CSPI02G02710 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G02710
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	GRF1-interacting factor 1
Location	Chr2: 1889457 .. 1894423 (+)
RNA-Seq Expression	CSPI02G02710
Synteny	CSPI02G02710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAACAGATTCAAACAAAAATTGGATTGTCTCTCTCATCATCACTCACGTGACACCCTTTTTCCCCCTAGAGAGAGAGAGAAGCCAAAAGGAAAAGGAAAAAAAAAAAAAAAAAGACGAAGCTTTTGCTCTGTTCCTTAGGGAGGGAAACAAGTAGCATCTTTGTATAGAGAAAACAGAGAAGAGAGAGAGAGAGAGACGAAACGCTTCTGTTGGCCACATTACAAAGCCAAAACGGCTGCACCCACCACCAGAAAATTCCTCAAAAACCAAAAACCAAAACCCCCTTTTCCTCTCTTTCTCTCACATAAAAACAGAGTTTGGTTGTGTGTATAATCTGCAGAAGCTGCTACACCTCTCTCTCTGTGTCACTATCACCGTCCAACGCCACTCTATTTCAAACCAACGAAGAACATAAATTTTAAAACAAAAGAAAAAAAAAAAAAGAGGAAAAAACATCCTCAAAAGCAAAGAGCATCTTGAATCAGCCGTTTCTGTGAAAAAACTCATCATTCATATTTCACAAATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATTCCAACAACGTCACTACTGATCACATTCAACAGGTTATTCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTTTTTAGTCTATTTATCTTATTAATCCAACCCCATTTCCAGGTTTTTTTTCTTTCATTTCCCCTCTTTTTTTCAACTGGGGTTTCTTTGTTTTTCAACTTAGGGATGATTGTTTTTCTTCCCTTTTCTACTTTTTCTTCCTTTTTTAAGTTTTGGGTTTGTTTAGTTTTGCTTTCTTTCACGTGCCTTTGTCTCTATTTAATGGATTTTCGTTTTCTATTTACAGAAGCTGAGACCAATACATCTATGGCTATCCTTGTTTATTTTCATCTCTTTTCTTGATTAAAGTTAATGACTGTGTTTCTTTTAATTGCATGATTGATTTCTGCCTTTTTGTCTTAATCTTAATAGAAAAGAAAAATGAACTGGTTGGATAGTGACCTTTTTTTTAATGTTTTCCCCCCCTCTCTATCAATGAAGTGGAGAAAAAGTGATTTGTTGGGATATAAAACTGTTGAGAGCCTGAGCTTGAGCTTGAGCTTGATATTTATATGCTTTAAATATCTTAGATTAAGTGGCTTTTTGGGTAGTCTTCTTGTTCAAAAACTAAAATTAGAAGAAAAAAAAAAAAAGAGAAAAAGGTAGCTTATTGGTAATGTTTGTATGTGAAACAGTTAAAAGCTTGAGCCCTTTGTGGTTTGCAAGTTTATTAGTTCTTATATCAATTAGTATTTTATTCCTTTTTTCTGCTTTTTGTAATGTTATTGTTTTACATTGACATAAGCATGTTGGAATTTTAAATCTCATTTCAATGCTTTGTATCTTAACTTGTTGAGGTGAATGTATCATATACAAGTCCTTGAATGTGTTTTCTAAGGTCTGTTATATCATGACTCGGTTTTTGGGGTTCGATCAAATATTCTCATAAACCCTCCTATATTCAAACTCAATGGCTTTATTGAGAATCAAATGTTAATAGGTTTAAGTTGGAGATTAGCCGAGGGGCAGCGTAAGTTGGCTGATATTTTAAGAATAAAAGATTCTTTTATCTTTTAATTAGCTCCTTTTTAGAGAGAAAAACGGTGTGACTTGATAAGTTGAAAAATATTCATGTGCTAAAGTATTAAAAGGATGGGGGTAATGCAAATCTTTTTTAACTTGACACTTCTTGTTATGACTTTTTTAAATCTATATAAGTAGAGAAGTTAAAAGTGTTTTAATATTATCGTATTATGACGCTAAGATGGAAGAGGGAAGCTTGAATAGTGATTGGTCAATCATGAAACAGTATTTTAAGTTGCTGTCTAGTTATGATTCTCCTGAGTTGCTTACAAGGATCATACACTTCAGCACTTGCTTTTTATGGTTTATTATGTCTGATCAATCAAATCTAACAATATATGTTATATGTACTTGGTCGGTTCTGCATAAATTTAGGAGTTTCAATCTGTTATTTTTTTGTGTGTCCAAAACAAGCTATTCTTTTTCAAGAATGACTTGTTAAACTAGTTAAATATGTTCATTTTCTTTCAAAACTGCCTTGTAGTTCGATTCTTTTTCCTTTTCCTTTCTTCTTATTCTACAAACACCAATACTATAGTCATTTAATTTTTGGCAACTTCTTGACGCGATATATTAATAGTTGTCTAACTTATTATTTGATAATCTACGTTGCAGTATTTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCAGGAAAATTGAATGAATGTGCAGAGTAAGAATTTATGCTTTCCCTAATGATTCTACTTATCATACATGATTGCTATTGCTCTCATTCATTGTCATTTTTTTTACATGGTCGTGACTTTCATTGCATTCGTTCCAAATTATCCTCTCTGGCTCTCCCTACGTATTTTTGCTCTCTCTCTCTTTTTGTATATTTGGCTGCGGCTGTAATGGTCCAAGAAAGGATATACTATATAGTATAGCTGAATCGTTGCATTACATCACTCTTTAAGTAACTGTCTTAATTTGAATTTTCTTTTTCAGTTTAATATAATGGGTTTTAGGATGAAGAAGCATGGATTTCGATATTTATCCTTGGGAAAGTCATGTTATATAGTTCTGTTTAAACAAAGTTTTGCTGGGAATTAAAACAGGGTTCTTTTGGAGGCTTTTGTTAGGATCCCACCTAACAAGAATTATCTCAAGAACAATGGATGAACTCAAGAATAGTTAAAGAACAAACAAATATAAAAATATATGAAATATATTCTAGAATATCATAAGAACAAGTAACAAAGTAGCCTTGGCCTTTCGAGAGGGCTAGACTCTCCCAAGGTACCCTTTCAAGGAAATCCCTTTACAAAATTCTTAACACCTCTCCCCAACCTCTCTTCTATTATTTATAACAAAATGACCTAACTAACTTTCTAACTATTTGCTAATATGCCCCCACTAATAGCCACGTTCATTTTCTATGAATAATCTACTTCCTTTGGTAATAATCCTCCCTGATATTACTGCTAAGGTCACTTTCTCTTTCTGCTTGATCATTTTGATATTTGATTCATATTCATGTTGATCACAGTTTCCACTTGAGTAACAACTATTCATGGATGAAAAGTGGAATGATATCTAAGTATCTAACCATTCACCAAATATTCGATTTTGATACAGACGTTGGGAAAACAAAACACTGTCATAGAATTTTCTTGAAAAGAAACCCGAAAATGAAAATATATGGCTTGGTTGTTAAAGTAGGCCTGTAGGCGTATGCCCAAGTAGTATGCACTTAATACTCTTCCATAAATGAGTGGAATAATGCCAAGTTTCTTCGATGATATTGACTTTGGTCACAAGCTTCTGAGGCTGACAATAGGGATTTGATTCATGTTGTTTAATTATCTTGTATTTCTAGACTTCATCAAATGACACAGTTAGTAGTTGAAGCGCAAAACTTACTCTCTCACCTTTTTTCTGTGCAGGAATCAAGCTAGGCTACAGAGAAACCTCATGTACTTGGCTGCCATTGCGGATTCTCAACCTCAACCTTCTGCGATGCATGCCCAGGTATGGACATAATTGTTTCAAGATGTAAATTTATCCAATCACCTGCCAGGCATAGTTATAGAAAACCCATTCCGATTCCGTTAGATCAACACCCTGATTGCTTTCGCCTTAAGAATCATTTTCATTACATCCATTTTCTGCAACACTCTACGACTTTGGCCACAATTGCCCCTTGGAACTTGAGTTCTTCTAGGCCCTAATCCTCTGGATTTGTTTAGCCTACTTGATAATAAGGATTTTAAGTTATTTAAGTTATAGATTTAGGTGCTTTATCCTTTTCTTATTATTATTTTTTTTTTGTTTCTTTCCTTTTTTCTCCTTCAAACTAAATGGAATTGAAATTAATCTATAAGATGATTTGCTATTGTCATGTTCTCTTCAGTACTCTTCCAGTGGCATGATCCAACCAGGAGGGCATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCACAATCGCTGATGGCCGCCCGATCCTCTATGTTGTACTCCCAGCAGCCATTTTCAACACTGCAGCAGCAAGCTTTGCACGGCCAACTCGGTATGAGCTCTGGAGGAGGCATAGGATTCAACATGCTGCAAAACGATGCTGCCAATGCAGGAGGAGGCAATGGAGGAGCACTTGGAGGAGGAGGCTTCCCAGATTTCGGCCACGGTGCTGCAAGTGACAGCTTGCACCGTAGCCTAGCTGGTGGGAGCAAGCAAGACATGGGAGGAACTGGGTCTGCAGAGGGACGAGGTGGGAGCTCAGGGAGCCATGGTGGTGATGGAGGCGAGACTCTGTACTTGAAATCAGCTGATGATGGGAACTGATCAAAGTATGAGGAGAAAAAAAGATAAGTGTTGGGGTGTTCAGTGAGTTGATGGTAGAAAAGTAGGCACAATAGAAATTAGGAAGATAAAAGAAGAGAAGAAACCCTTCTTACTTGAAAAAAAAAAAGAAGCACTTGCTTTTTATCTTATGTGTAAACAATGGTGTGAGGATTCAAACCTCATAAAACTTCGACCTTTGGGTGTCCTTTTTCCATGTTAAAATATGTGCTTGTAGTGTATTATGTAAAGTTTCTTCTCTTGTTCTGTGCTA

mRNA sequence

AGAAAACAGATTCAAACAAAAATTGGATTGTCTCTCTCATCATCACTCACGTGACACCCTTTTTCCCCCTAGAGAGAGAGAGAAGCCAAAAGGAAAAGGAAAAAAAAAAAAAAAAAGACGAAGCTTTTGCTCTGTTCCTTAGGGAGGGAAACAAGTAGCATCTTTGTATAGAGAAAACAGAGAAGAGAGAGAGAGAGAGACGAAACGCTTCTGTTGGCCACATTACAAAGCCAAAACGGCTGCACCCACCACCAGAAAATTCCTCAAAAACCAAAAACCAAAACCCCCTTTTCCTCTCTTTCTCTCACATAAAAACAGAGTTTGGTTGTGTGTATAATCTGCAGAAGCTGCTACACCTCTCTCTCTGTGTCACTATCACCGTCCAACGCCACTCTATTTCAAACCAACGAAGAACATAAATTTTAAAACAAAAGAAAAAAAAAAAAAGAGGAAAAAACATCCTCAAAAGCAAAGAGCATCTTGAATCAGCCGTTTCTGTGAAAAAACTCATCATTCATATTTCACAAATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATTCCAACAACGTCACTACTGATCACATTCAACAGTATTTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCAGGAAAATTGAATGAATGTGCAGAGAATCAAGCTAGGCTACAGAGAAACCTCATGTACTTGGCTGCCATTGCGGATTCTCAACCTCAACCTTCTGCGATGCATGCCCAGTACTCTTCCAGTGGCATGATCCAACCAGGAGGGCATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCACAATCGCTGATGGCCGCCCGATCCTCTATGTTGTACTCCCAGCAGCCATTTTCAACACTGCAGCAGCAAGCTTTGCACGGCCAACTCGGTATGAGCTCTGGAGGAGGCATAGGATTCAACATGCTGCAAAACGATGCTGCCAATGCAGGAGGAGGCAATGGAGGAGCACTTGGAGGAGGAGGCTTCCCAGATTTCGGCCACGGTGCTGCAAGTGACAGCTTGCACCGTAGCCTAGCTGGTGGGAGCAAGCAAGACATGGGAGGAACTGGGTCTGCAGAGGGACGAGGTGGGAGCTCAGGGAGCCATGGTGGTGATGGAGGCGAGACTCTGTACTTGAAATCAGCTGATGATGGGAACTGATCAAAGTATGAGGAGAAAAAAAGATAAGTGTTGGGGTGTTCAGTGAGTTGATGGTAGAAAAGTAGGCACAATAGAAATTAGGAAGATAAAAGAAGAGAAGAAACCCTTCTTACTTGAAAAAAAAAAAGAAGCACTTGCTTTTTATCTTATGTGTAAACAATGGTGTGAGGATTCAAACCTCATAAAACTTCGACCTTTGGGTGTCCTTTTTCCATGTTAAAATATGTGCTTGTAGTGTATTATGTAAAGTTTCTTCTCTTGTTCTGTGCTA

Coding sequence (CDS)

ATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATTCCAACAACGTCACTACTGATCACATTCAACAGTATTTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCAGGAAAATTGAATGAATGTGCAGAGAATCAAGCTAGGCTACAGAGAAACCTCATGTACTTGGCTGCCATTGCGGATTCTCAACCTCAACCTTCTGCGATGCATGCCCAGTACTCTTCCAGTGGCATGATCCAACCAGGAGGGCATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCACAATCGCTGATGGCCGCCCGATCCTCTATGTTGTACTCCCAGCAGCCATTTTCAACACTGCAGCAGCAAGCTTTGCACGGCCAACTCGGTATGAGCTCTGGAGGAGGCATAGGATTCAACATGCTGCAAAACGATGCTGCCAATGCAGGAGGAGGCAATGGAGGAGCACTTGGAGGAGGAGGCTTCCCAGATTTCGGCCACGGTGCTGCAAGTGACAGCTTGCACCGTAGCCTAGCTGGTGGGAGCAAGCAAGACATGGGAGGAACTGGGTCTGCAGAGGGACGAGGTGGGAGCTCAGGGAGCCATGGTGGTGATGGAGGCGAGACTCTGTACTTGAAATCAGCTGATGATGGGAACTGA

Protein sequence

MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN*

Homology

[Close]

BLAST of CSPI02G02710 vs. ExPASy Swiss-Prot
Match: Q8L8A5 (GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.9e-61
Identity = 155/241 (64.32%), Postives = 171/241 (70.95%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMA YY +NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSS--GMIQ--PGGHYIQHQQA---QQMTPQSLMAARS 120
           NLMYLAAIADSQPQP ++H+QY S+  GMIQ   G HY+Q QQA   QQMT QSLMAARS
Sbjct: 61  NLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARS 120

Query: 121 SMLYS-----QQPFSTLQQQAL-HGQLGMSS----GGGIGFNMLQNDAANAGGGNGGALG 180
           SMLY+     QQP++TLQ Q L H QLGMSS    GG  G ++LQ +A            
Sbjct: 121 SMLYAQQQQQQQPYATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGEA------------ 180

Query: 181 GGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDG 225
            GGF DFG G              K +MG  G  EGRGGSS    GDGGETLYLKS+DDG
Sbjct: 181 -GGFHDFGRG--------------KPEMGSGGGGEGRGGSS----GDGGETLYLKSSDDG 210

[Close]

BLAST of CSPI02G02710 vs. ExPASy Swiss-Prot
Match: Q6AVI1 (GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.3e-40
Identity = 126/236 (53.39%), Postives = 149/236 (63.14%), Query Frame = 0


Query: 2   QQHLMQM-QPMMAAYYS-NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQ 61
           QQHLMQM Q MM  Y S   VTTD IQQYLDENK LIL I+++QN+GK+ ECA NQA+LQ
Sbjct: 3   QQHLMQMNQGMMGGYASPTTVTTDLIQQYLDENKQLILAILDNQNNGKVEECARNQAKLQ 62

Query: 62  RNLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQ 121
            NLMYLAAIADSQP  +A  +QY S+ M+Q G  Y+  Q AQ M PQSLMAARSSM+Y+Q
Sbjct: 63  HNLMYLAAIADSQPPQTAAMSQYPSNLMMQSGARYMPQQSAQMMAPQSLMAARSSMMYAQ 122

Query: 122 QPFSTLQQQ------ALHGQLGMSSGGGI-GFNMLQNDAANAGGGNGGALG-----GGGF 181
              S LQQQ      A HGQLGM SGG   GF++L  +A+  GGG GG  G      G F
Sbjct: 123 PALSPLQQQQQQQAAAAHGQLGMGSGGTTSGFSILHGEASMGGGGGGGGAGNSMMNAGVF 182

Query: 182 PDFGHGAASDSLHRSLAGGSKQDMGGTG-SAEGRGGSSGSHGGDGGETLYLKSADD 223
            DFG G           GG K+  G T  S + RG +SG+  GDG    YLK  ++
Sbjct: 183 SDFGRGG---------GGGGKE--GSTSLSVDVRGANSGAQSGDGE---YLKGTEE 224

[Close]

BLAST of CSPI02G02710 vs. ExPASy Swiss-Prot
Match: A5HEH4 (GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.5e-36
Identity = 121/238 (50.84%), Postives = 146/238 (61.34%), Query Frame = 0


Query: 2   QQHLMQM-QPMMAAYYS-NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQ 61
           QQHLMQM Q MM  Y S   VTTD IQQYLDENK LIL I+++QN+GK  EC  +QA+LQ
Sbjct: 3   QQHLMQMNQNMMGGYTSPAAVTTDLIQQYLDENKQLILAILDNQNNGKAEECERHQAKLQ 62

Query: 62  RNLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQ 121
            NLMYLAAIADSQP  +A  +QY S+ M+QPG  Y+  Q  Q M PQSLMAARSSM+Y+ 
Sbjct: 63  HNLMYLAAIADSQPPQTAPLSQYPSNLMMQPGPRYMPPQSGQMMNPQSLMAARSSMMYAH 122

Query: 122 QPFSTL-QQQALHGQLGMSSGGG-----IGFNMLQNDAANAGGGNGGALG-----GGGFP 181
              S L QQQA HGQLGM+ GGG      GF++L  +A+  GGG G   G      G F 
Sbjct: 123 PSLSPLQQQQAAHGQLGMAPGGGGGGTTSGFSILHGEASMGGGGAGAGAGNNMMNAGMFS 182

Query: 182 DFGHGAASDSLHRSLAGGSKQDMGGTG-SAEGRGG-SSGSHGGDGGETLYLKSADDGN 225
            FG              GS    G T  S + RGG SSG+  GD GE L + + ++G+
Sbjct: 183 GFGR------------SGSGAKEGSTSLSVDVRGGTSSGAQSGD-GEYLKVGTEEEGS 227

[Close]

BLAST of CSPI02G02710 vs. ExPASy Swiss-Prot
Match: Q93VH6 (GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.0e-17
Identity = 91/240 (37.92%), Postives = 120/240 (50.00%), Query Frame = 0


Query: 3   QHLMQMQPMMAAYY--SNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 62
           Q   QM PM+   +  +NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 2   QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQK 61

Query: 63  NLMYLAAIADSQPQP-------SAMHAQY---SSSGMIQPGGHYIQHQQA---QQMTPQS 122
           NLMYLAAIAD+QPQP        AM  Q    + S M  P  +++Q  QA    Q  P  
Sbjct: 62  NLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPPG 121

Query: 123 LMAARSSMLYSQ-----QPFSTLQQQALHGQLGMSSGGGIGFNMLQND--------AANA 182
           +   R  + +        P   L QQA+ G +G+   G    N LQ+         AAN 
Sbjct: 122 IFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNNNGLQHQMHHHETALAANN 181

Query: 183 GGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGET 215
            G N  +  GGG PD                G+     G   A+G+GGS+  HGG   +T
Sbjct: 182 AGPNDAS--GGGKPD----------------GTNMSQSG---ADGQGGSAARHGGGDAKT 220

[Close]

BLAST of CSPI02G02710 vs. ExPASy Swiss-Prot
Match: Q9MAL9 (GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.4e-17
Identity = 80/195 (41.03%), Postives = 111/195 (56.92%), Query Frame = 0


Query: 2   QQHLMQMQPMMAAY-YSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 61
           QQ   QM PM+ +   +NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQK 62

Query: 62  NLMYLAAIADSQPQP--------SAMHAQYSS--SGMIQPGGHYIQHQQAQQMTPQSLMA 121
           NLMYLAAIAD+QP P        +A+ AQ ++  SGM QP  +++QH QA   +P  + A
Sbjct: 63  NLMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGM-QPPSYFMQHPQA---SPAGIFA 122

Query: 122 ARSSMLYSQ-------QPFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALG 178
            R  + +         Q    + QQA+ G +G+    G+  N +Q+       G GG +G
Sbjct: 123 PRGPLQFGSPLQFQDPQQQQQIHQQAMQGHMGIRP-MGMTNNGMQHAMQQPETGLGGNVG 182

[Close]

BLAST of CSPI02G02710 vs. ExPASy TrEMBL
Match: A0A0A0LL92 (SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010170 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.6e-113
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180
           PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of CSPI02G02710 vs. ExPASy TrEMBL
Match: A0A1S3C305 (GRF1-interacting factor 1 OS=Cucumis melo OX=3656 GN=LOC103496282 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 7.7e-113
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180
           PFSTLQQQALHGQLGMSSGGGIGFNMLQNDA NAGGGNGGALGGGGFPDFGHGAASDSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAGNAGGGNGGALGGGGFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of CSPI02G02710 vs. ExPASy TrEMBL
Match: A0A6J1HQC1 (GRF1-interacting factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111465656 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.3e-107
Identity = 214/224 (95.54%), Postives = 218/224 (97.32%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180
           PFS+LQQQALH QLGMSSGGGIGFNMLQNDAANA GGNGGALGGGGFPDF H AA+DSLH
Sbjct: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANA-GGNGGALGGGGFPDFSHNAAADSLH 180

Query: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           RSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 223

[Close]

BLAST of CSPI02G02710 vs. ExPASy TrEMBL
Match: A0A6J1FCK8 (GRF1-interacting factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444175 PE=3 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.5e-105
Identity = 214/225 (95.11%), Postives = 218/225 (96.89%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGAL-GGGGFPDFGHGAASDSL 180
           PFS+LQQQALH QLGMSSGGGIGFNMLQNDAANA GGNGGAL GGGGFPDF H AA+DSL
Sbjct: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANA-GGNGGALGGGGGFPDFSHNAAADSL 180

Query: 181 HRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           HRSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 HRSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of CSPI02G02710 vs. ExPASy TrEMBL
Match: A0A6J1CPL3 (GRF1-interacting factor 1 OS=Momordica charantia OX=3673 GN=LOC111013134 PE=3 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.9e-103
Identity = 208/225 (92.44%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQ 120

Query: 121 PFSTL-QQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSL 180
            FS L QQQALH QLGMSSGGGIGFNMLQND +NAGGGNGGALG GGFPDFGH AA DSL
Sbjct: 121 QFSALQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSL 180

Query: 181 HRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           HR LAGGSKQDMG TGSAEGRGGSSGSHGGDGGETLYLK+ADDGN
Sbjct: 181 HRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDGN 225

[Close]

BLAST of CSPI02G02710 vs. NCBI nr
Match: XP_004139249.1 (GRF1-interacting factor 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 417.9 bits (1073), Expect = 5.4e-113
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180
           PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of CSPI02G02710 vs. NCBI nr
Match: XP_008456296.1 (PREDICTED: GRF1-interacting factor 1 [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 1.6e-112
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180
           PFSTLQQQALHGQLGMSSGGGIGFNMLQNDA NAGGGNGGALGGGGFPDFGHGAASDSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAGNAGGGNGGALGGGGFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of CSPI02G02710 vs. NCBI nr
Match: KAE8651552.1 (hypothetical protein Csa_019498 [Cucumis sativus])

HSP 1 Score: 409.1 bits (1050), Expect = 2.5e-110
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 6   MQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYL 65
           MQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYL
Sbjct: 1   MQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYL 60

Query: 66  AAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTL 125
           AAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTL
Sbjct: 61  AAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTL 120

Query: 126 QQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLAG 185
           QQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLAG
Sbjct: 121 QQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLAG 180

Query: 186 GSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           GSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 GSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 219

[Close]

BLAST of CSPI02G02710 vs. NCBI nr
Match: XP_031737190.1 (GRF1-interacting factor 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 401.7 bits (1031), Expect = 4.0e-108
Identity = 224/255 (87.84%), Postives = 224/255 (87.84%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQ-------------------------------QYL 60
           MQQHLMQMQPMMAAYYSNNVTTDHIQ                               QYL
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQVILLFLLLLLLLLLLLPFFSLFILLIQPHFQYL 60

Query: 61  DENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGMIQ 120
           DENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGMIQ
Sbjct: 61  DENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGMIQ 120

Query: 121 PGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNMLQN 180
           PGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNMLQN
Sbjct: 121 PGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMSSGGGIGFNMLQN 180

Query: 181 DAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGG 225
           DAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGG
Sbjct: 181 DAANAGGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGG 240

[Close]

BLAST of CSPI02G02710 vs. NCBI nr
Match: XP_022965913.1 (GRF1-interacting factor 1-like [Cucurbita maxima])

HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-106
Identity = 214/224 (95.54%), Postives = 218/224 (97.32%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180
           PFS+LQQQALH QLGMSSGGGIGFNMLQNDAANA GGNGGALGGGGFPDF H AA+DSLH
Sbjct: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANA-GGNGGALGGGGFPDFSHNAAADSLH 180

Query: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           RSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 223

[Close]

BLAST of CSPI02G02710 vs. TAIR 10
Match: AT5G28640.1 (SSXT family protein )

HSP 1 Score: 236.5 bits (602), Expect = 2.1e-62
Identity = 155/241 (64.32%), Postives = 171/241 (70.95%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMA YY +NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSS--GMIQ--PGGHYIQHQQA---QQMTPQSLMAARS 120
           NLMYLAAIADSQPQP ++H+QY S+  GMIQ   G HY+Q QQA   QQMT QSLMAARS
Sbjct: 61  NLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARS 120

Query: 121 SMLYS-----QQPFSTLQQQAL-HGQLGMSS----GGGIGFNMLQNDAANAGGGNGGALG 180
           SMLY+     QQP++TLQ Q L H QLGMSS    GG  G ++LQ +A            
Sbjct: 121 SMLYAQQQQQQQPYATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGEA------------ 180

Query: 181 GGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDG 225
            GGF DFG G              K +MG  G  EGRGGSS    GDGGETLYLKS+DDG
Sbjct: 181 -GGFHDFGRG--------------KPEMGSGGGGEGRGGSS----GDGGETLYLKSSDDG 210

[Close]

BLAST of CSPI02G02710 vs. TAIR 10
Match: AT4G00850.1 (GRF1-interacting factor 3 )

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-18
Identity = 91/240 (37.92%), Postives = 120/240 (50.00%), Query Frame = 0


Query: 3   QHLMQMQPMMAAYY--SNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 62
           Q   QM PM+   +  +NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 2   QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQK 61

Query: 63  NLMYLAAIADSQPQP-------SAMHAQY---SSSGMIQPGGHYIQHQQA---QQMTPQS 122
           NLMYLAAIAD+QPQP        AM  Q    + S M  P  +++Q  QA    Q  P  
Sbjct: 62  NLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPPG 121

Query: 123 LMAARSSMLYSQ-----QPFSTLQQQALHGQLGMSSGGGIGFNMLQND--------AANA 182
           +   R  + +        P   L QQA+ G +G+   G    N LQ+         AAN 
Sbjct: 122 IFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNNNGLQHQMHHHETALAANN 181

Query: 183 GGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGET 215
            G N  +  GGG PD                G+     G   A+G+GGS+  HGG   +T
Sbjct: 182 AGPNDAS--GGGKPD----------------GTNMSQSG---ADGQGGSAARHGGGDAKT 220

[Close]

BLAST of CSPI02G02710 vs. TAIR 10
Match: AT1G01160.1 (GRF1-interacting factor 2 )

HSP 1 Score: 90.1 bits (222), Expect = 2.4e-18
Identity = 80/195 (41.03%), Postives = 111/195 (56.92%), Query Frame = 0


Query: 2   QQHLMQMQPMMAAY-YSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 61
           QQ   QM PM+ +   +NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQK 62

Query: 62  NLMYLAAIADSQPQP--------SAMHAQYSS--SGMIQPGGHYIQHQQAQQMTPQSLMA 121
           NLMYLAAIAD+QP P        +A+ AQ ++  SGM QP  +++QH QA   +P  + A
Sbjct: 63  NLMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGM-QPPSYFMQHPQA---SPAGIFA 122

Query: 122 ARSSMLYSQ-------QPFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALG 178
            R  + +         Q    + QQA+ G +G+    G+  N +Q+       G GG +G
Sbjct: 123 PRGPLQFGSPLQFQDPQQQQQIHQQAMQGHMGIRP-MGMTNNGMQHAMQQPETGLGGNVG 182

[Close]

BLAST of CSPI02G02710 vs. TAIR 10
Match: AT1G01160.2 (GRF1-interacting factor 2 )

HSP 1 Score: 72.8 bits (177), Expect = 4.0e-13
Identity = 80/229 (34.93%), Postives = 111/229 (48.47%), Query Frame = 0


Query: 2   QQHLMQMQPMMAAY-YSNNVTTDHIQQ--------------------------------- 61
           QQ   QM PM+ +   +NN+TT+ IQ+                                 
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWL 62

Query: 62  -YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP--------SAM 121
            YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QP P        +A+
Sbjct: 63  DYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAV 122

Query: 122 HAQYSS--SGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQ-------QPFSTLQQQA 178
            AQ ++  SGM QP  +++QH QA   +P  + A R  + +         Q    + QQA
Sbjct: 123 AAQMATPHSGM-QPPSYFMQHPQA---SPAGIFAPRGPLQFGSPLQFQDPQQQQQIHQQA 182

The following BLAST results are available for this feature:

BLAST of CSPI02G02710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8A5	2.9e-61	64.32	GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1	[more]
Q6AVI1	1.3e-40	53.39	GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 S...	[more]
A5HEH4	9.5e-36	50.84	GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1	[more]
Q93VH6	2.0e-17	37.92	GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1	[more]
Q9MAL9	3.4e-17	41.03	GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1	[more]

BLAST of CSPI02G02710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL92	2.6e-113	100.00	SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010170 PE=3 S...	[more]
A0A1S3C305	7.7e-113	99.55	GRF1-interacting factor 1 OS=Cucumis melo OX=3656 GN=LOC103496282 PE=3 SV=1	[more]
A0A6J1HQC1	6.3e-107	95.54	GRF1-interacting factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111465656 PE=3 ...	[more]
A0A6J1FCK8	1.5e-105	95.11	GRF1-interacting factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444175 PE=...	[more]
A0A6J1CPL3	1.9e-103	92.44	GRF1-interacting factor 1 OS=Momordica charantia OX=3673 GN=LOC111013134 PE=3 SV...	[more]

BLAST of CSPI02G02710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139249.1	5.4e-113	100.00	GRF1-interacting factor 1 isoform X2 [Cucumis sativus]	[more]
XP_008456296.1	1.6e-112	99.55	PREDICTED: GRF1-interacting factor 1 [Cucumis melo]	[more]
KAE8651552.1	2.5e-110	100.00	hypothetical protein Csa_019498 [Cucumis sativus]	[more]
XP_031737190.1	4.0e-108	87.84	GRF1-interacting factor 1 isoform X1 [Cucumis sativus]	[more]
XP_022965913.1	1.3e-106	95.54	GRF1-interacting factor 1-like [Cucurbita maxima]	[more]

BLAST of CSPI02G02710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G28640.1	2.1e-62	64.32	SSXT family protein	[more]
AT4G00850.1	1.4e-18	37.92	GRF1-interacting factor 3	[more]
AT1G01160.1	2.4e-18	41.03	GRF1-interacting factor 2	[more]
AT1G01160.2	4.0e-13	34.93	GRF1-interacting factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007726	SS18, N-terminal	PFAM	PF05030	SSXT	coord: 19..76 e-value: 1.8E-21 score: 75.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..224
None	No IPR available	PANTHER	PTHR23107:SF18	GRF1-INTERACTING FACTOR 1	coord: 1..224
IPR044779	SS18 family	PANTHER	PTHR23107	SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN	coord: 1..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G02710.1	CSPI02G02710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008283	cell population proliferation
biological_process	GO:0048366	leaf development
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0048316	seed development
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003713	transcription coactivator activity