CSPI02G04990 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G04990
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	40S ribosomal protein S23-1
Location	Chr2: 3536985 .. 3540094 (-)
RNA-Seq Expression	CSPI02G04990
Synteny	CSPI02G04990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTTAAAGTTTAGAAAAGCAATTTGTCAAAAGAAGGTAAAGAAGGGAAGGGAACTTCACTCTCTCTTTTGGTACTGAAACCTCAAATTCTTTAACCGGCGGCGGGCCGCGCCCAAAGCATCGGTACGCCGACGAAGACTTGTGGTCATCGCCTCAACAATTCATCTGTGTTTTTTCTCGCCCCCATTTTCTTTCGGTATAATATAGCTTCTTTCTTATCTTTCTTTTTAGTTCAATTTCTCTGCCTTCGTGATTCATTATTGTTAAAGTCTCTTAGTGATTGTTAGTAATTTCTTGCAAATCGAAAAACTGAACCCAGAAATCATAATTGGAATCCATTTATACTTTATGTAAAGTACAACATAAATCTTCTAATTTGAAGAACCCACGCTCAGAATATGAAATGTCACAGTTAAGACAAGGACTTTTGTTGGCATTGGTAATTCTGTTAGAATCTTCCTTTGTAGAATCAAGTGTTGTTTCTTGCCTTTAGAACAATCTAGCAGTGGGAATTAGAATCGAATCATCTTTAGAATCTTGATTTAGTGAAGTGAAATGATAATTGATGAGTGTAAAGTTTTTTACCCTTCATTGTCCATAGTCTTTATGTTTTGATCGTACATTGTTTTTTATCGATGGTTTCATTTCGAATTGTGGTGTATGTTCATGGTAATTTCAGGATTAGCTCGTATTTTTTACAGAAAAAAAAGCCTCAAAAGTTCATTTGGCCTCTAAAATTGTTTATACCCTAATTCTAAGGATCTCGTGATTATCATTTCTGTTGATATTACAAGGTCGTGATTAACGTTTGGAACATTGACTCAACTATTTTGGATTGGGTTTGCATTCATTTTATTGTTCCAATGACTGAATTCTGGACAAGAAACGATTGTTCTAAGCTTAGTTTATGAAATTGCCAATTTTTTATCTGGTCCAGGAAATTAGCAGATGGCACTTAGACGATTGTTAGGCTTTTCAGATGGTGAGATCATGAGATCAGATGCTAAGCCTTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTTCTGTTGAAGGAGCACTTGGGTTCTGGATTCTTTGTAGATTACATTATGGTCTGTCAAGTATTCTTCTCAGCTCATTTGGTTTGATGTGCATTATCAAGTTTCATGTCTTTCCTTTTTCCTGATCAACTTCTAGTGAACTCAGATGGCACTTTAATCGTCAATTGTTTTCTAATTGATTCTACTATATTTACTTACTCCATTTGAATAGAAACCACAATGTTCTAGAATTGTCTTTAGATGTACATGGATTCAGTTGAAGCAGTTTTTTTGGACCAATGTGAAAATCGAGGTTGGTTAGGTTAGCTACCCAAAAGAGCAGAATAGGGTCTCCAACCCCTCCACTAAATTTCGGTTTGGGTTCAAAAGAACAGTTGAGGCCCAAGAGTGAGAGTTGAGGAAAAAAAATGGAATCAAGATTAGGATTGTGAAGACTGAAAAAGAAAGGTAGTCGAATAAAGGGGAGATGAGAGATTGAGATAATTAAGCGGGGACGAGATATGAACGCCACACGAAGATGGAGAGGTTGAGATGGAGATTCTATGAATGAGACGAGAGGAGATGATAGAGAGATAGAAATAAGTTGTGTATGATTCAAGATGGAGAGAGATGGGGGAGACGTGAGAAGGAATTGAGAAGTAGACAGGAGTTTGAGATGAAGAGAAACAACATGAATGAACCCTAGAAATTCCTCAACCCAAAAACTGAACCAAATTTTCAATTCTCCAAAAATCCAACCCAATGCAAACCCAAAGAAAATTCTAACTCAATCCAATCCAAACCCAAAAATAAAAAATCTAACCCACACTACTTTGGTTTGGGTAGCCGGGTTTGCTCGAGTTCTTGTTCTTGGGTCATTTGAACACCCTATATTGTGGAGTTTTGTTAAGTATCATGACTAAGTTTACCAAGTATGAGTATCTCTGGAAGAACTTTTAAAACAGAAGTTTTTTTTTAAAAAAGTCTTTAATTACAACCGCAGAAAAAAAAGTGCTTAATTATGGAAAACATCTGTGTTTGGTTCTGCTTTCTTAATTGTACTTTTAGATTCTTTCTCATCAAGCACTTGGTTGAATGGGTCAAATGCACTTTATTAGTGTTTCTCAGGAAACATTTAAGTGTTCTGGACTTGGTTACTTTCAAACTCGTGCTAGTGATCTGTGCTTTTTATCTGTGCTAGAAGCACTCCCATACAGCATATGCATGATAGTTTGCTGACATTTCTCACCTAACCTTTCATTCATGGCTTTTTGGCTGCAGTACTAGGAAATTGAAACATTTTTTCATGTTCTTTGAAAATAGAAAACAATTGCGACTTTGTTTAAATCAAAACCAATATTTATCCACCCTTTCCATTTAAAGTGGATTGCCTGTCGTCCTAGGGGATTTTAATACTGTACTCTTAAGATGCACATACATCAAACCACTTCTTTTCGCATATAAATGCATTAACCTGTTGACTTTAAATTTCAGCGATGTCCATGCCAAAGTCCTAAACTCTTAAAAATGACATGGCACTATGTTTATATTCGTATCCATATCCATGCTTCTTTACTCGTACTTAAGCTTGTGCGATGCTGGATTGTGTTGTGTGATAGGTCCAAGAATTACAGTACGTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCGATGAGTGCAACCTCGGCTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAATAGAAAGTTGTAAGGTAATTGACATTTATAGATTAATAATCTTATTGTATCATTAAAAAGTATTATTCAGATGTTTCCTTATTAGAAGCTAACTGATGTAATTAGTTTTGGTTAGTTTATGCTCTTGTTATTGTTATGTCTTGTTGACTCTTATCAAAGCCAAGATCCATGTTTAGATTGTATGTGTGGCTTCATGCCATAAAACTAAAAAGGAGCCTTAGGTCTACCTTTGTATTTTGTTTTTCTCAATAAAAGTTAGTTTATGAGTAGAAAAAAAGCTTTTAGTCATGTAACAAAGACCAAAATTTCTAATTTTATTGAATTGGATTGGTG

mRNA sequence

AAATTTAAAGTTTAGAAAAGCAATTTGTCAAAAGAAGGTAAAGAAGGGAAGGGAACTTCACTCTCTCTTTTGGTACTGAAACCTCAAATTCTTTAACCGGCGGCGGGCCGCGCCCAAAGCATCGGTACGCCGACGAAGACTTGTGGTCATCGCCTCAACAATTCATCTGTGTTTTTTCTCGCCCCCATTTTCTTTCGGAAATTAGCAGATGGCACTTAGACGATTGTTAGGCTTTTCAGATGGTGAGATCATGAGATCAGATGCTAAGCCTTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTTCTGTTGAAGGAGCACTTGGGTTCTGGATTCTTTGTAGATTACATTATGGTCCAAGAATTACAGTACGTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCGATGAGTGCAACCTCGGCTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAATAGAAAGTTGTAAGGTAATTGACATTTATAGATTAATAATCTTATTGTATCATTAAAAAGTATTATTCAGATGTTTCCTTATTAGAAGCTAACTGATGTAATTAGTTTTGGTTAGTTTATGCTCTTGTTATTGTTATGTCTTGTTGACTCTTATCAAAGCCAAGATCCATGTTTAGATTGTATGTGTGGCTTCATGCCATAAAACTAAAAAGGAGCCTTAGGTCTACCTTTGTATTTTGTTTTTCTCAATAAAAGTTAGTTTATGAGTAGAAAAAAAGCTTTTAGTCATGTAACAAAGACCAAAATTTCTAATTTTATTGAATTGGATTGGTG

Coding sequence (CDS)

ATGGCACTTAGACGATTGTTAGGCTTTTCAGATGGTGAGATCATGAGATCAGATGCTAAGCCTTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTTCTGTTGAAGGAGCACTTGGGTTCTGGATTCTTTGTAGATTACATTATGGTCCAAGAATTACAGTACGTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCGATGAGTGCAACCTCGGCTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAATAGAAAGTTGTAA

Protein sequence

MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL*

Homology

[Close]

BLAST of CSPI02G04990 vs. ExPASy TrEMBL
Match: A0A0A0LH12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034810 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.2e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 98
          WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 97

[Close]

BLAST of CSPI02G04990 vs. ExPASy TrEMBL
Match: A0A1S3BWM4 (uncharacterized protein LOC103493937 OS=Cucumis melo OX=3656 GN=LOC103493937 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.0e-46
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFW+LCRLHYGPRITV RSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 98
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD  KL
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL 97

[Close]

BLAST of CSPI02G04990 vs. ExPASy TrEMBL
Match: A0A5D3BBN9 (40S ribosomal protein S23-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00620 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.0e-46
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFW+LCRLHYGPRITV RSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 98
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD  KL
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL 97

[Close]

BLAST of CSPI02G04990 vs. ExPASy TrEMBL
Match: A0A6J1DQC3 (uncharacterized protein LOC111023254 OS=Momordica charantia OX=3673 GN=LOC111023254 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.0e-42
Identity = 85/97 (87.63%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRR+LGFSDGE+MRSDA PC QLMKQTAGLC+V G L FWILCRLHYGPRITV RSLR
Sbjct: 1  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 98
          WAACGA SMSATSALLVRLFSPECEPQNIAAYD RK+
Sbjct: 61 WAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV 97

[Close]

BLAST of CSPI02G04990 vs. ExPASy TrEMBL
Match: A0A6J1I1J3 (uncharacterized protein LOC111468599 OS=Cucurbita maxima OX=3661 GN=LOC111468599 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.0e-42
Identity = 86/96 (89.58%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRR  GFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FWILCRLHYGPRITV RSLR
Sbjct: 1  MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK 97
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD  K
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 96

[Close]

BLAST of CSPI02G04990 vs. NCBI nr
Match: XP_004144737.1 (uncharacterized protein LOC101221073 [Cucumis sativus] >KGN61028.1 hypothetical protein Csa_021335 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 4.5e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 98
          WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 97

[Close]

BLAST of CSPI02G04990 vs. NCBI nr
Match: XP_008453135.1 (PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo] >XP_008453144.1 PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo] >XP_008453150.1 PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo] >KAA0056088.1 40S ribosomal protein S23-1 [Cucumis melo var. makuwa] >TYJ96429.1 40S ribosomal protein S23-1 [Cucumis melo var. makuwa])

HSP 1 Score: 193.0 bits (489), Expect = 1.2e-45
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFW+LCRLHYGPRITV RSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 98
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD  KL
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL 97

[Close]

BLAST of CSPI02G04990 vs. NCBI nr
Match: XP_038889141.1 (uncharacterized protein LOC120079031 [Benincasa hispida])

HSP 1 Score: 185.3 bits (469), Expect = 2.6e-43
Identity = 88/97 (90.72%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRR LGFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FWILCRLHYGPRITV RSLR
Sbjct: 1  MALRRFLGFSDGEVMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 98
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD RK+
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV 97

[Close]

BLAST of CSPI02G04990 vs. NCBI nr
Match: XP_022969628.1 (uncharacterized protein LOC111468599 [Cucurbita maxima])

HSP 1 Score: 180.3 bits (456), Expect = 8.3e-42
Identity = 86/96 (89.58%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRR  GFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FWILCRLHYGPRITV RSLR
Sbjct: 1  MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK 97
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD  K
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 96

[Close]

BLAST of CSPI02G04990 vs. NCBI nr
Match: XP_022156333.1 (uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156334.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156335.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156336.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156337.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156338.1 uncharacterized protein LOC111023254 [Momordica charantia])

HSP 1 Score: 180.3 bits (456), Expect = 8.3e-42
Identity = 85/97 (87.63%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRR+LGFSDGE+MRSDA PC QLMKQTAGLC+V G L FWILCRLHYGPRITV RSLR
Sbjct: 1  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 98
          WAACGA SMSATSALLVRLFSPECEPQNIAAYD RK+
Sbjct: 61 WAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV 97

[Close]

BLAST of CSPI02G04990 vs. TAIR 10
Match: AT1G57540.1 (unknown protein; Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 161.4 bits (407), Expect = 3.7e-40
Identity = 74/96 (77.08%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALR+ LG+S+G++MRSDAKPCS+LMKQTA + +V GALGFW+LCRLHYGPRITV RSLR
Sbjct: 1  MALRQKLGWSEGDLMRSDAKPCSRLMKQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK 97
          WA CGA S+S ++A+LVRLFSPECEPQNIAAYDN K
Sbjct: 61 WAGCGALSVSTSTAMLVRLFSPECEPQNIAAYDNIK 96

[Close]

BLAST of CSPI02G04990 vs. TAIR 10
Match: AT1G57540.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 161.4 bits (407), Expect = 3.7e-40
Identity = 74/96 (77.08%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALR+ LG+S+G++MRSDAKPCS+LMKQTA + +V GALGFW+LCRLHYGPRITV RSLR
Sbjct: 1  MALRQKLGWSEGDLMRSDAKPCSRLMKQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK 97
          WA CGA S+S ++A+LVRLFSPECEPQNIAAYDN K
Sbjct: 61 WAGCGALSVSTSTAMLVRLFSPECEPQNIAAYDNIK 96

[Close]

BLAST of CSPI02G04990 vs. TAIR 10
Match: AT1G57540.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 161.4 bits (407), Expect = 3.7e-40
Identity = 74/96 (77.08%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALR+ LG+S+G++MRSDAKPCS+LMKQTA + +V GALGFW+LCRLHYGPRITV RSLR
Sbjct: 1  MALRQKLGWSEGDLMRSDAKPCSRLMKQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK 97
          WA CGA S+S ++A+LVRLFSPECEPQNIAAYDN K
Sbjct: 61 WAGCGALSVSTSTAMLVRLFSPECEPQNIAAYDNIK 96

The following BLAST results are available for this feature:

BLAST of CSPI02G04990 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI02G04990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH12	2.2e-48	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034810 PE=4 SV=1	[more]
A0A1S3BWM4	6.0e-46	95.88	uncharacterized protein LOC103493937 OS=Cucumis melo OX=3656 GN=LOC103493937 PE=...	[more]
A0A5D3BBN9	6.0e-46	95.88	40S ribosomal protein S23-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1DQC3	4.0e-42	87.63	uncharacterized protein LOC111023254 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1I1J3	4.0e-42	89.58	uncharacterized protein LOC111468599 OS=Cucurbita maxima OX=3661 GN=LOC111468599...	[more]

BLAST of CSPI02G04990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144737.1	4.5e-48	100.00	uncharacterized protein LOC101221073 [Cucumis sativus] >KGN61028.1 hypothetical ...	[more]
XP_008453135.1	1.2e-45	95.88	PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo] >XP_008453144.1 P...	[more]
XP_038889141.1	2.6e-43	90.72	uncharacterized protein LOC120079031 [Benincasa hispida]	[more]
XP_022969628.1	8.3e-42	89.58	uncharacterized protein LOC111468599 [Cucurbita maxima]	[more]
XP_022156333.1	8.3e-42	87.63	uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156334.1 uncha...	[more]

BLAST of CSPI02G04990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G57540.1	3.7e-40	77.08	unknown protein; Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bac...	[more]
AT1G57540.2	3.7e-40	77.08	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT1G57540.3	3.7e-40	77.08	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36331	40S RIBOSOMAL PROTEIN	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G04990.1	CSPI02G04990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane