
Sbjct: 242 LQSPPFRQQVDAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVSTQSRDAMDE 299

The following BLAST results are available for this feature:

BLAST of CSPI02G06710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48726	2.8e-99	63.55	26S proteasome regulatory subunit RPN13 OS=Arabidopsis thaliana OX=3702 GN=RPN13...	[more]
Q6NZ09	1.5e-36	30.99	Proteasomal ubiquitin receptor ADRM1 OS=Danio rerio OX=7955 GN=adrm1b PE=1 SV=1	[more]
A1L5A6	2.4e-34	28.50	Proteasomal ubiquitin receptor ADRM1 OS=Bos taurus OX=9913 GN=ADRM1 PE=2 SV=1	[more]
Q98SH3	2.4e-34	30.51	Proteasomal ubiquitin receptor ADRM1 OS=Gallus gallus OX=9031 GN=ADRM1 PE=2 SV=1	[more]
Q6GN67	4.1e-34	27.94	Proteasomal ubiquitin receptor ADRM1-A OS=Xenopus laevis OX=8355 GN=adrm1-a PE=2...	[more]

BLAST of CSPI02G06710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C8P5	5.2e-165	98.68	26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BQP8	5.2e-165	98.68	26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A1S3BP07	1.3e-163	98.35	26S proteasome regulatory subunit RPN13 isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7TXA8	2.1e-158	95.72	26S proteasome regulatory subunit RPN13 isoform X1 OS=Cucumis melo var. makuwa O...	[more]
A0A0A0LKE1	2.1e-158	99.31	RPN13_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070250 PE=...	[more]

BLAST of CSPI02G06710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648975.1	6.7e-167	100.00	26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis sativus]	[more]
XP_004152857.1	1.7e-165	99.67	26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis sativus] >XP_0317370...	[more]
XP_008450644.1	1.1e-164	98.68	PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis melo] >TY...	[more]
XP_008450629.1	2.7e-163	98.35	PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis melo] >XP...	[more]
XP_031737035.1	2.0e-158	99.65	26S proteasome regulatory subunit RPN13 isoform X3 [Cucumis sativus]	[more]

BLAST of CSPI02G06710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26590.1	2.0e-100	63.55	regulatory particle non-ATPase 13	[more]
AT2G26590.2	2.0e-100	63.55	regulatory particle non-ATPase 13	[more]
AT2G26590.3	2.0e-100	63.55	regulatory particle non-ATPase 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038633	Proteasomal ubiquitin receptor Rpn13/ADRM1, Pru domain superfamily	GENE3D	2.30.29.70	Proteasomal ubiquitin receptor Rpn13/ADRM1	coord: 12..124 e-value: 4.1E-38 score: 131.8
IPR044868	Rpn13/ADRM1, Pru domain	PFAM	PF04683	Proteasom_Rpn13	coord: 22..103 e-value: 1.1E-24 score: 86.7
IPR044868	Rpn13/ADRM1, Pru domain	PROSITE	PS51917	PRU	coord: 11..123 score: 51.119499
IPR038108	RPN13, DEUBAD domain superfamily	GENE3D	1.10.2020.20		coord: 164..274 e-value: 1.4E-19 score: 72.1
IPR032368	RPN13, DEUBAD domain	PFAM	PF16550	RPN13_C	coord: 164..269 e-value: 1.1E-23 score: 83.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..302
None	No IPR available	CDD	cd13314	PH_Rpn13	coord: 17..120 e-value: 9.24174E-57 score: 176.691
IPR006773	Proteasomal ubiquitin receptor Rpn13/ADRM1	PANTHER	PTHR12225	ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN	coord: 7..279
IPR044867	DEUBAD domain	PROSITE	PS51916	DEUBAD	coord: 176..279 score: 13.55789

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G06710.1	CSPI02G06710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010950	positive regulation of endopeptidase activity
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0008541	proteasome regulatory particle, lid subcomplex
molecular_function	GO:0061133	endopeptidase activator activity
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding