CSPI02G05320 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G05320
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DNA-directed RNA polymerase
Location	Chr2: 3781988 .. 3795959 (+)
RNA-Seq Expression	CSPI02G05320
Synteny	CSPI02G05320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAATAGTCAGAATTGAGAAAGAGGTTTAAGAAGGGGTTTCATCGTTCTTCCTCACAACACAACGTTGTCGCTTCCTCAATGCCTTAATTTTATCTTCAAAAGAAATGACAGCCACGGCCTCCTTCTTCCCAACTCTTCAAGCTCCAATTCATGGCAGCAATGCATGGAAGAAGCCCACTAAGAGATGGAAATGCGAAAGAAAAACCCACCCATCATTCACCTCAACCTTCAATTCCCCTCTTTCTTCTGTTTCTTTCCCCGTAAACTTCGATTCCACTTCCCAATCACTCCATCTTCAACCTCTAGCTGATTCAGTTCATGAAAATTTCACGGAAACTCTCGATAATTCCATGAATTTGCAGATACCCATTAGCGAAATTCACCAGATAACTCGAGGGGAATCTAGTAAAAGAATCTTCATTCAGGATCCGCCATGGATAGCTTCCTTGTTCTTGAAGGGGCTTTACAAATGCGTTCAGAAGGAAGTGAAATTAGAATTTATGGAGATTGAGAAGAGGAAGTATAATTTGCTGAGGAGGAGACAGATTAAGGCGGAGACAGAGGCTTGGGAAAAGATGGTTGAGGAGTATAAGGAGTTAGAGAAAGAAATGTGCGAGAAGAAATTAGCACCGAATTTGCCTTATGTGAAGAAATTGTTTCTGGGTTGGTTTGAGCCATTGAAGAATGCTATAGAGGAGGAGCAAAAAACGCAGAGGAGTAAGAAGCAGAAGGCGGCATTTGCACCTCATATAGAGTTATTATCTGCAGATAAAATGGCGGTTATTGTGATGTACAAGATGATGGGATTGTTGATGATGGCGGCGCAAGATGGCTGCGTTCAGGTCGTTCAGGCTGCGGTCCAGATTGGTGGTGCTATAGAGCAAGAGGTGAGCATTGGAGGTCTTGTGCTTTCTTTTAAGATGATTTTTTTTCTTCTAATTGAGCAATTACGCCTAGAACTTATAAACTTGTTGAGATAAAACACTACTGTTAGTGTCAGTTAGTGTACCACTGTAGCTTCAGAAAATGCACAACTCATTTGGGACAACTCTAAACGAGATTACAGTTGCAATTCATCCTCAGACTTCCAAAGTGTTTTAGTATTGAAGGCCCTGGATATGATATAGATTTAATTTAATTGCATACGAAATACTAAAATTTAGTTCTCTCTAGTTTGACCGTCTTATAGTTAAAATGACTTTCGTATCGTTCTAACTATCGAACTAGATTTTTTGAGTATACCTCATTGTAATTTGAATTCTGCAATAATGCTCTATCGAGGAAGAATTGTTGCTCTTTTCTCAGTGCTTCCTAAGCCAGCATCATTAAATAATTGTGTAAAGGGCTCAACTCTTCCTCTGAAATTAAACCAGGTTAGAATTCAGAGCATTCTGGAGAAGGCTAGGAGCAATCAGAGAACAAAGGTCCGAGCAGATACTGAGTGTTTGACCAAGGAGAAAGAGGTATTGAGGAAACAAGTTAATGGTTTAATTAGGAGAAGGAAGCTGAAAGAGGTGCAAAAGTTGTTGAAGAAAGAAGAATTTAAGGCTTGGGGTCGAGACACCCAGGCTAAGGTTTGTGGCTTCTATCTGTTATCTTATATGATTCAATGTAATCAATTCAATACTATTATTTGTAAGGCTTCTCTACCCTATCAAACTTTGCAGCTAGGAAGTCGTCTCATAGAATTGTTAATTGAATCAGCTTTCATTCAACCTCCAGTTAGCCAGTCAGCTGACAGTCCACCCGATATCCGACCTGCATTCTGGCATGGGTTTAAACCTGTTGCAAAAACTCCAGGGTGAGATTTATTTGTTCTGTCCATTTTCTGTTTCTTACAGATTGATGACCAAGCAACCAATTAGGTTCCATTTAACCAACCTCCACAGATTTTTTCATTAGAGTATCCTCAGTAGGCAATGTTTTATAGCAATGAGCCAAGGACATTTTGTGCTGGTTTTTGTCATCTTCTATGGCTTTTCTTTTCTTTTCCCCCCTTTTGGAGTGGGTGAGCTGGGTGGATGGCTGCTTCTTGGCAGGATCAAGTAGCCAACTCTTTTCATCGTAGCTTTTTCTGAACAGCTTATCATGCTTCTGACTTCTGCATTTTTTTGGTGATTGTAGGCAGAATTTTGTGAAGAAATATGGAGTTGTCGAATGCGATCCCATAGTTCTTGCTGGGCTTGACCGAACTGTTAGTTACCTCTTTCTTTTTTTTGAGAATATTAAAAGAATGAAGTGATGTTCTTAAATGGAACTGTATGAATTCATGTATCAAGTGGAACTTTTTCTGTTCCGAAAATTTTCTTTTCTAAACTATTACTTTCTGTCTTAAATCCTATGCAGGCGAAGCATATGTTAATTCCTTACATCCCTATGTTGGTTCCTCCTAAAAAATGGAAAGGGTATGAAGCAAATTGAATAAATGCACTTTATACTGTATATTTTTGTTAGGGTACCTGGCTCATGTTTACTGCATCATAAGATGCTGGGTAATAAGTGATTCTGAGTGCTTTAAGACACCTGTAGACTGCATCGTAGATGATATTTGCTACAAATCATAAATATGTGATGGAAATACACCTACAGGTATGATAAAGGTGGACACTTTTTCTTACCTTCATATGTCATGCGTACTCATGGATCAAGTAGGCAACAAGATGCCATGAAGAACATTTCTGGGAAACAGATGCAGAAAGTATTTGAGGTTTGAAACCTTGAATTCCCCTTTTTAACGAACATGAAATTAGTTTGTTGTACATCTGACATTTTAGCAGTTTTCTTCATGACATATAACAGTCTTTCTAGTTCTATTTGGCTTATTATTTTTCTTTGGTGCTTCTATCACACATGTAGTTGAGTCAACCTAATAATTCGTTGAAATGGGTTGTTTACAGGCGCTGGATATGCTAGGGAGCACCAAGTGGAGGGTGAATAGAAGTGTACTCAGCGTGGTGGAGAGTCTTTGGGCTCAAGGTGGCAATACAGCAGGCCTTGTTGATCGCAAAGATGTAAACTCATGATACTACCAAAGCCATTCTAACAATTATTAATTCTTGTGAACATGTATTCTCCTTAATATCATATCGGACAAAAGGGTACCAGTAACAATATAGTCAAACTTAATGCTAAATTGGATTTCCATTCATAAATGGCCACAGTTCCAGTTTTCATATTTTCTTGCCTAGGTATGGTTCTGCTTAATAGATGATGAATATTCTACATAAATAAAATGTTATATAATGTGAATTTCTGATAAAAAAAATGGTCCTTCGTGAATAAAATTCTTGGTTGTGTCATGATGGTTATTATTAGGACAAGAGTTCTGCATGATTTTCTGGTTATATGCTTCTTATGTGGTTGATTGATTCACATTTCATTGGCAAGTAGGTTCCCATTCCAGAGAAGCCACTTGGGGATTTGACAGAAATGCAAGAATGGAGATGGAGCATGAAGAAGGCAAAGAAAATCAACCAAGAGTTGCATTCCCAACGATGTGATGTTGAACTTAAGCTTTCGGTAAGATTTATTTTCTAATAACTTTCCTCTAGTTGAGAAATGCATATGTTACCTAGATAAGAAGCACGGTTATGAACAAGGCACGACACAACACAGGGATATCCTAATTTTAAAAACTGAGGCAGGGAGCTTGTTGGGATACGCTCTTGTTAATTATTATTTTTTTTAGAAAATATATATATTTAACATAAAATACTAAATGGACTCCACCTAAAAAGCATAAATTGTCTAGTTAATTAACAATTGTAGGAGACAAAACGTTTAGGTTTCTCTCTCTCTCTCTCTCTCTATATATATATATATATTTCTTCATATTTGATAGAAAAAAAGGGCTTTTCTTTCATCATCATCATCATTTATCTTAGTTTAACGTATAATTGATTTGAGCTTTAAATTTGGACCCAACATAAAAGGTTGGACGATTTTTTCTTTAAAATTTATTTCCGTCTGAAATGTGCACCCATGTGTCTAATTTTATTTTAATTTAGATAAGAATCATATCTTTGATAAAAATGAATTAAGGGGAAACCCCAACACCAATAGGTGACTACAAAAATAATTTCGAATTGGAAACTAAATAAGATAAAATAAATAAATATGTTCTTAGTTTTGCACCAAAAAAAAACAGTGGGCAGAGCCAAATCCAAAATCTATCAAAAGGTGAAGAATAATCTCTGAAAAAACGTCCGTTGCGCTCGCCTCAAAAGTCCAAAAGAAAGCACACATAATTGCCAACCAACCCATTTTTCAGTACCACCAAAAGGATGACCCACTAAAAGAGACGCGAGTAGGATGACCCACTACTCTAGTATTTCAAACATGTTATTGGAACATGCCAGAGACTAACCAAAAGCATCTAAAATAATATACTAAAGTCAGTATGTGCAAGGACAATGCACAAATAAATGAGTTGAGGAGTCATGTTGTCTTTGACGCACGATGCACCATGATGGAGAAAGAAGCATATAAGGCATACAACGTTGTAAGCGATCAATCATATTAACAACAGCAAGGCTAAGCTCCCATAATTTTTTTTAAAATTTTCTTAGGATAGTTATCCATCCATAAAATGGAATAAAACTCCTTCACAAGTGGCTTAACTGTACCCACCATTTCTTTAATACGAGATTTAGCAGAAAAAGATAAAAATGAATCAAGGGACTAGGACCAAGTATCAGGAGAAGGATGAAACCTAACTGACAAAAGATGGAATAATGTAGCCCATTCAAGTTCCTCCAAATCATTAAGATTACCTTGTGTCTGAAATTCAAAATAAATTAAAAAAGAAAGAGGACATGAATTGTCCGACATATACTCCCCCTATAATGGGGTGTTCGTGCTACTCAGCTGCCTAATAGATGAATTATTTGAGGGGGATACTAACAACAGTCCTTAAATCTGATTAGTGATTTTCATCCACTTCTATCTTAAATTTTAGGAATAAATATGAGTATCACATGTATATGCTTACTTTTCATTGTTGTGGACAATTATCTAAAATATCATTAACCAGTTATTTGTCATGAGTTAGGTTGCTCGCAAAATGAAGGATGAGGAAGGCTTTTATTACCCTCATAATCTTGATTTTCGTGGCCGAGCTTACCCAATGCATCCACATCTAAATCATTTGAGTTCTGATCTCTGTCGAGGAGTTCTCGAGTTTGCTGAAGGGCGACCTTTAGGAAAGTCTGGTTTGCATTGGCTAAAGATACATTTAGCTAATTTGTATGCTGGTGGTGTTGAAAAACTTTCCTATGACGAACGTCTAGCATTTGTGGATGACCATCTGGATAACATATTTGATTCTGCAAGTAACCCAGTCAATGGGGATCGTTGGTGGTTAACTGCTGAAGACCCTTTTCAATGCTTGGCTGCTTGTATGAATCTATCTGAAGCCCTAAAGAGCTCAGCACCACACACTGTCATTTCCTATCTGCCAATCCATCAGGTGGGTATCCCTTTAGTTTATTTTCCCTCGGATACAACTTTCATGTCTACTTATAATCAGTTTTATGACCTCCTGTCTAAATAATCTGTTGGATGCTTAAAAAATACTGTTGGATGATTTCTTATCCTTGTGTTATAAACATCTTTTCCCTATTATTCTTCTTTTTCTTGTAACGAAAACAAGGCTCTTTATTTATTATTAATAAATGAGACTAAAGCTCATAGTACAAAAATGTTATACTAAGAGCTAGAGAAAAGAGAAGAATTCAGGCAAACTACAACAAAAGCTAAACTTTGACAAGAAAGGAAATGACACGCGAAAAAATGAATTCCAACAGGAAATGATCAAGTAAACAGAACCACAGCTGTAGAAATGTAGAAATCTAAATACAAAGCATAACGAAAACTCTCTCATAAGGAACCCATTTCAATCTACAAACTTGCAAGAAGATGCAACTAACTGCCTGGTAACTGACTTGCCATATTAACCCAAAATCCAGAGGAAGCTTGAGAAAGTCTTTCAAAACATCAGCATCAGCATATAGACTTTACTTTCCCATCATTCTTCTTGAAGTTAAGTATATTTCTGTACAAGACGTTTTTCCACCTCATTCCTTGGCTTGTCAATTTTCATCAAGGAGAATCATCTATACGTGTATCTTTATTTGAAATAAGCTGTCATTCGTCATTCACAGTTTTTTTTTTTTTTTAAATTGAATCTCCAACATCTAGGGATGGAGCACATGGCAATACCACTGAACCAAGCTCACTCTGGCCAATTTTTTCTTGATTATTTACTGTCTTTATTTGAACTTGATATCTATTATCTTTTGTACATTTTTCGAGACATCTATTTATTCATTTAAGCGATGTAATGATAGCTTAAACGTCATAATTTTTCAGGATGGGTCATGCAATGGCTTACAGCACTATGCAGCTTTGGGAAGAGACACTGTAAGGCCAAATTATCTCTCCCTTCCTTATATTTCTGATGGATTATTTTGTTACAAGAAACAAACATTTAATTTTTATACTGTAAAGAGTAAGAGTTCAAAGAGATACAAACTTTTACTACATGTGAGGAAGTGAAGAAGAGAAAAAAATTAAAAAACATTACACTGAACAAACGAAGGTTTCCCAATTTATTACAAATATTATTAGGAGAATAAGACTCAGGAATTGCCTTAAACTTGGCAATTCTATACAATCCTCCCAAGGTTTGCTCTTGCCTTTGTCATACGATAATCATGAAGATATGACTTCAGTTGCATTTGTGTTGCCCATAAGATTCCTTCCTTATTTTGTGATTGCTCTTACAAGAAATTGAAATTACTATCAGTAATTCATCAACTTCTTCATAAGTCATCAAATAATATGTTTAGTGATGGTGAATTATAATGTGACAGTGCCAATATTTCCCTTTGGGCTTCAAAGTTTATTCTTTTGTCTTTTATTAATAATTCTGTTCTTTTTCAGCATTTTTTGCGTCTTTTTCTCACTAATGTTTTCATTTATAGTTTATGAAAATTAAGGAACCAGAAAGCTTAGACCGTTTTTGTTTCTGATTTAACAAGAATTGTCCCATTTGATCTCATGTCCATGTATTAGTTTCCAATGCTGTAAAGGCTTTATGTTAGCCCTGTTTGTCATGATTTCATAGTTTGTTGGAAAGGATGAGGGCCCTATGGGGTGTCAATCTGGGTGAGTCTACTAATCCTTAGGAGGCTCATTGTATAATTCTCTTGTACTATGAGCTTTCGTTTCACTATTAATCAATAAAAGAAACTTGTTTTCTTCTCAAAAAAAAAAAAGAAAAAAGAAAAAGAAAGAAAGAAAAGGAATCAGGTTGCAATAAATGGTTCTTCTTTCAATAGGATGTGCATGGATGATCTATCACACGAGTCTCTTATTATCAATTTCACATGTCGACTTGCTGATGTTGAAATTTTGGATTCTAAAAGATTATGTTTATGGATTTTCAGTTGGAAGCAGCTGCCGTAAACTTAGTTGCTGGAGAAAAACCTGCTGATGTTTACTCGGAAATTGCTGCCAGGTATGTTCAAGTCCTTGTCATCACTGGAAACAATTAGCATTGTACTTCTGTGTTACCGTAACTGACATATCAGTGCCATATATATATAGATATATATATTTTGGAAGGAGAAATATGAGACTATTCATTGTATGACTTCTAAAAGTTCTATATCTAATATGTCCTTTTGGTTAACACCAATTGGATGATTATGTTACTCTGATTTGTTCTGTTTATTGTTTTAATCATCCATTTTCTATATTTTTGCTGGTGTTCCAAAGAACATTTAAAGACGTGCGGGGTCTAGGGAATTTCTGGGATTTGGTTAGTTTTCTAGTGTTGAGACAGTGCACCCTTTAATCATCTTTGTAATTTCAACTCCCTTCCAATTTAGCCAAGTGGGGAGTCCTTTGTAGAACTTTCTCAGTTGGGAGATCGTTTGTCTTCTTTTTTTAGTACAAATTGTGGGGGTGGGGGATTTGAACATAGGACCTCTTGGTCTTCAATAAAAATTCCATTTCTTACGAGGAAGAATTCACGGTTGGCTACCTATCCATACAAAATCAGATTAAATTTAATACCTTTGTGTGGGCTTTGGTTTCTAAGATTTTATATATGTCAGTGAAAATGAATGTGTCCATTGGTGAAAATGAATGTGTCCACTCTTGTTTTACTTCTATTACTGGTCAACAGGGTTCACACTATCATGATCAGGGATGCTAGCAAAGATCCAACGACAAATCCAAATGCTTCCCTGGCTAAGCTCCTCATTGATCAGGTTTTTCTTTCTTGGCTTAGCCTCCAAGCTGCAGTTTAGTTAATGGATATTTTATGAAGATGCTCATGTTTTAACTTTTTTTTTGTCCAGACTTACACTTTTTGAACTAGTTTATCTTTTGTGATTTTCAGGTTGATCGCAAACTGGTAAAGCAGACAGTGATGACTTCTGTATATGGTGTCACATATATTGGTGCTCGCGAACAAATTAAAAGAAGACTGGAGGAGAAAGGCCTTATATCTGATGATAGACTACGATTTAGAGCATCCTGTTATGCTGCTAAAGTAAGTAGCTAACTAATATGTGATCAATTACATTCTGATATGGATAAATTACCTTTTGTTATTTTTGAATTGTAATTTATTTCATGCTTTATCAGAATATGAGACTTTCTTTGAACCTTATTATAGGGAATATTTAGTAAAAGAGAGTGAAGATAAGTCAACAGTCTTAATCTGTCTGTCGGTAACATTGACAACCATAACTTTTTTGTGTTGTTAGCTTACAAGAGTTTCAATACTTACCTAGGCTAAACCCCCCAAAAGAAGAAGAAAGAAAGAAAGAAAAATAATTCACCTAGGCTATTGAGGATATATCTCCACATAATCTCAAAATTTATCTTATTTATACTTTGGGGAAGTTTCTCTTATTCCCCTTGCTGTTGGAGTTCTTGTGCTCGTCTCCCCAAAATCCTGTCCAGTGGTTTTGTGCTAAAGTGAGATTTACACAAGGAATATGAGTCAGTGCTAAGGATTTGTCTTCTCTGGTTGGAGAGAGATTACAGAATCTTTCAAGATTAGTTTAGACTTTAGAGCTACTGGAGTTTGTTTGTGTGTGTGTATTATACTTTGCAGCATACTGTCTCCAATGGAGGGTATACAAGGGGAGTTTTGTAACTTTCCCCTTTTATTTTATTGACCCTTGGATTTTTATCTTTAATGCCCGGTGGATAGGTTGACGAGGGGTGTTGTTTTATCTCCTTGGTCATTACTTTTCTACCTCTTCCTTTAGTAAATGGGAATGGTTTCTTTCTTTCTTCATTTTTTTTTTTGCAAAATGTTCATCATTTGTAATATGACGGTACCCTTTTCCATAGGTGACGTTGTCTGCACTTGGAGAGATATTTGAAGCTGCACGTGGAATAATGGGTTGGCTTGGTGATTGCGCTAAGGTATGCCATTCTGTCATGTTATGGACAGTAGGCTACTTGCTAGCTACATAAACTGACATAATTTGGGTATTTCTTTTAACTGTCACTTGAAGTTTTGATTTTTATATTTGTCTTTCTTGAAGGTAATTGCTAAAGATAATCAGCCTGTGCGTTGGACCACTCCACTTGGTCTCCCTGTGGTACAACCATACTATAAAAGTGAACGGCATCTTGTGAGTAACTGCTTTGCTGAATCTTTTTCCAGAAATCAAATCAACTTTTGATTGGAAGTATGAAAAGTAGTCTAAGACTCAAGAGGTGGGAGCACCTTCATCCAAAGGAGCTTATAAAAAACCCACTTCAGTTGATAAGAATAAAAATAAAAAATGACAAAAATACAAAATACCAAATGAAATTATTCAAGTCCCTTCGGGGACATCAGATAAAATTGGAACAAAGTGGAGCTATTCAAGATGAGAGAAAGTTCACAAGACCTATAAAACTTAACACTTCCCCGAATACCCTCCCAACTCTTACTACTTAGTATTTCCTTTAAATAATTTATTTACTCTGACCTCTATAACCAACTCTTTCGAAGTTGTGCCTGCCCTAATCACTGCGCATGACCTCAGCACCTTTTTTTTTTTAAAAGGAGTACCACATAAGATATGCTAGATATTTGCTCAAGTGGCATGCACCAACTCAAACCAAGCTCTACAAAAATCTTATTCCAATTCCAACAACTACGGTACATTTACAGCTAAAGTACAGGTAAAAGGTGATTCACACTTGTAGTAACTTCTGGCACGAGACACTCCCTTTGCTTCGAGTTGGGCATGGTATGTTTCTCAGGAGAGATATTCCATTTGGTTTTTAGTGATAGAAAATATCTGTTGAACGAAGCGAGATGATTTACTAAGAATTCTTATTTATTACCAACAGATCTGAATTCTCTCTCTAAGTGTTAAGTTCTATTTGTGGAACTTTATCCAGTGCAAACCATTTGAAGGAGAGAAAGTTTTCCTTTTGGTAGGACTCAACCAGCCTCTTAAGTTTGCTCTCCCTAGGCTTTTCACTATTACGACTATTTGAAAATTATTGGATCTCTCAACACTGATGCCCTCAATTCATGGAGACTAGAAGTTGTTCATCGAAAGTGACTAGAATATCTTTCGGACTGTTTCTTGAGGCCCCAGGATTCTAATAGGCACTATTTTAAAATTTAAAATAAATTACTATCATTTCGGCCCTTTATTCCTCGTGGAAACTCCTGGAAATTTTGCACTGTTGTCCCTCTTTTTAACTCTCCAGCTATAAGCGTACAGAACCTGGTGGAATGGGCACAAGATTTTATGGCGTTGGTGCTGCAGAGTTGGGAGGATAATGTTTTTAGTTCCTAAGCATTTTAATTTAGTTATTTGTGCTTTGTACATGTAAATACTTGTATACTGGCCTAATAACTGTGGTTGATAATTATCTACAATCTGCCTGCAATCATCCTCGTTAATAAATCTTTCATACGACTCGTTAGAGGAAGACTCAATCATCAGTCTTATCTTTGTGCTGCAGATTAGGACATCTCTTCAAGTTTTAGCTTTACAGCGAGAGGGTAACTCGGTAAGCTTATGTCACTGGTCTTGAATCCCATGTTATTCTCCAGATTTTCATTGAGCTTACTTGACTGTTACATTGTTTCCAGGTGGATGTTAGAAAGCAGAGAACTGCATTTCCGCCCAATTTTGTGCACTCTCTAGATGGTTCACATATGATGCTCACAGCTCTTGCCTGTAGGGATGCTGGCTTACGTTTTGCAGGTTAGTTTTTCGACTTTATTAGAACAGATCCTTGATCGTTGAATAGCTTTGCACTGGGGAAAGAAAATTGTCAATTTGCAATAACTCGAAGATATGATTTGTATAAACTTGGTGGATTAAGGCATTAACTCAATCATTTAGAAGAGAGATCTTACTAGATTTTCATTCTCTTGGTACGAATCCTTCCCTTCTCATGGCAACAACTTCCAGTTCGTAAAACAAAGCTATGGAATATCCGAGTGCACTACCTCAAGAAGCCACGTAATTATGGAGAGATTACACAATTATGTGTACTCCCTGTTAACTTTTTCTCCTTATACTATTACGAGGGCATGCTTGAGGGGTTAGCAGTAAACTCATAGATACGATAATTTGCAAGGAGCAGATATAATTTTACTCTAATTCTAAATGTGCTTCCAGTTCATTGCGAGGTATATGTGTTCAACTTCCAGCCCATAAAATCCCTCAAATTCAAGTCCGCCAGTTTTTGGTGGTGTGGTTTTCAACTAAAGCATTGAAATTTTTTTTAACTACTATGGACCTTATTGAATTATTCCTCAAACAGTTTATCTATCAATAAATTATTTGACGTCAGTATTTATATAGAATATCCAGTTAAGAAAATGAGAAGTTGAACAACAAACAAGGTGCACAAGAAACAGCGTAAATAATAATTTTAAGGTGTCACAAATAAATGTTAAATTCAATTTCATTTTTAATGATTTCTTAGAACAACAACTTTCTAGAATTAAAATCTGTTGATGTACTCTGAGTCTCACCTCACCAAGCCAAGTACTTCTGTTTCAGGGGTGCATGACTCCTTCTGGACACATGCCTGTGATGTAGACCGGATGAATCTGATACTAAGGGAAAAATTTGTGGAGCTTTATAGTATGCCAGTTCTTGAAAGTGTAAGTATGCTGTTATTAAGTTTCTAAATGCGCAGAAATTCTACCAGCGATTAAGAAATTTAGTTTTTATTCAATCTATTACGAAGTCCAAATAAAAAACCACTATGCCTACATGTTTTTTGTGTCTTCAGTCCCTATACTTCCAAAAGTTATATTTTGATCTCTTTCATGTCAAGTATTTTCACACCTCTACCCTTGTATTAGACCTATTCTGCATTTTGATTCAAGAATATTTTATTTGTATCAAATTACACAAGTTAGGGTTTTTGCGGAATCTTTGGAAAGAAAGAAAGAAACAGTAGGACCTTAAGATAAGTGCTGTTATTTTGATTCTTTTTGTCTAAATGTGCAACTTGATGCTTTTTGGCAGTGCACAATTCACGCAAAAAAATTTCTTTTGTGATTATAGTCTTGCCATCATTATATAATTGGAAGGCTTTCATATAGTCTTGCTTTAGAAAGATATTCTCCAACTTACTCATTCATAATCTAACCTCTTCCTTCAATTAATATGATTTGTATACATGTTTTCTAACGAGTTAGTTTGAATTTATTTATTTGTTTGTTTTGTCTGATCACTGTGATTGGTAGTAAACGGAAGCATAAATGCTAAGTACGGATACGGTACGACACAAACACGACGACACACTATTTTTTAAAAAACTAGGACACAAACATGATAAGGGCACGTTTATGAAAGTCTACATTTTAAAAAGTATATATTGTTTTTATACTAGAATAAATTCAAAGAAATGGGTTGATGCATGTATATTCTTAAAAAATTAGTTGATGTATTTTACACTCAATTTATTATTATTATCATCTAGGTGTCTCTTTTTAATCTGCATAGCAAGTGTTTTATTCATGTCTGACACATTTATTACATTAACATTAACAAGTGTTCGATATGCGACTAACAAGTGTGTTAATGTCCATGTCATGGACAGAAATGCCCTTGCTTCCTAGTGTAAATGTAATAGAGCTTGATATAGTTTACACTTATCTCTTGAGTTTTGATTTTTGGATTTTTTTTTCTTTGAATTTAGATCAACTAACTGTTAGGCAAATTATAAATCTTAAAGAGCTATTTTGTTTTCTTGCCAGTTGCTTGAAGGCTTTGAAACAACATATCCAGGATTGACATTCCCTTCCCTCCCTGGGAGAGGCGATTTTGACTTGCAAGAGGTTCTAAAATCCCCTTACTTCTTCAACTGATTCTTCTGAACTCAACAGCAGGCATGACATTCTGCCGAAACATACTTTAGCAAAAACATGTATAGGAAACAATTTTGAGTAGTGGATGTAAGAGTGATACAAGAGACAAGAGCGAAGCCCAGAGCCAATTCGATCATGTCAGGAATTGTGAAACCATTCCAATTTGTTGCTCATCTCTTCAAGCTCTGCAATCCTGTCAGCACACTCTAATATCCTGCTGTCAAGGAAATGAACGTTTTCTCGGGTTGTCTTTGTAGCAGAACTTGATGGATACTCGCACAATCTGTGAGCTGAAAATGGTTCAGCCAAGACCGAAACTCGAGCAGGCGTCTTGTAGTTGGCAGCATTTTTTATCTGGCTTCTGACTTTGAGGGTTCATTTTCCTGCAGATGAGTATTCTTTTTCCCCACATCTACTGTATAAACCTTTTTTAGTATCAATTAGAAAGGAAAAGTAAGCTATTTGTTAGAAGCCTTTATTTTCACTTAGTAAGGAATGTAAGCTAAGCTATTAGAAGCCTTCATTTTGTCTGTGTATAGGTTCCCTAGTAAACTCTGTACTATATTCATTCAATAATTAAAGTAAGATATTTTTTTAAGCCCTA

mRNA sequence

GAAAATAGTCAGAATTGAGAAAGAGGTTTAAGAAGGGGTTTCATCGTTCTTCCTCACAACACAACGTTGTCGCTTCCTCAATGCCTTAATTTTATCTTCAAAAGAAATGACAGCCACGGCCTCCTTCTTCCCAACTCTTCAAGCTCCAATTCATGGCAGCAATGCATGGAAGAAGCCCACTAAGAGATGGAAATGCGAAAGAAAAACCCACCCATCATTCACCTCAACCTTCAATTCCCCTCTTTCTTCTGTTTCTTTCCCCGTAAACTTCGATTCCACTTCCCAATCACTCCATCTTCAACCTCTAGCTGATTCAGTTCATGAAAATTTCACGGAAACTCTCGATAATTCCATGAATTTGCAGATACCCATTAGCGAAATTCACCAGATAACTCGAGGGGAATCTAGTAAAAGAATCTTCATTCAGGATCCGCCATGGATAGCTTCCTTGTTCTTGAAGGGGCTTTACAAATGCGTTCAGAAGGAAGTGAAATTAGAATTTATGGAGATTGAGAAGAGGAAGTATAATTTGCTGAGGAGGAGACAGATTAAGGCGGAGACAGAGGCTTGGGAAAAGATGGTTGAGGAGTATAAGGAGTTAGAGAAAGAAATGTGCGAGAAGAAATTAGCACCGAATTTGCCTTATGTGAAGAAATTGTTTCTGGGTTGGTTTGAGCCATTGAAGAATGCTATAGAGGAGGAGCAAAAAACGCAGAGGAGTAAGAAGCAGAAGGCGGCATTTGCACCTCATATAGAGTTATTATCTGCAGATAAAATGGCGGTTATTGTGATGTACAAGATGATGGGATTGTTGATGATGGCGGCGCAAGATGGCTGCGTTCAGGTCGTTCAGGCTGCGGTCCAGATTGGTGGTGCTATAGAGCAAGAGGTTAGAATTCAGAGCATTCTGGAGAAGGCTAGGAGCAATCAGAGAACAAAGGTCCGAGCAGATACTGAGTGTTTGACCAAGGAGAAAGAGGTATTGAGGAAACAAGTTAATGGTTTAATTAGGAGAAGGAAGCTGAAAGAGGTGCAAAAGTTGTTGAAGAAAGAAGAATTTAAGGCTTGGGGTCGAGACACCCAGGCTAAGCTAGGAAGTCGTCTCATAGAATTGTTAATTGAATCAGCTTTCATTCAACCTCCAGTTAGCCAGTCAGCTGACAGTCCACCCGATATCCGACCTGCATTCTGGCATGGGTTTAAACCTGTTGCAAAAACTCCAGGGCAGAATTTTGTGAAGAAATATGGAGTTGTCGAATGCGATCCCATAGTTCTTGCTGGGCTTGACCGAACTGCGAAGCATATGTTAATTCCTTACATCCCTATGTTGGTTCCTCCTAAAAAATGGAAAGGGTATGATAAAGGTGGACACTTTTTCTTACCTTCATATGTCATGCGTACTCATGGATCAAGTAGGCAACAAGATGCCATGAAGAACATTTCTGGGAAACAGATGCAGAAAGTATTTGAGGCGCTGGATATGCTAGGGAGCACCAAGTGGAGGGTGAATAGAAGTGTACTCAGCGTGGTGGAGAGTCTTTGGGCTCAAGGTGGCAATACAGCAGGCCTTGTTGATCGCAAAGATGTTCCCATTCCAGAGAAGCCACTTGGGGATTTGACAGAAATGCAAGAATGGAGATGGAGCATGAAGAAGGCAAAGAAAATCAACCAAGAGTTGCATTCCCAACGATGTGATGTTGAACTTAAGCTTTCGGTTGCTCGCAAAATGAAGGATGAGGAAGGCTTTTATTACCCTCATAATCTTGATTTTCGTGGCCGAGCTTACCCAATGCATCCACATCTAAATCATTTGAGTTCTGATCTCTGTCGAGGAGTTCTCGAGTTTGCTGAAGGGCGACCTTTAGGAAAGTCTGGTTTGCATTGGCTAAAGATACATTTAGCTAATTTGTATGCTGGTGGTGTTGAAAAACTTTCCTATGACGAACGTCTAGCATTTGTGGATGACCATCTGGATAACATATTTGATTCTGCAAGTAACCCAGTCAATGGGGATCGTTGGTGGTTAACTGCTGAAGACCCTTTTCAATGCTTGGCTGCTTGTATGAATCTATCTGAAGCCCTAAAGAGCTCAGCACCACACACTGTCATTTCCTATCTGCCAATCCATCAGGATGGGTCATGCAATGGCTTACAGCACTATGCAGCTTTGGGAAGAGACACTTTGGAAGCAGCTGCCGTAAACTTAGTTGCTGGAGAAAAACCTGCTGATGTTTACTCGGAAATTGCTGCCAGGGTTCACACTATCATGATCAGGGATGCTAGCAAAGATCCAACGACAAATCCAAATGCTTCCCTGGCTAAGCTCCTCATTGATCAGGTTGATCGCAAACTGGTAAAGCAGACAGTGATGACTTCTGTATATGGTGTCACATATATTGGTGCTCGCGAACAAATTAAAAGAAGACTGGAGGAGAAAGGCCTTATATCTGATGATAGACTACGATTTAGAGCATCCTGTTATGCTGCTAAAGTGACGTTGTCTGCACTTGGAGAGATATTTGAAGCTGCACGTGGAATAATGGGTTGGCTTGGTGATTGCGCTAAGGTAATTGCTAAAGATAATCAGCCTGTGCGTTGGACCACTCCACTTGGTCTCCCTGTGGTACAACCATACTATAAAAGTGAACGGCATCTTATTAGGACATCTCTTCAAGTTTTAGCTTTACAGCGAGAGGGTAACTCGGTGGATGTTAGAAAGCAGAGAACTGCATTTCCGCCCAATTTTGTGCACTCTCTAGATGGTTCACATATGATGCTCACAGCTCTTGCCTGTAGGGATGCTGGCTTACGTTTTGCAGGGGTGCATGACTCCTTCTGGACACATGCCTGTGATGTAGACCGGATGAATCTGATACTAAGGGAAAAATTTGTGGAGCTTTATAGTATGCCAGTTCTTGAAAGTTTGCTTGAAGGCTTTGAAACAACATATCCAGGATTGACATTCCCTTCCCTCCCTGGGAGAGGCGATTTTGACTTGCAAGAGGTTCTAAAATCCCCTTACTTCTTCAACTGATTCTTCTGAACTCAACAGCAGGCATGACATTCTGCCGAAACATACTTTAGCAAAAACATGTATAGGAAACAATTTTGAGTAGTGGATGTAAGAGTGATACAAGAGACAAGAGCGAAGCCCAGAGCCAATTCGATCATGTCAGGAATTGTGAAACCATTCCAATTTGTTGCTCATCTCTTCAAGCTCTGCAATCCTGTCAGCACACTCTAATATCCTGCTGTCAAGGAAATGAACGTTTTCTCGGGTTGTCTTTGTAGCAGAACTTGATGGATACTCGCACAATCTGTGAGCTGAAAATGGTTCAGCCAAGACCGAAACTCGAGCAGGCGTCTTGTAGTTGGCAGCATTTTTTATCTGGCTTCTGACTTTGAGGGTTCATTTTCCTGCAGATGAGTATTCTTTTTCCCCACATCTACTGTATAAACCTTTTTTAGTATCAATTAGAAAGGAAAAGTAAGCTATTTGTTAGAAGCCTTTATTTTCACTTAGTAAGGAATGTAAGCTAAGCTATTAGAAGCCTTCATTTTGTCTGTGTATAGGTTCCCTAGTAAACTCTGTACTATATTCATTCAATAATTAAAGTAAGATATTTTTTTAAGCCCTA

Coding sequence (CDS)

ATGACAGCCACGGCCTCCTTCTTCCCAACTCTTCAAGCTCCAATTCATGGCAGCAATGCATGGAAGAAGCCCACTAAGAGATGGAAATGCGAAAGAAAAACCCACCCATCATTCACCTCAACCTTCAATTCCCCTCTTTCTTCTGTTTCTTTCCCCGTAAACTTCGATTCCACTTCCCAATCACTCCATCTTCAACCTCTAGCTGATTCAGTTCATGAAAATTTCACGGAAACTCTCGATAATTCCATGAATTTGCAGATACCCATTAGCGAAATTCACCAGATAACTCGAGGGGAATCTAGTAAAAGAATCTTCATTCAGGATCCGCCATGGATAGCTTCCTTGTTCTTGAAGGGGCTTTACAAATGCGTTCAGAAGGAAGTGAAATTAGAATTTATGGAGATTGAGAAGAGGAAGTATAATTTGCTGAGGAGGAGACAGATTAAGGCGGAGACAGAGGCTTGGGAAAAGATGGTTGAGGAGTATAAGGAGTTAGAGAAAGAAATGTGCGAGAAGAAATTAGCACCGAATTTGCCTTATGTGAAGAAATTGTTTCTGGGTTGGTTTGAGCCATTGAAGAATGCTATAGAGGAGGAGCAAAAAACGCAGAGGAGTAAGAAGCAGAAGGCGGCATTTGCACCTCATATAGAGTTATTATCTGCAGATAAAATGGCGGTTATTGTGATGTACAAGATGATGGGATTGTTGATGATGGCGGCGCAAGATGGCTGCGTTCAGGTCGTTCAGGCTGCGGTCCAGATTGGTGGTGCTATAGAGCAAGAGGTTAGAATTCAGAGCATTCTGGAGAAGGCTAGGAGCAATCAGAGAACAAAGGTCCGAGCAGATACTGAGTGTTTGACCAAGGAGAAAGAGGTATTGAGGAAACAAGTTAATGGTTTAATTAGGAGAAGGAAGCTGAAAGAGGTGCAAAAGTTGTTGAAGAAAGAAGAATTTAAGGCTTGGGGTCGAGACACCCAGGCTAAGCTAGGAAGTCGTCTCATAGAATTGTTAATTGAATCAGCTTTCATTCAACCTCCAGTTAGCCAGTCAGCTGACAGTCCACCCGATATCCGACCTGCATTCTGGCATGGGTTTAAACCTGTTGCAAAAACTCCAGGGCAGAATTTTGTGAAGAAATATGGAGTTGTCGAATGCGATCCCATAGTTCTTGCTGGGCTTGACCGAACTGCGAAGCATATGTTAATTCCTTACATCCCTATGTTGGTTCCTCCTAAAAAATGGAAAGGGTATGATAAAGGTGGACACTTTTTCTTACCTTCATATGTCATGCGTACTCATGGATCAAGTAGGCAACAAGATGCCATGAAGAACATTTCTGGGAAACAGATGCAGAAAGTATTTGAGGCGCTGGATATGCTAGGGAGCACCAAGTGGAGGGTGAATAGAAGTGTACTCAGCGTGGTGGAGAGTCTTTGGGCTCAAGGTGGCAATACAGCAGGCCTTGTTGATCGCAAAGATGTTCCCATTCCAGAGAAGCCACTTGGGGATTTGACAGAAATGCAAGAATGGAGATGGAGCATGAAGAAGGCAAAGAAAATCAACCAAGAGTTGCATTCCCAACGATGTGATGTTGAACTTAAGCTTTCGGTTGCTCGCAAAATGAAGGATGAGGAAGGCTTTTATTACCCTCATAATCTTGATTTTCGTGGCCGAGCTTACCCAATGCATCCACATCTAAATCATTTGAGTTCTGATCTCTGTCGAGGAGTTCTCGAGTTTGCTGAAGGGCGACCTTTAGGAAAGTCTGGTTTGCATTGGCTAAAGATACATTTAGCTAATTTGTATGCTGGTGGTGTTGAAAAACTTTCCTATGACGAACGTCTAGCATTTGTGGATGACCATCTGGATAACATATTTGATTCTGCAAGTAACCCAGTCAATGGGGATCGTTGGTGGTTAACTGCTGAAGACCCTTTTCAATGCTTGGCTGCTTGTATGAATCTATCTGAAGCCCTAAAGAGCTCAGCACCACACACTGTCATTTCCTATCTGCCAATCCATCAGGATGGGTCATGCAATGGCTTACAGCACTATGCAGCTTTGGGAAGAGACACTTTGGAAGCAGCTGCCGTAAACTTAGTTGCTGGAGAAAAACCTGCTGATGTTTACTCGGAAATTGCTGCCAGGGTTCACACTATCATGATCAGGGATGCTAGCAAAGATCCAACGACAAATCCAAATGCTTCCCTGGCTAAGCTCCTCATTGATCAGGTTGATCGCAAACTGGTAAAGCAGACAGTGATGACTTCTGTATATGGTGTCACATATATTGGTGCTCGCGAACAAATTAAAAGAAGACTGGAGGAGAAAGGCCTTATATCTGATGATAGACTACGATTTAGAGCATCCTGTTATGCTGCTAAAGTGACGTTGTCTGCACTTGGAGAGATATTTGAAGCTGCACGTGGAATAATGGGTTGGCTTGGTGATTGCGCTAAGGTAATTGCTAAAGATAATCAGCCTGTGCGTTGGACCACTCCACTTGGTCTCCCTGTGGTACAACCATACTATAAAAGTGAACGGCATCTTATTAGGACATCTCTTCAAGTTTTAGCTTTACAGCGAGAGGGTAACTCGGTGGATGTTAGAAAGCAGAGAACTGCATTTCCGCCCAATTTTGTGCACTCTCTAGATGGTTCACATATGATGCTCACAGCTCTTGCCTGTAGGGATGCTGGCTTACGTTTTGCAGGGGTGCATGACTCCTTCTGGACACATGCCTGTGATGTAGACCGGATGAATCTGATACTAAGGGAAAAATTTGTGGAGCTTTATAGTATGCCAGTTCTTGAAAGTTTGCTTGAAGGCTTTGAAACAACATATCCAGGATTGACATTCCCTTCCCTCCCTGGGAGAGGCGATTTTGACTTGCAAGAGGTTCTAAAATCCCCTTACTTCTTCAACTGA

Protein sequence

MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHPSFTSTFNSPLSSVSFPVNFDSTSQSLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGLYKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAAQDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQEVLKSPYFFN*

Homology

[Close]

BLAST of CSPI02G05320 vs. ExPASy Swiss-Prot
Match: P69243 (DNA-directed RNA polymerase 3A, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPOT3-SYL PE=3 SV=1)

HSP 1 Score: 1372.5 bits (3551), Expect = 0.0e+00
Identity = 686/992 (69.15%), Postives = 822/992 (82.86%), Query Frame = 0


Query: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCER-----KTHPSFTSTFNSPLSSVSFPV-N 60
           M +TAS+ P+             PT +W+ ++       +      F     S S P  +
Sbjct: 1   MASTASYSPS-------------PTSQWRTQKLPKRFNFYVIHNQEFGKLSQSSSLPTSS 60

Query: 61  FDSTSQSLHLQ-PLADSVHENFTETLDNSMNLQIPISEIHQITRG----ESSKRIFIQDP 120
           F  T +   +Q P+ +++    T  +    NL+  +  + +I  G    ES+KR+FIQDP
Sbjct: 61  FPKTLKLPVIQMPINNNIQSQTTVCVSTDENLE-ELVNLQKIANGVLTKESNKRVFIQDP 120

Query: 121 PWIASLFLKGLY---KCVQKEVKLEFMEIE-KRKYNLLRRRQIKAETEAWEKMVEEYKEL 180
           PW++SLF+  L+   K VQ  V+ EF EIE +R+Y +LRRRQIKAETEAWE+MVEEY+EL
Sbjct: 121 PWVSSLFMNSLFVRAKQVQ-GVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYREL 180

Query: 181 EKEMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMA 240
           E+EMCEKKLAPNLPYVKKL LGWFEPL+ AIE+EQ  + + K +AAFAPHI+ L ADKMA
Sbjct: 181 EREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADKMA 240

Query: 241 VIVMYKMMGLLMMAA-QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADT- 300
           VIVM+K+MGLLMM   ++ CVQVVQAAVQIG A+E EVRI + LEK +  Q+    A + 
Sbjct: 241 VIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGAQSQ 300

Query: 301 ECLTKEKEVLRKQVNGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFI 360
           E +++E  +LRK+V  LI+R ++ EV+KL+K EE ++WGRDTQAKLG RL+ELL E+A++
Sbjct: 301 EDMSRETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTETAYV 360

Query: 361 QPPVSQSADSPPDIRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIP 420
           QPPV QSAD+PPDIRPAF H F+   + PG++ VKKYGV+ECDP+V+AG+DRT K M+IP
Sbjct: 361 QPPVDQSADTPPDIRPAFRHVFRIATRDPGKSIVKKYGVIECDPLVVAGVDRTVKQMMIP 420

Query: 421 YIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGST 480
           Y+PMLVPPKKW+GYDKGG+ FLPSY+MRTHGS RQQDA++++  KQMQ+V+EALD LGST
Sbjct: 421 YVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPTKQMQQVYEALDTLGST 480

Query: 481 KWRVNRSVLSVVESLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQE 540
           KWRVN+ +LSVVES+WA GGN AGLVDRKDVPIPE    D+ E+++W+W ++K+KKINQE
Sbjct: 481 KWRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMEVKKWKWRVRKSKKINQE 540

Query: 541 LHSQRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEG 600
           LHSQRCD ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEG
Sbjct: 541 LHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEG 600

Query: 601 RPLGKSGLHWLKIHLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAE 660
           RPLGKSGL WLKIHLA+LYAGG+EKL YD RLAFV++H+D+I DSA+NP+NG+RWWL AE
Sbjct: 601 RPLGKSGLRWLKIHLASLYAGGIEKLCYDARLAFVENHIDDILDSANNPLNGNRWWLNAE 660

Query: 661 DPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAG 720
           DPFQCLAAC+NLSEALKSS+PHTV S+LPIHQDGSCNGLQHYAALGRD++EAAAVNLVAG
Sbjct: 661 DPFQCLAACINLSEALKSSSPHTVFSHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAG 720

Query: 721 EKPADVYSEIAARVHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTY 780
           +KPADVY+EIA RV  I+  D+ KDP T+PNA LAKLLIDQVDRKLVKQTVMTSVYGVTY
Sbjct: 721 DKPADVYTEIALRVDHIIRGDSIKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTY 780

Query: 781 IGAREQIKRRLEEKGLISDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIA 840
           +GAREQIKRRLEEKGLI DDRL F ASCYAAKVTL+ALGE+F+AARG M WLGDCAKVIA
Sbjct: 781 VGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIA 840

Query: 841 KDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHS 900
            +NQPVRWTTPLGLPVVQPY+K++RH+IRTSLQVLALQREG++V+VRKQRTAFPPNFVHS
Sbjct: 841 SENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDTVEVRKQRTAFPPNFVHS 900

Query: 901 LDGSHMMLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEG 960
           LDGSHMM+TA+ACRDAGL+FAGVHDSFWTHACDVD+MN ILREKFVELYSMP+LE LLE 
Sbjct: 901 LDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLES 960

Query: 961 FETTYPGLTFPSLPGRGDFDLQEVLKSPYFFN 976
           F+ +YP LTFP LP RGDFDL EVL+SPYFFN
Sbjct: 961 FQNSYPALTFPPLPKRGDFDLVEVLESPYFFN 977

[Close]

BLAST of CSPI02G05320 vs. ExPASy Swiss-Prot
Match: P69242 (DNA-directed RNA polymerase 3, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=RPOT3 PE=2 SV=1)

HSP 1 Score: 1372.5 bits (3551), Expect = 0.0e+00
Identity = 686/992 (69.15%), Postives = 822/992 (82.86%), Query Frame = 0


Query: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCER-----KTHPSFTSTFNSPLSSVSFPV-N 60
           M +TAS+ P+             PT +W+ ++       +      F     S S P  +
Sbjct: 1   MASTASYSPS-------------PTSQWRTQKLPKRFNFYVIHNQEFGKLSQSSSLPTSS 60

Query: 61  FDSTSQSLHLQ-PLADSVHENFTETLDNSMNLQIPISEIHQITRG----ESSKRIFIQDP 120
           F  T +   +Q P+ +++    T  +    NL+  +  + +I  G    ES+KR+FIQDP
Sbjct: 61  FPKTLKLPVIQMPINNNIQSQTTVCVSTDENLE-ELVNLQKIANGVLTKESNKRVFIQDP 120

Query: 121 PWIASLFLKGLY---KCVQKEVKLEFMEIE-KRKYNLLRRRQIKAETEAWEKMVEEYKEL 180
           PW++SLF+  L+   K VQ  V+ EF EIE +R+Y +LRRRQIKAETEAWE+MVEEY+EL
Sbjct: 121 PWVSSLFMNSLFVRAKQVQ-GVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYREL 180

Query: 181 EKEMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMA 240
           E+EMCEKKLAPNLPYVKKL LGWFEPL+ AIE+EQ  + + K +AAFAPHI+ L ADKMA
Sbjct: 181 EREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADKMA 240

Query: 241 VIVMYKMMGLLMMAA-QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADT- 300
           VIVM+K+MGLLMM   ++ CVQVVQAAVQIG A+E EVRI + LEK +  Q+    A + 
Sbjct: 241 VIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGAQSQ 300

Query: 301 ECLTKEKEVLRKQVNGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFI 360
           E +++E  +LRK+V  LI+R ++ EV+KL+K EE ++WGRDTQAKLG RL+ELL E+A++
Sbjct: 301 EDMSRETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTETAYV 360

Query: 361 QPPVSQSADSPPDIRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIP 420
           QPPV QSAD+PPDIRPAF H F+   + PG++ VKKYGV+ECDP+V+AG+DRT K M+IP
Sbjct: 361 QPPVDQSADTPPDIRPAFRHVFRIATRDPGKSIVKKYGVIECDPLVVAGVDRTVKQMMIP 420

Query: 421 YIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGST 480
           Y+PMLVPPKKW+GYDKGG+ FLPSY+MRTHGS RQQDA++++  KQMQ+V+EALD LGST
Sbjct: 421 YVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPTKQMQQVYEALDTLGST 480

Query: 481 KWRVNRSVLSVVESLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQE 540
           KWRVN+ +LSVVES+WA GGN AGLVDRKDVPIPE    D+ E+++W+W ++K+KKINQE
Sbjct: 481 KWRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMEVKKWKWRVRKSKKINQE 540

Query: 541 LHSQRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEG 600
           LHSQRCD ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEG
Sbjct: 541 LHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEG 600

Query: 601 RPLGKSGLHWLKIHLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAE 660
           RPLGKSGL WLKIHLA+LYAGG+EKL YD RLAFV++H+D+I DSA+NP+NG+RWWL AE
Sbjct: 601 RPLGKSGLRWLKIHLASLYAGGIEKLCYDARLAFVENHIDDILDSANNPLNGNRWWLNAE 660

Query: 661 DPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAG 720
           DPFQCLAAC+NLSEALKSS+PHTV S+LPIHQDGSCNGLQHYAALGRD++EAAAVNLVAG
Sbjct: 661 DPFQCLAACINLSEALKSSSPHTVFSHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAG 720

Query: 721 EKPADVYSEIAARVHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTY 780
           +KPADVY+EIA RV  I+  D+ KDP T+PNA LAKLLIDQVDRKLVKQTVMTSVYGVTY
Sbjct: 721 DKPADVYTEIALRVDHIIRGDSIKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTY 780

Query: 781 IGAREQIKRRLEEKGLISDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIA 840
           +GAREQIKRRLEEKGLI DDRL F ASCYAAKVTL+ALGE+F+AARG M WLGDCAKVIA
Sbjct: 781 VGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIA 840

Query: 841 KDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHS 900
            +NQPVRWTTPLGLPVVQPY+K++RH+IRTSLQVLALQREG++V+VRKQRTAFPPNFVHS
Sbjct: 841 SENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDTVEVRKQRTAFPPNFVHS 900

Query: 901 LDGSHMMLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEG 960
           LDGSHMM+TA+ACRDAGL+FAGVHDSFWTHACDVD+MN ILREKFVELYSMP+LE LLE 
Sbjct: 901 LDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLES 960

Query: 961 FETTYPGLTFPSLPGRGDFDLQEVLKSPYFFN 976
           F+ +YP LTFP LP RGDFDL EVL+SPYFFN
Sbjct: 961 FQNSYPALTFPPLPKRGDFDLVEVLESPYFFN 977

[Close]

BLAST of CSPI02G05320 vs. ExPASy Swiss-Prot
Match: Q8L6J1 (DNA-directed RNA polymerase 3B, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPOT3-TOM PE=2 SV=2)

HSP 1 Score: 1359.4 bits (3517), Expect = 0.0e+00
Identity = 687/995 (69.05%), Postives = 822/995 (82.61%), Query Frame = 0


Query: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCER-----KTHPSFTSTF-----NSPLSSVS 60
           M +TAS+ P+             PT +W+ ++       +      F     +S LS+ S
Sbjct: 1   MASTASYSPS-------------PTSQWRTQKLPKRFNFYVIHNQEFGKLSQSSSLSTSS 60

Query: 61  FPVNFDSTSQSLHLQPLAD--SVHENFTETLDNSMNLQ-IPISEIHQITRGESSKRIFIQ 120
           FP         + +  +    +V  +  E L+  +NLQ IP   +++    ES+KR+FIQ
Sbjct: 61  FPKTLKLPVIHMPINNIQSQTTVCVSTDENLEELVNLQKIPNGFLNK----ESNKRVFIQ 120

Query: 121 DPPWIASLFLKGLY---KCVQKEVKLEFMEIE-KRKYNLLRRRQIKAETEAWEKMVEEYK 180
           DPPW++SLF+  L+   K VQ  V+ EF EIE +R+Y +LRRRQIKAETEAWE+MVEEY+
Sbjct: 121 DPPWVSSLFMNSLFVRAKQVQ-GVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYR 180

Query: 181 ELEKEMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADK 240
           ELE+EMCEKKLAPNLPYVKKL LGWFEPL+ AIE+EQ  + + K +AAFAPHI+ L ADK
Sbjct: 181 ELEREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADK 240

Query: 241 MAVIVMYKMMGLLMMAA-QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRAD 300
           MAVIVM+K+MGLLMM   ++ CVQVVQAAVQIG A+E EVRI + LEK +  Q+    A 
Sbjct: 241 MAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGAQ 300

Query: 301 T-ECLTKEKEVLRKQVNGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESA 360
           + E ++KE  +LRK+V  LI+R ++ EV+KL+K EE ++WGRDTQAKLG RL+ELL E+A
Sbjct: 301 SQEDMSKETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTETA 360

Query: 361 FIQPPVSQSADSPPDIRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHML 420
           ++Q PV QSAD+PPDIRPAF H FK   + PG+N VKKYGV+ECDP+V+AG+DRT K M+
Sbjct: 361 YVQRPVDQSADTPPDIRPAFRHVFKIATRDPGKNIVKKYGVIECDPLVVAGVDRTVKQMM 420

Query: 421 IPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLG 480
           IPY+PMLVPPKKW+GYDKGG+ FLPSY+MRTHGS RQQDA++ +  KQMQ+V+EALD LG
Sbjct: 421 IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRGVPTKQMQQVYEALDTLG 480

Query: 481 STKWRVNRSVLSVVESLWAQGGNTAGLVDRKDVPIPE-KPLGDLTEMQEWRWSMKKAKKI 540
           STKWRVN+ +L+VVES+WA GGN AGLVDRKDVPIPE     D+ E+++W+W ++K+KKI
Sbjct: 481 STKWRVNKRILNVVESIWAGGGNIAGLVDRKDVPIPELSNSDDIMEVKKWKWKVRKSKKI 540

Query: 541 NQELHSQRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEF 600
           NQELHSQRCD ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEF
Sbjct: 541 NQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEF 600

Query: 601 AEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWL 660
           AEGRPLGKSGL WLKIHLA+LYAGGVEKL YD RLAFV++H+ +I DSA+NP+NG+RWWL
Sbjct: 601 AEGRPLGKSGLRWLKIHLASLYAGGVEKLCYDARLAFVENHIHDILDSANNPLNGNRWWL 660

Query: 661 TAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNL 720
            AEDPFQCLAAC+NLSEALKSS+PHTVIS+LPIHQDGSCNGLQHYAALGRD++EAAAVNL
Sbjct: 661 NAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNL 720

Query: 721 VAGEKPADVYSEIAARVHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYG 780
           VAGEKPADVY+EIA RV  I+  D+ KDP  +PNA LAKLLIDQVDRKLVKQTVMTSVYG
Sbjct: 721 VAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLIDQVDRKLVKQTVMTSVYG 780

Query: 781 VTYIGAREQIKRRLEEKGLISDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAK 840
           VTY+GAREQIKRRLEEKGLI DDRL F ASCYAAKVTL+ALGE+F+AARG M WLGDCAK
Sbjct: 781 VTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAK 840

Query: 841 VIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNF 900
           VIA +NQPVRWTTPLGLPVVQPY+K++RH+IRTSLQ+LALQREG++V+VRKQRTAFPPNF
Sbjct: 841 VIALENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQILALQREGDAVEVRKQRTAFPPNF 900

Query: 901 VHSLDGSHMMLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESL 960
           VHSLDGSHMM+TA+ACRDAGL+FAGVHDSFWTHACDVD+MN ILREKFVELYS+P+LE L
Sbjct: 901 VHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSLPILEDL 960

Query: 961 LEGFETTYPGLTFPSLPGRGDFDLQEVLKSPYFFN 976
           LE F+ +YP LTFP LP RGDF+L+EVL+SPYFFN
Sbjct: 961 LENFQKSYPALTFPPLPKRGDFNLREVLESPYFFN 977

[Close]

BLAST of CSPI02G05320 vs. ExPASy Swiss-Prot
Match: O24600 (DNA-directed RNA polymerase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPOT3 PE=2 SV=1)

HSP 1 Score: 1357.8 bits (3513), Expect = 0.0e+00
Identity = 673/970 (69.38%), Postives = 805/970 (82.99%), Query Frame = 0


Query: 21  WKKPTKRWKCERKTHPSFTSTFNSPLSSVSFPVNFDSTSQSLHLQPLADSV--HENFTET 80
           W KP       R+    F    + P+S+ S   +  STS S+H +P+++SV  H N  E+
Sbjct: 28  WLKPPPSSALFRRKTLPFFERHSLPISASSSSSSSSSTSLSVHEKPISNSVHFHGNLIES 87

Query: 81  LDN-------SMNLQIPISEI-HQITRGESS--KRIFIQDPPWIASLFLKGLYKCVQKEV 140
            +N       ++     I E+ + + R   S  +R+F+QDPPWI++LFLKGL K V + +
Sbjct: 88  FENQDSSYAGTIKGASLIEELENPVERNGLSGRRRLFMQDPPWISALFLKGLSKMVDQTL 147

Query: 141 KLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAPNLPYVKKLFLGW 200
           K+E  +I+KRK++ LRRRQ+K ETEAWE+MV+EY++LEKEMCEK LAPNLPYVK +FLGW
Sbjct: 148 KIERKDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGW 207

Query: 201 FEPLKNAIEEEQKTQ--RSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAAQDGCVQ 260
           F+PLK+ IE EQK Q  +SKK +AA+APHIELL ADKMAVIVM+KMMGL+M   +DGC+Q
Sbjct: 208 FQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCIQ 267

Query: 261 VVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGLIRRRKL 320
           VVQAAV IG AIEQEVRI + L++ R N       D++   KEK++LRK+VN LIRR+++
Sbjct: 268 VVQAAVSIGIAIEQEVRIHNFLKRTRKNN----AGDSQEELKEKQLLRKRVNSLIRRKRI 327

Query: 321 KEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHGFK 380
            +  K++K E  K WGR TQAKLGSRL+ELLIE+A++QPP++QS DS P+ RPAF H FK
Sbjct: 328 IDALKVVKSEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHRFK 387

Query: 381 PVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLP 440
            V K PG   V++YGV+ECD ++LAGLD++AKHMLIPY+PMLVPPK+WKGYDKGG+ FLP
Sbjct: 388 TVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLFLP 447

