CSPI02G03220 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G03220
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Rubredoxin
Location	Chr2: 2207541 .. 2209580 (+)
RNA-Seq Expression	CSPI02G03220
Synteny	CSPI02G03220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTTTTGCAACCATAAAGAAAAATCTTGACCAACTACCATTCATATTGATTCATAATTTTGGGCTTTTCAAGTAGATGAGTAAAAGTAAAGCCCAAAAAGAAACCCCAATTGGACACACTCCAATCTTCTTCCTTCCCCACCACCACACCTTATCCTCCACCTCCTCTTTCTCTTACACAGAAGCAAAAACCAGCATATACCCTTCCCCCATTCCATGGATCCTTCTGATTCTTCTTCTTCTACTTCTTCCTTTTGAATTTCCCTTCTTTTTTAAACACACACAAAAATCAGAACCTTCAAACACAAATCCCACCTCCATCAATGGCTGTTTATTCCTCAGCTAGACCCACCACTCTCTCCTTCCATCTCTCCCAACCTTCCCTTCCAATTCCCAGATTCAACTTCAAACCCCCCATCCCCGCCACCGCCGCCATTCCGCCGTTGCTGAGATCATCTGCGGCGAGACCCATCTCCATTTTCACCCTCAACTCCATCGACGTCTCTAAGGAAGACAAACCCACCTCTGATGACCCAAATACGCCGGTGCCACTGCCGGTTGTGGCGGTTGAAGAGGAGGAGGAGAAGTTTGATAAGCGACGGCTGGAGGAGAAATTTGCAGTGTTGAATACAGGAATATATGAGTGCAGGTCATGTGGACATAAGTTCGATGAGGCGGTCGGGGATCCGACGTATCCAATAGCGCCGGGACTGCCGTTCGAGCAGCTGCCGGAGGACTGGCGGTGTCCGACGTGTGGGGCGGCAAAGAGCTTCTTTGAGAGTAAGAGTGTGGAGATTGCTGGGTTTGCTCAGAATCAGCAGTATGGACTTGGAGGGAACACTTTGACTTCTGGGCAGAAGGCTGTGCTTATATATGGAAGCTTGTTCTTCTTCTTTGCTCTTTTCCTCTCCGGCTATTTCTTACAATGATGGATGAGATTGGATTCATCAATCAGGTAACAAACTCTGTTTTTTTAATGAAAGGTGTGTATATATATTTAAATTTTCAGTCAAATTGGAAAATAATAATAATAACAATAACAACTATATTTAAGCTCTACAGTCGGTGTGTATAAGTTTAATATTCAAAAACCAAACAACTAACCAAATAGTATTAGCTTTCTGTCTTTTTAAAAAAATGGTTAGAGTTGTGATTCTGACTTATTTAGTTCTTTTCTTTCATTTTTTGAATTATAACTAGTTGAATTCACATCTTTAATTATAACTAGTTTAATTATGTTTAGATTTATACTTATTAGTTATGAATTATATTTTTCTTTAATCTATCGTCGTTGTAGCTAGAAAAATCACTTGACGGAAGTTAAAGTTGGAACTAGAATTCAAGCCAATAGGTAACACAATGAGCACATTGTCATTACTATGCTAAGTACATGAAATTAGACCAAGGATTAGTACGATTCAAAGTCTAATATTTGTAATGAAACGTGAAAGTGAAACTGACACATTCCATTATGAAATTTTTAAATTTTGTTTTCCTTTTCATTTTGTTGTATACTTTACAAACTCTAATGCATAAAATTGTGGAATTTCAGGTGGATTGAGTAAAATTTATAAGGGAGTTTGTGTATCATGTTTGGTGAACTCCAAATTCTTACTGAATTCTTTGTGTTGACAAAACAAAAGGCAAATCATACTGTTGAATTATATATAAACTTCACTCTTAATCTTCTTCATCTTGGTGAAGTCAATGAATTCGACAATGTAATAAAGTCATTTTCCATATGGTCAGGTAAAGAGATAAACACAGCTTTTGGATTCATGGCGAACCACCAAAATTTTGGGGTAAAAACTTACGATTATATTGAGAGTGACACCCACACTTCCATCTTTTATTATACACCAAATGACATGTTTGCGATGTTTAAGAACTTTCCTTCTTAATAATGATATATCCACCATAACATGAATATAGTTTAAAATGCATGATTTGCTACCTTTAGCAATTTTGCATTCTTCCCTCATGCAATGAAAACGACAGTACCAATTGAATCAGCGCTCCACCTAAGTTTGAGCTGAAGA

mRNA sequence

ATTCTTTTGCAACCATAAAGAAAAATCTTGACCAACTACCATTCATATTGATTCATAATTTTGGGCTTTTCAAGTAGATGAGTAAAAGTAAAGCCCAAAAAGAAACCCCAATTGGACACACTCCAATCTTCTTCCTTCCCCACCACCACACCTTATCCTCCACCTCCTCTTTCTCTTACACAGAAGCAAAAACCAGCATATACCCTTCCCCCATTCCATGGATCCTTCTGATTCTTCTTCTTCTACTTCTTCCTTTTGAATTTCCCTTCTTTTTTAAACACACACAAAAATCAGAACCTTCAAACACAAATCCCACCTCCATCAATGGCTGTTTATTCCTCAGCTAGACCCACCACTCTCTCCTTCCATCTCTCCCAACCTTCCCTTCCAATTCCCAGATTCAACTTCAAACCCCCCATCCCCGCCACCGCCGCCATTCCGCCGTTGCTGAGATCATCTGCGGCGAGACCCATCTCCATTTTCACCCTCAACTCCATCGACGTCTCTAAGGAAGACAAACCCACCTCTGATGACCCAAATACGCCGGTGCCACTGCCGGTTGTGGCGGTTGAAGAGGAGGAGGAGAAGTTTGATAAGCGACGGCTGGAGGAGAAATTTGCAGTGTTGAATACAGGAATATATGAGTGCAGGTCATGTGGACATAAGTTCGATGAGGCGGTCGGGGATCCGACGTATCCAATAGCGCCGGGACTGCCGTTCGAGCAGCTGCCGGAGGACTGGCGGTGTCCGACGTGTGGGGCGGCAAAGAGCTTCTTTGAGAGTAAGAGTGTGGAGATTGCTGGGTTTGCTCAGAATCAGCAGTATGGACTTGGAGGGAACACTTTGACTTCTGGGCAGAAGGCTGTGCTTATATATGGAAGCTTGTTCTTCTTCTTTGCTCTTTTCCTCTCCGGCTATTTCTTACAATGATGGATGAGATTGGATTCATCAATCAGGTAAAGAGATAAACACAGCTTTTGGATTCATGGCGAACCACCAAAATTTTGGGGTAAAAACTTACGATTATATTGAGAGTGACACCCACACTTCCATCTTTTATTATACACCAAATGACATGTTTGCGATGTTTAAGAACTTTCCTTCTTAATAATGATATATCCACCATAACATGAATATAGTTTAAAATGCATGATTTGCTACCTTTAGCAATTTTGCATTCTTCCCTCATGCAATGAAAACGACAGTACCAATTGAATCAGCGCTCCACCTAAGTTTGAGCTGAAGA

Coding sequence (CDS)

ATGGCTGTTTATTCCTCAGCTAGACCCACCACTCTCTCCTTCCATCTCTCCCAACCTTCCCTTCCAATTCCCAGATTCAACTTCAAACCCCCCATCCCCGCCACCGCCGCCATTCCGCCGTTGCTGAGATCATCTGCGGCGAGACCCATCTCCATTTTCACCCTCAACTCCATCGACGTCTCTAAGGAAGACAAACCCACCTCTGATGACCCAAATACGCCGGTGCCACTGCCGGTTGTGGCGGTTGAAGAGGAGGAGGAGAAGTTTGATAAGCGACGGCTGGAGGAGAAATTTGCAGTGTTGAATACAGGAATATATGAGTGCAGGTCATGTGGACATAAGTTCGATGAGGCGGTCGGGGATCCGACGTATCCAATAGCGCCGGGACTGCCGTTCGAGCAGCTGCCGGAGGACTGGCGGTGTCCGACGTGTGGGGCGGCAAAGAGCTTCTTTGAGAGTAAGAGTGTGGAGATTGCTGGGTTTGCTCAGAATCAGCAGTATGGACTTGGAGGGAACACTTTGACTTCTGGGCAGAAGGCTGTGCTTATATATGGAAGCTTGTTCTTCTTCTTTGCTCTTTTCCTCTCCGGCTATTTCTTACAATGA

Protein sequence

MAVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDVSKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIYGSLFFFFALFLSGYFLQ*

Homology

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BLAST of CSPI02G03220 vs. ExPASy Swiss-Prot
Match: P73068 (Rubredoxin OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rub PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-19
Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 91  KRRLEEKFAVLNTGIYECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSF 150
           +R  E+  A L +  +ECR+CG+ +  + GD    ++PG PFE LP +W+CP CGA +++
Sbjct: 3   ERPPEKTLAELASPNHECRACGYVYIPSQGDQKTSVSPGTPFEALPLNWKCPVCGAPRNY 62

Query: 151 FESKSVEIA--GFAQNQQYGLGGNTLTSGQKAVLIYGSLFFFFALFLSGY 199
           F S     A  GFA+N  YG G N ++ G+K +LI+GSLF  F  FLS Y
Sbjct: 63  FISTGETDAPSGFAENLNYGFGFNRMSGGKKNLLIFGSLFVIFLFFLSLY 112

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BLAST of CSPI02G03220 vs. ExPASy Swiss-Prot
Match: Q9XBL8 (Rubredoxin OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=rub PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 8.0e-18
Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 99  AVLNTGI--YECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--K 158
           AV NT +  +ECRSCG+ ++   GD  + IAP  PF +LP +WRCP C A K+ F +   
Sbjct: 5   AVENTVLDRFECRSCGYVYEPEKGDSKHDIAPETPFAELPINWRCPVCTAKKAAFSNIGP 64

Query: 159 SVEIAGFAQNQQYGLGGNTLTSGQKAVLIYGSLFFFFALFLSGYFLQ 202
           +   +GF +N  YGLG N LT  QK +LI+G+L   F  F+S Y LQ
Sbjct: 65  AGTASGFRENLGYGLGVNKLTPAQKNILIFGALALGFLFFISLYGLQ 111

[Close]

BLAST of CSPI02G03220 vs. ExPASy Swiss-Prot
Match: Q9WWN1 (Rubredoxin OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rub PE=3 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 1.4e-17
Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 99  AVLNTGI--YECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--K 158
           AV NT +  +ECRSCG+ ++   GD  + IAP  PF +LP +WRCP C A K+ F +   
Sbjct: 5   AVENTVLDRFECRSCGYVYEPEKGDNKHDIAPETPFAELPINWRCPVCTAKKAAFTNIGP 64

Query: 159 SVEIAGFAQNQQYGLGGNTLTSGQKAVLIYGSLFFFFALFLSGYFLQ 202
           +   +GF +N  YGLG N LT  QK +LI+G+L   F  F+S Y LQ
Sbjct: 65  AGTASGFRENLGYGLGVNKLTPAQKNILIFGALALGFLFFISLYGLQ 111

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BLAST of CSPI02G03220 vs. ExPASy Swiss-Prot
Match: Q9FDN6 (High molecular weight rubredoxin OS=Moorella thermoacetica (strain ATCC 39073 / JCM 9320) OX=264732 GN=hrb PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.6e-11
Identity = 33/80 (41.25%), Postives = 40/80 (50.00%), Query Frame = 0


Query: 73  TPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVGDPTYPIAPGLPF 132
           TP   P   V  E++K            L +  Y+C  C + +D   GDP + IAPG PF
Sbjct: 158 TPKTAPTFTVGREKDK----------TALASPKYQCTICNYVYDPVQGDPEHGIAPGTPF 217

Query: 133 EQLPEDWRCPTCGAAKSFFE 153
             LPEDW CP CGA K  FE
Sbjct: 218 ADLPEDWTCPICGAGKDAFE 227

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BLAST of CSPI02G03220 vs. ExPASy Swiss-Prot
Match: P00270 (Rubredoxin OS=Desulfovibrio gigas OX=879 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.5e-11
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 105 IYECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESK 155
           IY C  CG+++D A GDP   I PG  FE LP+DW CP CGA+K  FE +
Sbjct: 3   IYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDAFEKQ 52

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BLAST of CSPI02G03220 vs. ExPASy TrEMBL
Match: A0A0A0LJE4 (Rubredoxin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G012140 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.7e-109
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDV 60
           MAVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDV
Sbjct: 1   MAVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDV 60

Query: 61  SKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120
           SKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVG
Sbjct: 61  SKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120

Query: 121 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 180
           DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA
Sbjct: 121 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 180

Query: 181 VLIYGSLFFFFALFLSGYFLQ 202
           VLIYGSLFFFFALFLSGYFLQ
Sbjct: 181 VLIYGSLFFFFALFLSGYFLQ 201

[Close]

BLAST of CSPI02G03220 vs. ExPASy TrEMBL
Match: A0A1S4E0U3 (uncharacterized protein LOC103499548 OS=Cucumis melo OX=3656 GN=LOC103499548 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.9e-99
Identity = 189/201 (94.03%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MAVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDV 60
           MAVYSSARP TLSFHLSQPSLPIPRFNFKPP+ AT  IPPL R SAARPISIFTLNSIDV
Sbjct: 79  MAVYSSARP-TLSFHLSQPSLPIPRFNFKPPVAAT--IPPLQRLSAARPISIFTLNSIDV 138

Query: 61  SKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120
           SKEDKPTSDDPNTP P PVVAVE+EEEKFDKRRLEE+FAVLNTGIYECRSCGHKFDEAVG
Sbjct: 139 SKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVG 198

Query: 121 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 180
           DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA
Sbjct: 199 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 258

Query: 181 VLIYGSLFFFFALFLSGYFLQ 202
           VLIYGSL FFFALFLSGYFLQ
Sbjct: 259 VLIYGSLLFFFALFLSGYFLQ 276

[Close]

BLAST of CSPI02G03220 vs. ExPASy TrEMBL
Match: A0A5A7VDM5 (Rubredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001210 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.9e-99
Identity = 189/201 (94.03%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MAVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDV 60
           MAVYSSARP TLSFHLSQPSLPIPRFNFKPP+ AT  IPPL R SAARPISIFTLNSIDV
Sbjct: 1   MAVYSSARP-TLSFHLSQPSLPIPRFNFKPPVAAT--IPPLQRLSAARPISIFTLNSIDV 60

Query: 61  SKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120
           SKEDKPTSDDPNTP P PVVAVE+EEEKFDKRRLEE+FAVLNTGIYECRSCGHKFDEAVG
Sbjct: 61  SKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVG 120

Query: 121 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 180
           DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA
Sbjct: 121 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 180

Query: 181 VLIYGSLFFFFALFLSGYFLQ 202
           VLIYGSL FFFALFLSGYFLQ
Sbjct: 181 VLIYGSLLFFFALFLSGYFLQ 198

[Close]

BLAST of CSPI02G03220 vs. ExPASy TrEMBL
Match: E5GBR8 (Rubredoxin OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.9e-99
Identity = 189/201 (94.03%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MAVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDV 60
           MAVYSSARP TLSFHLSQPSLPIPRFNFKPP+ AT  IPPL R SAARPISIFTLNSIDV
Sbjct: 1   MAVYSSARP-TLSFHLSQPSLPIPRFNFKPPVAAT--IPPLQRLSAARPISIFTLNSIDV 60

Query: 61  SKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120
           SKEDKPTSDDPNTP P PVVAVE+EEEKFDKRRLEE+FAVLNTGIYECRSCGHKFDEAVG
Sbjct: 61  SKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVG 120

Query: 121 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 180
           DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA
Sbjct: 121 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 180

Query: 181 VLIYGSLFFFFALFLSGYFLQ 202
           VLIYGSL FFFALFLSGYFLQ
Sbjct: 181 VLIYGSLLFFFALFLSGYFLQ 198

[Close]

BLAST of CSPI02G03220 vs. ExPASy TrEMBL
Match: A0A6J1KAE6 (uncharacterized protein LOC111493686 OS=Cucurbita maxima OX=3661 GN=LOC111493686 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 5.0e-87
Identity = 171/200 (85.50%), Postives = 179/200 (89.50%), Query Frame = 0


Query: 4   YSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDVSKE 63
           Y+SARP TLSFHL QPS+P PRFNFKPP+    A PPL RS+AARPI IFTLNSIDVSKE
Sbjct: 5   YASARP-TLSFHLYQPSVPSPRFNFKPPL---VAFPPLQRSAAARPIPIFTLNSIDVSKE 64

Query: 64  DKPTSDDPNTPVPLPVVAVEEE--EEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVGD 123
           DKPTSDDP+    L  V  EEE  EEK D+RR+EEKFAVLNTGIYECRSCGHKFDEAVGD
Sbjct: 65  DKPTSDDPD----LAAVVGEEEAAEEKLDRRRIEEKFAVLNTGIYECRSCGHKFDEAVGD 124

Query: 124 PTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAV 183
           PTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAV
Sbjct: 125 PTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAV 184

Query: 184 LIYGSLFFFFALFLSGYFLQ 202
           LIYG+LFFFFALFLSGYFLQ
Sbjct: 185 LIYGTLFFFFALFLSGYFLQ 196

[Close]

BLAST of CSPI02G03220 vs. NCBI nr
Match: XP_004139218.2 (uncharacterized protein LOC101219075 [Cucumis sativus] >XP_011648770.1 uncharacterized protein LOC101219075 [Cucumis sativus] >XP_011648771.1 uncharacterized protein LOC101219075 [Cucumis sativus] >KGN60832.1 hypothetical protein Csa_019394 [Cucumis sativus])

HSP 1 Score: 404.4 bits (1038), Expect = 5.6e-109
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDV 60
           MAVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDV
Sbjct: 1   MAVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDV 60

Query: 61  SKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120
           SKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVG
Sbjct: 61  SKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120

Query: 121 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 180
           DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA
Sbjct: 121 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 180

Query: 181 VLIYGSLFFFFALFLSGYFLQ 202
           VLIYGSLFFFFALFLSGYFLQ
Sbjct: 181 VLIYGSLFFFFALFLSGYFLQ 201

[Close]

BLAST of CSPI02G03220 vs. NCBI nr
Match: ADN33910.1 (rubredoxin [Cucumis melo subsp. melo] >KAA0063629.1 rubredoxin [Cucumis melo var. makuwa] >TYK18397.1 rubredoxin [Cucumis melo var. makuwa])

HSP 1 Score: 371.7 bits (953), Expect = 4.0e-99
Identity = 189/201 (94.03%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MAVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDV 60
           MAVYSSARP TLSFHLSQPSLPIPRFNFKPP+ AT  IPPL R SAARPISIFTLNSIDV
Sbjct: 1   MAVYSSARP-TLSFHLSQPSLPIPRFNFKPPVAAT--IPPLQRLSAARPISIFTLNSIDV 60

Query: 61  SKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120
           SKEDKPTSDDPNTP P PVVAVE+EEEKFDKRRLEE+FAVLNTGIYECRSCGHKFDEAVG
Sbjct: 61  SKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVG 120

Query: 121 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 180
           DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA
Sbjct: 121 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 180

Query: 181 VLIYGSLFFFFALFLSGYFLQ 202
           VLIYGSL FFFALFLSGYFLQ
Sbjct: 181 VLIYGSLLFFFALFLSGYFLQ 198

[Close]

BLAST of CSPI02G03220 vs. NCBI nr
Match: XP_016901839.1 (PREDICTED: uncharacterized protein LOC103499548 [Cucumis melo] >XP_016901842.1 PREDICTED: uncharacterized protein LOC103499548 [Cucumis melo])

HSP 1 Score: 371.7 bits (953), Expect = 4.0e-99
Identity = 189/201 (94.03%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MAVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDV 60
           MAVYSSARP TLSFHLSQPSLPIPRFNFKPP+ AT  IPPL R SAARPISIFTLNSIDV
Sbjct: 79  MAVYSSARP-TLSFHLSQPSLPIPRFNFKPPVAAT--IPPLQRLSAARPISIFTLNSIDV 138

Query: 61  SKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120
           SKEDKPTSDDPNTP P PVVAVE+EEEKFDKRRLEE+FAVLNTGIYECRSCGHKFDEAVG
Sbjct: 139 SKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVG 198

Query: 121 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 180
           DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA
Sbjct: 199 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 258

Query: 181 VLIYGSLFFFFALFLSGYFLQ 202
           VLIYGSL FFFALFLSGYFLQ
Sbjct: 259 VLIYGSLLFFFALFLSGYFLQ 276

[Close]

BLAST of CSPI02G03220 vs. NCBI nr
Match: XP_038891199.1 (rubredoxin [Benincasa hispida])

HSP 1 Score: 364.4 bits (934), Expect = 6.4e-97
Identity = 188/207 (90.82%), Postives = 192/207 (92.75%), Query Frame = 0


Query: 1   MAVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATA------AIPPLLRSSAARPISIFT 60
           MA YSSARP TLSFHLSQPSLPIPRFNFKPP  A+A      A+PPL RS+AARP SIFT
Sbjct: 1   MAAYSSARP-TLSFHLSQPSLPIPRFNFKPPASASAAAATVPAVPPLQRSAAARPNSIFT 60

Query: 61  LNSIDVSKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHK 120
           LNSIDVSKEDKPTSDDPNTP P PVVAV +EEEKFDKRRLEEKFAVLNTGIYECRSCGHK
Sbjct: 61  LNSIDVSKEDKPTSDDPNTPSPPPVVAV-DEEEKFDKRRLEEKFAVLNTGIYECRSCGHK 120

Query: 121 FDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTL 180
           FDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTL
Sbjct: 121 FDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTL 180

Query: 181 TSGQKAVLIYGSLFFFFALFLSGYFLQ 202
           TSGQKAVLIYGSLFFFFALFLSGYFLQ
Sbjct: 181 TSGQKAVLIYGSLFFFFALFLSGYFLQ 205

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BLAST of CSPI02G03220 vs. NCBI nr
Match: XP_023545844.1 (uncharacterized protein LOC111805157 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.7 bits (857), Expect = 5.4e-88
Identity = 169/200 (84.50%), Postives = 179/200 (89.50%), Query Frame = 0


Query: 2   AVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPATAAIPPLLRSSAARPISIFTLNSIDVS 61
           A Y+SARP TLSFHLSQPS+P PRFNFKPP+    A PPL RS+AARPI IFTLNSIDVS
Sbjct: 4   AAYASARP-TLSFHLSQPSVPSPRFNFKPPL---VAFPPLQRSAAARPIPIFTLNSIDVS 63

Query: 62  KEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVGD 121
           KEDKPTS+DP+    +   A E  EEK D+RR+EEKFAVLNTGIYECRSCGHKFDEAVGD
Sbjct: 64  KEDKPTSEDPDLAAVVGEEAAEAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGD 123

Query: 122 PTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAV 181
           PTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAV
Sbjct: 124 PTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAV 183

Query: 182 LIYGSLFFFFALFLSGYFLQ 202
           LIYG+LFFFFALFLSGYFLQ
Sbjct: 184 LIYGTLFFFFALFLSGYFLQ 199

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BLAST of CSPI02G03220 vs. TAIR 10
Match: AT1G54500.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 202.2 bits (513), Expect = 3.9e-52
Identity = 97/137 (70.80%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 69  DDPNTPV----PLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAVGDPTY 128
           DD  TP+           +E E+  +KRR+EEKFAVLNTGIYECRSCG+K+DE+ GDP+Y
Sbjct: 59  DDAATPLSSSDQTQETETKEVEDTIEKRRMEEKFAVLNTGIYECRSCGYKYDESAGDPSY 118

Query: 129 PIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIY 188
           PI PG  F++LPEDWRCPTCGAA+SFFESK VEIAGFAQNQQYGLGGN LTSGQK  LI+
Sbjct: 119 PIPPGFQFDKLPEDWRCPTCGAAQSFFESKMVEIAGFAQNQQYGLGGNALTSGQKTGLIF 178

Query: 189 GSLFFFFALFLSGYFLQ 202
           GSL  FFALFLSGYF+Q
Sbjct: 179 GSLLLFFALFLSGYFIQ 195

The following BLAST results are available for this feature:

BLAST of CSPI02G03220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P73068	1.1e-19	43.64	Rubredoxin OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rub PE=...	[more]
Q9XBL8	8.0e-18	45.79	Rubredoxin OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=...	[more]
Q9WWN1	1.4e-17	45.79	Rubredoxin OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=...	[more]
Q9FDN6	5.6e-11	41.25	High molecular weight rubredoxin OS=Moorella thermoacetica (strain ATCC 39073 / ...	[more]
P00270	9.5e-11	54.00	Rubredoxin OS=Desulfovibrio gigas OX=879 PE=1 SV=1	[more]

BLAST of CSPI02G03220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJE4	2.7e-109	100.00	Rubredoxin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G01...	[more]
A0A1S4E0U3	1.9e-99	94.03	uncharacterized protein LOC103499548 OS=Cucumis melo OX=3656 GN=LOC103499548 PE=...	[more]
A0A5A7VDM5	1.9e-99	94.03	Rubredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001210 PE...	[more]
E5GBR8	1.9e-99	94.03	Rubredoxin OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A6J1KAE6	5.0e-87	85.50	uncharacterized protein LOC111493686 OS=Cucurbita maxima OX=3661 GN=LOC111493686...	[more]

BLAST of CSPI02G03220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139218.2	5.6e-109	100.00	uncharacterized protein LOC101219075 [Cucumis sativus] >XP_011648770.1 uncharact...	[more]
ADN33910.1	4.0e-99	94.03	rubredoxin [Cucumis melo subsp. melo] >KAA0063629.1 rubredoxin [Cucumis melo var...	[more]
XP_016901839.1	4.0e-99	94.03	PREDICTED: uncharacterized protein LOC103499548 [Cucumis melo] >XP_016901842.1 P...	[more]
XP_038891199.1	6.4e-97	90.82	rubredoxin [Benincasa hispida]	[more]
XP_023545844.1	5.4e-88	84.50	uncharacterized protein LOC111805157 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI02G03220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54500.1	3.9e-52	70.80	Rubredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024935	Rubredoxin domain	PRINTS	PR00163	RUBREDOXIN	coord: 135..151 score: 57.12 coord: 105..121 score: 44.12
IPR024935	Rubredoxin domain	PFAM	PF00301	Rubredoxin	coord: 106..151 e-value: 1.9E-17 score: 63.0
IPR024935	Rubredoxin domain	CDD	cd00730	rubredoxin	coord: 106..152 e-value: 3.225E-22 score: 83.1242
None	No IPR available	GENE3D	2.20.28.10		coord: 98..153 e-value: 1.1E-21 score: 78.3
None	No IPR available	PIRSR	PIRSR000071-1	PIRSR000071-1	coord: 106..153 e-value: 9.1E-19 score: 65.0
None	No IPR available	PANTHER	PTHR47627	RUBREDOXIN	coord: 10..201
None	No IPR available	SUPERFAMILY	57802	Rubredoxin-like	coord: 102..168
IPR018527	Rubredoxin, iron-binding site	PROSITE	PS00202	RUBREDOXIN	coord: 135..145
IPR024934	Rubredoxin-like domain	PROSITE	PS50903	RUBREDOXIN_LIKE	coord: 103..154 score: 13.153681

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G03220.2	CSPI02G03220.2	mRNA
CSPI02G03220.1	CSPI02G03220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043448	alkane catabolic process
biological_process	GO:0022900	electron transport chain
biological_process	GO:0010207	photosystem II assembly
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0046872	metal ion binding