CSPI02G02950 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G02950
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	pathogenesis-related protein PR-4-like
Location	Chr2: 2001456 .. 2002250 (-)
RNA-Seq Expression	CSPI02G02950
Synteny	CSPI02G02950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAATTTCTCTATAAATTAAAGGCACTCTCCCAATGAAACTTTACCTACAAACAAAAAGAAAAAGGCTACAAAAGTTTTATAAAAGAGAGAGTTTATATTGTTAGAGAGAATTAAGAAAGGCAAGGAATGGGGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACCTATCATTTGTACAACCCACAAGACATCAATTGGGATTATCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCCGACAAGCCTTTGGAATGGCGTCGTCAATACGGTTGGACTGCCTTCTGTGGCCCTGTTGGCCCTCGTGGCCGTGATTCTTGTGGACGTTGTTTGAGGGTAAGCAAATCTTTTAGTTGATGTGATTTTCATTGTAAATAACCTCAAAGCCATTTAATCTACCATAAAAAAAGAAAGGAGAGTATTTTTAATTTGAGAAACTTTGATGGATATAATGCAGGTGACTAACACTGAAACGGGAGCTTCGGAAATAGTAAGAATTGTTGATCAATGCGCAAATGGAGGGCTAGATTTAGACGTGAATGTGTTCAGGAGAATTGATACTAATGGAAATGGAAACTTCAGAGGCCATCTTATCGTCAACTATCAATTTGTCAATTGCTAAGATCACTATTTTAAATTTCATTTCATTCCTCCTAGAAGAAGAAAGAAAGCCATGTTCTAATGAATAAAGTATATGAATAATAATAAAGTATGAAATAAAGGTTATTTTTCTTTAAT

mRNA sequence

CCAAAATTTCTCTATAAATTAAAGGCACTCTCCCAATGAAACTTTACCTACAAACAAAAAGAAAAAGGCTACAAAAGTTTTATAAAAGAGAGAGTTTATATTGTTAGAGAGAATTAAGAAAGGCAAGGAATGGGGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACCTATCATTTGTACAACCCACAAGACATCAATTGGGATTATCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCCGACAAGCCTTTGGAATGGCGTCGTCAATACGGTTGGACTGCCTTCTGTGGCCCTGTTGGCCCTCGTGGCCGTGATTCTTGTGGACGTTGTTTGAGGGTGACTAACACTGAAACGGGAGCTTCGGAAATAGTAAGAATTGTTGATCAATGCGCAAATGGAGGGCTAGATTTAGACGTGAATGTGTTCAGGAGAATTGATACTAATGGAAATGGAAACTTCAGAGGCCATCTTATCGTCAACTATCAATTTGTCAATTGCTAAGATCACTATTTTAAATTTCATTTCATTCCTCCTAGAAGAAGAAAGAAAGCCATGTTCTAATGAATAAAGTATATGAATAATAATAAAGTATGAAATAAAGGTTATTTTTCTTTAAT

Coding sequence (CDS)

ATGGGGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACCTATCATTTGTACAACCCACAAGACATCAATTGGGATTATCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCCGACAAGCCTTTGGAATGGCGTCGTCAATACGGTTGGACTGCCTTCTGTGGCCCTGTTGGCCCTCGTGGCCGTGATTCTTGTGGACGTTGTTTGAGGGTGACTAACACTGAAACGGGAGCTTCGGAAATAGTAAGAATTGTTGATCAATGCGCAAATGGAGGGCTAGATTTAGACGTGAATGTGTTCAGGAGAATTGATACTAATGGAAATGGAAACTTCAGAGGCCATCTTATCGTCAACTATCAATTTGTCAATTGCTAA

Protein sequence

MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC*

Homology

[Close]

BLAST of CSPI02G02950 vs. ExPASy Swiss-Prot
Match: P29063 (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.1e-56
Identity = 98/137 (71.53%), Postives = 116/137 (84.67%), Query Frame = 0


Query: 6   IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQ 65
           + + L++   ++++A AQSATNVR+TYHLYNPQ+INWD   AS FCATWDADKPL WR++
Sbjct: 9   LCVALLIMSVMMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQK 68

Query: 66  YGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDTNG 125
           YGWTAFCGP GPRG+DSCGRCLRVTNT TG    VRIVDQC+NGGLDLDVNVF ++DTNG
Sbjct: 69  YGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNG 128

Query: 126 NGNFRGHLIVNYQFVNC 143
            G  +GHLIVNY+FVNC
Sbjct: 129 LGYQQGHLIVNYEFVNC 145

[Close]

BLAST of CSPI02G02950 vs. ExPASy Swiss-Prot
Match: P32045 (Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.1e-56
Identity = 99/127 (77.95%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 16  VLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPV 75
           ++++A AQSATNVRATYHLYNPQ+INWD   ASV+CATWDADKPLEWRR+YGWTAFCGP 
Sbjct: 17  MMAVAAAQSATNVRATYHLYNPQNINWDLRTASVYCATWDADKPLEWRRRYGWTAFCGPA 76

Query: 76  GPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIV 135
           GP G+ SCGRCLRVTNT TG  E VRIVDQC NGGLDLDVNVF R+DTNG G  RG+L V
Sbjct: 77  GPTGQASCGRCLRVTNTGTGTQETVRIVDQCRNGGLDLDVNVFNRLDTNGLGYQRGNLNV 136

Query: 136 NYQFVNC 143
           NY+FVNC
Sbjct: 137 NYEFVNC 143

[Close]

BLAST of CSPI02G02950 vs. ExPASy Swiss-Prot
Match: P29062 (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.8e-56
Identity = 98/137 (71.53%), Postives = 115/137 (83.94%), Query Frame = 0


Query: 6   IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQ 65
           + + L++   V+++A AQSATNVR+TYHLYNPQ+INWD   AS FCATWDADKPL WR++
Sbjct: 9   LCVALLIISMVMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQK 68

Query: 66  YGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDTNG 125
           YGWTAFCGP GPRG+DSCGRCLRVTNT TG    VRIVDQC+NGGLDLDVNVF ++DTNG
Sbjct: 69  YGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDTNG 128

Query: 126 NGNFRGHLIVNYQFVNC 143
            G  +GHL VNY+FVNC
Sbjct: 129 VGYQQGHLTVNYEFVNC 145

[Close]

BLAST of CSPI02G02950 vs. ExPASy Swiss-Prot
Match: P09761 (Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 9.0e-56
Identity = 92/119 (77.31%), Postives = 106/119 (89.08%), Query Frame = 0


Query: 24  SATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSC 83
           SA NVRATYH+YNPQ++ WD    S +C+TWDA+KPL WR++YGWTAFCGPVGPRGRDSC
Sbjct: 79  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSC 138

Query: 84  GRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC 143
           G+CLRVTNT TGA   VRIVDQC+NGGLDLDVNVFR+IDT+GNGN +GHLIVNYQFV+C
Sbjct: 139 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDC 197

[Close]

BLAST of CSPI02G02950 vs. ExPASy Swiss-Prot
Match: P09762 (Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.9e-53
Identity = 89/119 (74.79%), Postives = 103/119 (86.55%), Query Frame = 0


Query: 24  SATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSC 83
           SA NVRATYH+YNPQ++ WD    S +C+TWDA+KP  WR +YGWTAFCGPVGPRGRDSC
Sbjct: 78  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSC 137

Query: 84  GRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC 143
           G+CLRVTNT TGA   VRIVDQC+NGGLDLD+NVF++IDT+G GN +GHLIVNYQFVNC
Sbjct: 138 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVNC 196

[Close]

BLAST of CSPI02G02950 vs. ExPASy TrEMBL
Match: A0A0A0LIC8 (Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010390 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 3.9e-78
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL
Sbjct: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR
Sbjct: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 143
           IDTNGNGN RGHLIVNYQFVNC
Sbjct: 121 IDTNGNGNLRGHLIVNYQFVNC 142

[Close]

BLAST of CSPI02G02950 vs. ExPASy TrEMBL
Match: A0A5D3D4G8 (Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001500 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 2.8e-76
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M KGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRR+YGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 143
           IDTNGNGNFRGHL VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]

BLAST of CSPI02G02950 vs. ExPASy TrEMBL
Match: A0A1S3C3H6 (pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496070 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 2.8e-76
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M KGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRR+YGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 143
           IDTNGNGNFRGHL VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]

BLAST of CSPI02G02950 vs. ExPASy TrEMBL
Match: A0A6J1K9X1 (pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC111493583 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.4e-72
Identity = 130/142 (91.55%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M KGS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 143
           IDTNGNG FRGHLIVNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]

BLAST of CSPI02G02950 vs. ExPASy TrEMBL
Match: A0A6J1G2U1 (pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC111450306 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.1e-72
Identity = 131/142 (92.25%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M K SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 143
           IDTNGNG FRGHLIVNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]

BLAST of CSPI02G02950 vs. NCBI nr
Match: XP_004139239.1 (pathogenesis-related protein PR-4 [Cucumis sativus] >KGN60804.1 hypothetical protein Csa_019369 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 8.0e-78
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL
Sbjct: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR
Sbjct: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 143
           IDTNGNGN RGHLIVNYQFVNC
Sbjct: 121 IDTNGNGNLRGHLIVNYQFVNC 142

[Close]

BLAST of CSPI02G02950 vs. NCBI nr
Match: XP_008456018.1 (PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo] >KAA0063603.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa] >TYK18424.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 294.3 bits (752), Expect = 5.8e-76
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M KGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRR+YGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 143
           IDTNGNGNFRGHL VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]

BLAST of CSPI02G02950 vs. NCBI nr
Match: XP_022999102.1 (pathogenesis-related protein PR-4-like [Cucurbita maxima] >XP_023521168.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo] >XP_023547311.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.2 bits (718), Expect = 5.0e-72
Identity = 130/142 (91.55%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M KGS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 143
           IDTNGNG FRGHLIVNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]

BLAST of CSPI02G02950 vs. NCBI nr
Match: XP_022946136.1 (pathogenesis-related protein PR-4-like [Cucurbita moschata])

HSP 1 Score: 279.6 bits (714), Expect = 1.5e-71
Identity = 131/142 (92.25%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M K SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 143
           IDTNGNG FRGHLIVNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]

BLAST of CSPI02G02950 vs. NCBI nr
Match: KAG6599312.1 (hypothetical protein SDJN03_09090, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276.9 bits (707), Expect = 9.5e-71
Identity = 129/142 (90.85%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M K S +MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MEKVSFLMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETG+SEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGSSEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGNFRGHLIVNYQFVNC 143
           IDTNGNG FRGHLIVNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]

BLAST of CSPI02G02950 vs. TAIR 10
Match: AT3G04720.1 (pathogenesis-related 4 )

HSP 1 Score: 188.3 bits (477), Expect = 4.1e-48
Identity = 81/120 (67.50%), Postives = 96/120 (80.00%), Query Frame = 0


Query: 23  QSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDS 82
           +SA+NVRATYH YNP   NWD    S +C+TWDADKP  WR +YGWTAFCGP GPRG+ S
Sbjct: 72  ESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQAS 131

Query: 83  CGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC 142
           CG+CLRV NT T A+  VRIVDQC+NGGLDLDV +F +IDT+G G  +GHLIV+YQFV+C
Sbjct: 132 CGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDC 191

The following BLAST results are available for this feature:

BLAST of CSPI02G02950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29063	1.1e-56	71.53	Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P32045	1.1e-56	77.95	Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P29062	1.8e-56	71.53	Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P09761	9.0e-56	77.31	Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1	[more]
P09762	1.9e-53	74.79	Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1	[more]

BLAST of CSPI02G02950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIC8	3.9e-78	99.30	Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010390 PE=4...	[more]
A0A5D3D4G8	2.8e-76	97.18	Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3C3H6	2.8e-76	97.18	pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496070 P...	[more]
A0A6J1K9X1	2.4e-72	91.55	pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC1114935...	[more]
A0A6J1G2U1	7.1e-72	92.25	pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of CSPI02G02950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139239.1	8.0e-78	99.30	pathogenesis-related protein PR-4 [Cucumis sativus] >KGN60804.1 hypothetical pro...	[more]
XP_008456018.1	5.8e-76	97.18	PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo] >KAA0063603.1 p...	[more]
XP_022999102.1	5.0e-72	91.55	pathogenesis-related protein PR-4-like [Cucurbita maxima] >XP_023521168.1 pathog...	[more]
XP_022946136.1	1.5e-71	92.25	pathogenesis-related protein PR-4-like [Cucurbita moschata]	[more]
KAG6599312.1	9.5e-71	90.85	hypothetical protein SDJN03_09090, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CSPI02G02950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04720.1	4.1e-48	67.50	pathogenesis-related 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001153	Barwin domain	PRINTS	PR00602	BARWIN	coord: 58..76 score: 78.95 coord: 77..95 score: 71.58 coord: 96..114 score: 77.19 coord: 117..141 score: 67.2
IPR001153	Barwin domain	PFAM	PF00967	Barwin	coord: 24..142 e-value: 6.3E-57 score: 190.6
IPR001153	Barwin domain	PROSITE	PS51174	BARWIN_3	coord: 23..142 score: 79.33255
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 23..142 e-value: 7.3E-55 score: 186.0
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 23..142
IPR044301	Pathogenesis-related protein-4	PANTHER	PTHR46351	WOUND-INDUCED PROTEIN WIN2	coord: 7..142
IPR018226	Barwin, conserved site	PROSITE	PS00772	BARWIN_2	coord: 135..142
IPR018226	Barwin, conserved site	PROSITE	PS00771	BARWIN_1	coord: 83..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G02950.1	CSPI02G02950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0090501	RNA phosphodiester bond hydrolysis
biological_process	GO:0006952	defense response
molecular_function	GO:0004540	ribonuclease activity