Query: 441 SYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQGGNTA 500
           SY+MRTHGS +QQDA+K+IS K   +VFEALD LG+TKWRVNR++L VVE LWA GGN A
Sbjct: 448 SYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGNIA 507

Query: 501 GLVDRKDVPIPEKPLG-DLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEE 560
           GLV+R+DVPIPEKP   D  E+Q W+WS +KA KIN+E HS RCDVELKLSVARKMKDEE
Sbjct: 508 GLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKDEE 567

Query: 561 GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGG 620
           GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFAEGRPLGKSGLHWLKIHLANLYAGG
Sbjct: 568 GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGG 627

Query: 621 VEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPH 680
           VEKLS+D RLAFV++HLD+I DSA NP++G RWWL AEDPFQCLAAC+ L++ALKS +P+
Sbjct: 628 VEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPY 687

Query: 681 TVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDA 740
           +VIS+LPIHQDGSCNGLQHYAALGRD+ EAAAVNLVAGEKPADVYSEI+ RVH IM +D+
Sbjct: 688 SVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDS 747

Query: 741 SKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRL 800
           SKDP +NP A+LAK+LI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLEEKG+I+D+R+
Sbjct: 748 SKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERM 807

Query: 801 RFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYK 860
            F A+CY+AKVTL+ALGEIFEAAR IM WLGDCAK+IA DN PVRW TPLGLPVVQPY +
Sbjct: 808 LFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCR 867

Query: 861 SERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAG 920
           SERHLIRTSLQVLALQREGN+VDVRKQRTAFPPNFVHSLDG+HMM+TA+ACR+AGL FAG
Sbjct: 868 SERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAG 927

Query: 921 VHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQ 976
           VHDS+WTHACDVD MN ILREKFVELY+ P+LE LL+ F+ +YP L FP +P RGDFDL+
Sbjct: 928 VHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGDFDLK 987

[Close]

BLAST of CSPI02G05320 vs. ExPASy Swiss-Prot
Match: Q8L6J3 (DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT2-TOM PE=2 SV=2)

HSP 1 Score: 1155.2 bits (2987), Expect = 0.0e+00
Identity = 560/842 (66.51%), Postives = 689/842 (81.83%), Query Frame = 0


Query: 138  RKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAPNLPYVKKLFLGWFEPLKNAIE 197
            RKY  L+RRQ+K ETEAWE+  +EYKEL  +MCE+KLAPNLPYVK LFLGWFEPL++ I 
Sbjct: 181  RKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIA 240

Query: 198  EEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAAQDGCVQVVQAAVQIGGA 257
            EEQ+     K KAA+A ++  L AD MAVI M+K+MGLLM     G  +VVQAA+ IG A
Sbjct: 241  EEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDA 300

Query: 258  IEQEVRIQSILEKARSN--QRTKVRADTECLTKEKEVLRKQVNGLIRRRKLKEVQKLLKK 317
            IEQEVRI + LEK +    ++ K + D E +T+E+E LRK+V  L++++KL+ V +++++
Sbjct: 301  IEQEVRIHNFLEKTKKQKAEKDKQKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRR 360

Query: 318  -EEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHGFKPVAKTPGQ 377
             ++ K WG+D +AK+GSRLIELL+++A+IQPP +Q A  PPDIRPAF H  + VAK   +
Sbjct: 361  QDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKET-K 420

Query: 378  NFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHG 437
            +  ++YG+++CD +V  GL+RTA+HM+IPY+PMLVPP KW GYDKGGH +LPSYVMRTHG
Sbjct: 421  SASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHG 480

Query: 438  SSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQGGNTAGLVDRKDV 497
            + +Q++A+K  S  Q+Q VFEALD LGSTKWR+N+ VLSV++ +WA GG  A LVDR D 
Sbjct: 481  ARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDA 540

Query: 498  PIPEKP-LGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHNL 557
            P+PE+P   D     +WRW +K  KK N+E HSQRCD+ELKL+VARKMKDEEGF+YPHN+
Sbjct: 541  PLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNV 600

Query: 558  DFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDE 617
            DFRGRAYPMHPHLNHL SD+CRGVL FAEGRPLG+SGL WLKIHLANL+AGGVEKLS + 
Sbjct: 601  DFRGRAYPMHPHLNHLGSDICRGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEG 660

Query: 618  RLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPI 677
            R+AF ++H+D+IFDSA  P+ G RWWL AEDPFQCLA C+NLSEA++SS+P T IS++P+
Sbjct: 661  RIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPV 720

Query: 678  HQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDPTTNP 737
            HQDGSCNGLQHYAALGRD L AAAVNLVAGEKPADVYS IAARV  IM RDA +DP   P
Sbjct: 721  HQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFP 780

Query: 738  NASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRLRFRASCYA 797
            +A  A+ L++QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRL+E+G I+DD   F A+CYA
Sbjct: 781  DAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYA 840

Query: 798  AKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRT 857
            AKVTL+ALGE+FEAAR IM WLG+CAK+IA +N+PVRWTTPLGLPVVQPY K  RHLI+T
Sbjct: 841  AKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKT 900

Query: 858  SLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAGVHDSFWTH 917
            SLQ+L LQ+E   V V++QRTAFPPNF+HSLDGSHMM+TA+ACR AGL FAGVHDS+WTH
Sbjct: 901  SLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTH 960

Query: 918  ACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQEVLKSPYF 976
            ACDVD++N ILREKFVELY  P+LE LLE F+T+YP L FP LP RGDFDL++VL+SPYF
Sbjct: 961  ACDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYF 1020

[Close]

BLAST of CSPI02G05320 vs. ExPASy TrEMBL
Match: A0A0A0LH38 (DNA-directed RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_2G036610 PE=3 SV=1)

HSP 1 Score: 1951.4 bits (5054), Expect = 0.0e+00
Identity = 972/975 (99.69%), Postives = 973/975 (99.79%), Query Frame = 0


Query: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHPSFTSTFNSPLSSVSFPVNFDSTSQ 60
           MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTH SFTSTFNSPLSSVSFPVNFDSTSQ
Sbjct: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHTSFTSTFNSPLSSVSFPVNFDSTSQ 60

Query: 61  SLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGL 120
           SLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGL
Sbjct: 61  SLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGL 120

Query: 121 YKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAPNLPY 180
           YKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELE+EMCEKKLAPNLPY
Sbjct: 121 YKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPY 180

Query: 181 VKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAA 240
           VKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAA
Sbjct: 181 VKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAA 240

Query: 241 QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGL 300
           QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGL
Sbjct: 241 QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGL 300

Query: 301 IRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPA 360
           IRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPA
Sbjct: 301 IRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPA 360

Query: 361 FWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKG 420
           FWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKG
Sbjct: 361 FWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKG 420

Query: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWA 480
           GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWA
Sbjct: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWA 480

Query: 481 QGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
           QGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK
Sbjct: 481 QGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540

Query: 541 MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
           MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN
Sbjct: 541 MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600

Query: 601 LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
           LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK
Sbjct: 601 LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660

Query: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
           SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI
Sbjct: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720

Query: 721 MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI 780
           MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI
Sbjct: 721 MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI 780

Query: 781 SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
           SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV
Sbjct: 781 SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840

Query: 841 QPYYKSERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
           QPYYKSERHLIRTSLQVLALQREGN VDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG
Sbjct: 841 QPYYKSERHLIRTSLQVLALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900

Query: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRG 960
           LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRG
Sbjct: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRG 960

Query: 961 DFDLQEVLKSPYFFN 976
           DFDLQEVLKSPYFFN
Sbjct: 961 DFDLQEVLKSPYFFN 975

[Close]

BLAST of CSPI02G05320 vs. ExPASy TrEMBL
Match: A0A1S3BU26 (DNA-directed RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103493541 PE=3 SV=1)

HSP 1 Score: 1879.8 bits (4868), Expect = 0.0e+00
Identity = 931/975 (95.49%), Postives = 953/975 (97.74%), Query Frame = 0


Query: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHPSFTSTFNSPLSSVSFPVNFDSTSQ 60
           MT TASFFPTLQAPIHGSNAWKKPTKRWKCERKT  SFTSTFNS LSSVSFP+NFDSTSQ
Sbjct: 1   MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ 60

Query: 61  SLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGL 120
             HLQPLADSVHENFTETLDNSMNLQIP SEIHQITR ES +RIFIQDPPWIASLFLKGL
Sbjct: 61  PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITREESGQRIFIQDPPWIASLFLKGL 120

Query: 121 YKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAPNLPY 180
           YKCVQKEVKLEFM+IEKRKYNLLRRRQIKAETEAWEKMV+EYKELE+EMCEKKLAPNLPY
Sbjct: 121 YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY 180

Query: 181 VKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAA 240
           VK LFLGWFEPLK AIE+EQKTQRSKKQKAAFAPHIELLSADK+AVIVMYKMMGLLM+A 
Sbjct: 181 VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ 240

Query: 241 QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGL 300
           QD CVQVVQAAVQIGGAIEQEVRIQS LEKARSNQRTKV ADTECL+KEKEVLRK+VNG 
Sbjct: 241 QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGF 300

Query: 301 IRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPA 360
           IRRR+LKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD+RPA
Sbjct: 301 IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA 360

Query: 361 FWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKG 420
           FWHGFKPVAKTPGQNFVKKYGV+ECDPIVLAGLD+TAKHMLIPYIPMLVPPKKWKGYDKG
Sbjct: 361 FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG 420

Query: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWA 480
           GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNR VLSVVESLWA
Sbjct: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA 480

Query: 481 QGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
           QGGNTAGLVDRKDVPIPEK LGDLTE QEWRWSMKKAKKINQELHSQRCDVELKLSVARK
Sbjct: 481 QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540

Query: 541 MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
           MKDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN
Sbjct: 541 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600

Query: 601 LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
           LYAGGVEKLSYD RLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK
Sbjct: 601 LYAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660

Query: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
           SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI
Sbjct: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720

Query: 721 MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI 780
           MIRDA+KDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTY+GAREQIK+RLEEKGLI
Sbjct: 721 MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI 780

Query: 781 SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
           SDDRL FRASCYAAKVTL+ALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV
Sbjct: 781 SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840

Query: 841 QPYYKSERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
           QPYYKSERHLIRTSLQVLAL+REGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG
Sbjct: 841 QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900

Query: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRG 960
           LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLP RG
Sbjct: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG 960

Query: 961 DFDLQEVLKSPYFFN 976
           DF+LQEVL+SPYFFN
Sbjct: 961 DFNLQEVLRSPYFFN 975

[Close]

BLAST of CSPI02G05320 vs. ExPASy TrEMBL
Match: A0A5D3BDV2 (DNA-directed RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00250 PE=3 SV=1)

HSP 1 Score: 1866.3 bits (4833), Expect = 0.0e+00
Identity = 926/968 (95.66%), Postives = 947/968 (97.83%), Query Frame = 0


Query: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHPSFTSTFNSPLSSVSFPVNFDSTSQ 60
           MT TASFFPTLQAPIHGSNAWKKPTKRWKCERKT  SFTSTFNS LSSVSFP+NFDSTSQ
Sbjct: 1   MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ 60

Query: 61  SLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGL 120
             HLQPLADSVHENFTETLDNSMNLQIP SEIHQITRGES +RIFIQDPPWIASLFLKGL
Sbjct: 61  PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLFLKGL 120

Query: 121 YKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAPNLPY 180
           YKCVQKEVKLEFM+IEKRKYNLLRRRQIKAETEAWEKMV+EYKELE+EMCEKKLAPNLPY
Sbjct: 121 YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY 180

Query: 181 VKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAA 240
           VK LFLGWFEPLK AIE+EQKTQRSKKQKAAFAPHIELLSADK+AVIVMYKMMGLLM+A 
Sbjct: 181 VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ 240

Query: 241 QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGL 300
           QD CVQVVQAAVQIGGAIEQEVRIQS LEKARSNQRTKV ADTECL+KEKEVLRK+VNGL
Sbjct: 241 QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGL 300

Query: 301 IRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPA 360
           IRRR+LKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD+RPA
Sbjct: 301 IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA 360

Query: 361 FWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKG 420
           FWHGFKPVAKTPGQNFVKKYGV+ECDPIVLAGLD+TAKHMLIPYIPMLVPPKKWKGYDKG
Sbjct: 361 FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG 420

Query: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWA 480
           GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNR VLSVVESLWA
Sbjct: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA 480

Query: 481 QGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
           QGGNTAGLVDRKDVPIPEK LGDLTE QEWRWSMKKAKKINQELHSQRCDVELKLSVARK
Sbjct: 481 QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540

Query: 541 MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
           MKDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN
Sbjct: 541 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600

Query: 601 LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
           L+AGGVEKLSYD RLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK
Sbjct: 601 LHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660

Query: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
           SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI
Sbjct: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720

Query: 721 MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI 780
           MIRDA+KDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTY+GAREQIK+RLEEKGLI
Sbjct: 721 MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI 780

Query: 781 SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
           SDDRL FRASCYAAKVTL+ALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV
Sbjct: 781 SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840

Query: 841 QPYYKSERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
           QPYYKSERHLIRTSLQVLAL+REGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG
Sbjct: 841 QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900

Query: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRG 960
           LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLP RG
Sbjct: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG 960

Query: 961 DFDLQEVL 969
           DFDLQE L
Sbjct: 961 DFDLQENL 968

[Close]

BLAST of CSPI02G05320 vs. ExPASy TrEMBL
Match: A0A6J1E061 (DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111024704 PE=3 SV=1)

HSP 1 Score: 1777.7 bits (4603), Expect = 0.0e+00
Identity = 883/979 (90.19%), Postives = 927/979 (94.69%), Query Frame = 0


Query: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHPSFTSTF----NSPLSSVSFPVNFD 60
           MT+TASFFPTLQAPI+G NAW+KPTKR  CER+TH SFTSTF    NSPLSSVSFP N D
Sbjct: 1   MTSTASFFPTLQAPIYGGNAWRKPTKRCNCERRTHLSFTSTFNSLSNSPLSSVSFPTNSD 60

Query: 61  STSQSLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLF 120
           ST++ + LQPLADSV ENFTETLDNSMNLQ+P       TR ES +RIFIQDPPWIASLF
Sbjct: 61  STAEPVRLQPLADSVQENFTETLDNSMNLQVP-------TR-ESCQRIFIQDPPWIASLF 120

Query: 121 LKGLYKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAP 180
           LKGLYK VQKEVKLEF EIEKRKYNLLRRRQIKAETEAWE+MVEEYKELE+EMCEKKLAP
Sbjct: 121 LKGLYKSVQKEVKLEFKEIEKRKYNLLRRRQIKAETEAWERMVEEYKELEREMCEKKLAP 180

Query: 181 NLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLL 240
           NLPYVK LFLGWFEPLK AIE+EQ TQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLL
Sbjct: 181 NLPYVKTLFLGWFEPLKQAIEKEQNTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLL 240

Query: 241 MMAAQDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQ 300
           M+A QDGCVQVVQAAVQIGGAIEQEVRIQS LEKARSNQRTK+ AD +CL+KEKE+LRK+
Sbjct: 241 MVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKIPADAQCLSKEKEILRKR 300

Query: 301 VNGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD 360
           VNGLIRRR+LKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSAD PPD
Sbjct: 301 VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADCPPD 360

Query: 361 IRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKG 420
           IRPAFWH FKPV KTPGQ  VK YGV+ECDPIVLAGLDRTAKH+LIPYIPMLVPPKKWKG
Sbjct: 361 IRPAFWHRFKPVTKTPGQKIVKTYGVIECDPIVLAGLDRTAKHVLIPYIPMLVPPKKWKG 420

Query: 421 YDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVE 480
           YDKGGH FLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNR VLSVVE
Sbjct: 421 YDKGGHLFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVE 480

Query: 481 SLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLS 540
           S+WAQGGNTAGLVDRKDVPIPE+PLGDLTEMQEW+WS++KAKKINQELHSQRCDVELKLS
Sbjct: 481 SIWAQGGNTAGLVDRKDVPIPEQPLGDLTEMQEWKWSVRKAKKINQELHSQRCDVELKLS 540

Query: 541 VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKI 600
           VARKM+DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKI
Sbjct: 541 VARKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKI 600

Query: 601 HLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLS 660
           HLANLYAGGVEKLSYD RLAFVDDHLD+IFDSASNPVNG+RWWLTAEDPFQCLAAC+NLS
Sbjct: 601 HLANLYAGGVEKLSYDRRLAFVDDHLDSIFDSASNPVNGNRWWLTAEDPFQCLAACINLS 660

Query: 661 EALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAAR 720
           EALKSS+PHTVIS+LPIHQDGSCNGLQHYAALGRDT EAAAVNLVAGEKPADVY+EIAAR
Sbjct: 661 EALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDTFEAAAVNLVAGEKPADVYTEIAAR 720

Query: 721 VHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEE 780
           VH IMIRD +KDP TNPNA LAK+LIDQVDRKLVKQTVMTSVYGVTY+GAREQIK+RLEE
Sbjct: 721 VHNIMIRDGNKDPATNPNALLAKILIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEE 780

Query: 781 KGLISDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLG 840
           KGLISDDRL FRA+CYAAKVTL+ALGEIFEAARGIM WLGDCAKVIA DNQPVRWTTPLG
Sbjct: 781 KGLISDDRLLFRAACYAAKVTLAALGEIFEAARGIMSWLGDCAKVIAADNQPVRWTTPLG 840

Query: 841 LPVVQPYYKSERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALAC 900
           LPVVQPYYKSERHLIRTSLQVLAL+REGNSVDVRK RTAFPPNFVHSLDGSHMMLTALAC
Sbjct: 841 LPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKHRTAFPPNFVHSLDGSHMMLTALAC 900

Query: 901 RDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSL 960
           RDAGLRFAGVHDSFWTHACDVD+MN+ILRE FVELY+MPVLESLLEGFETTYPGLTFPSL
Sbjct: 901 RDAGLRFAGVHDSFWTHACDVDQMNVILRETFVELYNMPVLESLLEGFETTYPGLTFPSL 960

Query: 961 PGRGDFDLQEVLKSPYFFN 976
           P RGDFDL+EVL SPYFFN
Sbjct: 961 PDRGDFDLREVLNSPYFFN 971

[Close]

BLAST of CSPI02G05320 vs. ExPASy TrEMBL
Match: A0A6J1FCP8 (DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111444196 PE=3 SV=1)

HSP 1 Score: 1740.3 bits (4506), Expect = 0.0e+00
Identity = 870/980 (88.78%), Postives = 920/980 (93.88%), Query Frame = 0


Query: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHPSFTSTF----NSPLSSVSFPVNFD 60
           M +TASFFPT QA IHG NAW++PTKR KC+RKTH SFTS+F    NSP+SSVSFP+NFD
Sbjct: 1   MQSTASFFPTHQALIHGGNAWREPTKRCKCQRKTHLSFTSSFNSLSNSPISSVSFPINFD 60

Query: 61  STSQSLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLF 120
           ST++ L LQP ADSV ENFTE LDNSMNLQI +SEIHQIT GE  +RIFI+DPPWIASLF
Sbjct: 61  STAEPLRLQPPADSVQENFTEALDNSMNLQISMSEIHQITPGEPCERIFIRDPPWIASLF 120

Query: 121 LKGLYKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAP 180
           LKGLYK +QK VKLEF EIEKRKYNLLRRRQIKAETEAWEK VEEYKELE+EMCEKKLAP
Sbjct: 121 LKGLYKSLQKGVKLEFREIEKRKYNLLRRRQIKAETEAWEKTVEEYKELEREMCEKKLAP 180

Query: 181 NLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLL 240
           NLPYVK LFLGWFEPLK AIE+EQKTQRSKKQKAAFAPHIELLSA+KMAVIVMYKMMGLL
Sbjct: 181 NLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSAEKMAVIVMYKMMGLL 240

Query: 241 MMAAQDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQ 300
           M+A QDGCV VVQAAVQIG AIEQEVRIQS L KARSNQRTKV AD + L +EKE+LRK+
Sbjct: 241 MVAQQDGCVLVVQAAVQIGSAIEQEVRIQSFL-KARSNQRTKVPADAQGLNEEKELLRKR 300

Query: 301 VNGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD 360
           VN LIRRR+LKEVQKLLKKEE K WGRDTQAKLGSRLIELLIESAFIQPPV+QSADSPPD
Sbjct: 301 VNSLIRRRRLKEVQKLLKKEELKDWGRDTQAKLGSRLIELLIESAFIQPPVTQSADSPPD 360

Query: 361 IRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKG 420
           IRPAFWH FKPVAKTPG+N VK YGV+EC+PIVLAGLDRTAKHMLIPYIPML+PPKKWKG
Sbjct: 361 IRPAFWHKFKPVAKTPGKNIVKNYGVIECNPIVLAGLDRTAKHMLIPYIPMLIPPKKWKG 420

Query: 421 YDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVE 480
           YDKGGH FLPSYVMRTHGSSRQQDA+K ISGK MQKVFEALDMLGSTKWRVNR VLSVVE
Sbjct: 421 YDKGGHLFLPSYVMRTHGSSRQQDALKKISGKPMQKVFEALDMLGSTKWRVNRRVLSVVE 480

Query: 481 SLWAQGGNTAGLVDRKDVPIPEKPL-GDLTEMQEWRWSMKKAKKINQELHSQRCDVELKL 540
           S+WAQGGNTAGLVD KDVPIPEKPL GDLTEMQEW+WSM+KAKKINQELHSQRCD+ELKL
Sbjct: 481 SIWAQGGNTAGLVDCKDVPIPEKPLGGDLTEMQEWKWSMRKAKKINQELHSQRCDIELKL 540

Query: 541 SVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLK 600
           SVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGL WLK
Sbjct: 541 SVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLK 600

Query: 601 IHLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNL 660
           IHLANLYAGGVEKLSYD RLAFVDDHLD+IFDSASNPVNGDRWWLTAEDPFQCLAAC+NL
Sbjct: 601 IHLANLYAGGVEKLSYDRRLAFVDDHLDSIFDSASNPVNGDRWWLTAEDPFQCLAACINL 660

Query: 661 SEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAA 720
            EALKSS+PHTVIS+LPIHQDGSCNGLQHYAALGRDTLEAAAVNLV+GE+ ADVYSEIAA
Sbjct: 661 FEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVSGEEFADVYSEIAA 720

Query: 721 RVHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLE 780
           RVH IMIRD +KDPTTNPNA LAK+LIDQVDRKLVKQTVMTSVYGVTY+GAREQIKRRLE
Sbjct: 721 RVHDIMIRDGNKDPTTNPNALLAKILIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLE 780

Query: 781 EKGLISDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPL 840
           EKG+ISDDRL FRA+CYAAKVTL+ALGEIFEAARGIM WLGDCAKVIA DNQPVRWTTPL
Sbjct: 781 EKGIISDDRLLFRAACYAAKVTLAALGEIFEAARGIMSWLGDCAKVIAADNQPVRWTTPL 840

Query: 841 GLPVVQPYYKSERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALA 900
           GLPVVQPYYKSERHLIRTSLQVLAL+REGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALA
Sbjct: 841 GLPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALA 900

Query: 901 CRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPS 960
           CRDAGLRFAGVHDSFWTHACDVD+MNLILREKFVELY+MPVLE+LLE FETTYPGLTFP 
Sbjct: 901 CRDAGLRFAGVHDSFWTHACDVDQMNLILREKFVELYNMPVLETLLEDFETTYPGLTFPP 960

Query: 961 LPGRGDFDLQEVLKSPYFFN 976
           LP RG+FDL+EVLKS YFFN
Sbjct: 961 LPERGNFDLREVLKSRYFFN 979

[Close]

BLAST of CSPI02G05320 vs. NCBI nr
Match: XP_004144791.2 (DNA-directed RNA polymerase 3, chloroplastic isoform X1 [Cucumis sativus] >KGN61063.1 hypothetical protein Csa_021248 [Cucumis sativus])

HSP 1 Score: 1951.4 bits (5054), Expect = 0.0e+00
Identity = 972/975 (99.69%), Postives = 973/975 (99.79%), Query Frame = 0


Query: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHPSFTSTFNSPLSSVSFPVNFDSTSQ 60
           MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTH SFTSTFNSPLSSVSFPVNFDSTSQ
Sbjct: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHTSFTSTFNSPLSSVSFPVNFDSTSQ 60

Query: 61  SLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGL 120
           SLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGL
Sbjct: 61  SLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGL 120

Query: 121 YKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAPNLPY 180
           YKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELE+EMCEKKLAPNLPY
Sbjct: 121 YKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPY 180

Query: 181 VKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAA 240
           VKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAA
Sbjct: 181 VKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAA 240

Query: 241 QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGL 300
           QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGL
Sbjct: 241 QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGL 300

Query: 301 IRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPA 360
           IRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPA
Sbjct: 301 IRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPA 360

Query: 361 FWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKG 420
           FWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKG
Sbjct: 361 FWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKG 420

Query: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWA 480
           GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWA
Sbjct: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWA 480

Query: 481 QGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
           QGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK
Sbjct: 481 QGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540

Query: 541 MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
           MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN
Sbjct: 541 MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600

Query: 601 LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
           LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK
Sbjct: 601 LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660

Query: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
           SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI
Sbjct: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720

Query: 721 MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI 780
           MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI
Sbjct: 721 MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI 780

Query: 781 SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
           SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV
Sbjct: 781 SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840

Query: 841 QPYYKSERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
           QPYYKSERHLIRTSLQVLALQREGN VDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG
Sbjct: 841 QPYYKSERHLIRTSLQVLALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900

Query: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRG 960
           LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRG
Sbjct: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRG 960

Query: 961 DFDLQEVLKSPYFFN 976
           DFDLQEVLKSPYFFN
Sbjct: 961 DFDLQEVLKSPYFFN 975

[Close]

BLAST of CSPI02G05320 vs. NCBI nr
Match: XP_008452554.1 (PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Cucumis melo])

HSP 1 Score: 1879.8 bits (4868), Expect = 0.0e+00
Identity = 931/975 (95.49%), Postives = 953/975 (97.74%), Query Frame = 0


Query: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHPSFTSTFNSPLSSVSFPVNFDSTSQ 60
           MT TASFFPTLQAPIHGSNAWKKPTKRWKCERKT  SFTSTFNS LSSVSFP+NFDSTSQ
Sbjct: 1   MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ 60

Query: 61  SLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGL 120
             HLQPLADSVHENFTETLDNSMNLQIP SEIHQITR ES +RIFIQDPPWIASLFLKGL
Sbjct: 61  PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITREESGQRIFIQDPPWIASLFLKGL 120

Query: 121 YKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAPNLPY 180
           YKCVQKEVKLEFM+IEKRKYNLLRRRQIKAETEAWEKMV+EYKELE+EMCEKKLAPNLPY
Sbjct: 121 YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY 180

Query: 181 VKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAA 240
           VK LFLGWFEPLK AIE+EQKTQRSKKQKAAFAPHIELLSADK+AVIVMYKMMGLLM+A 
Sbjct: 181 VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ 240

Query: 241 QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGL 300
           QD CVQVVQAAVQIGGAIEQEVRIQS LEKARSNQRTKV ADTECL+KEKEVLRK+VNG 
Sbjct: 241 QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGF 300

Query: 301 IRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPA 360
           IRRR+LKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD+RPA
Sbjct: 301 IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA 360

Query: 361 FWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKG 420
           FWHGFKPVAKTPGQNFVKKYGV+ECDPIVLAGLD+TAKHMLIPYIPMLVPPKKWKGYDKG
Sbjct: 361 FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG 420

Query: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWA 480
           GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNR VLSVVESLWA
Sbjct: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA 480

Query: 481 QGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
           QGGNTAGLVDRKDVPIPEK LGDLTE QEWRWSMKKAKKINQELHSQRCDVELKLSVARK
Sbjct: 481 QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540

Query: 541 MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
           MKDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN
Sbjct: 541 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600

Query: 601 LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
           LYAGGVEKLSYD RLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK
Sbjct: 601 LYAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660

Query: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
           SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI
Sbjct: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720

Query: 721 MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI 780
           MIRDA+KDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTY+GAREQIK+RLEEKGLI
Sbjct: 721 MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI 780

Query: 781 SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
           SDDRL FRASCYAAKVTL+ALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV
Sbjct: 781 SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840

Query: 841 QPYYKSERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
           QPYYKSERHLIRTSLQVLAL+REGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG
Sbjct: 841 QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900

Query: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRG 960
           LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLP RG
Sbjct: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG 960

Query: 961 DFDLQEVLKSPYFFN 976
           DF+LQEVL+SPYFFN
Sbjct: 961 DFNLQEVLRSPYFFN 975

[Close]

BLAST of CSPI02G05320 vs. NCBI nr
Match: KAA0056119.1 (DNA-directed RNA polymerase 3 [Cucumis melo var. makuwa] >TYJ96398.1 DNA-directed RNA polymerase 3 [Cucumis melo var. makuwa])

HSP 1 Score: 1866.3 bits (4833), Expect = 0.0e+00
Identity = 926/968 (95.66%), Postives = 947/968 (97.83%), Query Frame = 0


Query: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHPSFTSTFNSPLSSVSFPVNFDSTSQ 60
           MT TASFFPTLQAPIHGSNAWKKPTKRWKCERKT  SFTSTFNS LSSVSFP+NFDSTSQ
Sbjct: 1   MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ 60

Query: 61  SLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGL 120
             HLQPLADSVHENFTETLDNSMNLQIP SEIHQITRGES +RIFIQDPPWIASLFLKGL
Sbjct: 61  PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLFLKGL 120

Query: 121 YKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAPNLPY 180
           YKCVQKEVKLEFM+IEKRKYNLLRRRQIKAETEAWEKMV+EYKELE+EMCEKKLAPNLPY
Sbjct: 121 YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY 180

Query: 181 VKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAA 240
           VK LFLGWFEPLK AIE+EQKTQRSKKQKAAFAPHIELLSADK+AVIVMYKMMGLLM+A 
Sbjct: 181 VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ 240

Query: 241 QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGL 300
           QD CVQVVQAAVQIGGAIEQEVRIQS LEKARSNQRTKV ADTECL+KEKEVLRK+VNGL
Sbjct: 241 QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGL 300

Query: 301 IRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPA 360
           IRRR+LKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD+RPA
Sbjct: 301 IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA 360

Query: 361 FWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKG 420
           FWHGFKPVAKTPGQNFVKKYGV+ECDPIVLAGLD+TAKHMLIPYIPMLVPPKKWKGYDKG
Sbjct: 361 FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG 420

Query: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWA 480
           GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNR VLSVVESLWA
Sbjct: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA 480

Query: 481 QGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
           QGGNTAGLVDRKDVPIPEK LGDLTE QEWRWSMKKAKKINQELHSQRCDVELKLSVARK
Sbjct: 481 QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540

Query: 541 MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
           MKDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN
Sbjct: 541 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600

Query: 601 LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
           L+AGGVEKLSYD RLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK
Sbjct: 601 LHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660

Query: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
           SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI
Sbjct: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720

Query: 721 MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI 780
           MIRDA+KDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTY+GAREQIK+RLEEKGLI
Sbjct: 721 MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI 780

Query: 781 SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
           SDDRL FRASCYAAKVTL+ALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV
Sbjct: 781 SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840

Query: 841 QPYYKSERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
           QPYYKSERHLIRTSLQVLAL+REGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG
Sbjct: 841 QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900

Query: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRG 960
           LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLP RG
Sbjct: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG 960

Query: 961 DFDLQEVL 969
           DFDLQE L
Sbjct: 961 DFDLQENL 968

[Close]

BLAST of CSPI02G05320 vs. NCBI nr
Match: XP_038889744.1 (DNA-directed RNA polymerase 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 1839.3 bits (4763), Expect = 0.0e+00
Identity = 911/979 (93.05%), Postives = 947/979 (96.73%), Query Frame = 0


Query: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHPSFTSTF----NSPLSSVSFPVNFD 60
           MT  ASFFPTLQAPIHG NAWKKPTKR KCERKTH SF STF    NSPLSSVSFP+NFD
Sbjct: 1   MTTAASFFPTLQAPIHGGNAWKKPTKRCKCERKTHLSFISTFNSLSNSPLSSVSFPINFD 60

Query: 61  STSQSLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLF 120
           STS+ + LQPLADSV ENFTETLD SMNLQIP+SE+ QITRGESS+RIFIQDPPWIASLF
Sbjct: 61  STSEPVQLQPLADSVQENFTETLDGSMNLQIPMSEVRQITRGESSQRIFIQDPPWIASLF 120

Query: 121 LKGLYKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAP 180
           LKGLYK VQKEVKLE+MEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELE+EMCEKKLAP
Sbjct: 121 LKGLYKSVQKEVKLEYMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAP 180

Query: 181 NLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLL 240
           NLPYVK LFLGWFEPLK AIE+EQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLL
Sbjct: 181 NLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLL 240

Query: 241 MMAAQDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQ 300
           M+A QDGCVQVVQAAVQIGGAIEQEVRIQS L+KARSNQRTKV ADTECL+KEKEVLRK+
Sbjct: 241 MVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLDKARSNQRTKVPADTECLSKEKEVLRKR 300

Query: 301 VNGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD 360
           VNGLIRRR+LKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD
Sbjct: 301 VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD 360

Query: 361 IRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKG 420
           IRPAFWH FKPVAKTPGQN VK YGV+ECDPIVLAGLDRTAKHMLIPYIPMLVPP+KWKG
Sbjct: 361 IRPAFWHRFKPVAKTPGQNIVKNYGVIECDPIVLAGLDRTAKHMLIPYIPMLVPPRKWKG 420

Query: 421 YDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVE 480
           YDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNR VLSVVE
Sbjct: 421 YDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVE 480

Query: 481 SLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLS 540
           S+WAQGGNTAGLVDRKDVPIPEKPLGDLT+MQEW+WSM+KAKKINQELHSQRCDVELKLS
Sbjct: 481 SIWAQGGNTAGLVDRKDVPIPEKPLGDLTDMQEWKWSMRKAKKINQELHSQRCDVELKLS 540

Query: 541 VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKI 600
           VAR+MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGL WLKI
Sbjct: 541 VARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKI 600

Query: 601 HLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLS 660
           HLANLYAGGVEKLSYD R+AFVDDHLD+IFDSASNPVNGDRWWLTAEDPFQCLAAC+NLS
Sbjct: 601 HLANLYAGGVEKLSYDRRVAFVDDHLDSIFDSASNPVNGDRWWLTAEDPFQCLAACINLS 660

Query: 661 EALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAAR 720
           EALKSS+PHTVIS+LPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAAR
Sbjct: 661 EALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAAR 720

Query: 721 VHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEE 780
           VHTIMIRD +KDPTTNPNA LAK+LIDQVDRKLVKQTVMTSVYGVTY+GAREQIKRRLEE
Sbjct: 721 VHTIMIRDGNKDPTTNPNALLAKILIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEE 780

Query: 781 KGLISDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLG 840
           KG+ISDDRL FRA+CYAAKVTL+ALGEIFEAARGIMGWLGDCAKVIA DNQPVRWTTPLG
Sbjct: 781 KGVISDDRLLFRAACYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAADNQPVRWTTPLG 840

Query: 841 LPVVQPYYKSERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALAC 900
           LPVVQPYYKSERHLIRTSLQVLAL+REGNSVDVRKQRTAFPPNFVHSLDGSHMMLTA+AC
Sbjct: 841 LPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTAVAC 900

Query: 901 RDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSL 960
           RDAGLRFAGVHDSFWTHACDVD+MNLILREKFVELY+MPVLESLLEGFETTYPGLTFPSL
Sbjct: 901 RDAGLRFAGVHDSFWTHACDVDQMNLILREKFVELYNMPVLESLLEGFETTYPGLTFPSL 960

Query: 961 PGRGDFDLQEVLKSPYFFN 976
           P RGDFDLQEVLKSPYFFN
Sbjct: 961 PERGDFDLQEVLKSPYFFN 979

[Close]

BLAST of CSPI02G05320 vs. NCBI nr
Match: XP_031736913.1 (DNA-directed RNA polymerase 3, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 1800.0 bits (4661), Expect = 0.0e+00
Identity = 901/904 (99.67%), Postives = 902/904 (99.78%), Query Frame = 0


Query: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHPSFTSTFNSPLSSVSFPVNFDSTSQ 60
           MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTH SFTSTFNSPLSSVSFPVNFDSTSQ
Sbjct: 1   MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHTSFTSTFNSPLSSVSFPVNFDSTSQ 60

Query: 61  SLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGL 120
           SLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGL
Sbjct: 61  SLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGL 120

Query: 121 YKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAPNLPY 180
           YKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELE+EMCEKKLAPNLPY
Sbjct: 121 YKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPY 180

Query: 181 VKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAA 240
           VKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAA
Sbjct: 181 VKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAA 240

Query: 241 QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGL 300
           QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGL
Sbjct: 241 QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGL 300

Query: 301 IRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPA 360
           IRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPA
Sbjct: 301 IRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPA 360

Query: 361 FWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKG 420
           FWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKG
Sbjct: 361 FWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKG 420

Query: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWA 480
           GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWA
Sbjct: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWA 480

Query: 481 QGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
           QGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK
Sbjct: 481 QGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540

Query: 541 MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
           MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN
Sbjct: 541 MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600

Query: 601 LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
           LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK
Sbjct: 601 LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660

Query: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
           SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI
Sbjct: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720

Query: 721 MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI 780
           MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI
Sbjct: 721 MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI 780

Query: 781 SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
           SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV
Sbjct: 781 SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840

Query: 841 QPYYKSERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
           QPYYKSERHLIRTSLQVLALQREGN VDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG
Sbjct: 841 QPYYKSERHLIRTSLQVLALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900

Query: 901 LRFA 905
           LRFA
Sbjct: 901 LRFA 904

[Close]

BLAST of CSPI02G05320 vs. TAIR 10
Match: AT2G24120.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 1357.8 bits (3513), Expect = 0.0e+00
Identity = 673/970 (69.38%), Postives = 805/970 (82.99%), Query Frame = 0


Query: 21  WKKPTKRWKCERKTHPSFTSTFNSPLSSVSFPVNFDSTSQSLHLQPLADSV--HENFTET 80
           W KP       R+    F    + P+S+ S   +  STS S+H +P+++SV  H N  E+
Sbjct: 28  WLKPPPSSALFRRKTLPFFERHSLPISASSSSSSSSSTSLSVHEKPISNSVHFHGNLIES 87

Query: 81  LDN-------SMNLQIPISEI-HQITRGESS--KRIFIQDPPWIASLFLKGLYKCVQKEV 140
            +N       ++     I E+ + + R   S  +R+F+QDPPWI++LFLKGL K V + +
Sbjct: 88  FENQDSSYAGTIKGASLIEELENPVERNGLSGRRRLFMQDPPWISALFLKGLSKMVDQTL 147

Query: 141 KLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAPNLPYVKKLFLGW 200
           K+E  +I+KRK++ LRRRQ+K ETEAWE+MV+EY++LEKEMCEK LAPNLPYVK +FLGW
Sbjct: 148 KIERKDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGW 207

Query: 201 FEPLKNAIEEEQKTQ--RSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAAQDGCVQ 260
           F+PLK+ IE EQK Q  +SKK +AA+APHIELL ADKMAVIVM+KMMGL+M   +DGC+Q
Sbjct: 208 FQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCIQ 267

Query: 261 VVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGLIRRRKL 320
           VVQAAV IG AIEQEVRI + L++ R N       D++   KEK++LRK+VN LIRR+++
Sbjct: 268 VVQAAVSIGIAIEQEVRIHNFLKRTRKNN----AGDSQEELKEKQLLRKRVNSLIRRKRI 327

Query: 321 KEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHGFK 380
            +  K++K E  K WGR TQAKLGSRL+ELLIE+A++QPP++QS DS P+ RPAF H FK
Sbjct: 328 IDALKVVKSEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHRFK 387

Query: 381 PVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLP 440
            V K PG   V++YGV+ECD ++LAGLD++AKHMLIPY+PMLVPPK+WKGYDKGG+ FLP
Sbjct: 388 TVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLFLP 447

Query: 441 SYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQGGNTA 500
           SY+MRTHGS +QQDA+K+IS K   +VFEALD LG+TKWRVNR++L VVE LWA GGN A
Sbjct: 448 SYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGNIA 507

Query: 501 GLVDRKDVPIPEKPLG-DLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEE 560
           GLV+R+DVPIPEKP   D  E+Q W+WS +KA KIN+E HS RCDVELKLSVARKMKDEE
Sbjct: 508 GLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKDEE 567

Query: 561 GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGG 620
           GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFAEGRPLGKSGLHWLKIHLANLYAGG
Sbjct: 568 GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGG 627

Query: 621 VEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPH 680
           VEKLS+D RLAFV++HLD+I DSA NP++G RWWL AEDPFQCLAAC+ L++ALKS +P+
Sbjct: 628 VEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPY 687

Query: 681 TVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDA 740
           +VIS+LPIHQDGSCNGLQHYAALGRD+ EAAAVNLVAGEKPADVYSEI+ RVH IM +D+
Sbjct: 688 SVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDS 747

Query: 741 SKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRL 800
           SKDP +NP A+LAK+LI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLEEKG+I+D+R+
Sbjct: 748 SKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERM 807

Query: 801 RFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYK 860
            F A+CY+AKVTL+ALGEIFEAAR IM WLGDCAK+IA DN PVRW TPLGLPVVQPY +
Sbjct: 808 LFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCR 867

Query: 861 SERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAG 920
           SERHLIRTSLQVLALQREGN+VDVRKQRTAFPPNFVHSLDG+HMM+TA+ACR+AGL FAG
Sbjct: 868 SERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAG 927

Query: 921 VHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQ 976
           VHDS+WTHACDVD MN ILREKFVELY+ P+LE LL+ F+ +YP L FP +P RGDFDL+
Sbjct: 928 VHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGDFDLK 987

[Close]

BLAST of CSPI02G05320 vs. TAIR 10
Match: AT2G24120.2 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 1171.0 bits (3028), Expect = 0.0e+00
Identity = 589/862 (68.33%), Postives = 709/862 (82.25%), Query Frame = 0


Query: 21  WKKPTKRWKCERKTHPSFTSTFNSPLSSVSFPVNFDSTSQSLHLQPLADSV--HENFTET 80
           W KP       R+    F    + P+S+ S   +  STS S+H +P+++SV  H N  E+
Sbjct: 28  WLKPPPSSALFRRKTLPFFERHSLPISASSSSSSSSSTSLSVHEKPISNSVHFHGNLIES 87

Query: 81  LDN-------SMNLQIPISEI-HQITRGESS--KRIFIQDPPWIASLFLKGLYKCVQKEV 140
            +N       ++     I E+ + + R   S  +R+F+QDPPWI++LFLKGL K V + +
Sbjct: 88  FENQDSSYAGTIKGASLIEELENPVERNGLSGRRRLFMQDPPWISALFLKGLSKMVDQTL 147

Query: 141 KLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAPNLPYVKKLFLGW 200
           K+E  +I+KRK++ LRRRQ+K ETEAWE+MV+EY++LEKEMCEK LAPNLPYVK +FLGW
Sbjct: 148 KIERKDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGW 207

Query: 201 FEPLKNAIEEEQKTQ--RSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAAQDGCVQ 260
           F+PLK+ IE EQK Q  +SKK +AA+APHIELL ADKMAVIVM+KMMGL+M   +DGC+Q
Sbjct: 208 FQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCIQ 267

Query: 261 VVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGLIRRRKL 320
           VVQAAV IG AIEQEVRI + L++ R N       D++   KEK++LRK+VN LIRR+++
Sbjct: 268 VVQAAVSIGIAIEQEVRIHNFLKRTRKNN----AGDSQEELKEKQLLRKRVNSLIRRKRI 327

Query: 321 KEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHGFK 380
            +  K++K E  K WGR TQAKLGSRL+ELLIE+A++QPP++QS DS P+ RPAF H FK
Sbjct: 328 IDALKVVKSEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHRFK 387

Query: 381 PVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLP 440
            V K PG   V++YGV+ECD ++LAGLD++AKHMLIPY+PMLVPPK+WKGYDKGG+ FLP
Sbjct: 388 TVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLFLP 447

Query: 441 SYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQGGNTA 500
           SY+MRTHGS +QQDA+K+IS K   +VFEALD LG+TKWRVNR++L VVE LWA GGN A
Sbjct: 448 SYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGNIA 507

Query: 501 GLVDRKDVPIPEKPLG-DLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEE 560
           GLV+R+DVPIPEKP   D  E+Q W+WS +KA KIN+E HS RCDVELKLSVARKMKDEE
Sbjct: 508 GLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKDEE 567

Query: 561 GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGG 620
           GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFAEGRPLGKSGLHWLKIHLANLYAGG
Sbjct: 568 GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGG 627

Query: 621 VEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPH 680
           VEKLS+D RLAFV++HLD+I DSA NP++G RWWL AEDPFQCLAAC+ L++ALKS +P+
Sbjct: 628 VEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPY 687

Query: 681 TVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDA 740
           +VIS+LPIHQDGSCNGLQHYAALGRD+ EAAAVNLVAGEKPADVYSEI+ RVH IM +D+
Sbjct: 688 SVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDS 747

Query: 741 SKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRL 800
           SKDP +NP A+LAK+LI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLEEKG+I+D+R+
Sbjct: 748 SKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERM 807

Query: 801 RFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYK 860
            F A+CY+AKVTL+ALGEIFEAAR IM WLGDCAK+IA DN PVRW TPLGLPVVQPY +
Sbjct: 808 LFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCR 867

Query: 861 SERHLIRTSLQVLALQREGNSV 868
           SERHLIRTSLQVLALQREGN+V
Sbjct: 868 SERHLIRTSLQVLALQREGNTV 885

[Close]

BLAST of CSPI02G05320 vs. TAIR 10
Match: AT1G68990.1 (male gametophyte defective 3 )

HSP 1 Score: 1113.6 bits (2879), Expect = 0.0e+00
Identity = 538/848 (63.44%), Postives = 666/848 (78.54%), Query Frame = 0


Query: 138 RKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAPNLPYVKKLFLGWFEPLKNAIE 197
           +K+ +L++RQ+K ETE WE+   E +E+  +MCE+KLAPNLPY+K LFLGWFEP++NAI+
Sbjct: 130 QKFYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAIQ 189

Query: 198 EEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAAQD-GCVQVVQAAVQIGG 257
           ++  T + KK K  +AP +E L ADKMAVI M+KMMGLLM  A+  G V++V AA QIG 
Sbjct: 190 DDLDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQIGE 249

Query: 258 AIEQEVRIQSILEKARSNQRTKVRADTEC-------LTKEKEVLRKQVNGLIRRRKLKEV 317
           A+EQEVRI S L+K      T    +TE        + KE E  RKQV  L+ + KL++V
Sbjct: 250 AVEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQV 309

Query: 318 QKLLKK-EEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHGFKPV 377
           + L++K + FK WG++ Q K+G+RLI+LL+E+A+IQPP  Q  D PPDIRPAF   F+ V
Sbjct: 310 KALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTV 369

Query: 378 AKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSY 437
                    ++YG +ECDP+VL GLD++A+HM+IPY+PML+PP+ W GYD+G HFFLPSY
Sbjct: 370 T-LENTKTSRRYGCIECDPLVLKGLDKSARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSY 429

Query: 438 VMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQGGNTAGL 497
           VMRTHG+ +Q+  MK    +Q++ V+EALD LG+TKW++N+ VLS+V+ +WA GG   GL
Sbjct: 430 VMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWANGGRIGGL 489

Query: 498 VDRKDVPIPEKP-LGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGF 557
           VDR+DVPIPE+P   D  + + WRW  KKA K N E HSQRCD+ELKL VARKMKDEEGF
Sbjct: 490 VDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVARKMKDEEGF 549

Query: 558 YYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVE 617
           YYPHN+DFRGRAYP+HP+LNHL SDLCRG+LEF EG+PLGKSGL WLKIH+ANLYAGGV+
Sbjct: 550 YYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAGGVD 609

Query: 618 KLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTV 677
           KL+Y++R+AF + HL++IFDS+  P+ G RWWL AEDPFQCLAAC+NLSEAL+S  P   
Sbjct: 610 KLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRSPFPEAA 669

Query: 678 ISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASK 737
           IS++PIHQDGSCNGLQHYAALGRD L A AVNLV GEKPADVY+EIAARV  IM +DA +
Sbjct: 670 ISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARVLKIMQQDAEE 729

Query: 738 DPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRLRF 797
           DP T PNA+ AKL++DQVDRKLVKQTVMTSVYGVTY GAR+QIK+RL+E+G   DD L F
Sbjct: 730 DPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFEDDSLTF 789

Query: 798 RASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSE 857
            ASCYAAK+TL AL E+FEAAR I  W GDCAK+IA +N  V WTTPLGLPVVQPY K  
Sbjct: 790 HASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVVQPYRKPG 849

Query: 858 RHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAGVH 917
           RHL++T+LQVL L RE + V  R+Q TAF PNF+HSLDGSHMM+TA+AC  AGL FAGVH
Sbjct: 850 RHLVKTTLQVLTLSRETDKVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAGLSFAGVH 909

Query: 918 DSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQEV 976
           DSFWTHACDVD MN ILREKFVELY  P+LE+LLE F+ ++P ++FP LP RGDFDL++V
Sbjct: 910 DSFWTHACDVDVMNTILREKFVELYEKPILENLLESFQKSFPDISFPPLPERGDFDLRKV 969

[Close]

BLAST of CSPI02G05320 vs. TAIR 10
Match: AT1G68990.2 (male gametophyte defective 3 )

HSP 1 Score: 1106.7 bits (2861), Expect = 0.0e+00
Identity = 538/855 (62.92%), Postives = 666/855 (77.89%), Query Frame = 0


Query: 138 RKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAPNLPYVKKLFLGWFEPLKNAIE 197
           +K+ +L++RQ+K ETE WE+   E +E+  +MCE+KLAPNLPY+K LFLGWFEP++NAI+
Sbjct: 130 QKFYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAIQ 189

Query: 198 EEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAAQD-GCVQVVQAAVQIGG 257
           ++  T + KK K  +AP +E L ADKMAVI M+KMMGLLM  A+  G V++V AA QIG 
Sbjct: 190 DDLDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQIGE 249

Query: 258 AIEQEVRIQSILEKARSNQRTKVRADTEC-------LTKEKEVLRKQVNGLIRRRKLKEV 317
           A+EQEVRI S L+K      T    +TE        + KE E  RKQV  L+ + KL++V
Sbjct: 250 AVEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQV 309

Query: 318 QKLLKK-EEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHGFKPV 377
           + L++K + FK WG++ Q K+G+RLI+LL+E+A+IQPP  Q  D PPDIRPAF   F+ V
Sbjct: 310 KALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTV 369

Query: 378 AKTPGQNFVKKYGVVECDPIVLAGLDRT-------AKHMLIPYIPMLVPPKKWKGYDKGG 437
                    ++YG +ECDP+VL GLD++       A+HM+IPY+PML+PP+ W GYD+G 
Sbjct: 370 T-LENTKTSRRYGCIECDPLVLKGLDKSVSRIVDYARHMVIPYLPMLIPPQNWTGYDQGA 429

Query: 438 HFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQ 497
           HFFLPSYVMRTHG+ +Q+  MK    +Q++ V+EALD LG+TKW++N+ VLS+V+ +WA 
Sbjct: 430 HFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWAN 489

Query: 498 GGNTAGLVDRKDVPIPEKP-LGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 557
           GG   GLVDR+DVPIPE+P   D  + + WRW  KKA K N E HSQRCD+ELKL VARK
Sbjct: 490 GGRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVARK 549

Query: 558 MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 617
           MKDEEGFYYPHN+DFRGRAYP+HP+LNHL SDLCRG+LEF EG+PLGKSGL WLKIH+AN
Sbjct: 550 MKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIAN 609

Query: 618 LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 677
           LYAGGV+KL+Y++R+AF + HL++IFDS+  P+ G RWWL AEDPFQCLAAC+NLSEAL+
Sbjct: 610 LYAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALR 669

Query: 678 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 737
           S  P   IS++PIHQDGSCNGLQHYAALGRD L A AVNLV GEKPADVY+EIAARV  I
Sbjct: 670 SPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARVLKI 729

Query: 738 MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI 797
           M +DA +DP T PNA+ AKL++DQVDRKLVKQTVMTSVYGVTY GAR+QIK+RL+E+G  
Sbjct: 730 MQQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTF 789

Query: 798 SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 857
            DD L F ASCYAAK+TL AL E+FEAAR I  W GDCAK+IA +N  V WTTPLGLPVV
Sbjct: 790 EDDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVV 849

Query: 858 QPYYKSERHLIRTSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 917
           QPY K  RHL++T+LQVL L RE + V  R+Q TAF PNF+HSLDGSHMM+TA+AC  AG
Sbjct: 850 QPYRKPGRHLVKTTLQVLTLSRETDKVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAG 909

Query: 918 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRG 976
           L FAGVHDSFWTHACDVD MN ILREKFVELY  P+LE+LLE F+ ++P ++FP LP RG
Sbjct: 910 LSFAGVHDSFWTHACDVDVMNTILREKFVELYEKPILENLLESFQKSFPDISFPPLPERG 969

[Close]

BLAST of CSPI02G05320 vs. TAIR 10
Match: AT5G15700.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 1088.9 bits (2815), Expect = 0.0e+00
Identity = 533/843 (63.23%), Postives = 666/843 (79.00%), Query Frame = 0


Query: 137  KRKYNLLRRRQIKAETEAWEKMVEEYKELEKEMCEKKLAPNLPYVKKLFLGWFEPLKNAI 196
            + K+  L RRQ+K ETE WE+   EY EL  +MCE+KLAPNLPYVK LFLGWFEPL++AI
Sbjct: 171  RTKFQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAI 230

Query: 197  EEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAAQDGCVQVVQAAVQIGG 256
             ++Q+  R  K KA +A +++ L ADK++VI M+K+MG LM    +GCV+VV AA  +G 
Sbjct: 231  AKDQELYRLGKSKATYAHYLDQLPADKISVITMHKLMGHLMTGGDNGCVKVVHAACTVGD 290

Query: 257  AIEQEVRIQSILEKARSNQRTKVR--ADTECLTKEKEVLRKQVNGLIRRRKLKEVQKLLK 316
            AIEQE+RI + L+K +     +     + E   KE++ LRK+VN LI+++KL  V+K+L+
Sbjct: 291  AIEQEIRICTFLDKKKKGDDNEESGGVENETSMKEQDKLRKKVNELIKKQKLSAVRKILQ 350

Query: 317  KEEF-KAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHGFKPVAKTPG 376
              ++ K W  D +AK+GSRLIELL+ +A+IQ P  Q  +  PD+RPAF H FK VAK   
Sbjct: 351  SHDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFVHTFK-VAK-GS 410

Query: 377  QNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTH 436
             N  +KYGV+ECDP+V  GL+++ ++ ++PY+PMLVPP KW GYDKG + FL SY+M+TH
Sbjct: 411  MNSGRKYGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAYLFLTSYIMKTH 470

Query: 437  GSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQGGNTAGLVDRKD 496
            G+ +Q++A+K+    Q+Q VFEALD LGSTKWRVN+ VL+VV+ +W+ GG  A +VDR D
Sbjct: 471  GAKQQREALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCVADMVDRSD 530

Query: 497  VPIPEKP-LGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHN 556
            VP+PEKP   D   +++W+W +K AKK+N E HSQRCD ELKLSVARKMKDEE FYYPHN
Sbjct: 531  VPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPHN 590

Query: 557  LDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYD 616
            +DFRGRAYPM PHLNHL SDLCRGVLEFAEGRP+G SGL WLKIHLANLYAGGV+KLS D
Sbjct: 591  MDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANLYAGGVDKLSLD 650

Query: 617  ERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLP 676
             RLAF ++HLD+IFDSA  P+ G RWWL AEDPFQCLA C++L+EAL+S +P TV+S++P
Sbjct: 651  GRLAFTENHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRSPSPETVLSHIP 710

Query: 677  IHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDPTTN 736
            IHQDGSCNGLQHYAALGRDTL A AVNLVAGEKPADVYS IA RV  IM RDA +DP   
Sbjct: 711  IHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEVF 770

Query: 737  PNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRLRFRASCY 796
            P A  A+ L++QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRL+E+    D++  F A+CY
Sbjct: 771  PEALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEVFGAACY 830

Query: 797  AAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIR 856
            AAKVTL+A+ E+F+AAR IM W G+CAK+IA +N+ VRWTTPLGLPVVQPY++    L++
Sbjct: 831  AAKVTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQPYHQMGTKLVK 890

Query: 857  TSLQVLALQREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAGVHDSFWT 916
            TSLQ L+LQ E + V VR+QRTAFPPNF+HSLDGSHMM+TA+AC+ AG+ FAGVHDSFWT
Sbjct: 891  TSLQTLSLQHETDQVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRAGVCFAGVHDSFWT 950

Query: 917  HACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQEVLKSPY 976
            HACDVD++N+ILREKFVELYS P+LE+LLE FE ++P L FP LP RGD DL+ VL SPY
Sbjct: 951  HACDVDKLNIILREKFVELYSQPILENLLESFEQSFPHLDFPPLPERGDLDLKVVLDSPY 1010

The following BLAST results are available for this feature:

BLAST of CSPI02G05320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P69243	0.0e+00	69.15	DNA-directed RNA polymerase 3A, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RP...	[more]
P69242	0.0e+00	69.15	DNA-directed RNA polymerase 3, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=...	[more]
Q8L6J1	0.0e+00	69.05	DNA-directed RNA polymerase 3B, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RP...	[more]
O24600	0.0e+00	69.38	DNA-directed RNA polymerase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q8L6J3	0.0e+00	66.51	DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum...	[more]

BLAST of CSPI02G05320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH38	0.0e+00	99.69	DNA-directed RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_2G036610 PE=3 SV=1	[more]
A0A1S3BU26	0.0e+00	95.49	DNA-directed RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103493541 PE=3 SV=1	[more]
A0A5D3BDV2	0.0e+00	95.66	DNA-directed RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1E061	0.0e+00	90.19	DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111024704 PE=3 ...	[more]
A0A6J1FCP8	0.0e+00	88.78	DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111444196 PE=3 S...	[more]

BLAST of CSPI02G05320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144791.2	0.0e+00	99.69	DNA-directed RNA polymerase 3, chloroplastic isoform X1 [Cucumis sativus] >KGN61...	[more]
XP_008452554.1	0.0e+00	95.49	PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Cucumis melo]	[more]
KAA0056119.1	0.0e+00	95.66	DNA-directed RNA polymerase 3 [Cucumis melo var. makuwa] >TYJ96398.1 DNA-directe...	[more]
XP_038889744.1	0.0e+00	93.05	DNA-directed RNA polymerase 3, chloroplastic [Benincasa hispida]	[more]
XP_031736913.1	0.0e+00	99.67	DNA-directed RNA polymerase 3, chloroplastic isoform X2 [Cucumis sativus]	[more]

BLAST of CSPI02G05320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24120.1	0.0e+00	69.38	DNA/RNA polymerases superfamily protein	[more]
AT2G24120.2	0.0e+00	68.33	DNA/RNA polymerases superfamily protein	[more]
AT1G68990.1	0.0e+00	63.44	male gametophyte defective 3	[more]
AT1G68990.2	0.0e+00	62.92	male gametophyte defective 3	[more]
AT5G15700.1	0.0e+00	63.23	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 145..168
None	No IPR available	GENE3D	1.10.287.280		coord: 584..662 e-value: 2.6E-28 score: 99.6
None	No IPR available	GENE3D	1.10.150.20		coord: 694..882 e-value: 6.5E-63 score: 214.4
None	No IPR available	PANTHER	PTHR10102:SF14	DNA-DIRECTED RNA POLYMERASE	coord: 48..975
IPR029262	DNA-directed RNA polymerase, N-terminal	SMART	SM01311	RPOL_N_2	coord: 145..462 e-value: 9.4E-118 score: 407.2
IPR029262	DNA-directed RNA polymerase, N-terminal	PFAM	PF14700	RPOL_N	coord: 146..462 e-value: 2.1E-77 score: 260.8
IPR002092	DNA-directed RNA polymerase, phage-type	PFAM	PF00940	RNA_pol	coord: 584..975 e-value: 2.2E-154 score: 514.5
IPR002092	DNA-directed RNA polymerase, phage-type	PANTHER	PTHR10102	DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL	coord: 48..975
IPR002092	DNA-directed RNA polymerase, phage-type	PROSITE	PS00900	RNA_POL_PHAGE_1	coord: 672..683
IPR002092	DNA-directed RNA polymerase, phage-type	PROSITE	PS00489	RNA_POL_PHAGE_2	coord: 745..759
IPR024075	DNA-directed RNA polymerase, helix hairpin domain superfamily	GENE3D	1.10.287.260		coord: 463..544 e-value: 6.1E-8 score: 34.9
IPR037159	DNA-directed RNA polymerase, N-terminal domain superfamily	GENE3D	1.10.1320.10		coord: 123..460 e-value: 6.8E-75 score: 254.1
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 133..975

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G05320.1	CSPI02G05320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006390	mitochondrial transcription
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0034245	mitochondrial DNA-directed RNA polymerase complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity