CSPI02G04580 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G04580
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr2: 3295898 .. 3297888 (+)
RNA-Seq Expression	CSPI02G04580
Synteny	CSPI02G04580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACAATTCCACTCCCCGCCAATTTTCATACTCTTCGTTCACTTCTTCTTCTTCTCTCCTCGATAACATGGGCAAGAACTGTATGGAGATCGAGCGGAGAATCCTACGCCTTCTTCACGGCCACAAATCTCGAACCCATCTCACTCAAATCCACGCCCACTTCCTCCGCCATGGCCTCCATCAATCCAACCAAATCCTCGCCCATTTCATCTCCGTTTGCGCCTCTTTCAACCGCATTGCCTATGCCGATCGCCTCTTTTCCCAATCTCACAACCCCAACATCTTCCTATTCAATTCAATCATCAAAGCTCACTCCCTCTCTGTTCCCTTCCATCAATCCCTTCTCCTGTTTTCCTCCATGAAGAATCACAGGATTGTTCCTGATCAGTACACTTTTGCGCCGTTGCTGAAATCCTGTGCCAATCTCTGTGAGTATAGTCTTGGTCAGTGTGTGATTTCTGAAGTTTTTCGTCGTGGGTTTTACTGTTTTGGGTCTATTCGTATTGGGGTTGTTGAGTTGTATGTTTGTTGTGAGAAGATGGAGGATGCATGGAAGATGTTTGATGAAATGTCTCACAGGGATGTGGTTGTTTGGAACTTGATGATTCGTGGATTTTGCAAGACGGGAAATGTTGATTTTGGGCTGTGTCTCTTTAGACAAATGAGTGAGCGTAGTCTTGTTTCTTGGAACACTATTATTTCCTGTTTAGCTCAAAATAGGCGTGATGTTGAAGCTTTGGAACTCTTTCAACAAATGGAAGAACATGGGTTTAAACCAGATGAGGTTACTGTGGTCACAATGTTGCCTGTATGTTCTCGTTTGGGAGCTCTTGAAGTTGGACAAAGAATCCATTCTTATGCAAGTTCTAAGGGAAATTTGGTAGGTATTACGACTGTTGGGAATTCACTCATTGATTTTTACTGTAAATGTGGTAACATAGAAAAGGCTTACAACATATTTCAGAAAATGACTTGCAAAAGCGTCGTCTCTTGGAATACAATTATTTTGGGCTTTGCTTTAAATGGGAAGGGGGAGTTTGCTATTGACCTTTTTATGGAGATGCGAAAGGAGTACTTGAAGCCAAATGATGCAACATTTGTAGCTGTGTTGACTGCTTGTGTTCATTCGGGATTGTTAGAGAAGGGTCGAGAGCTATTTTCTTCAATGGCTGAGGATTACGAAATCCAGCCAAAACTCGAACATTTTGGTTGTATGGTTGATCTTTTGGGACGTGGTGGGTGTGTGGAGGAGGCTCATAAATTGATTAAAAGCATGCCAATGCAACCAAATGCCACGTTATGGGGAGCTGTGCTTGGTGCTTGCCGAACCCATGGCAACTTGAAATTTGCAGAAATGGCAGTGAAAGAGCTCATCAGTCTTGAACCATGGAACTCTGGTAATTATGTATTGTTGTCAAATATGTTGGCAGAGGAAGGAAGATGGGAAGAAGTTGAGAATGTCAGACAGTGGATGAGAGAAAAGAGCGTCAAGAAAGCACCTGGGCAGAGTGCAAGTGGGTAACTGTTAATGTTGTGGGGGAAGTTACCTCATCACTGGGTTGTAACATACAACAGGCTTCGATTCTGGTTCAAGGCATATTGTTGAGAATATCTGTTGAAATGAAATGAAGTTCAGCACTTTCAGCCACCTCAACGTGCTCTGACGTGATTAGTAATACGTAAACTCTATTGAAACTAGTCACCGGCTGTTGAACTCGGGTGAAATCAAACTGAAGAGGATAGAATGAAGTTTGAACTGCTGTGTCGTGCTGAGTACAAAACTTTACCTTCAAGATCCATTGGATTGTTTCTCTGTAGTCTAAAAGAAGATTGATCACAGAGGCTCAAGAGTCGAGAAGAATAAGGAAGAAGTGAATGGGAACGAACATGATATTACATGTAAAGAACAAAGTTTCCTCATCGAAACGTCAAACTTTGAGCCACAATGTAATAATTTCTACTTTTTAATAATATTCTGTTTTCTCCCGCA

mRNA sequence

CAAACAATTCCACTCCCCGCCAATTTTCATACTCTTCGTTCACTTCTTCTTCTTCTCTCCTCGATAACATGGGCAAGAACTGTATGGAGATCGAGCGGAGAATCCTACGCCTTCTTCACGGCCACAAATCTCGAACCCATCTCACTCAAATCCACGCCCACTTCCTCCGCCATGGCCTCCATCAATCCAACCAAATCCTCGCCCATTTCATCTCCGTTTGCGCCTCTTTCAACCGCATTGCCTATGCCGATCGCCTCTTTTCCCAATCTCACAACCCCAACATCTTCCTATTCAATTCAATCATCAAAGCTCACTCCCTCTCTGTTCCCTTCCATCAATCCCTTCTCCTGTTTTCCTCCATGAAGAATCACAGGATTGTTCCTGATCAGTACACTTTTGCGCCGTTGCTGAAATCCTGTGCCAATCTCTGTGAGTATAGTCTTGGTCAGTGTGTGATTTCTGAAGTTTTTCGTCGTGGGTTTTACTGTTTTGGGTCTATTCGTATTGGGGTTGTTGAGTTGTATGTTTGTTGTGAGAAGATGGAGGATGCATGGAAGATGTTTGATGAAATGTCTCACAGGGATGTGGTTGTTTGGAACTTGATGATTCGTGGATTTTGCAAGACGGGAAATGTTGATTTTGGGCTGTGTCTCTTTAGACAAATGAGTGAGCGTAGTCTTGTTTCTTGGAACACTATTATTTCCTGTTTAGCTCAAAATAGGCGTGATGTTGAAGCTTTGGAACTCTTTCAACAAATGGAAGAACATGGGTTTAAACCAGATGAGGTTACTGTGGTCACAATGTTGCCTGTATGTTCTCGTTTGGGAGCTCTTGAAGTTGGACAAAGAATCCATTCTTATGCAAGTTCTAAGGGAAATTTGGTAGGTATTACGACTGTTGGGAATTCACTCATTGATTTTTACTGTAAATGTGGTAACATAGAAAAGGCTTACAACATATTTCAGAAAATGACTTGCAAAAGCGTCGTCTCTTGGAATACAATTATTTTGGGCTTTGCTTTAAATGGGAAGGGGGAGTTTGCTATTGACCTTTTTATGGAGATGCGAAAGGAGTACTTGAAGCCAAATGATGCAACATTTGTAGCTGTGTTGACTGCTTGTGTTCATTCGGGATTGTTAGAGAAGGGTCGAGAGCTATTTTCTTCAATGGCTGAGGATTACGAAATCCAGCCAAAACTCGAACATTTTGGTTGTATGGTTGATCTTTTGGGACGTGGTGGGTGTGTGGAGGAGGCTCATAAATTGATTAAAAGCATGCCAATGCAACCAAATGCCACGTTATGGGGAGCTGTGCTTGGTGCTTGCCGAACCCATGGCAACTTGAAATTTGCAGAAATGGCAGTGAAAGAGCTCATCAGTCTTGAACCATGGAACTCTGGTAATTATGTATTGTTGTCAAATATGTTGGCAGAGGAAGGAAGATGGGAAGAAGTTGAGAATGTCAGACAGTGGATGAGAGAAAAGAGCGTCAAGAAAGCACCTGGGCAGAGTGCAAGTGGGTAACTGTTAATGTTGTGGGGGAAGTTACCTCATCACTGGGTTGTAACATACAACAGGCTTCGATTCTGGTTCAAGGCATATTGTTGAGAATATCTGTTGAAATGAAATGAAGTTCAGCACTTTCAGCCACCTCAACGTGCTCTGACGTGATTAGTAATACGTAAACTCTATTGAAACTAGTCACCGGCTGTTGAACTCGGGTGAAATCAAACTGAAGAGGATAGAATGAAGTTTGAACTGCTGTGTCGTGCTGAGTACAAAACTTTACCTTCAAGATCCATTGGATTGTTTCTCTGTAGTCTAAAAGAAGATTGATCACAGAGGCTCAAGAGTCGAGAAGAATAAGGAAGAAGTGAATGGGAACGAACATGATATTACATGTAAAGAACAAAGTTTCCTCATCGAAACGTCAAACTTTGAGCCACAATGTAATAATTTCTACTTTTTAATAATATTCTGTTTTCTCCCGCA

Coding sequence (CDS)

ATGGGCAAGAACTGTATGGAGATCGAGCGGAGAATCCTACGCCTTCTTCACGGCCACAAATCTCGAACCCATCTCACTCAAATCCACGCCCACTTCCTCCGCCATGGCCTCCATCAATCCAACCAAATCCTCGCCCATTTCATCTCCGTTTGCGCCTCTTTCAACCGCATTGCCTATGCCGATCGCCTCTTTTCCCAATCTCACAACCCCAACATCTTCCTATTCAATTCAATCATCAAAGCTCACTCCCTCTCTGTTCCCTTCCATCAATCCCTTCTCCTGTTTTCCTCCATGAAGAATCACAGGATTGTTCCTGATCAGTACACTTTTGCGCCGTTGCTGAAATCCTGTGCCAATCTCTGTGAGTATAGTCTTGGTCAGTGTGTGATTTCTGAAGTTTTTCGTCGTGGGTTTTACTGTTTTGGGTCTATTCGTATTGGGGTTGTTGAGTTGTATGTTTGTTGTGAGAAGATGGAGGATGCATGGAAGATGTTTGATGAAATGTCTCACAGGGATGTGGTTGTTTGGAACTTGATGATTCGTGGATTTTGCAAGACGGGAAATGTTGATTTTGGGCTGTGTCTCTTTAGACAAATGAGTGAGCGTAGTCTTGTTTCTTGGAACACTATTATTTCCTGTTTAGCTCAAAATAGGCGTGATGTTGAAGCTTTGGAACTCTTTCAACAAATGGAAGAACATGGGTTTAAACCAGATGAGGTTACTGTGGTCACAATGTTGCCTGTATGTTCTCGTTTGGGAGCTCTTGAAGTTGGACAAAGAATCCATTCTTATGCAAGTTCTAAGGGAAATTTGGTAGGTATTACGACTGTTGGGAATTCACTCATTGATTTTTACTGTAAATGTGGTAACATAGAAAAGGCTTACAACATATTTCAGAAAATGACTTGCAAAAGCGTCGTCTCTTGGAATACAATTATTTTGGGCTTTGCTTTAAATGGGAAGGGGGAGTTTGCTATTGACCTTTTTATGGAGATGCGAAAGGAGTACTTGAAGCCAAATGATGCAACATTTGTAGCTGTGTTGACTGCTTGTGTTCATTCGGGATTGTTAGAGAAGGGTCGAGAGCTATTTTCTTCAATGGCTGAGGATTACGAAATCCAGCCAAAACTCGAACATTTTGGTTGTATGGTTGATCTTTTGGGACGTGGTGGGTGTGTGGAGGAGGCTCATAAATTGATTAAAAGCATGCCAATGCAACCAAATGCCACGTTATGGGGAGCTGTGCTTGGTGCTTGCCGAACCCATGGCAACTTGAAATTTGCAGAAATGGCAGTGAAAGAGCTCATCAGTCTTGAACCATGGAACTCTGGTAATTATGTATTGTTGTCAAATATGTTGGCAGAGGAAGGAAGATGGGAAGAAGTTGAGAATGTCAGACAGTGGATGAGAGAAAAGAGCGTCAAGAAAGCACCTGGGCAGAGTGCAAGTGGGTAA

Protein sequence

MGKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNLKFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQSASG*

Homology

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BLAST of CSPI02G04580 vs. ExPASy Swiss-Prot
Match: O80488 (Pentatricopeptide repeat-containing protein At1g09190 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E70 PE=2 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 2.0e-155
Identity = 268/477 (56.18%), Postives = 356/477 (74.63%), Query Frame = 0


Query: 6   MEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFS 65
           MEIER++LRLLHGH +RT L +IHAH LRH LH SN +LAHFIS+C S +   YA+R+FS
Sbjct: 1   MEIERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFS 60

Query: 66  QSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSL 125
              NPN+ +FN++IK +SL  P  +SL  FSSMK+  I  D+YT+APLLKSC++L +   
Sbjct: 61  HIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRF 120

Query: 126 GQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCK 185
           G+CV  E+ R GF+  G IRIGVVELY    +M DA K+FDEMS R+VVVWNLMIRGFC 
Sbjct: 121 GKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCD 180

Query: 186 TGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTM 245
           +G+V+ GL LF+QMSERS+VSWN++IS L++  RD EALELF +M + GF PDE TVVT+
Sbjct: 181 SGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTV 240

Query: 246 LPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKS 305
           LP+ + LG L+ G+ IHS A S G      TVGN+L+DFYCK G++E A  IF+KM  ++
Sbjct: 241 LPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRN 300

Query: 306 VVSWNTIILGFALNGKGEFAIDLFMEMRKE-YLKPNDATFVAVLTACVHSGLLEKGRELF 365
           VVSWNT+I G A+NGKGEF IDLF  M +E  + PN+ATF+ VL  C ++G +E+G ELF
Sbjct: 301 VVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELF 360

Query: 366 SSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGN 425
             M E ++++ + EH+G MVDL+ R G + EA K +K+MP+  NA +WG++L ACR+HG+
Sbjct: 361 GLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGD 420

Query: 426 LKFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 482
           +K AE+A  EL+ +EP NSGNYVLLSN+ AEEGRW++VE VR  M++  ++K+ GQS
Sbjct: 421 VKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQS 477

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BLAST of CSPI02G04580 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 5.7e-102
Identity = 183/476 (38.45%), Postives = 304/476 (63.87%), Query Frame = 0


Query: 7   EIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFSQ 66
           E+E   +  L   KSR    +I+A  + HGL QS+ ++   +  C     + YA RLF+Q
Sbjct: 8   EVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQ 67

Query: 67  SHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRI-VPDQYTFAPLLKSCANLCEYSL 126
             NPN+FL+NSII+A++ +  +   + ++  +      +PD++TF  + KSCA+L    L
Sbjct: 68  VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 127

Query: 127 GQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCK 186
           G+ V   + + G          ++++Y+  + + DA K+FDEM  RDV+ WN ++ G+ +
Sbjct: 128 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 187

Query: 187 TGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTM 246
            G +     LF  M ++++VSW  +IS        VEA++ F++M+  G +PDE++++++
Sbjct: 188 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 247

Query: 247 LPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKS 306
           LP C++LG+LE+G+ IH YA  +G L   T V N+LI+ Y KCG I +A  +F +M  K 
Sbjct: 248 LPSCAQLGSLELGKWIHLYAERRGFLKQ-TGVCNALIEMYSKCGVISQAIQLFGQMEGKD 307

Query: 307 VVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFS 366
           V+SW+T+I G+A +G    AI+ F EM++  +KPN  TF+ +L+AC H G+ ++G   F 
Sbjct: 308 VISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFD 367

Query: 367 SMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNL 426
            M +DY+I+PK+EH+GC++D+L R G +E A ++ K+MPM+P++ +WG++L +CRT GNL
Sbjct: 368 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNL 427

Query: 427 KFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 482
             A +A+  L+ LEP + GNYVLL+N+ A+ G+WE+V  +R+ +R +++KK PG S
Sbjct: 428 DVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 482

[Close]

BLAST of CSPI02G04580 vs. ExPASy Swiss-Prot
Match: Q9FFG8 (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H17 PE=2 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.2e-96
Identity = 178/461 (38.61%), Postives = 279/461 (60.52%), Query Frame = 0


Query: 25  LTQIHAHFLRHGLHQSNQILAHFISVCASFN--RIAYADRLFSQSHNPNIFLFNSIIKAH 84
           + QIH H LR GL QS  IL   I            YA R+       N FL+ ++I+ +
Sbjct: 65  IKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGY 124

Query: 85  SLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVFRRGFYCFG 144
           ++   F +++ ++  M+   I P  +TF+ LLK+C  + + +LG+   ++ FR   +CF 
Sbjct: 125 AIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFV 184

Query: 145 SIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCKTGNVDFGLCLFRQMSER 204
            +   ++++YV CE ++ A K+FDEM  RDV+ W  +I  + + GN++    LF  +  +
Sbjct: 185 YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTK 244

Query: 205 SLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVGQRIH 264
            +V+W  +++  AQN +  EALE F +ME+ G + DEVTV   +  C++LGA +   R  
Sbjct: 245 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV 304

Query: 265 SYASSKG-NLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSVVSWNTIILGFALNGK 324
             A   G +      +G++LID Y KCGN+E+A N+F  M  K+V +++++ILG A +G+
Sbjct: 305 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGR 364

Query: 325 GEFAIDLFMEM-RKEYLKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLEHF 384
            + A+ LF  M  +  +KPN  TFV  L AC HSGL+++GR++F SM + + +QP  +H+
Sbjct: 365 AQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHY 424

Query: 385 GCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNLKFAEMAVKELISLEP 444
            CMVDLLGR G ++EA +LIK+M ++P+  +WGA+LGACR H N + AE+A + L  LEP
Sbjct: 425 TCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEP 484

Query: 445 WNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 482
              GNY+LLSN+ A  G W  V  VR+ ++EK +KK P  S
Sbjct: 485 DIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVS 525

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BLAST of CSPI02G04580 vs. ExPASy Swiss-Prot
Match: Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 1.8e-95
Identity = 185/478 (38.70%), Postives = 288/478 (60.25%), Query Frame = 0


Query: 16  LHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFSQSHNPNIFLF 75
           +HG+  +T L Q H + +  GL++ N  +A FI  C++   + YA  +F+    PN +L 
Sbjct: 23  IHGNNLKT-LKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLH 82

Query: 76  NSIIK---------AHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLG 135
           N++I+         AHS+++  ++ L    +       PD +TF  +LK    + +   G
Sbjct: 83  NTMIRALSLLDEPNAHSIAITVYRKLWALCAK------PDTFTFPFVLKIAVRVSDVWFG 142

Query: 136 QCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCKT 195
           + +  +V   GF     +  G++++Y  C  + DA KMFDEM  +DV VWN ++ G+ K 
Sbjct: 143 RQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKV 202

Query: 196 GNVDFGLCLFRQMS--ERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVT 255
           G +D    L   M    R+ VSW  +IS  A++ R  EA+E+FQ+M     +PDEVT++ 
Sbjct: 203 GEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 262

Query: 256 MLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCK 315
           +L  C+ LG+LE+G+RI SY   +G +    ++ N++ID Y K GNI KA ++F+ +  +
Sbjct: 263 VLSACADLGSLELGERICSYVDHRG-MNRAVSLNNAVIDMYAKSGNITKALDVFECVNER 322

Query: 316 SVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELF 375
           +VV+W TII G A +G G  A+ +F  M K  ++PND TF+A+L+AC H G ++ G+ LF
Sbjct: 323 NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLF 382

Query: 376 SSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGN 435
           +SM   Y I P +EH+GCM+DLLGR G + EA ++IKSMP + NA +WG++L A   H +
Sbjct: 383 NSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHD 442

Query: 436 LKFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQSA 483
           L+  E A+ ELI LEP NSGNY+LL+N+ +  GRW+E   +R  M+   VKK  G+S+
Sbjct: 443 LELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESS 492

[Close]

BLAST of CSPI02G04580 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.0e-94
Identity = 181/464 (39.01%), Postives = 280/464 (60.34%), Query Frame = 0


Query: 25  LTQIHAHFLRHGLHQSNQILAHFISVC---ASFNRIAYADRLFSQSHNPNIFLFNSIIKA 84
           L QIHA  L+ GL Q +  +  F+S C    S + + YA  +F     P+ FL+N +I+ 
Sbjct: 30  LKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89

Query: 85  HSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVFRRGF--- 144
            S S    +SLLL+  M       + YTF  LLK+C+NL  +     + +++ + G+   
Sbjct: 90  FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149

Query: 145 -YCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCKTGNVDFGLCLFR 204
            Y   S+    +  Y      + A  +FD +   D V WN +I+G+ K G +D  L LFR
Sbjct: 150 VYAVNSL----INSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR 209

Query: 205 QMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEV 264
           +M+E++ +SW T+IS   Q   + EAL+LF +M+    +PD V++   L  C++LGALE 
Sbjct: 210 KMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 269

Query: 265 GQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSVVSWNTIILGFA 324
           G+ IHSY  +K  +   + +G  LID Y KCG +E+A  +F+ +  KSV +W  +I G+A
Sbjct: 270 GKWIHSYL-NKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 329

Query: 325 LNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKL 384
            +G G  AI  FMEM+K  +KPN  TF AVLTAC ++GL+E+G+ +F SM  DY ++P +
Sbjct: 330 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 389

Query: 385 EHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNLKFAEMAVKELIS 444
           EH+GC+VDLLGR G ++EA + I+ MP++PNA +WGA+L ACR H N++  E   + LI+
Sbjct: 390 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA 449

Query: 445 LEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 482
           ++P++ G YV  +N+ A + +W++    R+ M+E+ V K PG S
Sbjct: 450 IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCS 488

[Close]

BLAST of CSPI02G04580 vs. ExPASy TrEMBL
Match: A0A0A0LJW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033910 PE=4 SV=1)

HSP 1 Score: 993.0 bits (2566), Expect = 4.3e-286
Identity = 482/484 (99.59%), Postives = 482/484 (99.59%), Query Frame = 0


Query: 1   MGKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA 60
           M KNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA
Sbjct: 1   MSKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA 60

Query: 61  DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL 120
           DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL
Sbjct: 61  DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL 120

Query: 121 CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI 180
           CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI
Sbjct: 121 CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI 180

Query: 181 RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240
           RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV
Sbjct: 181 RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240

Query: 241 TVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQK 300
           TVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQK
Sbjct: 241 TVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQK 300

Query: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG 360
           MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG
Sbjct: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG 360

Query: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR 420
           RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR
Sbjct: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR 420

Query: 421 THGNLKFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 480
           THGNLK AEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ
Sbjct: 421 THGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 480

Query: 481 SASG 485
           SASG
Sbjct: 481 SASG 484

[Close]

BLAST of CSPI02G04580 vs. ExPASy TrEMBL
Match: A0A5A7U1F2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001240 PE=4 SV=1)

HSP 1 Score: 962.2 bits (2486), Expect = 8.1e-277
Identity = 467/484 (96.49%), Postives = 469/484 (96.90%), Query Frame = 0


Query: 1   MGKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA 60
           M KNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRI YA
Sbjct: 1   MSKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIGYA 60

Query: 61  DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL 120
           DRLFSQSHNPNIFLFNSIIKAHSLS PFHQSLLLFS MKNHRIVPDQYTFAPLLKSCANL
Sbjct: 61  DRLFSQSHNPNIFLFNSIIKAHSLSPPFHQSLLLFSLMKNHRIVPDQYTFAPLLKSCANL 120

Query: 121 CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI 180
           CEYSLGQCVISEV  RGFYCFGSIRIGVVELYVCCEKMEDAWK FDEMSHRDVVVWNLMI
Sbjct: 121 CEYSLGQCVISEVLHRGFYCFGSIRIGVVELYVCCEKMEDAWKAFDEMSHRDVVVWNLMI 180

Query: 181 RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240
           RGFCK GNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV
Sbjct: 181 RGFCKMGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240

Query: 241 TVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQK 300
           TVVTMLPVCSRLGALEVGQRIHSY SSKGNLVG T VGNSLIDFYCKCGNIE AYNIFQK
Sbjct: 241 TVVTMLPVCSRLGALEVGQRIHSYTSSKGNLVGTTMVGNSLIDFYCKCGNIESAYNIFQK 300

Query: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG 360
           MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKE +KPNDATFVAVLTACVHSGLLEKG
Sbjct: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEDVKPNDATFVAVLTACVHSGLLEKG 360

Query: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR 420
           RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAH LIKSMPMQPNATLWGA+LGACR
Sbjct: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHNLIKSMPMQPNATLWGALLGACR 420

Query: 421 THGNLKFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 480
           THGNLK AEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ
Sbjct: 421 THGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 480

Query: 481 SASG 485
           SASG
Sbjct: 481 SASG 484

[Close]

BLAST of CSPI02G04580 vs. ExPASy TrEMBL
Match: A0A1S3BXN7 (pentatricopeptide repeat-containing protein At1g09190 OS=Cucumis melo OX=3656 GN=LOC103494345 PE=4 SV=1)

HSP 1 Score: 962.2 bits (2486), Expect = 8.1e-277
Identity = 467/484 (96.49%), Postives = 469/484 (96.90%), Query Frame = 0


Query: 1   MGKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA 60
           M KNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRI YA
Sbjct: 1   MSKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIGYA 60

Query: 61  DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL 120
           DRLFSQSHNPNIFLFNSIIKAHSLS PFHQSLLLFS MKNHRIVPDQYTFAPLLKSCANL
Sbjct: 61  DRLFSQSHNPNIFLFNSIIKAHSLSPPFHQSLLLFSLMKNHRIVPDQYTFAPLLKSCANL 120

Query: 121 CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI 180
           CEYSLGQCVISEV  RGFYCFGSIRIGVVELYVCCEKMEDAWK FDEMSHRDVVVWNLMI
Sbjct: 121 CEYSLGQCVISEVLHRGFYCFGSIRIGVVELYVCCEKMEDAWKAFDEMSHRDVVVWNLMI 180

Query: 181 RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240
           RGFCK GNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV
Sbjct: 181 RGFCKMGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240

Query: 241 TVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQK 300
           TVVTMLPVCSRLGALEVGQRIHSY SSKGNLVG T VGNSLIDFYCKCGNIE AYNIFQK
Sbjct: 241 TVVTMLPVCSRLGALEVGQRIHSYTSSKGNLVGTTMVGNSLIDFYCKCGNIESAYNIFQK 300

Query: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG 360
           MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKE +KPNDATFVAVLTACVHSGLLEKG
Sbjct: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEDVKPNDATFVAVLTACVHSGLLEKG 360

Query: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR 420
           RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAH LIKSMPMQPNATLWGA+LGACR
Sbjct: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHNLIKSMPMQPNATLWGALLGACR 420

Query: 421 THGNLKFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 480
           THGNLK AEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ
Sbjct: 421 THGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 480

Query: 481 SASG 485
           SASG
Sbjct: 481 SASG 484

[Close]

BLAST of CSPI02G04580 vs. ExPASy TrEMBL
Match: A0A6J1DUP9 (pentatricopeptide repeat-containing protein At1g09190 OS=Momordica charantia OX=3673 GN=LOC111023267 PE=4 SV=1)

HSP 1 Score: 823.2 bits (2125), Expect = 5.9e-235
Identity = 399/484 (82.44%), Postives = 432/484 (89.26%), Query Frame = 0


Query: 1   MGKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA 60
           M KN  EIER+ILRLLHGHK+R HLTQ HAHFLRHGLHQSNQILAHFIS+C + +++ YA
Sbjct: 1   MNKNFREIERKILRLLHGHKTRMHLTQTHAHFLRHGLHQSNQILAHFISICGALDKMPYA 60

Query: 61  DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL 120
            R+FSQS NPNIFLFNS+IKAHSL  PF QSLLLFSSMK  RIVPD+YTFAPLLKSC+NL
Sbjct: 61  IRVFSQSQNPNIFLFNSMIKAHSLCGPFEQSLLLFSSMKKQRIVPDEYTFAPLLKSCSNL 120

Query: 121 CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI 180
           C+Y LGQCV  EV RRGF  FGSIRIGVVELYVCCE+MEDA K+FD M HRDV+VWNLMI
Sbjct: 121 CDYKLGQCVKGEVLRRGFEYFGSIRIGVVELYVCCERMEDAKKVFDAMPHRDVIVWNLMI 180

Query: 181 RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240
           RGFCKTGNVD G+ LFRQMS+RS+VSWNTIISCLAQ+ RDVEALELFQQMEE GF PDEV
Sbjct: 181 RGFCKTGNVDLGIYLFRQMSDRSIVSWNTIISCLAQSGRDVEALELFQQMEEQGFAPDEV 240

Query: 241 TVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQK 300
           TVVT+LPVCSRLGA  VGQRIH+YASSKGNLV IT VGNSL+DFYCKCGN E AYNIF K
Sbjct: 241 TVVTILPVCSRLGAPVVGQRIHAYASSKGNLVDITFVGNSLLDFYCKCGNTEGAYNIFNK 300

Query: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG 360
           MTCKSVVSWNT+ILGFALNGKGE A DLFMEM ++ +KPNDATFVA+LTACVHSGLLEKG
Sbjct: 301 MTCKSVVSWNTMILGFALNGKGELATDLFMEMGRKDVKPNDATFVALLTACVHSGLLEKG 360

Query: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR 420
           RE+FSSM   Y+I PKLEHFGCMVDLLGR G VEEAH LIKSMPMQPNATLWGA+LGACR
Sbjct: 361 REIFSSMMHKYKIVPKLEHFGCMVDLLGRSGLVEEAHNLIKSMPMQPNATLWGALLGACR 420

Query: 421 THGNLKFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 480
           THGNLK AE+AVKELISLEPWNSGNYVLLSNMLA EGRWE+VENVR WMR KSV KAPGQ
Sbjct: 421 THGNLKLAELAVKELISLEPWNSGNYVLLSNMLAAEGRWEDVENVRGWMRGKSVTKAPGQ 480

Query: 481 SASG 485
           SA+G
Sbjct: 481 SANG 484

[Close]

BLAST of CSPI02G04580 vs. ExPASy TrEMBL
Match: A0A6J1HMD5 (pentatricopeptide repeat-containing protein At1g09190 OS=Cucurbita maxima OX=3661 GN=LOC111465519 PE=4 SV=1)

HSP 1 Score: 822.0 bits (2122), Expect = 1.3e-234
Identity = 401/484 (82.85%), Postives = 434/484 (89.67%), Query Frame = 0


Query: 1   MGKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA 60
           M KN   IERRILRLL GHKS THLTQIHAHFLRH LHQSNQILAHFIS+C  FN IAYA
Sbjct: 1   MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGGFNEIAYA 60

Query: 61  DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL 120
           +R+FSQS NPNIFLFNS+IKAHSLS PF QSLLLFSS+KN RIVPD+YTFAPLLKSC+NL
Sbjct: 61  NRVFSQSQNPNIFLFNSMIKAHSLSGPFEQSLLLFSSLKNRRIVPDEYTFAPLLKSCSNL 120

Query: 121 CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI 180
            +Y LG+CVI EV RRGF CFGSIRIGVVELYVCCE+M+DA K+FDEM H DVVVWNLMI
Sbjct: 121 YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCERMDDAQKVFDEMPHTDVVVWNLMI 180

Query: 181 RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240
           RGFCK GNVD GL LFRQM++RSLVSWNT ISCLAQ+ RDVEALELFQQMEEHGF+PDEV
Sbjct: 181 RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEV 240

Query: 241 TVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQK 300
           TVVTMLPVCSRLGA++VGQ IHSYA+SK +LV  T VGNSLIDFYCK GN E+AYNIFQK
Sbjct: 241 TVVTMLPVCSRLGAIDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQK 300

Query: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG 360
           MTCKSVVSWNT+ILGFALNGKGE AIDLFMEM +   KPND T VA+LTACVHSGLLEKG
Sbjct: 301 MTCKSVVSWNTMILGFALNGKGELAIDLFMEMGQGDAKPNDVTLVAILTACVHSGLLEKG 360

Query: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR 420
           +E+FSSMAE YEI+PKLEHFGCMVDLLGRGGCVEEAH LI+SMPMQPNATLWGA+LGACR
Sbjct: 361 QEVFSSMAEKYEIEPKLEHFGCMVDLLGRGGCVEEAHSLIRSMPMQPNATLWGALLGACR 420

Query: 421 THGNLKFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 480
           THGNLK AEMAV ELISLEP NSGNYVLLSN LAEE RWE+VENVR+ MR K+VKKAPG+
Sbjct: 421 THGNLKLAEMAVNELISLEPSNSGNYVLLSNTLAEERRWEDVENVRRSMRGKNVKKAPGR 480

Query: 481 SASG 485
           SASG
Sbjct: 481 SASG 484

[Close]

BLAST of CSPI02G04580 vs. NCBI nr
Match: XP_004144815.1 (pentatricopeptide repeat-containing protein At1g09190 isoform X1 [Cucumis sativus])

HSP 1 Score: 993.0 bits (2566), Expect = 8.8e-286
Identity = 482/484 (99.59%), Postives = 482/484 (99.59%), Query Frame = 0


Query: 1   MGKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA 60
           M KNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA
Sbjct: 1   MSKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA 60

Query: 61  DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL 120
           DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL
Sbjct: 61  DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL 120

Query: 121 CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI 180
           CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI
Sbjct: 121 CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI 180

Query: 181 RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240
           RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV
Sbjct: 181 RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240

Query: 241 TVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQK 300
           TVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQK
Sbjct: 241 TVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQK 300

Query: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG 360
           MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG
Sbjct: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG 360

Query: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR 420
           RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR
Sbjct: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR 420

Query: 421 THGNLKFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 480
           THGNLK AEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ
Sbjct: 421 THGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 480

Query: 481 SASG 485
           SASG
Sbjct: 481 SASG 484

[Close]

BLAST of CSPI02G04580 vs. NCBI nr
Match: XP_008453700.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09190 [Cucumis melo] >KAA0048057.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ96479.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 962.2 bits (2486), Expect = 1.7e-276
Identity = 467/484 (96.49%), Postives = 469/484 (96.90%), Query Frame = 0


Query: 1   MGKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA 60
           M KNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRI YA
Sbjct: 1   MSKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIGYA 60

Query: 61  DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL 120
           DRLFSQSHNPNIFLFNSIIKAHSLS PFHQSLLLFS MKNHRIVPDQYTFAPLLKSCANL
Sbjct: 61  DRLFSQSHNPNIFLFNSIIKAHSLSPPFHQSLLLFSLMKNHRIVPDQYTFAPLLKSCANL 120

Query: 121 CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI 180
           CEYSLGQCVISEV  RGFYCFGSIRIGVVELYVCCEKMEDAWK FDEMSHRDVVVWNLMI
Sbjct: 121 CEYSLGQCVISEVLHRGFYCFGSIRIGVVELYVCCEKMEDAWKAFDEMSHRDVVVWNLMI 180

Query: 181 RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240
           RGFCK GNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV
Sbjct: 181 RGFCKMGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240

Query: 241 TVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQK 300
           TVVTMLPVCSRLGALEVGQRIHSY SSKGNLVG T VGNSLIDFYCKCGNIE AYNIFQK
Sbjct: 241 TVVTMLPVCSRLGALEVGQRIHSYTSSKGNLVGTTMVGNSLIDFYCKCGNIESAYNIFQK 300

Query: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG 360
           MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKE +KPNDATFVAVLTACVHSGLLEKG
Sbjct: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEDVKPNDATFVAVLTACVHSGLLEKG 360

Query: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR 420
           RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAH LIKSMPMQPNATLWGA+LGACR
Sbjct: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHNLIKSMPMQPNATLWGALLGACR 420

Query: 421 THGNLKFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 480
           THGNLK AEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ
Sbjct: 421 THGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 480

Query: 481 SASG 485
           SASG
Sbjct: 481 SASG 484

[Close]

BLAST of CSPI02G04580 vs. NCBI nr
Match: XP_031737169.1 (pentatricopeptide repeat-containing protein At1g09190 isoform X2 [Cucumis sativus])

HSP 1 Score: 919.1 bits (2374), Expect = 1.6e-263
Identity = 454/484 (93.80%), Postives = 454/484 (93.80%), Query Frame = 0


Query: 1   MGKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA 60
           M KNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA
Sbjct: 1   MSKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA 60

Query: 61  DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL 120
           DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL
Sbjct: 61  DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL 120

Query: 121 CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI 180
           CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI
Sbjct: 121 CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI 180

Query: 181 RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240
           RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV
Sbjct: 181 RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240

Query: 241 TVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQK 300
           TVVTMLPVCSRLGALEVGQRIHSYASSKGNL                            K
Sbjct: 241 TVVTMLPVCSRLGALEVGQRIHSYASSKGNL----------------------------K 300

Query: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG 360
           MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG
Sbjct: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG 360

Query: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR 420
           RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR
Sbjct: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR 420

Query: 421 THGNLKFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 480
           THGNLK AEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ
Sbjct: 421 THGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 456

Query: 481 SASG 485
           SASG
Sbjct: 481 SASG 456

[Close]

BLAST of CSPI02G04580 vs. NCBI nr
Match: XP_038890516.1 (pentatricopeptide repeat-containing protein At1g09190 [Benincasa hispida])

HSP 1 Score: 891.3 bits (2302), Expect = 3.6e-255
Identity = 427/484 (88.22%), Postives = 458/484 (94.63%), Query Frame = 0


Query: 1   MGKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA 60
           M KNC+EIERRILRLLHG KSRTHLT+IHAHFLRHGLHQSNQILAHFIS+CA+FN I+YA
Sbjct: 1   MNKNCLEIERRILRLLHGEKSRTHLTEIHAHFLRHGLHQSNQILAHFISICAAFNHISYA 60

Query: 61  DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL 120
            RLFSQSHNPNIFLFNSIIKAHSL  PF QSLLLFSSMKNHRIVPD+YTFAPLLKSCANL
Sbjct: 61  SRLFSQSHNPNIFLFNSIIKAHSLCPPFQQSLLLFSSMKNHRIVPDEYTFAPLLKSCANL 120

Query: 121 CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI 180
            EYSLGQCVI+EV RRGFYCFGSIRIGVVELYVCCE+MEDA K+FDEM HRDVVVWNLMI
Sbjct: 121 REYSLGQCVIAEVLRRGFYCFGSIRIGVVELYVCCERMEDARKVFDEMPHRDVVVWNLMI 180

Query: 181 RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240
           RGFCK GNVDFGL LFRQM+ERSL+SWNT++SCLAQ+R D EALELFQQMEE GFKPDEV
Sbjct: 181 RGFCKMGNVDFGLYLFRQMNERSLISWNTMLSCLAQSRCDAEALELFQQMEECGFKPDEV 240

Query: 241 TVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQK 300
           TVVTMLPVCSRLGAL+VGQRIH+YASSKG++V  TT+GNSL+DFYCKCGN+E+AYNIFQK
Sbjct: 241 TVVTMLPVCSRLGALDVGQRIHNYASSKGDMVDNTTIGNSLVDFYCKCGNVERAYNIFQK 300

Query: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG 360
           MTCKSVVSWNT+ILGFALNG GEFAIDLFM+M KE +KPNDATFVAVLTACVHSGLLEKG
Sbjct: 301 MTCKSVVSWNTMILGFALNGNGEFAIDLFMKMGKEDVKPNDATFVAVLTACVHSGLLEKG 360

Query: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR 420
           RELFSSMA+ YEIQPKLEHFGCMVDLLGRGGC+EEAH LIKSMPMQPNATLWGA+LGACR
Sbjct: 361 RELFSSMADKYEIQPKLEHFGCMVDLLGRGGCLEEAHNLIKSMPMQPNATLWGALLGACR 420

Query: 421 THGNLKFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 480
           THGNLK AEMAVKEL SLEPWNSGNYVLLSNMLAEEGRWE+VENVR+WM+ KSVKKAPGQ
Sbjct: 421 THGNLKLAEMAVKELSSLEPWNSGNYVLLSNMLAEEGRWEDVENVRRWMKGKSVKKAPGQ 480

Query: 481 SASG 485
           SASG
Sbjct: 481 SASG 484

[Close]

BLAST of CSPI02G04580 vs. NCBI nr
Match: XP_022156351.1 (pentatricopeptide repeat-containing protein At1g09190 [Momordica charantia])

HSP 1 Score: 823.2 bits (2125), Expect = 1.2e-234
Identity = 399/484 (82.44%), Postives = 432/484 (89.26%), Query Frame = 0


Query: 1   MGKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYA 60
           M KN  EIER+ILRLLHGHK+R HLTQ HAHFLRHGLHQSNQILAHFIS+C + +++ YA
Sbjct: 1   MNKNFREIERKILRLLHGHKTRMHLTQTHAHFLRHGLHQSNQILAHFISICGALDKMPYA 60

Query: 61  DRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANL 120
            R+FSQS NPNIFLFNS+IKAHSL  PF QSLLLFSSMK  RIVPD+YTFAPLLKSC+NL
Sbjct: 61  IRVFSQSQNPNIFLFNSMIKAHSLCGPFEQSLLLFSSMKKQRIVPDEYTFAPLLKSCSNL 120

Query: 121 CEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMI 180
           C+Y LGQCV  EV RRGF  FGSIRIGVVELYVCCE+MEDA K+FD M HRDV+VWNLMI
Sbjct: 121 CDYKLGQCVKGEVLRRGFEYFGSIRIGVVELYVCCERMEDAKKVFDAMPHRDVIVWNLMI 180

Query: 181 RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240
           RGFCKTGNVD G+ LFRQMS+RS+VSWNTIISCLAQ+ RDVEALELFQQMEE GF PDEV
Sbjct: 181 RGFCKTGNVDLGIYLFRQMSDRSIVSWNTIISCLAQSGRDVEALELFQQMEEQGFAPDEV 240

