CSPI02G06300 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G06300
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	ABC transporter C family member 2
Location	Chr2: 4858139 .. 4858514 (+)
RNA-Seq Expression	CSPI02G06300
Synteny	CSPI02G06300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCACTATTGCACACAGATTAAATACCATCATAGACTGTGATCGAATTCTTCTACTTGAATTTGGTCAGGTAAAGTTTTTCTTACTTTCAATAATATCATTCAATCAATGCACTTAATTACCCATATTAACATTCTAGTTCTATTTGAGTTGCAGTATATCTTTTTCTATCTTTCTACTACAAGCATTAGTCTCTTATTGTTTGCTTTTTTACATAATAGGTGTTGGAGTACGACACTCCAAAACAACTTTTATCGAATGAAGAAAGTGATTTTTCAAAGATGGTTCAAAGTACAGGAGTTGCCAATGCTCAATACTTGCACAAATTAGTATTTGAAGGTCAAGACAACATAGGAATAAGCAAGGAAATGTGA

mRNA sequence

ATGCTCACTATTGCACACAGATTAAATACCATCATAGACTGTGATCGAATTCTTCTACTTGAATTTGGTCAGGTGTTGGAGTACGACACTCCAAAACAACTTTTATCGAATGAAGAAAGTGATTTTTCAAAGATGGTTCAAAGTACAGGAGTTGCCAATGCTCAATACTTGCACAAATTAGTATTTGAAGGTCAAGACAACATAGGAATAAGCAAGGAAATGTGA

Coding sequence (CDS)

ATGCTCACTATTGCACACAGATTAAATACCATCATAGACTGTGATCGAATTCTTCTACTTGAATTTGGTCAGGTGTTGGAGTACGACACTCCAAAACAACTTTTATCGAATGAAGAAAGTGATTTTTCAAAGATGGTTCAAAGTACAGGAGTTGCCAATGCTCAATACTTGCACAAATTAGTATTTGAAGGTCAAGACAACATAGGAATAAGCAAGGAAATGTGA

Protein sequence

MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQDNIGISKEM*

Homology

[Close]

BLAST of CSPI02G06300 vs. ExPASy Swiss-Prot
Match: Q9C8H0 (ABC transporter C family member 12 OS=Arabidopsis thaliana OX=3702 GN=ABCC12 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.0e-19
Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            ML IAHRLNTIIDCD+IL+L  GQVLEYD+P++LLS + S F +MV STG ANAQYL  L
Sbjct: 1423 MLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGPANAQYLSNL 1482

Query: 61   VFEGQDN 68
            VFE ++N
Sbjct: 1483 VFERREN 1489

[Close]

BLAST of CSPI02G06300 vs. ExPASy Swiss-Prot
Match: Q9C8H1 (ABC transporter C family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCC11 PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 8.7e-18
Identity = 45/67 (67.16%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            ML IAHRLNTIIDCD+IL+L  GQVLEYD+P++LLS + S F KMV STG  N QYL  L
Sbjct: 1423 MLIIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFKMVHSTGPENGQYLSNL 1482

Query: 61   VFEGQDN 68
            VFE + N
Sbjct: 1483 VFERRGN 1489

[Close]

BLAST of CSPI02G06300 vs. ExPASy Swiss-Prot
Match: Q42093 (ABC transporter C family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCC2 PE=1 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 1.5e-17
Identity = 43/65 (66.15%), Postives = 53/65 (81.54%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            ML IAHRLNTIIDCD+IL+L+ G+V E+ +P+ LLSNE S FSKMVQSTG ANA+YL  L
Sbjct: 1430 MLIIAHRLNTIIDCDKILVLDSGRVQEFSSPENLLSNEGSSFSKMVQSTGAANAEYLRSL 1489

Query: 61   VFEGQ 66
            V + +
Sbjct: 1490 VLDNK 1494

[Close]

BLAST of CSPI02G06300 vs. ExPASy Swiss-Prot
Match: Q9C8G9 (ABC transporter C family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCC1 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.3e-17
Identity = 41/65 (63.08%), Postives = 52/65 (80.00%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            ML IAHRLNTIIDCD++L+L+ G+V E+ +P+ LLSN ES FSKMVQSTG ANA+YL  +
Sbjct: 1425 MLIIAHRLNTIIDCDKVLVLDSGKVQEFSSPENLLSNGESSFSKMVQSTGTANAEYLRSI 1484

Query: 61   VFEGQ 66
              E +
Sbjct: 1485 TLENK 1489

[Close]

BLAST of CSPI02G06300 vs. ExPASy Swiss-Prot
Match: Q54LE6 (ABC transporter C family member 5 OS=Dictyostelium discoideum OX=44689 GN=abcC5 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.8e-10
Identity = 29/61 (47.54%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            +LTIAHRLNTI++ DRI++L+ G ++E++ P  L  NE S F+ ++  TG  N+QYL  L
Sbjct: 1398 ILTIAHRLNTIVESDRIMVLDSGSIVEFNKPSILAQNENSLFNWLIDETGTQNSQYLRSL 1457

Query: 61   V 62
            +
Sbjct: 1458 I 1458

[Close]

BLAST of CSPI02G06300 vs. ExPASy TrEMBL
Match: A0A0A0LGU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060460 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.9e-33
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1   MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
           MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL
Sbjct: 79  MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 138

Query: 61  VFEGQDNIGISKEM 75
           VFEGQDNIGISKEM
Sbjct: 139 VFEGQDNIGISKEM 152

[Close]

BLAST of CSPI02G06300 vs. ExPASy TrEMBL
Match: A0A5A7TBT5 (ABC transporter C family member 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold47G00050 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-28
Identity = 67/74 (90.54%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 1   MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
           MLTIAHRLNTIIDCDRILLLEFGQVLEYDTP+QLLSN+ES FSK+VQSTGV NAQYLHKL
Sbjct: 616 MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPEQLLSNQESGFSKIVQSTGVTNAQYLHKL 675

Query: 61  VFEGQDNIGISKEM 75
           VFEGQDNI  SKEM
Sbjct: 676 VFEGQDNIETSKEM 689

[Close]

BLAST of CSPI02G06300 vs. ExPASy TrEMBL
Match: A0A6J1CYS4 (ABC transporter C family member 2-like OS=Momordica charantia OX=3673 GN=LOC111015826 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.5e-20
Identity = 55/75 (73.33%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            ML IAHRLNTIIDCDRILLLE G+VLEY+TP++LLSNE+S FSKMVQSTG ANAQYL  L
Sbjct: 1427 MLIIAHRLNTIIDCDRILLLEAGRVLEYNTPEELLSNEKSSFSKMVQSTGAANAQYLRSL 1486

Query: 61   VF--EGQDNIGISKE 74
            V   EG+  +GI +E
Sbjct: 1487 VLGGEGEKKLGIEEE 1501

[Close]

BLAST of CSPI02G06300 vs. ExPASy TrEMBL
Match: A0A6P6AD05 (ABC transporter C family member 2-like OS=Durio zibethinus OX=66656 GN=LOC111308549 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.6e-20
Identity = 54/71 (76.06%), Postives = 60/71 (84.51%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            ML IAHRLNTIIDCDRILLL+ G+VLEYDTP++LLSNEES FSKMVQSTG ANAQYL  L
Sbjct: 1427 MLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEESAFSKMVQSTGAANAQYLRSL 1486

Query: 61   VF--EGQDNIG 70
                EG+D +G
Sbjct: 1487 ALGGEGEDRLG 1497

[Close]

BLAST of CSPI02G06300 vs. ExPASy TrEMBL
Match: B9HZ05 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G043100 PE=4 SV=3)

HSP 1 Score: 105.9 bits (263), Expect = 7.4e-20
Identity = 52/67 (77.61%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            ML IAHRLNTIIDCDRIL+LE GQVLE+ TP++LLSNE S FS+MVQSTG ANAQYLH L
Sbjct: 1427 MLIIAHRLNTIIDCDRILVLEAGQVLEHSTPEELLSNEGSAFSRMVQSTGPANAQYLHSL 1486

Query: 61   VFEGQDN 68
            VFE ++N
Sbjct: 1487 VFESKEN 1493

[Close]

BLAST of CSPI02G06300 vs. NCBI nr
Match: KAE8651675.1 (hypothetical protein Csa_021219, partial [Cucumis sativus])

HSP 1 Score: 148.7 bits (374), Expect = 2.0e-32
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1   MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
           MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL
Sbjct: 47  MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 106

Query: 61  VFEGQDNIGISKEM 75
           VFEGQDNIGISKEM
Sbjct: 107 VFEGQDNIGISKEM 120

[Close]

BLAST of CSPI02G06300 vs. NCBI nr
Match: KAA0038845.1 (ABC transporter C family member 2 [Cucumis melo var. makuwa])

HSP 1 Score: 135.2 bits (339), Expect = 2.3e-28
Identity = 67/74 (90.54%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 1   MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
           MLTIAHRLNTIIDCDRILLLEFGQVLEYDTP+QLLSN+ES FSK+VQSTGV NAQYLHKL
Sbjct: 616 MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPEQLLSNQESGFSKIVQSTGVTNAQYLHKL 675

Query: 61  VFEGQDNIGISKEM 75
           VFEGQDNI  SKEM
Sbjct: 676 VFEGQDNIETSKEM 689

[Close]

BLAST of CSPI02G06300 vs. NCBI nr
Match: XP_038877675.1 (ABC transporter C family member 2-like isoform X3 [Benincasa hispida] >XP_038877676.1 ABC transporter C family member 2-like isoform X3 [Benincasa hispida] >XP_038877677.1 ABC transporter C family member 2-like isoform X3 [Benincasa hispida])

HSP 1 Score: 107.8 bits (268), Expect = 4.0e-20
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            ML IAHRLNTIIDCDRIL+LE G+VLEY+TPK+LLS EES FSKMVQSTG ANAQYLH L
Sbjct: 1098 MLIIAHRLNTIIDCDRILVLEAGRVLEYNTPKELLSKEESAFSKMVQSTGAANAQYLHSL 1157

Query: 61   VFEGQ 66
            V EG+
Sbjct: 1158 VLEGE 1162

[Close]

BLAST of CSPI02G06300 vs. NCBI nr
Match: XP_038877673.1 (ABC transporter C family member 2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 107.8 bits (268), Expect = 4.0e-20
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            ML IAHRLNTIIDCDRIL+LE G+VLEY+TPK+LLS EES FSKMVQSTG ANAQYLH L
Sbjct: 1186 MLIIAHRLNTIIDCDRILVLEAGRVLEYNTPKELLSKEESAFSKMVQSTGAANAQYLHSL 1245

Query: 61   VFEGQ 66
            V EG+
Sbjct: 1246 VLEGE 1250

[Close]

BLAST of CSPI02G06300 vs. NCBI nr
Match: XP_038877674.1 (ABC transporter C family member 2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 107.8 bits (268), Expect = 4.0e-20
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            ML IAHRLNTIIDCDRIL+LE G+VLEY+TPK+LLS EES FSKMVQSTG ANAQYLH L
Sbjct: 1102 MLIIAHRLNTIIDCDRILVLEAGRVLEYNTPKELLSKEESAFSKMVQSTGAANAQYLHSL 1161

Query: 61   VFEGQ 66
            V EG+
Sbjct: 1162 VLEGE 1166

[Close]

BLAST of CSPI02G06300 vs. TAIR 10
Match: AT1G30410.1 (multidrug resistance-associated protein 13 )

HSP 1 Score: 94.4 bits (233), Expect = 4.3e-20
Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            ML IAHRLNTIIDCD+IL+L  GQVLEYD+P++LLS + S F +MV STG ANAQYL  L
Sbjct: 1396 MLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGPANAQYLSNL 1455

Query: 61   VFEGQDN 68
            VFE ++N
Sbjct: 1456 VFERREN 1462

[Close]

BLAST of CSPI02G06300 vs. TAIR 10
Match: AT1G30420.1 (multidrug resistance-associated protein 12 )

HSP 1 Score: 90.5 bits (223), Expect = 6.2e-19
Identity = 45/67 (67.16%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            ML IAHRLNTIIDCD+IL+L  GQVLEYD+P++LLS + S F KMV STG  N QYL  L
Sbjct: 1423 MLIIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFKMVHSTGPENGQYLSNL 1482

Query: 61   VFEGQDN 68
            VFE + N
Sbjct: 1483 VFERRGN 1489

[Close]

BLAST of CSPI02G06300 vs. TAIR 10
Match: AT2G34660.1 (multidrug resistance-associated protein 2 )

HSP 1 Score: 89.7 bits (221), Expect = 1.1e-18
Identity = 43/65 (66.15%), Postives = 53/65 (81.54%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            ML IAHRLNTIIDCD+IL+L+ G+V E+ +P+ LLSNE S FSKMVQSTG ANA+YL  L
Sbjct: 1430 MLIIAHRLNTIIDCDKILVLDSGRVQEFSSPENLLSNEGSSFSKMVQSTGAANAEYLRSL 1489

Query: 61   VFEGQ 66
            V + +
Sbjct: 1490 VLDNK 1494

[Close]

BLAST of CSPI02G06300 vs. TAIR 10
Match: AT2G34660.2 (multidrug resistance-associated protein 2 )

HSP 1 Score: 89.7 bits (221), Expect = 1.1e-18
Identity = 43/65 (66.15%), Postives = 53/65 (81.54%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            ML IAHRLNTIIDCD+IL+L+ G+V E+ +P+ LLSNE S FSKMVQSTG ANA+YL  L
Sbjct: 1430 MLIIAHRLNTIIDCDKILVLDSGRVQEFSSPENLLSNEGSSFSKMVQSTGAANAEYLRSL 1489

Query: 61   VFEGQ 66
            V + +
Sbjct: 1490 VLDNK 1494

[Close]

BLAST of CSPI02G06300 vs. TAIR 10
Match: AT1G30400.1 (multidrug resistance-associated protein 1 )

HSP 1 Score: 88.2 bits (217), Expect = 3.1e-18
Identity = 41/65 (63.08%), Postives = 52/65 (80.00%), Query Frame = 0


Query: 1    MLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKL 60
            ML IAHRLNTIIDCD++L+L+ G+V E+ +P+ LLSN ES FSKMVQSTG ANA+YL  +
Sbjct: 1425 MLIIAHRLNTIIDCDKVLVLDSGKVQEFSSPENLLSNGESSFSKMVQSTGTANAEYLRSI 1484

Query: 61   VFEGQ 66
              E +
Sbjct: 1485 TLENK 1489

The following BLAST results are available for this feature:

BLAST of CSPI02G06300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8H0	6.0e-19	68.66	ABC transporter C family member 12 OS=Arabidopsis thaliana OX=3702 GN=ABCC12 PE=...	[more]
Q9C8H1	8.7e-18	67.16	ABC transporter C family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCC11 PE=...	[more]
Q42093	1.5e-17	66.15	ABC transporter C family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCC2 PE=1 ...	[more]
Q9C8G9	4.3e-17	63.08	ABC transporter C family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCC1 PE=1 ...	[more]
Q54LE6	1.8e-10	47.54	ABC transporter C family member 5 OS=Dictyostelium discoideum OX=44689 GN=abcC5 ...	[more]

BLAST of CSPI02G06300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGU8	9.9e-33	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060460 PE=4 SV=1	[more]
A0A5A7TBT5	1.1e-28	90.54	ABC transporter C family member 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A6J1CYS4	2.5e-20	73.33	ABC transporter C family member 2-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6P6AD05	5.6e-20	76.06	ABC transporter C family member 2-like OS=Durio zibethinus OX=66656 GN=LOC111308...	[more]
B9HZ05	7.4e-20	77.61	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G043100 PE=4 ...	[more]

BLAST of CSPI02G06300 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651675.1	2.0e-32	100.00	hypothetical protein Csa_021219, partial [Cucumis sativus]	[more]
KAA0038845.1	2.3e-28	90.54	ABC transporter C family member 2 [Cucumis melo var. makuwa]	[more]
XP_038877675.1	4.0e-20	81.54	ABC transporter C family member 2-like isoform X3 [Benincasa hispida] >XP_038877...	[more]
XP_038877673.1	4.0e-20	81.54	ABC transporter C family member 2-like isoform X1 [Benincasa hispida]	[more]
XP_038877674.1	4.0e-20	81.54	ABC transporter C family member 2-like isoform X2 [Benincasa hispida]	[more]

BLAST of CSPI02G06300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30410.1	4.3e-20	68.66	multidrug resistance-associated protein 13	[more]
AT1G30420.1	6.2e-19	67.16	multidrug resistance-associated protein 12	[more]
AT2G34660.1	1.1e-18	66.15	multidrug resistance-associated protein 2	[more]
AT2G34660.2	1.1e-18	66.15	multidrug resistance-associated protein 2	[more]
AT1G30400.1	3.1e-18	63.08	multidrug resistance-associated protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..61 e-value: 9.1E-11 score: 43.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..46
None	No IPR available	PANTHER	PTHR24223	ATP-BINDING CASSETTE SUB-FAMILY C	coord: 1..67
None	No IPR available	PANTHER	PTHR24223:SF400	BNAC05G23280D PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G06300.1	CSPI02G06300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding