CSPI02G06360 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G06360
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Subtilisin-like protease SBT2.6
Location	Chr2: 4915438 .. 4917615 (-)
RNA-Seq Expression	CSPI02G06360
Synteny	CSPI02G06360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCTGATTGCATAACAGCAATGGTCTTGAATATCTCTCCAAGGAGTTCCCTCTCCATTAATGTGAAAAGCGTAGCATTGCTCTGGACAGGTACACATGATTTGTTGATATTTTATATATGCAAGGTGCATTGCTGTAAGTTTTTGCCATTCTGTCTGACTGTCTTCTTGATATATGAACCCTTGGTAAATATATATTTTACATGTAAATGCAAACCTATATGTATATTTATCTTGGGAACGCACTTGGAAGCTCTTTAGTTGATCATGTTAATTTTGGTATAGGTGCTCAATCTTCTTTTAGATTTATGGAATTCCATAGGATTAATAAGTAACTTAGTTTCCGCCAAAAAGTTTATGTACTTGTTGCCTGAGTTCATTTATAACAGATGTGATAAGTAACCAACTAATATATGAACCAGTTTGCTCGGAACGTGTTCTATTTGAGTTCAAAATGAATTGGGGTAAAAGTTCCATCATAGGTCTCAACTGTTGTCCTGCCAAATTAAGTTATTGGGCATATTTGGTTGGGAGTGAGGTGTGGTAGTTTCTGTGTCCTCTTATATTGGGCTTCCTTTGGGGGTAATCTGTGGAGTTAGATTACCTTATCTTGCACCAAATATGGAAATGACTATTTGATTTGAAATATGCATTTTTCTCTGAAGGAGGAAGACTCACTTGTATTTACTTGGTGTTGAGTGGAATCCCCAGTTACTCTCTGTCTTGTCAGAATTATGATGTTTATGAGTCAATCTGTTGAGAGAGTGATACAAAATTTCTTGCAAGGGGTTAATGTGGGGAGCGTCTCATTTGGTTTAGTGGAAGTTCGTGGTGCAAGTAGTAGAATTAAGGAGGTTTAGGGATTGGGAGCCTGAGATTATGTAATGAGACCCTGTTGGCTAAGCGGTTGTGATGCTTCTTTAGGAGCTTGATGCTTTGTGGTCCAATGTTATTTTGAAAAGAAAGGACCGCGTCCTTCCAACTGGGTGGCAATTTTGGTTGAGTTGGACTTCGTAAAATCCTCTGGAACGCTTAATGCATATGGTTTCCAGTTTGTTAGATGCTCTGTTTGAGAAGGCTTGAAAGTTTGCTTTGGGAGGTTTGTTAGATAGCCTCTGTGTGCTGTTTTCTCATTTATAACATCTTTCTGAAAAGAAGCATCATTCATTGGCCTCAATTTTTTCTTCTCCTTCAGATTCCTCTTCTTCTATATCCTTGGGCTTCCGTCATCCTCTTTCTGACAGAGAGGGGATTCATGTGATCCTAGGATTTGGTCTCCTGTTCCTATCTTTTACGGGTCATGAAGAAAAATTCTCTGTTTATGTCCATGCATATAAGAAAAACCTTGTACATGTCAACCATACGTTGCTGGTCGGCAACTTGTCCAGAAATCTTTGGAATTCGTGTTACTGCATTGAATGCTCTAGTAGAAATCTTTGGACTTGGGGTAAAAGCTTTATATTAAAAGCCTCCTGTACTCGCTGTTTCAAAGATGCTCCACTTAGACAAGAAATGAGCTGAAATATACTTTGTTCATTTTGTTATGAGTTAAATAATAGATGTTTTTACTCTCTCTGTTCCTACTGTACCAGCCATACAGCAGCAATTGTAGCTGGAAATAATGGAATCCCTGTGAGAATTATGCCTGGCTAGGAATTTGGTTAAGCAAGTGGGATGGCTTCCTTTGACAAGTGAGGGAGTGAGAAATGGCTCAATTTAAAGCATCTGTATGACTATCATTCGCCTCCTAAATGTTTCAATTGAATTTCTATCCACAGAATTGCTGAACTTAACTACAGAATTTTTGTAGGATTTGTTGCTGATGTAGTTGCAGCTATTGAGATCAGGGGTGTACCGTACGTGCAATGACTTTTGGGAACCTAAATCTTGAGTTATTTTTCCAATGTGTATACAATGGCTCAGGTCATGTCAAATCTTGCTAATTCCCACGTTCTCAAACATTCACAAGATACACAACTCTACAAACTAACCTTGCAACTTTACCATTGCCATGATCGTTTCTCATGCAGCAACACATGTCGCCGAGGAAGAACCTATACAATTACTAGAACGGATCCTGCTGTTGCCATAGAAGTGAATCCTCCAACAATGACTTTCCGGTTCGGTTCTTCGAGAACACTTCTTCAGTTATTCTTGCAGCAGCTCGATCAGTGA

mRNA sequence

ATGGAGGCTGATTGCATAACAGCAATGGTCTTGAATATCTCTCCAAGGAGTTCCCTCTCCATTAATGTGAAAAGCGTAGCATTGCTCTGGACAGGATTTGTTGCTGATGTAGTTGCAGCTATTGAGATCAGGGGTGTACCCAACACATGTCGCCGAGGAAGAACCTATACAATTACTAGAACGGATCCTGCTGTTGCCATAGAAGTGAATCCTCCAACAATGACTTTCCGGTTCGGTTCTTCGAGAACACTTCTTCAGTTATTCTTGCAGCAGCTCGATCAGTGA

Coding sequence (CDS)

ATGGAGGCTGATTGCATAACAGCAATGGTCTTGAATATCTCTCCAAGGAGTTCCCTCTCCATTAATGTGAAAAGCGTAGCATTGCTCTGGACAGGATTTGTTGCTGATGTAGTTGCAGCTATTGAGATCAGGGGTGTACCCAACACATGTCGCCGAGGAAGAACCTATACAATTACTAGAACGGATCCTGCTGTTGCCATAGAAGTGAATCCTCCAACAATGACTTTCCGGTTCGGTTCTTCGAGAACACTTCTTCAGTTATTCTTGCAGCAGCTCGATCAGTGA

Protein sequence

MEADCITAMVLNISPRSSLSINVKSVALLWTGFVADVVAAIEIRGVPNTCRRGRTYTITRTDPAVAIEVNPPTMTFRFGSSRTLLQLFLQQLDQ*

Homology

[Close]

BLAST of CSPI02G06360 vs. ExPASy Swiss-Prot
Match: Q9SZV5 (Subtilisin-like protease SBT2.6 OS=Arabidopsis thaliana OX=3702 GN=SBT2.6 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.4e-04
Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 0


Query: 44  RGVPNTCRRGRTYTIT-RTDPAVAIEVNPPTMTFRFGSSRT 84
           R V N      TYTIT R +PA+AIEV+PP MT R G+SRT
Sbjct: 736 RRVTNVAEEEETYTITSRMEPAIAIEVSPPAMTVRAGASRT 776

[Close]

BLAST of CSPI02G06360 vs. ExPASy Swiss-Prot
Match: O64481 (Subtilisin-like protease SBT2.5 OS=Arabidopsis thaliana OX=3702 GN=SBT2.5 PE=2 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 9.0e-04
Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = 0


Query: 44  RGVPNTCRRGRTYTIT-RTDPAVAIEVNPPTMTFRFGSSRT 84
           R V N      TYTIT R  P++AIEVNPP MT R G++RT
Sbjct: 735 RKVTNVAEVEETYTITARMQPSIAIEVNPPAMTLRPGATRT 775

[Close]

BLAST of CSPI02G06360 vs. ExPASy TrEMBL
Match: A0A0A0LGV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060510 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.7e-17
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 48 NTCRRGRTYTITRTDPAVAIEVNPPTMTFRFGSSRTLLQLFLQQLDQ 95
          NTCRRGRTYTITRTDPAVAIEVNPPTMTF+FGSSRTLLQLFLQQLDQ
Sbjct: 40 NTCRRGRTYTITRTDPAVAIEVNPPTMTFQFGSSRTLLQLFLQQLDQ 86

[Close]

BLAST of CSPI02G06360 vs. ExPASy TrEMBL
Match: A0A5D3CA56 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1411G00100 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.8e-05
Identity = 40/112 (35.71%), Postives = 43/112 (38.39%), Query Frame = 0


Query: 29  LWTGFVADVVAAIEIRGVP----------------------------------------- 85
           ++ GFVAD VAAIEIR VP                                         
Sbjct: 103 IFVGFVADAVAAIEIRSVPRMTFGNLKHELFFQCVYDDSGHVESCQLPRSQHSQATQLYK 162

[Close]

BLAST of CSPI02G06360 vs. ExPASy TrEMBL
Match: A0A5A7SRI1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00060 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.8e-05
Identity = 40/112 (35.71%), Postives = 43/112 (38.39%), Query Frame = 0


Query: 29  LWTGFVADVVAAIEIRGVP----------------------------------------- 85
           ++ GFVAD VAAIEIR VP                                         
Sbjct: 103 IFVGFVADAVAAIEIRSVPRMTFGNLKHELFFQCVYDDSGHVESCQLPRSQHSQATQLYK 162

[Close]

BLAST of CSPI02G06360 vs. NCBI nr
Match: TYK08887.1 (hypothetical protein E5676_scaffold1411G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 7.9e-05
Identity = 40/112 (35.71%), Postives = 43/112 (38.39%), Query Frame = 0


Query: 29  LWTGFVADVVAAIEIRGVP----------------------------------------- 85
           ++ GFVAD VAAIEIR VP                                         
Sbjct: 103 IFVGFVADAVAAIEIRSVPRMTFGNLKHELFFQCVYDDSGHVESCQLPRSQHSQATQLYK 162

[Close]

BLAST of CSPI02G06360 vs. NCBI nr
Match: KAA0031745.1 (hypothetical protein E6C27_scaffold506G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 7.9e-05
Identity = 40/112 (35.71%), Postives = 43/112 (38.39%), Query Frame = 0


Query: 29  LWTGFVADVVAAIEIRGVP----------------------------------------- 85
           ++ GFVAD VAAIEIR VP                                         
Sbjct: 103 IFVGFVADAVAAIEIRSVPRMTFGNLKHELFFQCVYDDSGHVESCQLPRSQHSQATQLYK 162

[Close]

BLAST of CSPI02G06360 vs. TAIR 10
Match: AT4G30020.1 (PA-domain containing subtilase family protein )

HSP 1 Score: 47.0 bits (110), Expect = 9.9e-06
Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 0


Query: 44  RGVPNTCRRGRTYTIT-RTDPAVAIEVNPPTMTFRFGSSRT 84
           R V N      TYTIT R +PA+AIEV+PP MT R G+SRT
Sbjct: 736 RRVTNVAEEEETYTITSRMEPAIAIEVSPPAMTVRAGASRT 776

[Close]

BLAST of CSPI02G06360 vs. TAIR 10
Match: AT2G19170.1 (subtilisin-like serine protease 3 )

HSP 1 Score: 44.3 bits (103), Expect = 6.4e-05
Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = 0


Query: 44  RGVPNTCRRGRTYTIT-RTDPAVAIEVNPPTMTFRFGSSRT 84
           R V N      TYTIT R  P++AIEVNPP MT R G++RT
Sbjct: 735 RKVTNVAEVEETYTITARMQPSIAIEVNPPAMTLRPGATRT 775

The following BLAST results are available for this feature:

BLAST of CSPI02G06360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZV5	1.4e-04	58.54	Subtilisin-like protease SBT2.6 OS=Arabidopsis thaliana OX=3702 GN=SBT2.6 PE=2 S...	[more]
O64481	9.0e-04	56.10	Subtilisin-like protease SBT2.5 OS=Arabidopsis thaliana OX=3702 GN=SBT2.5 PE=2 S...	[more]

BLAST of CSPI02G06360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGV1	5.7e-17	97.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060510 PE=4 SV=1	[more]
A0A5D3CA56	3.8e-05	35.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SRI1	3.8e-05	35.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CSPI02G06360 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK08887.1	7.9e-05	35.71	hypothetical protein E5676_scaffold1411G00100 [Cucumis melo var. makuwa]	[more]
KAA0031745.1	7.9e-05	35.71	hypothetical protein E6C27_scaffold506G00060 [Cucumis melo var. makuwa]	[more]

BLAST of CSPI02G06360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30020.1	9.9e-06	58.54	PA-domain containing subtilase family protein	[more]
AT2G19170.1	6.4e-05	56.10	subtilisin-like serine protease 3	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G06360.1	CSPI02G06360.1	mRNA