CSPI02G03280 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGAATTGGCATGCTTGAAGTTCCTATATAAACCATTTAGTACTAAAGAGAAAAGCCACAAGATCTCTAAGGCATAAAGAGTGAACATATCACACACCACTTAGGCTATGGCGGATTTTCGATACGGTTTCTTCGTTCGCCCGGACAACAAGAAGATCGAATCAGATCCTGCAGAATTAAAGAGCAAAGCAGGCCATATCTCCGACCCCAAATCCAAGCCACCTTATCTCGATGCCGGAGGAAGGCAACAACCTATTGCCATTCTTCCCCGAACGAGGTACGTTACACCGATCGAGAAATATACTGAAGAAGTTCATACTAAGAAGTATGAACCAGTGAAGAATTCTGATAAAGGGACTTTGAATTCACACCTTGCTATAAACCAGCGTATGGAATTCAATAAACTCTTAGCCAACGTTCAAAAGGAAGCAAGGCTGCCAAAGTATGAAATGAGATTATTAAGTGAACCAATGACTGATATTGGGAAGGCTATAGAGTGTTTGAAAGAAGTTGTGAATCTTGACTGTAGCAAAAATAATGCTTGTGCAGCATCAGCTCGTCGTAAAGACAGTTGCACAAAAACTATTGACAGCAAAGAAGCAGCACGGCGATACGGAAAGTTCGGGGCACCAGTTCCAGTGTCGAATGCTAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAAGTATAATGGTGCAGCAGTGTGAATCTAAGTGAAAGAGGTTGTACTTTGTCATGGATGTTTGTGATGATGTACTAAGTTTGCAAATATACAGGTACTGTGTCAAGTCAAAGGTGACTCCTTGCTTTTGTTTTATGTAAGCGAAAGGTGTGTGATACACTCTTTGTAATTTACACCCTTTTATATAATAATAAAGGTTAGAGTATTAAATACAAGTTTGAGACTTTTGACTGTAATATTCATATAGCTTTGTATTGGCTAAGTTCAAGAGTTGGAGACAAGTGGACTCGAACTGCTGACATCCGCCACAAAGTAAACTACCGTCGAAAAGAGGAAAAAAACATAATCTTTGTCTAACGAAATGTCTTAGAAAGAGATCAAATTATTTACTCCATCATACCTAGTATGTTAGATCTTTGGAAG TTGAATTGGCATGCTTGAAGTTCCTATATAAACCATTTAGTACTAAAGAGAAAAGCCACAAGATCTCTAAGGCATAAAGAGTGAACATATCACACACCACTTAGGCTATGGCGGATTTTCGATACGGTTTCTTCGTTCGCCCGGACAACAAGAAGATCGAATCAGATCCTGCAGAATTAAAGAGCAAAGCAGGCCATATCTCCGACCCCAAATCCAAGCCACCTTATCTCGATGCCGGAGGAAGGCAACAACCTATTGCCATTCTTCCCCGAACGAGGTACGTTACACCGATCGAGAAATATACTGAAGAAGTTCATACTAAGAAGTATGAACCAGTGAAGAATTCTGATAAAGGGACTTTGAATTCACACCTTGCTATAAACCAGCGTATGGAATTCAATAAACTCTTAGCCAACGTTCAAAAGGAAGCAAGGCTGCCAAAGTATGAAATGAGATTATTAAGTGAACCAATGACTGATATTGGGAAGGCTATAGAGTGTTTGAAAGAAGTTGTGAATCTTGACTGTAGCAAAAATAATGCTTGTGCAGCATCAGCTCGTCGTAAAGACAGTTGCACAAAAACTATTGACAGCAAAGAAGCAGCACGGCGATACGGAAAGTTCGGGGCACCAGTTCCAGTGTCGAATGCTAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAAGTATAATGGTGCAGCAGTGTGAATCTAAGTGAAAGAGGTTGTACTTTGTCATGGATGTTTGTGATGATGTACTAAGTTTGCAAATATACAGGTACTGTGTCAAGTCAAAGGTGACTCCTTGCTTTTGTTTTATGTAAGCGAAAGGTGTGTGATACACTCTTTGTAATTTACACCCTTTTATATAATAATAAAGGTTAGAGTATTAAATACAAGTTTGAGACTTTTGACTGTAATATTCATATAGCTTTGTATTGGCTAAGTTCAAGAGTTGGAGACAAGTGGACTCGAACTGCTGACATCCGCCACAAAGTAAACTACCGTCGAAAAGAGGAAAAAAACATAATCTTTGTCTAACGAAATGTCTTAGAAAGAGATCAAATTATTTACTCCATCATACCTAGTATGTTAGATCTTTGGAAG ATGGCGGATTTTCGATACGGTTTCTTCGTTCGCCCGGACAACAAGAAGATCGAATCAGATCCTGCAGAATTAAAGAGCAAAGCAGGCCATATCTCCGACCCCAAATCCAAGCCACCTTATCTCGATGCCGGAGGAAGGCAACAACCTATTGCCATTCTTCCCCGAACGAGGTACGTTACACCGATCGAGAAATATACTGAAGAAGTTCATACTAAGAAGTATGAACCAGTGAAGAATTCTGATAAAGGGACTTTGAATTCACACCTTGCTATAAACCAGCGTATGGAATTCAATAAACTCTTAGCCAACGTTCAAAAGGAAGCAAGGCTGCCAAAGTATGAAATGAGATTATTAAGTGAACCAATGACTGATATTGGGAAGGCTATAGAGTGTTTGAAAGAAGTTGTGAATCTTGACTGTAGCAAAAATAATGCTTGTGCAGCATCAGCTCGTCGTAAAGACAGTTGCACAAAAACTATTGACAGCAAAGAAGCAGCACGGCGATACGGAAAGTTCGGGGCACCAGTTCCAGTGTCGAATGCTAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAAGTATAATGGTGCAGCAGTGTGA MADFRYGFFVRPDNKKIESDPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVTPIEKYTEEVHTKKYEPVKNSDKGTLNSHLAINQRMEFNKLLANVQKEARLPKYEMRLLSEPMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEAARRYGKFGAPVPVSNANVATIDCKEAARKYNGAAV* Homology
BLAST of CSPI02G03280 vs. ExPASy TrEMBL
Match: A0A0A0LG87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G012700 PE=4 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 5.6e-107 Identity = 198/200 (99.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CSPI02G03280 vs. ExPASy TrEMBL
Match: A0A5A7VCJ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001150 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 1.3e-87 Identity = 169/200 (84.50%), Postives = 182/200 (91.00%), Query Frame = 0
BLAST of CSPI02G03280 vs. ExPASy TrEMBL
Match: E5GBR2 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 3.8e-87 Identity = 168/200 (84.00%), Postives = 181/200 (90.50%), Query Frame = 0
BLAST of CSPI02G03280 vs. ExPASy TrEMBL
Match: A0A6P5YSZ0 (uncharacterized protein LOC111294277 OS=Durio zibethinus OX=66656 GN=LOC111294277 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 9.5e-06 Identity = 38/89 (42.70%), Postives = 50/89 (56.18%), Query Frame = 0
BLAST of CSPI02G03280 vs. ExPASy TrEMBL
Match: A0A1R3JVS0 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_13630 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.2e-05 Identity = 39/93 (41.94%), Postives = 49/93 (52.69%), Query Frame = 0
BLAST of CSPI02G03280 vs. NCBI nr
Match: KGN60838.1 (hypothetical protein Csa_019431 [Cucumis sativus]) HSP 1 Score: 396.7 bits (1018), Expect = 1.2e-106 Identity = 198/200 (99.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CSPI02G03280 vs. NCBI nr
Match: KAA0063635.1 (hypothetical protein E6C27_scaffold329G001480 [Cucumis melo var. makuwa] >TYK18391.1 hypothetical protein E5676_scaffold456G001150 [Cucumis melo var. makuwa]) HSP 1 Score: 332.4 bits (851), Expect = 2.7e-87 Identity = 169/200 (84.50%), Postives = 182/200 (91.00%), Query Frame = 0
BLAST of CSPI02G03280 vs. NCBI nr
Match: ADN33904.1 (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 330.9 bits (847), Expect = 7.8e-87 Identity = 168/200 (84.00%), Postives = 181/200 (90.50%), Query Frame = 0
BLAST of CSPI02G03280 vs. NCBI nr
Match: KAG6599284.1 (putative nucleolar protein 5-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 198.0 bits (502), Expect = 7.9e-47 Identity = 118/215 (54.88%), Postives = 138/215 (64.19%), Query Frame = 0
BLAST of CSPI02G03280 vs. NCBI nr
Match: XP_022743270.1 (uncharacterized protein LOC111294277 [Durio zibethinus] >XP_022743271.1 uncharacterized protein LOC111294277 [Durio zibethinus]) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-05 Identity = 38/89 (42.70%), Postives = 50/89 (56.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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