Query: 241 TVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQK 300
           TVVT+LPVCSRLGA  VGQRIH+YASSKGNLV IT VGNSL+DFYCKCGN E AYNIF K
Sbjct: 241 TVVTILPVCSRLGAPVVGQRIHAYASSKGNLVDITFVGNSLLDFYCKCGNTEGAYNIFNK 300

Query: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKG 360
           MTCKSVVSWNT+ILGFALNGKGE A DLFMEM ++ +KPNDATFVA+LTACVHSGLLEKG
Sbjct: 301 MTCKSVVSWNTMILGFALNGKGELATDLFMEMGRKDVKPNDATFVALLTACVHSGLLEKG 360

Query: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACR 420
           RE+FSSM   Y+I PKLEHFGCMVDLLGR G VEEAH LIKSMPMQPNATLWGA+LGACR
Sbjct: 361 REIFSSMMHKYKIVPKLEHFGCMVDLLGRSGLVEEAHNLIKSMPMQPNATLWGALLGACR 420

Query: 421 THGNLKFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQ 480
           THGNLK AE+AVKELISLEPWNSGNYVLLSNMLA EGRWE+VENVR WMR KSV KAPGQ
Sbjct: 421 THGNLKLAELAVKELISLEPWNSGNYVLLSNMLAAEGRWEDVENVRGWMRGKSVTKAPGQ 480

Query: 481 SASG 485
           SA+G
Sbjct: 481 SANG 484

[Close]

BLAST of CSPI02G04580 vs. TAIR 10
Match: AT1G09190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 550.4 bits (1417), Expect = 1.4e-156
Identity = 268/477 (56.18%), Postives = 356/477 (74.63%), Query Frame = 0


Query: 6   MEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFS 65
           MEIER++LRLLHGH +RT L +IHAH LRH LH SN +LAHFIS+C S +   YA+R+FS
Sbjct: 1   MEIERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFS 60

Query: 66  QSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSL 125
              NPN+ +FN++IK +SL  P  +SL  FSSMK+  I  D+YT+APLLKSC++L +   
Sbjct: 61  HIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRF 120

Query: 126 GQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCK 185
           G+CV  E+ R GF+  G IRIGVVELY    +M DA K+FDEMS R+VVVWNLMIRGFC 
Sbjct: 121 GKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCD 180

Query: 186 TGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTM 245
           +G+V+ GL LF+QMSERS+VSWN++IS L++  RD EALELF +M + GF PDE TVVT+
Sbjct: 181 SGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTV 240

Query: 246 LPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKS 305
           LP+ + LG L+ G+ IHS A S G      TVGN+L+DFYCK G++E A  IF+KM  ++
Sbjct: 241 LPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRN 300

Query: 306 VVSWNTIILGFALNGKGEFAIDLFMEMRKE-YLKPNDATFVAVLTACVHSGLLEKGRELF 365
           VVSWNT+I G A+NGKGEF IDLF  M +E  + PN+ATF+ VL  C ++G +E+G ELF
Sbjct: 301 VVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELF 360

Query: 366 SSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGN 425
             M E ++++ + EH+G MVDL+ R G + EA K +K+MP+  NA +WG++L ACR+HG+
Sbjct: 361 GLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGD 420

Query: 426 LKFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 482
           +K AE+A  EL+ +EP NSGNYVLLSN+ AEEGRW++VE VR  M++  ++K+ GQS
Sbjct: 421 VKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQS 477

[Close]

BLAST of CSPI02G04580 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 372.9 bits (956), Expect = 4.0e-103
Identity = 183/476 (38.45%), Postives = 304/476 (63.87%), Query Frame = 0


Query: 7   EIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFSQ 66
           E+E   +  L   KSR    +I+A  + HGL QS+ ++   +  C     + YA RLF+Q
Sbjct: 8   EVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQ 67

Query: 67  SHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRI-VPDQYTFAPLLKSCANLCEYSL 126
             NPN+FL+NSII+A++ +  +   + ++  +      +PD++TF  + KSCA+L    L
Sbjct: 68  VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 127

Query: 127 GQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCK 186
           G+ V   + + G          ++++Y+  + + DA K+FDEM  RDV+ WN ++ G+ +
Sbjct: 128 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 187

Query: 187 TGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTM 246
            G +     LF  M ++++VSW  +IS        VEA++ F++M+  G +PDE++++++
Sbjct: 188 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 247

Query: 247 LPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKS 306
           LP C++LG+LE+G+ IH YA  +G L   T V N+LI+ Y KCG I +A  +F +M  K 
Sbjct: 248 LPSCAQLGSLELGKWIHLYAERRGFLKQ-TGVCNALIEMYSKCGVISQAIQLFGQMEGKD 307

Query: 307 VVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFS 366
           V+SW+T+I G+A +G    AI+ F EM++  +KPN  TF+ +L+AC H G+ ++G   F 
Sbjct: 308 VISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFD 367

Query: 367 SMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNL 426
            M +DY+I+PK+EH+GC++D+L R G +E A ++ K+MPM+P++ +WG++L +CRT GNL
Sbjct: 368 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNL 427

Query: 427 KFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 482
             A +A+  L+ LEP + GNYVLL+N+ A+ G+WE+V  +R+ +R +++KK PG S
Sbjct: 428 DVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 482

[Close]

BLAST of CSPI02G04580 vs. TAIR 10
Match: AT5G44230.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 355.1 bits (910), Expect = 8.7e-98
Identity = 178/461 (38.61%), Postives = 279/461 (60.52%), Query Frame = 0


Query: 25  LTQIHAHFLRHGLHQSNQILAHFISVCASFN--RIAYADRLFSQSHNPNIFLFNSIIKAH 84
           + QIH H LR GL QS  IL   I            YA R+       N FL+ ++I+ +
Sbjct: 65  IKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGY 124

Query: 85  SLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVFRRGFYCFG 144
           ++   F +++ ++  M+   I P  +TF+ LLK+C  + + +LG+   ++ FR   +CF 
Sbjct: 125 AIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFV 184

Query: 145 SIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCKTGNVDFGLCLFRQMSER 204
            +   ++++YV CE ++ A K+FDEM  RDV+ W  +I  + + GN++    LF  +  +
Sbjct: 185 YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTK 244

Query: 205 SLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVGQRIH 264
            +V+W  +++  AQN +  EALE F +ME+ G + DEVTV   +  C++LGA +   R  
Sbjct: 245 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV 304

Query: 265 SYASSKG-NLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSVVSWNTIILGFALNGK 324
             A   G +      +G++LID Y KCGN+E+A N+F  M  K+V +++++ILG A +G+
Sbjct: 305 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGR 364

Query: 325 GEFAIDLFMEM-RKEYLKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLEHF 384
            + A+ LF  M  +  +KPN  TFV  L AC HSGL+++GR++F SM + + +QP  +H+
Sbjct: 365 AQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHY 424

Query: 385 GCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNLKFAEMAVKELISLEP 444
            CMVDLLGR G ++EA +LIK+M ++P+  +WGA+LGACR H N + AE+A + L  LEP
Sbjct: 425 TCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEP 484

Query: 445 WNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 482
              GNY+LLSN+ A  G W  V  VR+ ++EK +KK P  S
Sbjct: 485 DIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVS 525

[Close]

