Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCTCCCAAACTTATTATTTAAACAGCTTTTTCTAAGTTTCCAAAGAAAGCCACTGCTCATACAATCTGTTCTTTTAAGAAACCAACAATGAATTGCTGTCTAAATCTTACCTCTTTCATCCCAGCTCTTCTTTTGGCAGCTTTTTCCCTAACCGTTTTCCCTTCTCATGGAATCCCCCATGAAAATCTGGTCACCATTTGCTCTAAAACCTCCAATCCGTCGCTCTGTGAGAAAATCCTTAATAATGATTCCCGTACCGTCTCGGCCAACCTCCCTAAGCTCTCACTTATATGCAGCAATCTGGCCAAGAAACAAGCAGATCAAAACCTTGATACCTTCTACAAACTAAGTAAGAATGAGAGTGATCCCGAGGAGAAGAAAAGTTTTGAGCATTGTGTGAAGTATTACCATGAAATTCAATCAAATATCCAAAAAGCTTATCAGTTTTCACAGCAGAAGATCTTCAGAGAGAATGGTCCATTGGTGGCATCAAAGAGACTTGTTCTAAAGTGTAGTCAAGCCATTAGAATCAATTCATTGTATATTGAAGTCATGAACAAACTTATGATCCTATATTGTGATATTTCAATAAGCGTAAATCAATGTGCTGCTGCTAATGGTCACCATTCAGTAAATGTTTGA
mRNA sequence
TTTCTCCCAAACTTATTATTTAAACAGCTTTTTCTAAGTTTCCAAAGAAAGCCACTGCTCATACAATCTGTTCTTTTAAGAAACCAACAATGAATTGCTGTCTAAATCTTACCTCTTTCATCCCAGCTCTTCTTTTGGCAGCTTTTTCCCTAACCGTTTTCCCTTCTCATGGAATCCCCCATGAAAATCTGGTCACCATTTGCTCTAAAACCTCCAATCCGTCGCTCTGTGAGAAAATCCTTAATAATGATTCCCGTACCGTCTCGGCCAACCTCCCTAAGCTCTCACTTATATGCAGCAATCTGGCCAAGAAACAAGCAGATCAAAACCTTGATACCTTCTACAAACTAAGTAAGAATGAGAGTGATCCCGAGGAGAAGAAAAGTTTTGAGCATTGTGTGAAGTATTACCATGAAATTCAATCAAATATCCAAAAAGCTTATCAGTTTTCACAGCAGAAGATCTTCAGAGAGAATGGTCCATTGGTGGCATCAAAGAGACTTGTTCTAAAGTGTAGTCAAGCCATTAGAATCAATTCATTGTATATTGAAGTCATGAACAAACTTATGATCCTATATTGTGATATTTCAATAAGCGTAAATCAATGTGCTGCTGCTAATGGTCACCATTCAGTAAATGTTTGA
Coding sequence (CDS)
ATGAATTGCTGTCTAAATCTTACCTCTTTCATCCCAGCTCTTCTTTTGGCAGCTTTTTCCCTAACCGTTTTCCCTTCTCATGGAATCCCCCATGAAAATCTGGTCACCATTTGCTCTAAAACCTCCAATCCGTCGCTCTGTGAGAAAATCCTTAATAATGATTCCCGTACCGTCTCGGCCAACCTCCCTAAGCTCTCACTTATATGCAGCAATCTGGCCAAGAAACAAGCAGATCAAAACCTTGATACCTTCTACAAACTAAGTAAGAATGAGAGTGATCCCGAGGAGAAGAAAAGTTTTGAGCATTGTGTGAAGTATTACCATGAAATTCAATCAAATATCCAAAAAGCTTATCAGTTTTCACAGCAGAAGATCTTCAGAGAGAATGGTCCATTGGTGGCATCAAAGAGACTTGTTCTAAAGTGTAGTCAAGCCATTAGAATCAATTCATTGTATATTGAAGTCATGAACAAACTTATGATCCTATATTGTGATATTTCAATAAGCGTAAATCAATGTGCTGCTGCTAATGGTCACCATTCAGTAAATGTTTGA
Protein sequence
MNCCLNLTSFIPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSANLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQFSQQKIFRENGPLVASKRLVLKCSQAIRINSLYIEVMNKLMILYCDISISVNQCAAANGHHSVNV*
Homology
BLAST of CSPI02G04880 vs. ExPASy Swiss-Prot
Match:
P83326 (Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2)
HSP 1 Score: 47.8 bits (112), Expect = 1.6e-04
Identity = 35/113 (30.97%), Postives = 56/113 (49.56%), Query Frame = 0
Query: 10 FIPALLLAAF--SLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSANLPKLSL 69
F+ LL+ F L+ PS + + IC KT NPSLC + L +D R+ S +L L
Sbjct: 11 FVSLLLVILFISPLSQRPSVKAENHLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQ 70
Query: 70 ICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQF 121
++A+ A Q L+ +DP+ K +E C + Y + ++ +A QF
Sbjct: 71 FSIDIAQASAKQTSKIIASLTNQATDPKLKGRYETCSENYADAIDSLGQAKQF 123
BLAST of CSPI02G04880 vs. ExPASy TrEMBL
Match:
A0A0A0LK13 (PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G034700 PE=4 SV=1)
HSP 1 Score: 357.1 bits (915), Expect = 4.5e-95
Identity = 182/184 (98.91%), Postives = 182/184 (98.91%), Query Frame = 0
Query: 1 MNCCLNLTSFIPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 60
MNCCLNLTSFIPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA
Sbjct: 1 MNCCLNLTSFIPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 60
Query: 61 NLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQF 120
NLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQF
Sbjct: 61 NLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQF 120
Query: 121 SQQKIFRENGPLVASKRLVLKCSQAIRINSLYIEVMNKLMILYCDISISVNQCAAANGHH 180
SQQKIFRENGPLVASKRLVLKCSQ IRINSLYIEVMNKLMIL CDISISVNQCAAANGHH
Sbjct: 121 SQQKIFRENGPLVASKRLVLKCSQTIRINSLYIEVMNKLMILCCDISISVNQCAAANGHH 180
Query: 181 SVNV 185
SVNV
Sbjct: 181 SVNV 184
BLAST of CSPI02G04880 vs. ExPASy TrEMBL
Match:
A0A5A7U3I1 (Pectinesterase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001900 PE=4 SV=1)
HSP 1 Score: 337.0 bits (863), Expect = 4.9e-89
Identity = 171/179 (95.53%), Postives = 176/179 (98.32%), Query Frame = 0
Query: 1 MNCCLNLTSFIPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 60
MNCCLNLTSFIPALLLA FSLT+FPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA
Sbjct: 1 MNCCLNLTSFIPALLLATFSLTIFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 60
Query: 61 NLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQF 120
+LPKLSLICSNLAKKQADQNLDTFYKLSKNESDPE KKSFEHCV+YYHEIQSNIQKAYQF
Sbjct: 61 DLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEVKKSFEHCVEYYHEIQSNIQKAYQF 120
Query: 121 SQQKIFRENGPLVASKRLVLKCSQAIRINSLYIEVMNKLMILYCDISISVNQCAAANGH 180
SQQKIFRENGPLVASKRLVL+CSQAIRINSL+IEVMNKLMIL CDISISVNQCAAANGH
Sbjct: 121 SQQKIFRENGPLVASKRLVLRCSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGH 179
BLAST of CSPI02G04880 vs. ExPASy TrEMBL
Match:
A0A6A1UMD5 (Pectinesterase inhibitor OS=Morella rubra OX=262757 GN=CJ030_MR0G004165 PE=4 SV=1)
HSP 1 Score: 128.3 bits (321), Expect = 3.4e-26
Identity = 74/168 (44.05%), Postives = 102/168 (60.71%), Query Frame = 0
Query: 8 TSFIPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSANLPKLSL 67
T + +L+ S ++PS G+ H+ L TICSKT N CE+ L +DSRT SA+LPKLSL
Sbjct: 5 TLAVSVTVLSVASFLIYPSSGVSHDILTTICSKTQNHDACERSLESDSRTRSADLPKLSL 64
Query: 68 ICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQFSQQKIFR 127
I L KQAD N TF L N +DP + SF +CV +Y E+Q+ I+ AY SQ++ ++
Sbjct: 65 ISIELTMKQADHNHRTFSDLRDNATDPRLEDSFRNCVGFYKEMQAQIRAAYHLSQKRQYQ 124
Query: 128 ENGPLVASKRLVLKCSQAIRINSLYIEVMNKLMILYCDISISVNQCAA 176
+ LV S+RL +C+ I IN L I+ + M+L S SVNQ A
Sbjct: 125 KITELVQSERLAQECASGIPINCLEIDALTTTMLLAIKTSESVNQYIA 172
BLAST of CSPI02G04880 vs. ExPASy TrEMBL
Match:
A0A061F340 (PMEI domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_026801 PE=4 SV=1)
HSP 1 Score: 120.6 bits (301), Expect = 7.1e-24
Identity = 71/173 (41.04%), Postives = 101/173 (58.38%), Query Frame = 0
Query: 7 LTSFIPAL----LLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSANL 66
+ S+ P L LL AFS+ + PS +P+E LV ICSKT NP LC IL D RT SA+L
Sbjct: 1 MASYTPRLLALTLLVAFSV-IHPSSSVPNETLVAICSKTYNPILCASILRGDPRTSSADL 60
Query: 67 PKLSLICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQFSQ 126
P+LSL+ NL +QA N F + N +DP KK F CV+ Y ++ N+ KAY S+
Sbjct: 61 PELSLVSINLTIEQAANNSQVFVEFHDNTTDPALKKGFNSCVELYQLMEDNLDKAYHRSE 120
Query: 127 QKIFRENGPLVASKRLVLKCSQAIRINSLYIEVMNKLMILYCDISISVNQCAA 176
+R LV S ++C+ A+ IN + I+ + + ++ C+ S+SVNQ A
Sbjct: 121 GGDYRNITELVQSSNQAVECASALAINLVTIDALTRAVVSKCETSVSVNQYIA 172
BLAST of CSPI02G04880 vs. ExPASy TrEMBL
Match:
A0A5E4G0J4 (PREDICTED: pectinesterase inhibitor OS=Prunus dulcis OX=3755 GN=ALMOND_2B005171 PE=4 SV=1)
HSP 1 Score: 112.8 bits (281), Expect = 1.5e-21
Identity = 63/150 (42.00%), Postives = 92/150 (61.33%), Query Frame = 0
Query: 26 SHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSANLPKLSLICSNLAKKQADQNLDTFY 85
S G+ ++ L ICSKT NP C L T SA+LP+LSLI LA KQADQNL+TF
Sbjct: 22 SFGVSYKTLTKICSKTQNPKTCMTNLQTVPCTTSADLPELSLISIELAGKQADQNLETFR 81
Query: 86 KLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQFSQQKIFRENGPLVASKRLVLKCSQA 145
+LS N + + K+ F+ CV++Y E++ IQ A+ SQ++ + N L+ + L+CS
Sbjct: 82 ELSHNATAAKMKEEFDTCVRFYKEVRPQIQAAHLLSQKRQYENNSALLQANEFALRCSLG 141
Query: 146 IRINSLYIEVMNKLMILYCDISISVNQCAA 176
I ++SL I + + ++L D SISVN+ A
Sbjct: 142 ISVDSLEINQLQESVLLKLDTSISVNRYIA 171
BLAST of CSPI02G04880 vs. NCBI nr
Match:
KAE8651630.1 (hypothetical protein Csa_021165 [Cucumis sativus])
HSP 1 Score: 358.6 bits (919), Expect = 3.2e-95
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0
Query: 1 MNCCLNLTSFIPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 60
MNCCLNLTSFIPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA
Sbjct: 490 MNCCLNLTSFIPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 549
Query: 61 NLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQF 120
NLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQF
Sbjct: 550 NLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQF 609
Query: 121 SQQKIFRENGPLVASKRLVLKCSQAIRINSLYIEVMNKLMILYCDISISVNQCAAANGHH 180
SQQKIFRENGPLVASKRLVLKCSQAIRINSLYIEVMNKLMIL CDISISVNQCAAANGHH
Sbjct: 610 SQQKIFRENGPLVASKRLVLKCSQAIRINSLYIEVMNKLMILCCDISISVNQCAAANGHH 669
Query: 181 SVNV 185
SVNV
Sbjct: 670 SVNV 673
BLAST of CSPI02G04880 vs. NCBI nr
Match:
KAA0048111.1 (pectinesterase inhibitor [Cucumis melo var. makuwa])
HSP 1 Score: 337.0 bits (863), Expect = 1.0e-88
Identity = 171/179 (95.53%), Postives = 176/179 (98.32%), Query Frame = 0
Query: 1 MNCCLNLTSFIPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 60
MNCCLNLTSFIPALLLA FSLT+FPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA
Sbjct: 1 MNCCLNLTSFIPALLLATFSLTIFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 60
Query: 61 NLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQF 120
+LPKLSLICSNLAKKQADQNLDTFYKLSKNESDPE KKSFEHCV+YYHEIQSNIQKAYQF
Sbjct: 61 DLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEVKKSFEHCVEYYHEIQSNIQKAYQF 120
Query: 121 SQQKIFRENGPLVASKRLVLKCSQAIRINSLYIEVMNKLMILYCDISISVNQCAAANGH 180
SQQKIFRENGPLVASKRLVL+CSQAIRINSL+IEVMNKLMIL CDISISVNQCAAANGH
Sbjct: 121 SQQKIFRENGPLVASKRLVLRCSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGH 179
BLAST of CSPI02G04880 vs. NCBI nr
Match:
KAG6599172.1 (hypothetical protein SDJN03_08950, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030110.1 hypothetical protein SDJN02_08457, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 226.1 bits (575), Expect = 2.5e-55
Identity = 118/169 (69.82%), Postives = 137/169 (81.07%), Query Frame = 0
Query: 11 IPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSANLPKLSLICS 70
IP LLLA F L +FPSHGI H NL TIC KT +P C++IL N T+SA+LPKLSLI
Sbjct: 7 IPVLLLAVFYLAIFPSHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPKLSLISI 66
Query: 71 NLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQFSQQKIFRENG 130
NL K QADQNLD+F KLSKNESDPE KKSF+HCVKYYHEIQ++IQKA++ S++KIFR+N
Sbjct: 67 NLTKNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKKIFRDNH 126
Query: 131 PLVASKRLVLKCSQAIRINSLYIEVMNKLMILYCDISISVNQCAAANGH 180
PLV SK+LV +C+QAIRINSL IEVMNK MIL CDIS+SVN A AN H
Sbjct: 127 PLVTSKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHYATANAH 175
BLAST of CSPI02G04880 vs. NCBI nr
Match:
KAB1201343.1 (Pectinesterase inhibitor [Morella rubra] >KAB1224060.1 Pectinesterase inhibitor [Morella rubra])
HSP 1 Score: 128.3 bits (321), Expect = 7.1e-26
Identity = 74/168 (44.05%), Postives = 102/168 (60.71%), Query Frame = 0
Query: 8 TSFIPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSANLPKLSL 67
T + +L+ S ++PS G+ H+ L TICSKT N CE+ L +DSRT SA+LPKLSL
Sbjct: 5 TLAVSVTVLSVASFLIYPSSGVSHDILTTICSKTQNHDACERSLESDSRTRSADLPKLSL 64
Query: 68 ICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQFSQQKIFR 127
I L KQAD N TF L N +DP + SF +CV +Y E+Q+ I+ AY SQ++ ++
Sbjct: 65 ISIELTMKQADHNHRTFSDLRDNATDPRLEDSFRNCVGFYKEMQAQIRAAYHLSQKRQYQ 124
Query: 128 ENGPLVASKRLVLKCSQAIRINSLYIEVMNKLMILYCDISISVNQCAA 176
+ LV S+RL +C+ I IN L I+ + M+L S SVNQ A
Sbjct: 125 KITELVQSERLAQECASGIPINCLEIDALTTTMLLAIKTSESVNQYIA 172
BLAST of CSPI02G04880 vs. NCBI nr
Match:
XP_007031213.2 (PREDICTED: pectinesterase inhibitor [Theobroma cacao])
HSP 1 Score: 123.2 bits (308), Expect = 2.3e-24
Identity = 73/173 (42.20%), Postives = 102/173 (58.96%), Query Frame = 0
Query: 7 LTSFIPAL----LLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSANL 66
+ S+ P L LL AFS+ + PS +P+E LV ICSKT NP LCE IL D RT SA+L
Sbjct: 1 MASYTPRLLALTLLVAFSV-IHPSSSVPNETLVAICSKTYNPILCESILRGDPRTSSADL 60
Query: 67 PKLSLICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQFSQ 126
P+LSL+ NL +QA N F + N +DP KK F CV+ Y ++ N+ KAY S+
Sbjct: 61 PELSLVSINLTIEQAANNSQVFVEFHDNTTDPALKKGFNSCVELYQLMEDNLDKAYHRSE 120
Query: 127 QKIFRENGPLVASKRLVLKCSQAIRINSLYIEVMNKLMILYCDISISVNQCAA 176
+R LV S ++C+ A+ IN + I+ + + ++ C+ SISVNQ A
Sbjct: 121 GGDYRNITELVQSSNQAVECASALAINLVTIDALTRAVVSKCETSISVNQYIA 172
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P83326 | 1.6e-04 | 30.97 | Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LK13 | 4.5e-95 | 98.91 | PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G034700 PE=4 S... | [more] |
A0A5A7U3I1 | 4.9e-89 | 95.53 | Pectinesterase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... | [more] |
A0A6A1UMD5 | 3.4e-26 | 44.05 | Pectinesterase inhibitor OS=Morella rubra OX=262757 GN=CJ030_MR0G004165 PE=4 SV=... | [more] |
A0A061F340 | 7.1e-24 | 41.04 | PMEI domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_026801 PE=4 SV=... | [more] |
A0A5E4G0J4 | 1.5e-21 | 42.00 | PREDICTED: pectinesterase inhibitor OS=Prunus dulcis OX=3755 GN=ALMOND_2B005171 ... | [more] |
Match Name | E-value | Identity | Description | |
KAE8651630.1 | 3.2e-95 | 99.46 | hypothetical protein Csa_021165 [Cucumis sativus] | [more] |
KAA0048111.1 | 1.0e-88 | 95.53 | pectinesterase inhibitor [Cucumis melo var. makuwa] | [more] |
KAG6599172.1 | 2.5e-55 | 69.82 | hypothetical protein SDJN03_08950, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAB1201343.1 | 7.1e-26 | 44.05 | Pectinesterase inhibitor [Morella rubra] >KAB1224060.1 Pectinesterase inhibitor ... | [more] |
XP_007031213.2 | 2.3e-24 | 42.20 | PREDICTED: pectinesterase inhibitor [Theobroma cacao] | [more] |
Match Name | E-value | Identity | Description | |