BLAST of CSPI02G04580 vs. TAIR 10
Match: AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 351.3 bits (900), Expect = 1.3e-96
Identity = 185/478 (38.70%), Postives = 288/478 (60.25%), Query Frame = 0


Query: 16  LHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFSQSHNPNIFLF 75
           +HG+  +T L Q H + +  GL++ N  +A FI  C++   + YA  +F+    PN +L 
Sbjct: 23  IHGNNLKT-LKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLH 82

Query: 76  NSIIK---------AHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLG 135
           N++I+         AHS+++  ++ L    +       PD +TF  +LK    + +   G
Sbjct: 83  NTMIRALSLLDEPNAHSIAITVYRKLWALCAK------PDTFTFPFVLKIAVRVSDVWFG 142

Query: 136 QCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCKT 195
           + +  +V   GF     +  G++++Y  C  + DA KMFDEM  +DV VWN ++ G+ K 
Sbjct: 143 RQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKV 202

Query: 196 GNVDFGLCLFRQMS--ERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVT 255
           G +D    L   M    R+ VSW  +IS  A++ R  EA+E+FQ+M     +PDEVT++ 
Sbjct: 203 GEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 262

Query: 256 MLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCK 315
           +L  C+ LG+LE+G+RI SY   +G +    ++ N++ID Y K GNI KA ++F+ +  +
Sbjct: 263 VLSACADLGSLELGERICSYVDHRG-MNRAVSLNNAVIDMYAKSGNITKALDVFECVNER 322

Query: 316 SVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELF 375
           +VV+W TII G A +G G  A+ +F  M K  ++PND TF+A+L+AC H G ++ G+ LF
Sbjct: 323 NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLF 382

Query: 376 SSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGN 435
           +SM   Y I P +EH+GCM+DLLGR G + EA ++IKSMP + NA +WG++L A   H +
Sbjct: 383 NSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHD 442

Query: 436 LKFAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQSA 483
           L+  E A+ ELI LEP NSGNY+LL+N+ +  GRW+E   +R  M+   VKK  G+S+
Sbjct: 443 LELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESS 492

[Close]

BLAST of CSPI02G04580 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 347.8 bits (891), Expect = 1.4e-95
Identity = 181/464 (39.01%), Postives = 280/464 (60.34%), Query Frame = 0


Query: 25  LTQIHAHFLRHGLHQSNQILAHFISVC---ASFNRIAYADRLFSQSHNPNIFLFNSIIKA 84
           L QIHA  L+ GL Q +  +  F+S C    S + + YA  +F     P+ FL+N +I+ 
Sbjct: 30  LKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89

Query: 85  HSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVFRRGF--- 144
            S S    +SLLL+  M       + YTF  LLK+C+NL  +     + +++ + G+   
Sbjct: 90  FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149

Query: 145 -YCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCKTGNVDFGLCLFR 204
            Y   S+    +  Y      + A  +FD +   D V WN +I+G+ K G +D  L LFR
Sbjct: 150 VYAVNSL----INSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR 209

Query: 205 QMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEV 264
           +M+E++ +SW T+IS   Q   + EAL+LF +M+    +PD V++   L  C++LGALE 
Sbjct: 210 KMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 269

Query: 265 GQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSVVSWNTIILGFA 324
           G+ IHSY  +K  +   + +G  LID Y KCG +E+A  +F+ +  KSV +W  +I G+A
Sbjct: 270 GKWIHSYL-NKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 329

Query: 325 LNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKL 384
            +G G  AI  FMEM+K  +KPN  TF AVLTAC ++GL+E+G+ +F SM  DY ++P +
Sbjct: 330 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 389

Query: 385 EHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNLKFAEMAVKELIS 444
           EH+GC+VDLLGR G ++EA + I+ MP++PNA +WGA+L ACR H N++  E   + LI+
Sbjct: 390 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA 449

Query: 445 LEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 482
           ++P++ G YV  +N+ A + +W++    R+ M+E+ V K PG S
Sbjct: 450 IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCS 488

The following BLAST results are available for this feature:

BLAST of CSPI02G04580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80488	2.0e-155	56.18	Pentatricopeptide repeat-containing protein At1g09190 OS=Arabidopsis thaliana OX...	[more]
Q9SIL5	5.7e-102	38.45	Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX...	[more]
Q9FFG8	1.2e-96	38.61	Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana OX...	[more]
Q9FMA1	1.8e-95	38.70	Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX...	[more]
Q9FJY7	2.0e-94	39.01	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]

BLAST of CSPI02G04580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJW6	4.3e-286	99.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033910 PE=4 SV=1	[more]
A0A5A7U1F2	8.1e-277	96.49	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BXN7	8.1e-277	96.49	pentatricopeptide repeat-containing protein At1g09190 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1DUP9	5.9e-235	82.44	pentatricopeptide repeat-containing protein At1g09190 OS=Momordica charantia OX=...	[more]
A0A6J1HMD5	1.3e-234	82.85	pentatricopeptide repeat-containing protein At1g09190 OS=Cucurbita maxima OX=366...	[more]

BLAST of CSPI02G04580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144815.1	8.8e-286	99.59	pentatricopeptide repeat-containing protein At1g09190 isoform X1 [Cucumis sativu...	[more]
XP_008453700.1	1.7e-276	96.49	PREDICTED: pentatricopeptide repeat-containing protein At1g09190 [Cucumis melo] ...	[more]
XP_031737169.1	1.6e-263	93.80	pentatricopeptide repeat-containing protein At1g09190 isoform X2 [Cucumis sativu...	[more]
XP_038890516.1	3.6e-255	88.22	pentatricopeptide repeat-containing protein At1g09190 [Benincasa hispida]	[more]
XP_022156351.1	1.2e-234	82.44	pentatricopeptide repeat-containing protein At1g09190 [Momordica charantia]	[more]

BLAST of CSPI02G04580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09190.1	1.4e-156	56.18	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20540.1	4.0e-103	38.45	mitochondrial editing factor 21	[more]
AT5G44230.1	8.7e-98	38.61	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G56310.1	1.3e-96	38.70	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	1.4e-95	39.01	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 143..274 e-value: 2.1E-30 score: 108.3 coord: 9..142 e-value: 1.3E-9 score: 39.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 275..483 e-value: 8.3E-40 score: 139.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 151..171 e-value: 0.23 score: 11.8 coord: 380..404 e-value: 0.042 score: 14.1 coord: 174..202 e-value: 1.5E-6 score: 28.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 204..249 e-value: 4.0E-10 score: 39.8 coord: 304..352 e-value: 2.8E-11 score: 43.4
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 279..302 e-value: 1.8E-5 score: 24.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 279..305 e-value: 1.8E-5 score: 22.6 coord: 307..340 e-value: 2.4E-4 score: 19.1 coord: 174..204 e-value: 2.0E-7 score: 28.7 coord: 205..239 e-value: 3.5E-10 score: 37.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 203..237 score: 12.517862
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 305..339 score: 10.336563
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 172..202 score: 10.840783
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 1..482
None	No IPR available	PANTHER	PTHR47928:SF148	OS11G0673000 PROTEIN	coord: 1..482

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G04580.1	CSPI02G04580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding