CSPI02G02380 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G02380
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	U5 small nuclear ribonucleoprotein component
Location	Chr2: 1637572 .. 1644691 (+)
RNA-Seq Expression	CSPI02G02380
Synteny	CSPI02G02380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTGGATAGTTTTTCTTAATGGGCTAGGATGTGGCCCATTTATTCTGTCCAAAAGGCCCGATACTAAGATGGGTTATTAGGCCGGATCATTCTTTTTGTAAGCCCAAAACCCGACCCGAATTGGCATCCTATGCACGTGACAAATCAGGCCATACCCTAGCCAGGCCACTGTAAGCTTTTCATTTCGTCTCACCGGCGCCCTCATCGCCGTGTTCCTCTTCTCGCACCGCCACTGCCACCATTCCCGCCCATTTTCACTACTGATTATCACACAGCTTTCTCTACCGTCGTCGGCCGAGAATTTCCGCTTCTCGTCTCCCACAGTTGTCCATCACTGTCCGTCGAGGGAAGGGTATTTAAAACACTTGTTTTAGCTTGTAAGTTTATGTACTTTGTACTTCAATGTAGATTGGTTCTTTTCCTGGTTTCTATCAAGTCTCTTGTTACAAATTCTAGTCTTTCTTTGGCTTTCCATCGTTTCTTTAGAAGAGAAACTACTCCAGTTACTTTTCCCTTCTTTCCTGAAGGATAGAATGAAGAATTCATCGGTTTTTACTTTGTGCTTACCTCGTAAAGGGTACAGCAAAATATTTGTGGGTCAGTGGAGTTTGTTCTTACTTTGGAGTATTTGTTGGGAAGAAACAAAAGAATTTTTAAAGATGAGTTAAATGAACTGGGTAGATGTTTTGGATTTAGTTAGGGTTCTTTCTTCTTCTTCTTCTTCTTATTATTATTAAATTGGATTTTATATGCACTGTTTGTGGCTTTAGCAGTCACTCAAGTATGGCTAAGGGGTGGGTTCTTCTAAGCTCCACTTGGGAGTGACTGATATTGTAGTTATGGCTTAATTGATTTTGTATCAATGGAAAGTGTTTCTTATATAAAAAAACTTATGGGAAGTGTTCTCTCCCTGCTTGTTGTTTATTTCCCTCGCAAATGTAGACAGCAGACATAAGTCCACCCTGTATTTAGTAGCTACATAGAATTCCAAGCCTTTTTAGTTGAATAGATTGTAAAATTAAGCTATTTTCTTATATATTTGCAGCTTTGAGAATACTAAGCATGGATGATAGCTTGTATGATGAATTTGGAAACTACATAGGACCCGAAATTGATTCTGATAAGGATAGTGACATCGAAGATGAAGATGAAGACCTCATGGAGAAGCCTGACGAAGATGAAGGTGTATCGGATGGAGAAGATGCAGGTGGTGCTTCAAATGGTTGGATTACAACGTCTAATGATGTTGATATGGACAACCAGATTGTCCTTGCAGAGGACAAAAAATATTATCCAACTGCAGAAGAGGTTTATGGTGAAGATGTTGAAACATTGGTTATGGATGAAGATGAGCTACCGCTAGAGCAACCAATTATTAAGCCTGTTAGAAATGTAAAATTTGAGGTTGGGGTAAAAGATTCTAGAACATATGTCTCAAATCAATTTCTGGTGGGTCTCATGTCCAATCCAACTTTGGTCCGCAATGTTGCACTTGTAGGCCACGTACATCATGGAAAGACGGTCTTCATGGATATGCTGATTGAGCAAACACATCACATGTCAACATTTGATATTAAAGGAGAGAAACATTTGAGGTACACAGATACTAGGATTGACGAGCAGGAGAGAGGAATATCAATTAAGGCAGTTCCTATGTCACTGGTCCTCGAGGATGGCAATTCAAAATCGTACCTTTGCAATATAATGGACACCCCTGGCCATACCAATTTTTCTGATGAAATGACTGCTGCTCTTAGACTTGCTGATGGTGCAGTGTTGATCGTAGACGCTGCTGAAGGAGTTATGGTAAGTAAATAAATATCATCCTAGTTTTTATTTATATTTTTAGCTTTATATGCTCACTTTTATAATTTTTAGCTTTATATGCTCACTTTTATAATTTTTAGCTTTATATGCTCACTTTTATAATTTTTTCATTGCTGCCAAGCAATTAGAAACTTTCCGTTTTTTATCATCTAAGTGGTTTAAACATCAATTTATATCCCAATTTACTTTTACCTGTGGCCGGGGCACCTCATTTTAGAATTAACCCTCTTCACCTAGGTTTTGGATTCGTGCAATCACTTTACTGCGGAGTGTAACCATTTATTGAGTGTGGGTTGTTCGATATGCCTTGCATGGAGGTTTTTTTTTTTTTTTTTTTTTTAATAATTTTTTTTATTAATATTATTATGGAATTATTGATATTGCTGTTTCATAGAGAGAGCACTGAGGTTGGAATAAATGCATGGTGGCATTAATGAGAATGTATTCTACAATCGACAGGTCAATACAGAGAGGGCTATACGGCATGCAATTCAGGAGCGATTGCCCATTGTTGTTGTAATTAACAAGGTTAGCCTTTTTTATTCTTTTTGAGTTTTCATCAGATTTTTGAAAGTTGGATTCTCCCTCAAACACCACGTGTTAATTTGTATACTGATACATTATTTGTATCTAGGTTGACAGGCTGATTACAGAACTTAAATTGCCTCCAAGGGATGCATACTATAAATTAAGGCATACGTTAGAAATTATTAATAATCATATATCTGCTGCCTCATCTACTGCTGGAAATGTTCAAGTTATTGACCCAGCCGCCGGAAATGTGTGTTTTGCAAGTGCTACTGCAGGATGGTCGTTTACTTTGCAATCGTTTGCAAAGTTATATGTCAAACTTCATGGAATCCCTTTTGATGCTGATAAGTTTGCTACCCGTCTTTGGGGAGATTATTATTATCATCCTGATACCAGAGGATTTAAGAAAAAACAGCCTGCAAGTGGAGGAGAAAGGTCATTTGTTCAATTTGTGCTTGAGCCACTATACAAAATATATAGTCAAGTCATTGGTGAACATAGGAAAAGTGTTGAGACTACTCTTGTGGAGCTTGGTGTTACTCTTAGCAATGCAGCTTACAAGTTGAATGTTAGGCCTTTGCTGAGACTGGCTTGTAGTTCAGTTTTTGGTGGAGCTTCAGGATTCACTGACATGCTTGTTCAGCACATACCTTCTCCCAGGGATGCTTCTTCTCGGAAGGTTGATCATATTTATACCGGGCCTAAAGACTCCATGATTTACAAAGCAATGAAAGAATGTGATCCTTCTGGGCCTTTAATGGTTAACATCACCAAACTATACCCCAAGTCAGACTGCAGTGTATTTGATGCGTTTGGTAGGGTTTATAGTGGTAAGATTCAAACAGGGCAGACTGTACGGGTATTGGGTGAGGGCTATTCACCAGATGATGAGGAAGATATGGTAGTTAAGGAAGTAACAAAATTATGGCTTTATCAAGCTCGAGACAGGGTTCCCATTGCTGAGGCTCCTCCTGGATCTTGGGTTCTCATTGAAGGAGTGGATGCATCTATTATGAAAACTGCAACTCTGTCTAATGTAGATTATGATGAGGATGTTTACATATTCCGACCACTTCAATTCAATACCCTTCCTGTGGTAAAAACAGCTACTGAGCCTCTAAATCCAAGTGAGTTGCCAAAGATGGTAGAGGGTCTTCGGAAGATCAGCAAAAGCTATCCTCTGGCAATCACTAAAGTTGAGGAATCAGGCGAGCATACCATTTTAGGCACGGGAGAGCTGTACTTGGATTCAATTATGAAGGATCTTAGAGAGCTCTACTCGGAAGTAGAAGTCAAGGTATTCTTTTACCCTATTGTCTCACCTTTTGTTTCCAATTTTTTCTTTGTTCTTCTCTGATGGATTTTCCATTCTGTAACCCATCTTATAGGTAGCCGATCCTGTCGTTTCATTTTGTGAAACCGTTGTAGAGTCTTCTTCAATGAAATGTTTTGCTGAGACTCCTAACAAGAAGAATAAAATAACCATGGTAGGCAATTTTCTAACTTGGCTGTTTTAGTTTTTCTGTAGGTTCAAAATACTTGGAATGTGATGTGTTGATTCAAATCATTTTTTTTCTAGATTGCAGAGCCATTGGAGAGAGGACTTGCAGAGGACATTGAGAATGGTGTTGTAAGCCTTGATTGGTCAAGAAAGAAACTTGGAGATTTCTTCCAGACAAAATATGAGTGGGATTTGCTGGCTGCAAGGTCCATATGGGCATTTGGCCCTGATAAGCAGGTAACTTTAGTAGCCGGTTATCTCTTTACCAAAATACATTTCTTCTAAATGGACACAGAATTTGACGCTTTCTTGTGAGAGGATAAAAGTAAAACAGATACTTTGCTCACTGCAGAATTGCAGATTGACTTGATATAGTTTATTGTTAGACTTGTTCTTTTAGTCATCTTTCTGATACTTGGCATTTGGTAACTCCAACTTTAACCATAGTGGTAAGAGATTCAGGGTTCAATGAAGCTGTCATGCATTTCATAAAAAAAGAAGTAGAAATTGTCATATATTAAAATCAATTTCTGCCATCATGATAGGCTAGCATCTTCTATAACTATATATGTGAGATTTTGATAAGCAGCATGTGCTTTGTACTGCAATTTTGTTCTTGATGTTTAAACTTTTAATCAAATTTTAGGGACCTAACATTCTATTAGACGATACGCTCTCTTCTGAAGTAGACAAGAATTTGCTGAATGCCGTCAAGGATTCCATTGTTCAAGGGTAAACTATCTTGATGGCTCTCTCTCTCTCTCTCTCTTTCCTGGTGGAGGAAGGGAACCGGGGGCTTAGCACCCCCAGCCTTTTTTTTTCTTCTCTTTTTGTTTAGTAAATATTTTTTAAATGTTTTAAATTTTATTGCCTTTTTTTCCCCAATGTAAGCCCTTCATATCTTTAACAGGTTTCAATGGGGAGCTCGAGAAGGACCACTTTGTGATGAACCCATTAGGAATGTTAAGTTCAAAATTGTTGATGCTAGAATTGCACCTGAGCCACTGCATCGTGGGTCTGGTCAGATCATTCCCACAGCTCGACGAGTGGCCTATTCGTCTTTTCTTATGGCAACCCCACGACTTATGGAACCAGTATATTATGTTGAGGTAAAATTTTCATCTTTTAATATTTTATGCAGTCAAACATGGGTATAATTATTATTTTCCCTTACTGTTTAGTGGTGATGAGATTTTTAAATTTTTGTCAGGAGACTTTTTTAGTGTGTGTTTGGGGTGTTTTGAGAGGCCGTGTATTAAAATCACTCATAATGGCTTCAACAAAAACTGCTTAATCACTCACTCTTGTTTGGAGGATTGGAGAGGAAATATGTTGAGAGGTATTTCTAAGTGAATTTGTGTGGATAATAAGAAGTGCAAGGAATGTGTGAAACGAAAAGACTATTAAAAATTACCCAAGAGGAAAGTTGTCGAGAACCTATGGAAGGAAGTGAAGGAGACCATGAAGAGTAAAGGTTAGTTGTAAAAGAAAATATGCCCGAGATAAAAATTTGTGAGAGGAAGTGTGGAGAGAAGTGAGGGAGAGTATGTGGAGAGTAGAGGCTATATTTTAAATAAGTGTTTAGTAGAAAATGATTGATAAATAATAATACCAAGAGAATGATTCAAGGAGACTGATAAACACTGTAGGCGGTTTAACTGTTAGTTTTAGGAGAGAGTCTAGAAATCATAATCTCACCATGCGCATTTGGGTGTCGGTGTAGGTAAGGGGAGCGAGCAATCACTATATGATGGGCACAAAATTATTTTTGGTTTGATCCCTCAATCTCACACACAAAAAAAGAATTATTGGCTTCTTTGGAAATCACTTTTGGTGTTTGACTTTTTGTGTAGAGTGCTTCTAAATTGTACCAAACCTAAAACATTTTGTAAACACTACGTGTAACTCGTCTATTGTTGTTTGAGTAAATTTTTTATTATTTCATTGTAGATTCAAACACCCATCGATTGTGTCTCTGCAATCTATACTGTCCTATCCCGAAGGCGTGGACATGTTACAGCTGATGTTGCTCAACCAGGGACTCCAGCTTACATTGTCAAGGTTTAAGGACTAAAATTACACTTTTATCTCAAAATGTTAAGGATCTTGATATTTACTTTCACGATATTGAACTTTTTTCTCCAAACAGTAGCGAAACTGCTTCATTACTGCACTCGATCACTGAATAGTAGTAACAAATTGTTCTCTCATGTCAATATTCCCATGTCCATTTCACTATCCAAGATCTTTGATCTGGACAACGGGGTTTTATTTTCACAAGTAAATTTATAGGATATAAAGGCATGATAGACTCAATTTCTCATGTTTTTTTTACCCGTTGCTACTTGTCAGGCATTTTTACCCGTTATTGAATCTTTTGGCTTTGAGACGGATTTGCGGTATCATACGCAAGGCCAGGCTTTTTGTCTCTCTGTGTTTGACCACTGGGCCATTGTTCCTGGCGATCCCCTTGATAAGAGCATTGTTTTACGGCCTCTTGAGCCAGCACCAATTCAACACCTTGCTCGTGAATTCATGGTGAAGACAAGGCGTAGAAAGGTTAGACCTTCTGCTCATTTTTGTTCTCAATCTTATCACGCATGCTAGGGCGGTTGTATGCTATATACATGCATGGCTTTATAAATGCTCTTTGCACAATAACCGAACTTCAAAATTTGAAGTTTATGCTTGGAATTATACGTTCTTATTTCCCCAAGATGGTTCTGATGCCGTAGTGATTATTATTTTTTTAAACAATAGCTTGACAAAATGACAAACAGAGAGTTCTTGCCTTAATACATTAGCTTTGCTGGGATTTACAGGGAATGAGCGAGGATGTGAGCATAAACAAGTTCTTCGACGAGGCAATGATGGTCGAGCTGGCTCAGCAAGCAGCTGATCTTCATCAACAAATGATATAATTGAAGCTCATCCAAGCAATGTTTGGTCTGATTTGTTGGTGAATCCAAGTGTTGTACCATAGTTATTTCTCTTCACTTCCTCCAATATCCTGCCTCGATTTAACAACCATCATTCTTATATATTAGAAGATAGGCAAGCAGACTGAGATTTGTAGATCTTATTTTCGGAGAATTTTCCTTTGTCTGCTAATTTTGAGGGATTTTGAAGCTGAATACATATTTTAGGAATTTATACTGTAATGTTTAGAGTATGTATGAACCTTGTAATGTGAAAAAAGGAAGGGCATATTTGGTTGCATTTACATGTTTTGAATGGAAATGAAAGAATTAGAATCA

mRNA sequence

ATGAGCTGGATAGTTTTTCTTAATGGGCTAGGATGTGGCCCATTTATTCTGTCCAAAAGGCCCGATACTAAGATGGGCCACTGTAAGCTTTTCATTTCGTCTCACCGGCGCCCTCATCGCCGTGTTCCTCTTCTCGCACCGCCACTGCCACCATTCCCGCCCATTTTCACTACTGATTATCACACAGCTTTCTCTACCGTCGTCGGCCGAGAATTTCCGCTTCTCGTCTCCCACAGTTGTCCATCACTGTCCGTCGAGGGAAGGGTATTTAAAACACTTGTTTTAGCTTCTTTGAGAATACTAAGCATGGATGATAGCTTGTATGATGAATTTGGAAACTACATAGGACCCGAAATTGATTCTGATAAGGATAGTGACATCGAAGATGAAGATGAAGACCTCATGGAGAAGCCTGACGAAGATGAAGGTGTATCGGATGGAGAAGATGCAGGTGGTGCTTCAAATGGTTGGATTACAACGTCTAATGATGTTGATATGGACAACCAGATTGTCCTTGCAGAGGACAAAAAATATTATCCAACTGCAGAAGAGGTTTATGGTGAAGATGTTGAAACATTGGTTATGGATGAAGATGAGCTACCGCTAGAGCAACCAATTATTAAGCCTGTTAGAAATGTAAAATTTGAGGTTGGGGTAAAAGATTCTAGAACATATGTCTCAAATCAATTTCTGGTGGGTCTCATGTCCAATCCAACTTTGGTCCGCAATGTTGCACTTGTAGGCCACGTACATCATGGAAAGACGGTCTTCATGGATATGCTGATTGAGCAAACACATCACATGTCAACATTTGATATTAAAGGAGAGAAACATTTGAGGTACACAGATACTAGGATTGACGAGCAGGAGAGAGGAATATCAATTAAGGCAGTTCCTATGTCACTGGTCCTCGAGGATGGCAATTCAAAATCGTACCTTTGCAATATAATGGACACCCCTGGCCATACCAATTTTTCTGATGAAATGACTGCTGCTCTTAGACTTGCTGATGGTGCAGTGTTGATCGTAGACGCTGCTGAAGGAGTTATGGTCAATACAGAGAGGGCTATACGGCATGCAATTCAGGAGCGATTGCCCATTGTTGTTGTAATTAACAAGGTTGACAGGCTGATTACAGAACTTAAATTGCCTCCAAGGGATGCATACTATAAATTAAGGCATACGTTAGAAATTATTAATAATCATATATCTGCTGCCTCATCTACTGCTGGAAATGTTCAAGTTATTGACCCAGCCGCCGGAAATGTGTGTTTTGCAAGTGCTACTGCAGGATGGTCGTTTACTTTGCAATCGTTTGCAAAGTTATATGTCAAACTTCATGGAATCCCTTTTGATGCTGATAAGTTTGCTACCCGTCTTTGGGGAGATTATTATTATCATCCTGATACCAGAGGATTTAAGAAAAAACAGCCTGCAAGTGGAGGAGAAAGGTCATTTGTTCAATTTGTGCTTGAGCCACTATACAAAATATATAGTCAAGTCATTGGTGAACATAGGAAAAGTGTTGAGACTACTCTTGTGGAGCTTGGTGTTACTCTTAGCAATGCAGCTTACAAGTTGAATGTTAGGCCTTTGCTGAGACTGGCTTGTAGTTCAGTTTTTGGTGGAGCTTCAGGATTCACTGACATGCTTGTTCAGCACATACCTTCTCCCAGGGATGCTTCTTCTCGGAAGGTTGATCATATTTATACCGGGCCTAAAGACTCCATGATTTACAAAGCAATGAAAGAATGTGATCCTTCTGGGCCTTTAATGGTTAACATCACCAAACTATACCCCAAGTCAGACTGCAGTGTATTTGATGCGTTTGGTAGGGTTTATAGTGGTAAGATTCAAACAGGGCAGACTGTACGGGTATTGGGTGAGGGCTATTCACCAGATGATGAGGAAGATATGGTAGTTAAGGAAGTAACAAAATTATGGCTTTATCAAGCTCGAGACAGGGTTCCCATTGCTGAGGCTCCTCCTGGATCTTGGGTTCTCATTGAAGGAGTGGATGCATCTATTATGAAAACTGCAACTCTGTCTAATGTAGATTATGATGAGGATGTTTACATATTCCGACCACTTCAATTCAATACCCTTCCTGTGGTAAAAACAGCTACTGAGCCTCTAAATCCAAGTGAGTTGCCAAAGATGGTAGAGGGTCTTCGGAAGATCAGCAAAAGCTATCCTCTGGCAATCACTAAAGTTGAGGAATCAGGCGAGCATACCATTTTAGGCACGGGAGAGCTGTACTTGGATTCAATTATGAAGGATCTTAGAGAGCTCTACTCGGAAGTAGAAGTCAAGGTAGCCGATCCTGTCGTTTCATTTTGTGAAACCGTTGTAGAGTCTTCTTCAATGAAATGTTTTGCTGAGACTCCTAACAAGAAGAATAAAATAACCATGATTGCAGAGCCATTGGAGAGAGGACTTGCAGAGGACATTGAGAATGGTGTTGTAAGCCTTGATTGGTCAAGAAAGAAACTTGGAGATTTCTTCCAGACAAAATATGAGTGGGATTTGCTGGCTGCAAGGTCCATATGGGCATTTGGCCCTGATAAGCAGGGACCTAACATTCTATTAGACGATACGCTCTCTTCTGAAGTAGACAAGAATTTGCTGAATGCCGTCAAGGATTCCATTGTTCAAGGGTTTCAATGGGGAGCTCGAGAAGGACCACTTTGTGATGAACCCATTAGGAATGTTAAGTTCAAAATTGTTGATGCTAGAATTGCACCTGAGCCACTGCATCGTGGGTCTGGTCAGATCATTCCCACAGCTCGACGAGTGGCCTATTCGTCTTTTCTTATGGCAACCCCACGACTTATGGAACCAGTATATTATGTTGAGATTCAAACACCCATCGATTGTGTCTCTGCAATCTATACTGTCCTATCCCGAAGGCGTGGACATGTTACAGCTGATGTTGCTCAACCAGGGACTCCAGCTTACATTGTCAAGGCATTTTTACCCGTTATTGAATCTTTTGGCTTTGAGACGGATTTGCGGTATCATACGCAAGGCCAGGCTTTTTGTCTCTCTGTGTTTGACCACTGGGCCATTGTTCCTGGCGATCCCCTTGATAAGAGCATTGTTTTACGGCCTCTTGAGCCAGCACCAATTCAACACCTTGCTCGTGAATTCATGGTGAAGACAAGGCGTAGAAAGGGAATGAGCGAGGATGTGAGCATAAACAAGTTCTTCGACGAGGCAATGATGGTCGAGCTGGCTCAGCAAGCAGCTGATCTTCATCAACAAATGATATAATTGAAGCTCATCCAAGCAATGTTTGGTCTGATTTGTTGGTGAATCCAAGTGTTGTACCATAGTTATTTCTCTTCACTTCCTCCAATATCCTGCCTCGATTTAACAACCATCATTCTTATATATTAGAAGATAGGCAAGCAGACTGAGATTTGTAGATCTTATTTTCGGAGAATTTTCCTTTGTCTGCTAATTTTGAGGGATTTTGAAGCTGAATACATATTTTAGGAATTTATACTGTAATGTTTAGAGTATGTATGAACCTTGTAATGTGAAAAAAGGAAGGGCATATTTGGTTGCATTTACATGTTTTGAATGGAAATGAAAGAATTAGAATCA

Coding sequence (CDS)

ATGAGCTGGATAGTTTTTCTTAATGGGCTAGGATGTGGCCCATTTATTCTGTCCAAAAGGCCCGATACTAAGATGGGCCACTGTAAGCTTTTCATTTCGTCTCACCGGCGCCCTCATCGCCGTGTTCCTCTTCTCGCACCGCCACTGCCACCATTCCCGCCCATTTTCACTACTGATTATCACACAGCTTTCTCTACCGTCGTCGGCCGAGAATTTCCGCTTCTCGTCTCCCACAGTTGTCCATCACTGTCCGTCGAGGGAAGGGTATTTAAAACACTTGTTTTAGCTTCTTTGAGAATACTAAGCATGGATGATAGCTTGTATGATGAATTTGGAAACTACATAGGACCCGAAATTGATTCTGATAAGGATAGTGACATCGAAGATGAAGATGAAGACCTCATGGAGAAGCCTGACGAAGATGAAGGTGTATCGGATGGAGAAGATGCAGGTGGTGCTTCAAATGGTTGGATTACAACGTCTAATGATGTTGATATGGACAACCAGATTGTCCTTGCAGAGGACAAAAAATATTATCCAACTGCAGAAGAGGTTTATGGTGAAGATGTTGAAACATTGGTTATGGATGAAGATGAGCTACCGCTAGAGCAACCAATTATTAAGCCTGTTAGAAATGTAAAATTTGAGGTTGGGGTAAAAGATTCTAGAACATATGTCTCAAATCAATTTCTGGTGGGTCTCATGTCCAATCCAACTTTGGTCCGCAATGTTGCACTTGTAGGCCACGTACATCATGGAAAGACGGTCTTCATGGATATGCTGATTGAGCAAACACATCACATGTCAACATTTGATATTAAAGGAGAGAAACATTTGAGGTACACAGATACTAGGATTGACGAGCAGGAGAGAGGAATATCAATTAAGGCAGTTCCTATGTCACTGGTCCTCGAGGATGGCAATTCAAAATCGTACCTTTGCAATATAATGGACACCCCTGGCCATACCAATTTTTCTGATGAAATGACTGCTGCTCTTAGACTTGCTGATGGTGCAGTGTTGATCGTAGACGCTGCTGAAGGAGTTATGGTCAATACAGAGAGGGCTATACGGCATGCAATTCAGGAGCGATTGCCCATTGTTGTTGTAATTAACAAGGTTGACAGGCTGATTACAGAACTTAAATTGCCTCCAAGGGATGCATACTATAAATTAAGGCATACGTTAGAAATTATTAATAATCATATATCTGCTGCCTCATCTACTGCTGGAAATGTTCAAGTTATTGACCCAGCCGCCGGAAATGTGTGTTTTGCAAGTGCTACTGCAGGATGGTCGTTTACTTTGCAATCGTTTGCAAAGTTATATGTCAAACTTCATGGAATCCCTTTTGATGCTGATAAGTTTGCTACCCGTCTTTGGGGAGATTATTATTATCATCCTGATACCAGAGGATTTAAGAAAAAACAGCCTGCAAGTGGAGGAGAAAGGTCATTTGTTCAATTTGTGCTTGAGCCACTATACAAAATATATAGTCAAGTCATTGGTGAACATAGGAAAAGTGTTGAGACTACTCTTGTGGAGCTTGGTGTTACTCTTAGCAATGCAGCTTACAAGTTGAATGTTAGGCCTTTGCTGAGACTGGCTTGTAGTTCAGTTTTTGGTGGAGCTTCAGGATTCACTGACATGCTTGTTCAGCACATACCTTCTCCCAGGGATGCTTCTTCTCGGAAGGTTGATCATATTTATACCGGGCCTAAAGACTCCATGATTTACAAAGCAATGAAAGAATGTGATCCTTCTGGGCCTTTAATGGTTAACATCACCAAACTATACCCCAAGTCAGACTGCAGTGTATTTGATGCGTTTGGTAGGGTTTATAGTGGTAAGATTCAAACAGGGCAGACTGTACGGGTATTGGGTGAGGGCTATTCACCAGATGATGAGGAAGATATGGTAGTTAAGGAAGTAACAAAATTATGGCTTTATCAAGCTCGAGACAGGGTTCCCATTGCTGAGGCTCCTCCTGGATCTTGGGTTCTCATTGAAGGAGTGGATGCATCTATTATGAAAACTGCAACTCTGTCTAATGTAGATTATGATGAGGATGTTTACATATTCCGACCACTTCAATTCAATACCCTTCCTGTGGTAAAAACAGCTACTGAGCCTCTAAATCCAAGTGAGTTGCCAAAGATGGTAGAGGGTCTTCGGAAGATCAGCAAAAGCTATCCTCTGGCAATCACTAAAGTTGAGGAATCAGGCGAGCATACCATTTTAGGCACGGGAGAGCTGTACTTGGATTCAATTATGAAGGATCTTAGAGAGCTCTACTCGGAAGTAGAAGTCAAGGTAGCCGATCCTGTCGTTTCATTTTGTGAAACCGTTGTAGAGTCTTCTTCAATGAAATGTTTTGCTGAGACTCCTAACAAGAAGAATAAAATAACCATGATTGCAGAGCCATTGGAGAGAGGACTTGCAGAGGACATTGAGAATGGTGTTGTAAGCCTTGATTGGTCAAGAAAGAAACTTGGAGATTTCTTCCAGACAAAATATGAGTGGGATTTGCTGGCTGCAAGGTCCATATGGGCATTTGGCCCTGATAAGCAGGGACCTAACATTCTATTAGACGATACGCTCTCTTCTGAAGTAGACAAGAATTTGCTGAATGCCGTCAAGGATTCCATTGTTCAAGGGTTTCAATGGGGAGCTCGAGAAGGACCACTTTGTGATGAACCCATTAGGAATGTTAAGTTCAAAATTGTTGATGCTAGAATTGCACCTGAGCCACTGCATCGTGGGTCTGGTCAGATCATTCCCACAGCTCGACGAGTGGCCTATTCGTCTTTTCTTATGGCAACCCCACGACTTATGGAACCAGTATATTATGTTGAGATTCAAACACCCATCGATTGTGTCTCTGCAATCTATACTGTCCTATCCCGAAGGCGTGGACATGTTACAGCTGATGTTGCTCAACCAGGGACTCCAGCTTACATTGTCAAGGCATTTTTACCCGTTATTGAATCTTTTGGCTTTGAGACGGATTTGCGGTATCATACGCAAGGCCAGGCTTTTTGTCTCTCTGTGTTTGACCACTGGGCCATTGTTCCTGGCGATCCCCTTGATAAGAGCATTGTTTTACGGCCTCTTGAGCCAGCACCAATTCAACACCTTGCTCGTGAATTCATGGTGAAGACAAGGCGTAGAAAGGGAATGAGCGAGGATGTGAGCATAAACAAGTTCTTCGACGAGGCAATGATGGTCGAGCTGGCTCAGCAAGCAGCTGATCTTCATCAACAAATGATATAA

Protein sequence

MSWIVFLNGLGCGPFILSKRPDTKMGHCKLFISSHRRPHRRVPLLAPPLPPFPPIFTTDYHTAFSTVVGREFPLLVSHSCPSLSVEGRVFKTLVLASLRILSMDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSNDVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDSRTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYTDTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLIVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNHISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWGDYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSNAAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAMKECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVKEVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVSLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMMVELAQQAADLHQQMI*

Homology

[Close]

BLAST of CSPI02G02380 vs. ExPASy Swiss-Prot
Match: Q9LNC5 (110 kDa U5 small nuclear ribonucleoprotein component CLO OS=Arabidopsis thaliana OX=3702 GN=CLO PE=1 SV=1)

HSP 1 Score: 1753.0 bits (4539), Expect = 0.0e+00
Identity = 861/988 (87.15%), Postives = 925/988 (93.62%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 162
            M+ SLYDEFGNY+GPEI+SD+DSD E EDEDL +K  E+ G SDGE   G SNGWITT N
Sbjct: 1    MESSLYDEFGNYVGPEIESDRDSDDEVEDEDLQDKHLEENG-SDGEQGPGGSNGWITTIN 60

Query: 163  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS 222
            DV+M+NQIVL EDKKYYPTAEEVYGEDVETLVMDEDE PLEQPIIKPVR+++FEVGVKD 
Sbjct: 61   DVEMENQIVLPEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRDIRFEVGVKDQ 120

Query: 223  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 282
             TYVS QFL+GLMSNP LVRNVALVGH+ HGKTVFMDML+EQTHHMSTF+ K EKH++YT
Sbjct: 121  ATYVSTQFLIGLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYT 180

Query: 283  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 342
            DTR+DEQER ISIKAVPMSLVLED  SKSYLCNIMDTPGH NFSDEMTA+LRLADGAVLI
Sbjct: 181  DTRVDEQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLI 240

Query: 343  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 402
            VDAAEGVMVNTERAIRHAIQ+ LPIVVVINKVDRLITELKLPPRDAYYKLRHT+E+INNH
Sbjct: 241  VDAAEGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVINNH 300

Query: 403  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 462
            ISAAS+TAG++ +IDPAAGNVCFAS TAGWSFTLQSFAK+Y KLHG+  D DKFA+RLWG
Sbjct: 301  ISAASTTAGDLPLIDPAAGNVCFASGTAGWSFTLQSFAKMYAKLHGVAMDVDKFASRLWG 360

Query: 463  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSN 522
            D YYH DTR FK+  P  GGER+FVQF+LEPLYKIYSQVIGEH+KSVETTL ELGVTLSN
Sbjct: 361  DVYYHSDTRVFKRSPPVGGGERAFVQFILEPLYKIYSQVIGEHKKSVETTLAELGVTLSN 420

Query: 523  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 582
            +AYKLNVRPLLRLACSSVFG ASGFTDMLV+HIPSPR+A++RKVDH YTG KDS IY++M
Sbjct: 421  SAYKLNVRPLLRLACSSVFGSASGFTDMLVKHIPSPREAAARKVDHSYTGTKDSPIYESM 480

Query: 583  KECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVK 642
             ECDPSGPLMVN+TKLYPKSD SVFD FGRVYSG++QTGQ+VRVLGEGYSP+DEEDM +K
Sbjct: 481  VECDPSGPLMVNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMTIK 540

Query: 643  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 702
            EVTKLW+YQAR R+P++ APPGSWVLIEGVDASIMKTATL N  YDEDVYIFR LQFNTL
Sbjct: 541  EVTKLWIYQARYRIPVSSAPPGSWVLIEGVDASIMKTATLCNASYDEDVYIFRALQFNTL 600

Query: 703  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 762
            PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660

Query: 763  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 822
            ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPL+RGLAEDIENGVV
Sbjct: 661  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLDRGLAEDIENGVV 720

Query: 823  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 882
            S+DW+RK+LGDFF+TKY+WDLLAARSIWAFGPDKQGPNILLDDTL +EVD+NL+ AVKDS
Sbjct: 721  SIDWNRKQLGDFFRTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDRNLMMAVKDS 780

Query: 883  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 942
            IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQ+IPTARRVAYS+FLMATP
Sbjct: 781  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMATP 840

Query: 943  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1002
            RLMEPVYYVEIQTPIDCV+AIYTVLSRRRGHVT+DV QPGTPAYIVKAFLPVIESFGFET
Sbjct: 841  RLMEPVYYVEIQTPIDCVTAIYTVLSRRRGHVTSDVPQPGTPAYIVKAFLPVIESFGFET 900

Query: 1003 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1062
            DLRYHTQGQAFCLSVFDHWAIVPGDPLDK+I LRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901  DLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGMSE 960

Query: 1063 DVSINKFFDEAMMVELAQQAADLHQQMI 1091
            DVS NKFFDEAMMVELAQQ  DLH QMI
Sbjct: 961  DVSGNKFFDEAMMVELAQQTGDLHLQMI 987

[Close]

BLAST of CSPI02G02380 vs. ExPASy Swiss-Prot
Match: F4JWP9 (109 kDa U5 small nuclear ribonucleoprotein component GFL OS=Arabidopsis thaliana OX=3702 GN=GFL PE=2 SV=1)

HSP 1 Score: 1669.1 bits (4321), Expect = 0.0e+00
Identity = 828/990 (83.64%), Postives = 899/990 (90.81%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 162
            MD SLY E GNYIGPEI+SD+DSD   EDEDL E               G SNGWITT N
Sbjct: 1    MDGSLYGECGNYIGPEIESDRDSDDSVEDEDLQEP--------------GGSNGWITTIN 60

Query: 163  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGV-KD 222
            +   +  IVL EDKKYYP A+EVYGEDVETLVMDEDE  LEQPIIKPVR+++FEVGV KD
Sbjct: 61   E---NQNIVLPEDKKYYPIAKEVYGEDVETLVMDEDEQSLEQPIIKPVRDIRFEVGVIKD 120

Query: 223  -SRTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLR 282
             + TYVS  FL+GLMSNP LVRNVALVGH+ HGKTVFMDML+EQTH MSTF+ + +KH+R
Sbjct: 121  QTTTYVSTLFLIGLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMR 180

Query: 283  YTDTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAV 342
            YTDTR+DEQER ISIKAVPMSLVLED  SKSYLCNIMDTPG+ NFSDEMTA+LRLADGAV
Sbjct: 181  YTDTRVDEQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGNVNFSDEMTASLRLADGAV 240

Query: 343  LIVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIIN 402
             IVDAA+GVMVNTERAIRHAIQ+ LPIVVVINKVDRLITELKLPPRDAYYKLR+T+E+IN
Sbjct: 241  FIVDAAQGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRYTIEVIN 300

Query: 403  NHISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRL 462
            NHISAAS+ A ++ +IDPAAGNVCFAS TAGWSFTLQSFA++Y KLHG+  D DKFA+RL
Sbjct: 301  NHISAASTNAADLPLIDPAAGNVCFASGTAGWSFTLQSFARMYAKLHGVAMDVDKFASRL 360

Query: 463  WGDYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTL 522
            WGD YYHPDTR F    P  GGER+FVQF+LEPLYKIYSQVIGEH+KSVETTL ELGVTL
Sbjct: 361  WGDVYYHPDTRVFNTSPPVGGGERAFVQFILEPLYKIYSQVIGEHKKSVETTLAELGVTL 420

Query: 523  SNAAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYK 582
            SN+AYKLNVRPLLRLACSSVFG ASGFTDMLV+HIPSPR+A++RKVDH YTG KDS IY+
Sbjct: 421  SNSAYKLNVRPLLRLACSSVFGSASGFTDMLVKHIPSPREAAARKVDHSYTGTKDSPIYE 480

Query: 583  AMKECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMV 642
            +M ECDPSGPLMVN+TKLYPKSD SVFD FGRVYSG++QTGQ+VRVLGEGYSP+DEEDM 
Sbjct: 481  SMVECDPSGPLMVNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMT 540

Query: 643  VKEVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFN 702
            +KEVTKLW+YQAR R+P++ APPGSWVLIEGVDASIMKTATL N  YDEDVYIFR L+FN
Sbjct: 541  IKEVTKLWIYQARYRIPVSSAPPGSWVLIEGVDASIMKTATLCNASYDEDVYIFRALKFN 600

Query: 703  TLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKD 762
            TLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSI+KD
Sbjct: 601  TLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIIKD 660

Query: 763  LRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENG 822
            LRELYSEV+VKVADPVVSFCETVVESSSMKCFAETPNKKNK+TMIAEPL+RGLAEDIENG
Sbjct: 661  LRELYSEVQVKVADPVVSFCETVVESSSMKCFAETPNKKNKLTMIAEPLDRGLAEDIENG 720

Query: 823  VVSLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVK 882
            VVS+DW+R +LGDFF+TKY+WDLLAARSIWAFGPDKQG NILLDDTL +EVD+NL+  VK
Sbjct: 721  VVSIDWNRVQLGDFFRTKYDWDLLAARSIWAFGPDKQGTNILLDDTLPTEVDRNLMMGVK 780

Query: 883  DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMA 942
            DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQ+IPTARRVAYS+FLMA
Sbjct: 781  DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMA 840

Query: 943  TPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGF 1002
            TPRLMEPVYYVEIQTPIDCV+AIYTVLSRRRG+VT+DV QPGTPAYIVKAFLPVIESFGF
Sbjct: 841  TPRLMEPVYYVEIQTPIDCVTAIYTVLSRRRGYVTSDVPQPGTPAYIVKAFLPVIESFGF 900

Query: 1003 ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGM 1062
            ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDK+I LRPLEPAPIQHLAREFMVKTRRRKGM
Sbjct: 901  ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGM 960

Query: 1063 SEDVSINKFFDEAMMVELAQQAADLHQQMI 1091
            SEDVS NKFFDEAMMVELAQQ  DLH QMI
Sbjct: 961  SEDVSGNKFFDEAMMVELAQQTGDLHLQMI 973

[Close]

BLAST of CSPI02G02380 vs. ExPASy Swiss-Prot
Match: O08810 (116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1)

HSP 1 Score: 1220.7 bits (3157), Expect = 0.0e+00
Identity = 618/989 (62.49%), Postives = 743/989 (75.13%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSD-IEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTS 162
            MD  LYDEFGNYIGPE+DSD+D D +  E +DL E  DEDE     +D G          
Sbjct: 1    MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEDEDEDE-----DDVG--------EH 60

Query: 163  NDVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKD 222
             D     ++VL EDKKYYPTAEEVYG +VET+V +ED  PL +PIIKPV+  KF +  + 
Sbjct: 61   EDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQT 120

Query: 223  -SRTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLR 282
               T     FL  LM N  L+RNV L GH+HHGKT F+D LIEQTH       + ++ L 
Sbjct: 121  LPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTH--PEIRKRYDQDLC 180

Query: 283  YTDTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAV 342
            YTD    EQERG+ IK+ P+++VL D   KSYL NIMDTPGH NFSDE+TA LR++DG V
Sbjct: 181  YTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVV 240

Query: 343  LIVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIIN 402
            L +DAAEGVM+NTER I+HA+QERL + V INK+DRLI ELKLPP DAYYKLRH ++ +N
Sbjct: 241  LFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVN 300

Query: 403  NHISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRL 462
              IS  S+      ++ P  GNVCF+S+     FTL SFAK+Y    G   +  +FA RL
Sbjct: 301  GLISMYSTDEN--LILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFG-DINYQEFAKRL 360

Query: 463  WGDYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTL 522
            WGD Y++P TR F KK P+S  +RSFV+F+LEPLYKI +QV+G+   S+  TL ELG+ L
Sbjct: 361  WGDIYFNPKTRKFTKKAPSSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHL 420

Query: 523  SNAAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYK 582
            +    KLN+RPLLRL C   FG  +GF DM VQHIPSP+  +  K++H YTG  DS + +
Sbjct: 421  TKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGE 480

Query: 583  AMKECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMV 642
            AM +CDP GPLM + TK+Y   D   F AFGRV SG I  GQ V+VLGE Y+ +DEED  
Sbjct: 481  AMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQ 540

Query: 643  VKEVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFN 702
            +  V +LW+  AR  + +   P G+WVLIEGVD  I+KTAT++    +E+  IFRPL+FN
Sbjct: 541  ICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFN 600

Query: 703  TLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKD 762
            T  V+K A EP+NPSELPKM++GLRK++KSYP   TKVEESGEH ILGTGELYLD +M D
Sbjct: 601  TTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHD 660

Query: 763  LRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENG 822
            LR++YSE+++KVADPVV+FCETVVE+SS+KCFAETPNKKNKITMIAEPLE+GLAEDIEN 
Sbjct: 661  LRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENE 720

Query: 823  VVSLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVK 882
            VV + W+RKKLG+FFQTKY+WDLLAARSIWAFGPD  GPNIL+DDTL SEVDK LL +VK
Sbjct: 721  VVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVK 780

Query: 883  DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMA 942
            DSIVQGFQWG REGPLCDE IRNVKFKI+DA +A EPLHRG GQIIPTARRV YS+FLMA
Sbjct: 781  DSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMA 840

Query: 943  TPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGF 1002
            TPRLMEP Y+VE+Q P DCVSA+YTVL+RRRGHVT D   PG+P Y +KAF+P I+SFGF
Sbjct: 841  TPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGF 900

Query: 1003 ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGM 1062
            ETDLR HTQGQAF LSVF HW IVPGDPLDKSIV+RPLEP P  HLAREFM+KTRRRKG+
Sbjct: 901  ETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGL 960

Query: 1063 SEDVSINKFFDEAMMVELAQQAADLHQQM 1090
            SEDVSI+KFFD+ M++ELA+Q   L+  M
Sbjct: 961  SEDVSISKFFDDPMLLELAKQDVVLNYPM 971

[Close]

BLAST of CSPI02G02380 vs. ExPASy Swiss-Prot
Match: Q15029 (116 kDa U5 small nuclear ribonucleoprotein component OS=Homo sapiens OX=9606 GN=EFTUD2 PE=1 SV=1)

HSP 1 Score: 1220.3 bits (3156), Expect = 0.0e+00
Identity = 616/991 (62.16%), Postives = 742/991 (74.87%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSD---IEDEDEDLMEKPDEDEGVSDGEDAGGASNGWIT 162
            MD  LYDEFGNYIGPE+DSD+D D    E +D D M+  D+D+ V D +D          
Sbjct: 1    MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDDDHPGM----- 60

Query: 163  TSNDVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGV 222
                     ++VL EDKKYYPTAEEVYG +VET+V +ED  PL +PIIKPV+  KF +  
Sbjct: 61   ---------EVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLME 120

Query: 223  KD-SRTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKH 282
            +    T     FL  LM N  L+RNV L GH+HHGKT F+D LIEQTH       + ++ 
Sbjct: 121  QTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTH--PEIRKRYDQD 180

Query: 283  LRYTDTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADG 342
            L YTD    EQERG+ IK+ P+++VL D   KSYL NIMDTPGH NFSDE+TA LR++DG
Sbjct: 181  LCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDG 240

Query: 343  AVLIVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEI 402
             VL +DAAEGVM+NTER I+HA+QERL + V INK+DRLI ELKLPP DAYYKLRH ++ 
Sbjct: 241  VVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDE 300

Query: 403  INNHISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFAT 462
            +N  IS  S+      ++ P  GNVCF+S+     FTL SFAK+Y    G   +  +FA 
Sbjct: 301  VNGLISMYSTDEN--LILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFG-DINYQEFAK 360

Query: 463  RLWGDYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGV 522
            RLWGD Y++P TR F KK P S  +RSFV+F+LEPLYKI +QV+G+   S+  TL ELG+
Sbjct: 361  RLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGI 420

Query: 523  TLSNAAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMI 582
             L+    KLN+RPLLRL C   FG  +GF DM VQHIPSP+  +  K++H YTG  DS +
Sbjct: 421  HLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDL 480

Query: 583  YKAMKECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEED 642
             +AM +CDP GPLM + TK+Y   D   F AFGRV SG I  GQ V+VLGE Y+ +DEED
Sbjct: 481  GEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEED 540

Query: 643  MVVKEVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQ 702
              +  V +LW+  AR  + +   P G+WVLIEGVD  I+KTAT++    +E+  IFRPL+
Sbjct: 541  SQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLK 600

Query: 703  FNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIM 762
            FNT  V+K A EP+NPSELPKM++GLRK++KSYP   TKVEESGEH ILGTGELYLD +M
Sbjct: 601  FNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVM 660

Query: 763  KDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIE 822
             DLR++YSE+++KVADPVV+FCETVVE+SS+KCFAETPNKKNKITMIAEPLE+GLAEDIE
Sbjct: 661  HDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIE 720

Query: 823  NGVVSLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNA 882
            N VV + W+RKKLG+FFQTKY+WDLLAARSIWAFGPD  GPNIL+DDTL SEVDK LL +
Sbjct: 721  NEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGS 780

Query: 883  VKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFL 942
            VKDSIVQGFQWG REGPLCDE IRNVKFKI+DA +A EPLHRG GQIIPTARRV YS+FL
Sbjct: 781  VKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFL 840

Query: 943  MATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESF 1002
            MATPRLMEP Y+VE+Q P DCVSA+YTVL+RRRGHVT D   PG+P Y +KAF+P I+SF
Sbjct: 841  MATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSF 900

Query: 1003 GFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRK 1062
            GFETDLR HTQGQAF LSVF HW IVPGDPLDKSIV+RPLEP P  HLAREFM+KTRRRK
Sbjct: 901  GFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRK 960

Query: 1063 GMSEDVSINKFFDEAMMVELAQQAADLHQQM 1090
            G+SEDVSI+KFFD+ M++ELA+Q   L+  M
Sbjct: 961  GLSEDVSISKFFDDPMLLELAKQDVVLNYPM 972

[Close]

BLAST of CSPI02G02380 vs. ExPASy Swiss-Prot
Match: Q5R6E0 (116 kDa U5 small nuclear ribonucleoprotein component OS=Pongo abelii OX=9601 GN=EFTUD2 PE=2 SV=1)

HSP 1 Score: 1217.2 bits (3148), Expect = 0.0e+00
Identity = 614/991 (61.96%), Postives = 741/991 (74.77%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSD---IEDEDEDLMEKPDEDEGVSDGEDAGGASNGWIT 162
            MD  LYDEFGNYIGPE+DSD+D D    E +D D M+  D+D+ + D +D          
Sbjct: 1    MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDIGDHDDDHPGM----- 60

Query: 163  TSNDVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGV 222
                     ++VL EDKKYYPTAEEVYG +VET+V +ED  PL +PIIKPV+  KF +  
Sbjct: 61   ---------EVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLME 120

Query: 223  KD-SRTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKH 282
            +    T     FL  LM N  L+RNV L GH+HHGKT F+D LIEQTH       + ++ 
Sbjct: 121  QTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTH--PEIRKRYDQD 180

Query: 283  LRYTDTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADG 342
            L YTD    EQERG+ IK+ P+++VL D   KSYL NIMDTPGH NFSDE+TA LR++DG
Sbjct: 181  LCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDG 240

Query: 343  AVLIVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEI 402
             VL +DAAEGVM+NTER I+HA+QERL + V INK+DRLI ELKLPP DAYYKLRH ++ 
Sbjct: 241  VVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDE 300

Query: 403  INNHISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFAT 462
            +N  IS  S+      ++ P  GNVCF+S+     FTL SFAK+Y    G   +  +FA 
Sbjct: 301  VNGLISMYSTDEN--LILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFG-DINYQEFAK 360

Query: 463  RLWGDYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGV 522
            RLWGD Y++P TR F KK P S  +RSFV+F+LEPLYKI +QV+G+   S+  TL ELG+
Sbjct: 361  RLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGI 420

Query: 523  TLSNAAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMI 582
             L+    KLN+RPLLRL C   FG  +GF DM VQHIPSP+  +  K++H YTG  DS +
Sbjct: 421  HLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDL 480

Query: 583  YKAMKECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEED 642
             +AM +CDP GPLM + TK+Y   D   F AFGRV SG I  GQ V+VLGE Y+ +DEED
Sbjct: 481  GEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEED 540

Query: 643  MVVKEVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQ 702
              +  V +LW+  AR  + +   P G+WVLIEGVD  I+KTAT++    +E+  IFRPL+
Sbjct: 541  SQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLK 600

Query: 703  FNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIM 762
            FNT  V+K A EP+NPSELPKM++GLRK++KSYP   TKVEESGEH ILGTGELYLD +M
Sbjct: 601  FNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVM 660

Query: 763  KDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIE 822
             DL ++YSE+++KVADPVV+FCETVVE+SS+KCFAETPNKKNKITMIAEPLE+GLAEDIE
Sbjct: 661  HDLPKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIE 720

Query: 823  NGVVSLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNA 882
            N VV + W+RKKLG+FFQTKY+WDLLAARSIWAFGPD  GPNIL+DDTL SEVDK LL +
Sbjct: 721  NEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGS 780

Query: 883  VKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFL 942
            VKDSIVQGFQWG REGPLCDE IRNVKFKI+DA +A EPLHRG GQIIPTARRV YS+FL
Sbjct: 781  VKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFL 840

Query: 943  MATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESF 1002
            MATPRLMEP Y+VE+Q P DCVSA+YTVL+RRRGHVT D   PG+P Y +KAF+P I+SF
Sbjct: 841  MATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSF 900

Query: 1003 GFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRK 1062
            GFETDLR HTQGQAF LSVF HW IVPGDPLDKSIV+RPLEP P  HLAREFM+KTRRRK
Sbjct: 901  GFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRK 960

Query: 1063 GMSEDVSINKFFDEAMMVELAQQAADLHQQM 1090
            G+SEDVSI+KFFD+ M++ELA+Q   L+  M
Sbjct: 961  GLSEDVSISKFFDDPMLLELAKQDVVLNYPM 972

[Close]

BLAST of CSPI02G02380 vs. ExPASy TrEMBL
Match: A0A0A0LI82 (Tr-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009370 PE=3 SV=1)

HSP 1 Score: 2178.3 bits (5643), Expect = 0.0e+00
Identity = 1087/1090 (99.72%), Postives = 1089/1090 (99.91%), Query Frame = 0


Query: 1    MSWIVFLNGLGCGPFILSKRPDTKMGHCKLFISSHRRPHRRVPLLAPPLPPFPPIFTTDY 60
            MSWIVFLNGLGCGPFILSKRPDTKMGHCKLFISSHRRPHRRVPLLAPPLPPFPPIFTTDY
Sbjct: 1    MSWIVFLNGLGCGPFILSKRPDTKMGHCKLFISSHRRPHRRVPLLAPPLPPFPPIFTTDY 60

Query: 61   HTAFSTVVGREFPLLVSHSCPSLSVEGRVFKTLVLASLRILSMDDSLYDEFGNYIGPEID 120
            HTAFSTVVGREFPLLVSHSCPSLSVEGRVFKTLVLASLRILSMDDSLYDEFGNYIGPEID
Sbjct: 61   HTAFSTVVGREFPLLVSHSCPSLSVEGRVFKTLVLASLRILSMDDSLYDEFGNYIGPEID 120

Query: 121  SDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSNDVDMDNQIVLAEDKKYYP 180
            SDKDSDIEDEDE+LMEKP+EDEGVSDGEDAGGASNGWITTSNDVDMDNQIVLAEDKKYYP
Sbjct: 121  SDKDSDIEDEDENLMEKPEEDEGVSDGEDAGGASNGWITTSNDVDMDNQIVLAEDKKYYP 180

Query: 181  TAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDSRTYVSNQFLVGLMSNPTL 240
            TAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDSRTYVSNQFLVGLMSNPTL
Sbjct: 181  TAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDSRTYVSNQFLVGLMSNPTL 240

Query: 241  VRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYTDTRIDEQERGISIKAVPM 300
            VRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYTDTRIDEQERGISIKAVPM
Sbjct: 241  VRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYTDTRIDEQERGISIKAVPM 300

Query: 301  SLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLIVDAAEGVMVNTERAIRHA 360
            SLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLIVDAAEGVMVNTERAIRHA
Sbjct: 301  SLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLIVDAAEGVMVNTERAIRHA 360

Query: 361  IQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNHISAASSTAGNVQVIDPAA 420
            IQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNHISAASSTAGNVQVIDPAA
Sbjct: 361  IQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNHISAASSTAGNVQVIDPAA 420

Query: 421  GNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWGDYYYHPDTRGFKKKQPAS 480
            GNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWGDYYYHPDTRGFKKKQPAS
Sbjct: 421  GNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWGDYYYHPDTRGFKKKQPAS 480

Query: 481  GGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSNAAYKLNVRPLLRLACSSV 540
            GGERSFVQFVLEPLYKIYSQVIGEHRKSVETTL ELGVTLSNAAYKLNVRPLLRLACSSV
Sbjct: 481  GGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLAELGVTLSNAAYKLNVRPLLRLACSSV 540

Query: 541  FGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAMKECDPSGPLMVNITKLYP 600
            FGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAMKECDPSGPLMVNITKLYP
Sbjct: 541  FGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAMKECDPSGPLMVNITKLYP 600

Query: 601  KSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVKEVTKLWLYQARDRVPIAE 660
            KSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVKEVTKLWLYQARDRVPIAE
Sbjct: 601  KSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVKEVTKLWLYQARDRVPIAE 660

Query: 661  APPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKM 720
            APPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKM
Sbjct: 661  APPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKM 720

Query: 721  VEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFC 780
            VEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFC
Sbjct: 721  VEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFC 780

Query: 781  ETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVSLDWSRKKLGDFFQTKYE 840
            ETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVSLDWSRKKLGDFFQTKYE
Sbjct: 781  ETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVSLDWSRKKLGDFFQTKYE 840

Query: 841  WDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAREGPLCDEP 900
            WDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAREGPLCDEP
Sbjct: 841  WDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAREGPLCDEP 900

Query: 901  IRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATPRLMEPVYYVEIQTPIDCV 960
            IRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATPRLMEPVYYVEIQTPIDCV
Sbjct: 901  IRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATPRLMEPVYYVEIQTPIDCV 960

Query: 961  SAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFCLSVFDH 1020
            SAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFCLSVFDH
Sbjct: 961  SAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFCLSVFDH 1020

Query: 1021 WAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMMVELAQ 1080
            WAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMMVELAQ
Sbjct: 1021 WAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMMVELAQ 1080

Query: 1081 QAADLHQQMI 1091
            QAADLHQQMI
Sbjct: 1081 QAADLHQQMI 1090

[Close]

BLAST of CSPI02G02380 vs. ExPASy TrEMBL
Match: A0A5D3BGV4 (116 kDa U5 small nuclear ribonucleoprotein component-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00950 PE=3 SV=1)

HSP 1 Score: 1965.7 bits (5091), Expect = 0.0e+00
Identity = 982/988 (99.39%), Postives = 986/988 (99.80%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 162
            MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN
Sbjct: 1    MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 60

Query: 163  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS 222
            DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRN+KFEVGVKDS
Sbjct: 61   DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120

Query: 223  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 282
            RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT
Sbjct: 121  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 180

Query: 283  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 342
            DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240

Query: 343  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 402
            VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH
Sbjct: 241  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 300

Query: 403  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 462
            ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG
Sbjct: 301  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 360

Query: 463  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSN 522
            DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTL ELGVTLSN
Sbjct: 361  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLAELGVTLSN 420

Query: 523  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 582
            AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM
Sbjct: 421  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 480

Query: 583  KECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVK 642
            +ECDPSGPLMVN+TKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSP+DEEDM VK
Sbjct: 481  EECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540

Query: 643  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 702
            EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600

Query: 703  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 762
            PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660

Query: 763  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 822
            ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV
Sbjct: 661  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 720

Query: 823  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 882
            SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780

Query: 883  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 942
            IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840

Query: 943  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1002
            RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900

Query: 1003 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1062
            DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901  DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960

Query: 1063 DVSINKFFDEAMMVELAQQAADLHQQMI 1091
            DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961  DVSINKFFDEAMMVELAQQAADLHQQMI 988

[Close]

BLAST of CSPI02G02380 vs. ExPASy TrEMBL
Match: A0A1S3C4I3 (116 kDa U5 small nuclear ribonucleoprotein component-like OS=Cucumis melo OX=3656 GN=LOC103496558 PE=3 SV=1)

HSP 1 Score: 1961.0 bits (5079), Expect = 0.0e+00
Identity = 981/988 (99.29%), Postives = 984/988 (99.60%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 162
            MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN
Sbjct: 1    MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 60

Query: 163  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS 222
            DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRN+KFEVGVKDS
Sbjct: 61   DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120

Query: 223  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 282
            RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT
Sbjct: 121  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 180

Query: 283  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 342
            DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240

Query: 343  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 402
            VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH
Sbjct: 241  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 300

Query: 403  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 462
            ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGI FDADKFATRLWG
Sbjct: 301  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGISFDADKFATRLWG 360

Query: 463  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSN 522
            DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTL ELGVTLSN
Sbjct: 361  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLAELGVTLSN 420

Query: 523  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 582
            AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIY AM
Sbjct: 421  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYIAM 480

Query: 583  KECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVK 642
            KECDPSGPLMVN+TKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSP+DEEDM VK
Sbjct: 481  KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540

Query: 643  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 702
            EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600

Query: 703  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 762
            PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660

Query: 763  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 822
            ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV
Sbjct: 661  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 720

Query: 823  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 882
            SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780

Query: 883  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 942
            IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840

Query: 943  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1002
            RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900

Query: 1003 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1062
            DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901  DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960

Query: 1063 DVSINKFFDEAMMVELAQQAADLHQQMI 1091
            DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961  DVSINKFFDEAMMVELAQQAADLHQQMI 988

[Close]

BLAST of CSPI02G02380 vs. ExPASy TrEMBL
Match: A0A6J1G489 (110 kDa U5 small nuclear ribonucleoprotein component CLO OS=Cucurbita moschata OX=3662 GN=LOC111450655 PE=3 SV=1)

HSP 1 Score: 1941.4 bits (5028), Expect = 0.0e+00
Identity = 966/988 (97.77%), Postives = 982/988 (99.39%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 162
            MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPD+DEGVSDGEDAGGASNGWITTSN
Sbjct: 1    MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 60

Query: 163  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS 222
            DVDMDNQIVLAEDKKYYPTAEEVYG+DVETLVMDEDELPLEQPIIKPVRN+KFEVGVKDS
Sbjct: 61   DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120

Query: 223  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 282
             TYVSNQFLVGLMSNPTLVRNVALVGH+HHGKTVFMDML+EQTHHMSTFDIKGEKHLRYT
Sbjct: 121  STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 180

Query: 283  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 342
            DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240

Query: 343  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 402
            VDAAEGVMVNTERA+RHAIQERLPIVVVINKVD+LITELKLPPRDAYYKLRHTLE+INN+
Sbjct: 241  VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 300

Query: 403  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 462
            ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFA+RLWG
Sbjct: 301  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 360

Query: 463  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSN 522
            DYY+H DTRGFKKK PASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTL ELGVTLSN
Sbjct: 361  DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 420

Query: 523  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 582
            AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRD+SSRKVDHIYTGPKDS+IYKAM
Sbjct: 421  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 480

Query: 583  KECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVK 642
            KECDPSGPLMVN+TKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSP+DEEDM VK
Sbjct: 481  KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540

Query: 643  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 702
            EVTKLWLYQARDR+PIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541  EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600

Query: 703  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 762
            PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660

Query: 763  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 822
            ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIEN VV
Sbjct: 661  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 720

Query: 823  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 882
            SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780

Query: 883  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 942
            IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840

Query: 943  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1002
            RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900

Query: 1003 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1062
            DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901  DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960

Query: 1063 DVSINKFFDEAMMVELAQQAADLHQQMI 1091
            DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961  DVSINKFFDEAMMVELAQQAADLHQQMI 988

[Close]

BLAST of CSPI02G02380 vs. ExPASy TrEMBL
Match: A0A6J1KJ78 (110 kDa U5 small nuclear ribonucleoprotein component CLO OS=Cucurbita maxima OX=3661 GN=LOC111493710 PE=3 SV=1)

HSP 1 Score: 1937.2 bits (5017), Expect = 0.0e+00
Identity = 964/988 (97.57%), Postives = 980/988 (99.19%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 162
            MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPD+DEG SD EDAGGASNGWITTSN
Sbjct: 1    MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGASDDEDAGGASNGWITTSN 60

Query: 163  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS 222
            DVDMDNQIVLAEDKKYYPTAEEVYG+DVETLVMDEDELPLEQPIIKPVRN+KFEVGVKDS
Sbjct: 61   DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120

Query: 223  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 282
             TYVSNQFLVGLMSNPTLVRNVALVGH+HHGKTVFMDML+EQTHHMSTFDIKGEKHLRYT
Sbjct: 121  STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 180

Query: 283  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 342
            DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240

Query: 343  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 402
            VDAAEGVMVNTERA+RHAIQERLPIVVVINKVD+LITELKLPPRDAYYKLRHTLE+INN+
Sbjct: 241  VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 300

Query: 403  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 462
            ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFA+RLWG
Sbjct: 301  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 360

Query: 463  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSN 522
            DYY+H DTRGFKKK PASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTL ELGVTLSN
Sbjct: 361  DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 420

Query: 523  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 582
            AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRD+SSRKVDHIYTGPKDS+IYKAM
Sbjct: 421  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 480

Query: 583  KECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVK 642
            KECDPSGPLMVN+TKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSP+DEEDM VK
Sbjct: 481  KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540

Query: 643  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 702
            EVTKLWLYQARDR+PIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541  EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600

Query: 703  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 762
            PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660

Query: 763  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 822
            ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIEN VV
Sbjct: 661  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 720

Query: 823  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 882
            SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780

Query: 883  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 942
            IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840

Query: 943  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1002
            RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900

Query: 1003 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1062
            DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901  DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960

Query: 1063 DVSINKFFDEAMMVELAQQAADLHQQMI 1091
            DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961  DVSINKFFDEAMMVELAQQAADLHQQMI 988

[Close]

BLAST of CSPI02G02380 vs. NCBI nr
Match: XP_004139267.1 (110 kDa U5 small nuclear ribonucleoprotein component CLO [Cucumis sativus] >XP_011648722.1 110 kDa U5 small nuclear ribonucleoprotein component CLO [Cucumis sativus] >KAE8651543.1 hypothetical protein Csa_019420 [Cucumis sativus])

HSP 1 Score: 1967.6 bits (5096), Expect = 0.0e+00
Identity = 985/988 (99.70%), Postives = 987/988 (99.90%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 162
            MDDSLYDEFGNYIGPEIDSDKDSDIEDEDE+LMEKP+EDEGVSDGEDAGGASNGWITTSN
Sbjct: 1    MDDSLYDEFGNYIGPEIDSDKDSDIEDEDENLMEKPEEDEGVSDGEDAGGASNGWITTSN 60

Query: 163  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS 222
            DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS
Sbjct: 61   DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS 120

Query: 223  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 282
            RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT
Sbjct: 121  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 180

Query: 283  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 342
            DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240

Query: 343  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 402
            VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH
Sbjct: 241  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 300

Query: 403  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 462
            ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG
Sbjct: 301  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 360

Query: 463  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSN 522
            DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTL ELGVTLSN
Sbjct: 361  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLAELGVTLSN 420

Query: 523  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 582
            AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM
Sbjct: 421  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 480

Query: 583  KECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVK 642
            KECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVK
Sbjct: 481  KECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVK 540

Query: 643  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 702
            EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600

Query: 703  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 762
            PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660

Query: 763  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 822
            ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV
Sbjct: 661  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 720

Query: 823  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 882
            SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780

Query: 883  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 942
            IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840

Query: 943  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1002
            RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900

Query: 1003 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1062
            DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901  DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960

Query: 1063 DVSINKFFDEAMMVELAQQAADLHQQMI 1091
            DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961  DVSINKFFDEAMMVELAQQAADLHQQMI 988

[Close]

BLAST of CSPI02G02380 vs. NCBI nr
Match: KAA0063554.1 (116 kDa U5 small nuclear ribonucleoprotein component-like protein [Cucumis melo var. makuwa] >TYJ97881.1 116 kDa U5 small nuclear ribonucleoprotein component-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1965.7 bits (5091), Expect = 0.0e+00
Identity = 982/988 (99.39%), Postives = 986/988 (99.80%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 162
            MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN
Sbjct: 1    MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 60

Query: 163  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS 222
            DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRN+KFEVGVKDS
Sbjct: 61   DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120

Query: 223  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 282
            RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT
Sbjct: 121  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 180

Query: 283  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 342
            DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240

Query: 343  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 402
            VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH
Sbjct: 241  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 300

Query: 403  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 462
            ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG
Sbjct: 301  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 360

Query: 463  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSN 522
            DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTL ELGVTLSN
Sbjct: 361  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLAELGVTLSN 420

Query: 523  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 582
            AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM
Sbjct: 421  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 480

Query: 583  KECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVK 642
            +ECDPSGPLMVN+TKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSP+DEEDM VK
Sbjct: 481  EECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540

Query: 643  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 702
            EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600

Query: 703  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 762
            PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660

Query: 763  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 822
            ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV
Sbjct: 661  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 720

Query: 823  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 882
            SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780

Query: 883  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 942
            IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840

Query: 943  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1002
            RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900

Query: 1003 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1062
            DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901  DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960

Query: 1063 DVSINKFFDEAMMVELAQQAADLHQQMI 1091
            DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961  DVSINKFFDEAMMVELAQQAADLHQQMI 988

[Close]

BLAST of CSPI02G02380 vs. NCBI nr
Match: XP_008456689.1 (PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component-like [Cucumis melo])

HSP 1 Score: 1961.0 bits (5079), Expect = 0.0e+00
Identity = 981/988 (99.29%), Postives = 984/988 (99.60%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 162
            MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN
Sbjct: 1    MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 60

Query: 163  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS 222
            DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRN+KFEVGVKDS
Sbjct: 61   DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120

Query: 223  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 282
            RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT
Sbjct: 121  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 180

Query: 283  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 342
            DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240

Query: 343  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 402
            VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH
Sbjct: 241  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 300

Query: 403  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 462
            ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGI FDADKFATRLWG
Sbjct: 301  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGISFDADKFATRLWG 360

Query: 463  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSN 522
            DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTL ELGVTLSN
Sbjct: 361  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLAELGVTLSN 420

Query: 523  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 582
            AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIY AM
Sbjct: 421  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYIAM 480

Query: 583  KECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVK 642
            KECDPSGPLMVN+TKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSP+DEEDM VK
Sbjct: 481  KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540

Query: 643  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 702
            EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600

Query: 703  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 762
            PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660

Query: 763  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 822
            ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV
Sbjct: 661  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 720

Query: 823  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 882
            SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780

Query: 883  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 942
            IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840

Query: 943  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1002
            RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900

Query: 1003 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1062
            DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901  DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960

Query: 1063 DVSINKFFDEAMMVELAQQAADLHQQMI 1091
            DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961  DVSINKFFDEAMMVELAQQAADLHQQMI 988

[Close]

BLAST of CSPI02G02380 vs. NCBI nr
Match: XP_038890041.1 (110 kDa U5 small nuclear ribonucleoprotein component CLO [Benincasa hispida])

HSP 1 Score: 1942.5 bits (5031), Expect = 0.0e+00
Identity = 972/988 (98.38%), Postives = 980/988 (99.19%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 162
            MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEG SDGEDA G SNGWITTSN
Sbjct: 1    MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGASDGEDA-GPSNGWITTSN 60

Query: 163  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS 222
            DVDMDNQIVLAEDKKYYPTAEEVYG+DVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS
Sbjct: 61   DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS 120

Query: 223  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 282
            RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDML+EQTHHMSTFDIKGEKH+RYT
Sbjct: 121  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLVEQTHHMSTFDIKGEKHMRYT 180

Query: 283  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 342
            DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240

Query: 343  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 402
            VDAAEGVMVNTER IRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH
Sbjct: 241  VDAAEGVMVNTERGIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 300

Query: 403  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 462
            ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFA+RLWG
Sbjct: 301  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 360

Query: 463  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSN 522
            DYYYH DTR FKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTL ELGVTLSN
Sbjct: 361  DYYYHSDTRTFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLAELGVTLSN 420

Query: 523  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 582
            AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDS+IYKAM
Sbjct: 421  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSVIYKAM 480

Query: 583  KECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVK 642
            KECDPSGPLMVN+TKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSP+DEEDM VK
Sbjct: 481  KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540

Query: 643  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 702
            EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600

Query: 703  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 762
            PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660

Query: 763  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 822
            ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV
Sbjct: 661  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 720

Query: 823  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 882
            SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDK+LLNAVKDS
Sbjct: 721  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKSLLNAVKDS 780

Query: 883  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 942
            IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840

Query: 943  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1002
            RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900

Query: 1003 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1062
            DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901  DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960

Query: 1063 DVSINKFFDEAMMVELAQQAADLHQQMI 1091
            DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961  DVSINKFFDEAMMVELAQQAADLHQQMI 987

[Close]

BLAST of CSPI02G02380 vs. NCBI nr
Match: XP_022946650.1 (110 kDa U5 small nuclear ribonucleoprotein component CLO [Cucurbita moschata] >XP_022946651.1 110 kDa U5 small nuclear ribonucleoprotein component CLO [Cucurbita moschata])

HSP 1 Score: 1941.4 bits (5028), Expect = 0.0e+00
Identity = 966/988 (97.77%), Postives = 982/988 (99.39%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 162
            MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPD+DEGVSDGEDAGGASNGWITTSN
Sbjct: 1    MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 60

Query: 163  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS 222
            DVDMDNQIVLAEDKKYYPTAEEVYG+DVETLVMDEDELPLEQPIIKPVRN+KFEVGVKDS
Sbjct: 61   DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120

Query: 223  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 282
             TYVSNQFLVGLMSNPTLVRNVALVGH+HHGKTVFMDML+EQTHHMSTFDIKGEKHLRYT
Sbjct: 121  STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 180

Query: 283  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 342
            DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240

Query: 343  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 402
            VDAAEGVMVNTERA+RHAIQERLPIVVVINKVD+LITELKLPPRDAYYKLRHTLE+INN+
Sbjct: 241  VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 300

Query: 403  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 462
            ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFA+RLWG
Sbjct: 301  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 360

Query: 463  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSN 522
            DYY+H DTRGFKKK PASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTL ELGVTLSN
Sbjct: 361  DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 420

Query: 523  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 582
            AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRD+SSRKVDHIYTGPKDS+IYKAM
Sbjct: 421  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 480

Query: 583  KECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVK 642
            KECDPSGPLMVN+TKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSP+DEEDM VK
Sbjct: 481  KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540

Query: 643  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 702
            EVTKLWLYQARDR+PIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541  EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600

Query: 703  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 762
            PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660

Query: 763  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 822
            ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIEN VV
Sbjct: 661  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 720

Query: 823  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 882
            SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780

Query: 883  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 942
            IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840

Query: 943  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1002
            RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900

Query: 1003 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1062
            DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901  DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960

Query: 1063 DVSINKFFDEAMMVELAQQAADLHQQMI 1091
            DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961  DVSINKFFDEAMMVELAQQAADLHQQMI 988

[Close]

BLAST of CSPI02G02380 vs. TAIR 10
Match: AT1G06220.2 (Ribosomal protein S5/Elongation factor G/III/V family protein )

HSP 1 Score: 1753.0 bits (4539), Expect = 0.0e+00
Identity = 861/988 (87.15%), Postives = 925/988 (93.62%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 162
            M+ SLYDEFGNY+GPEI+SD+DSD E EDEDL +K  E+ G SDGE   G SNGWITT N
Sbjct: 1    MESSLYDEFGNYVGPEIESDRDSDDEVEDEDLQDKHLEENG-SDGEQGPGGSNGWITTIN 60

Query: 163  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS 222
            DV+M+NQIVL EDKKYYPTAEEVYGEDVETLVMDEDE PLEQPIIKPVR+++FEVGVKD 
Sbjct: 61   DVEMENQIVLPEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRDIRFEVGVKDQ 120

Query: 223  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 282
             TYVS QFL+GLMSNP LVRNVALVGH+ HGKTVFMDML+EQTHHMSTF+ K EKH++YT
Sbjct: 121  ATYVSTQFLIGLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYT 180

Query: 283  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 342
            DTR+DEQER ISIKAVPMSLVLED  SKSYLCNIMDTPGH NFSDEMTA+LRLADGAVLI
Sbjct: 181  DTRVDEQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLI 240

Query: 343  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 402
            VDAAEGVMVNTERAIRHAIQ+ LPIVVVINKVDRLITELKLPPRDAYYKLRHT+E+INNH
Sbjct: 241  VDAAEGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVINNH 300

Query: 403  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 462
            ISAAS+TAG++ +IDPAAGNVCFAS TAGWSFTLQSFAK+Y KLHG+  D DKFA+RLWG
Sbjct: 301  ISAASTTAGDLPLIDPAAGNVCFASGTAGWSFTLQSFAKMYAKLHGVAMDVDKFASRLWG 360

Query: 463  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSN 522
            D YYH DTR FK+  P  GGER+FVQF+LEPLYKIYSQVIGEH+KSVETTL ELGVTLSN
Sbjct: 361  DVYYHSDTRVFKRSPPVGGGERAFVQFILEPLYKIYSQVIGEHKKSVETTLAELGVTLSN 420

Query: 523  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 582
            +AYKLNVRPLLRLACSSVFG ASGFTDMLV+HIPSPR+A++RKVDH YTG KDS IY++M
Sbjct: 421  SAYKLNVRPLLRLACSSVFGSASGFTDMLVKHIPSPREAAARKVDHSYTGTKDSPIYESM 480

Query: 583  KECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVK 642
             ECDPSGPLMVN+TKLYPKSD SVFD FGRVYSG++QTGQ+VRVLGEGYSP+DEEDM +K
Sbjct: 481  VECDPSGPLMVNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMTIK 540

Query: 643  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 702
            EVTKLW+YQAR R+P++ APPGSWVLIEGVDASIMKTATL N  YDEDVYIFR LQFNTL
Sbjct: 541  EVTKLWIYQARYRIPVSSAPPGSWVLIEGVDASIMKTATLCNASYDEDVYIFRALQFNTL 600

Query: 703  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 762
            PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660

Query: 763  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 822
            ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPL+RGLAEDIENGVV
Sbjct: 661  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLDRGLAEDIENGVV 720

Query: 823  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 882
            S+DW+RK+LGDFF+TKY+WDLLAARSIWAFGPDKQGPNILLDDTL +EVD+NL+ AVKDS
Sbjct: 721  SIDWNRKQLGDFFRTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDRNLMMAVKDS 780

Query: 883  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 942
            IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQ+IPTARRVAYS+FLMATP
Sbjct: 781  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMATP 840

Query: 943  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1002
            RLMEPVYYVEIQTPIDCV+AIYTVLSRRRGHVT+DV QPGTPAYIVKAFLPVIESFGFET
Sbjct: 841  RLMEPVYYVEIQTPIDCVTAIYTVLSRRRGHVTSDVPQPGTPAYIVKAFLPVIESFGFET 900

Query: 1003 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1062
            DLRYHTQGQAFCLSVFDHWAIVPGDPLDK+I LRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901  DLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGMSE 960

Query: 1063 DVSINKFFDEAMMVELAQQAADLHQQMI 1091
            DVS NKFFDEAMMVELAQQ  DLH QMI
Sbjct: 961  DVSGNKFFDEAMMVELAQQTGDLHLQMI 987

[Close]

BLAST of CSPI02G02380 vs. TAIR 10
Match: AT1G06220.1 (Ribosomal protein S5/Elongation factor G/III/V family protein )

HSP 1 Score: 1753.0 bits (4539), Expect = 0.0e+00
Identity = 861/988 (87.15%), Postives = 925/988 (93.62%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 162
            M+ SLYDEFGNY+GPEI+SD+DSD E EDEDL +K  E+ G SDGE   G SNGWITT N
Sbjct: 1    MESSLYDEFGNYVGPEIESDRDSDDEVEDEDLQDKHLEENG-SDGEQGPGGSNGWITTIN 60

Query: 163  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGVKDS 222
            DV+M+NQIVL EDKKYYPTAEEVYGEDVETLVMDEDE PLEQPIIKPVR+++FEVGVKD 
Sbjct: 61   DVEMENQIVLPEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRDIRFEVGVKDQ 120

Query: 223  RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 282
             TYVS QFL+GLMSNP LVRNVALVGH+ HGKTVFMDML+EQTHHMSTF+ K EKH++YT
Sbjct: 121  ATYVSTQFLIGLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYT 180

Query: 283  DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 342
            DTR+DEQER ISIKAVPMSLVLED  SKSYLCNIMDTPGH NFSDEMTA+LRLADGAVLI
Sbjct: 181  DTRVDEQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLI 240

Query: 343  VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 402
            VDAAEGVMVNTERAIRHAIQ+ LPIVVVINKVDRLITELKLPPRDAYYKLRHT+E+INNH
Sbjct: 241  VDAAEGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVINNH 300

Query: 403  ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 462
            ISAAS+TAG++ +IDPAAGNVCFAS TAGWSFTLQSFAK+Y KLHG+  D DKFA+RLWG
Sbjct: 301  ISAASTTAGDLPLIDPAAGNVCFASGTAGWSFTLQSFAKMYAKLHGVAMDVDKFASRLWG 360

Query: 463  DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSN 522
            D YYH DTR FK+  P  GGER+FVQF+LEPLYKIYSQVIGEH+KSVETTL ELGVTLSN
Sbjct: 361  DVYYHSDTRVFKRSPPVGGGERAFVQFILEPLYKIYSQVIGEHKKSVETTLAELGVTLSN 420

Query: 523  AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 582
            +AYKLNVRPLLRLACSSVFG ASGFTDMLV+HIPSPR+A++RKVDH YTG KDS IY++M
Sbjct: 421  SAYKLNVRPLLRLACSSVFGSASGFTDMLVKHIPSPREAAARKVDHSYTGTKDSPIYESM 480

Query: 583  KECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVK 642
             ECDPSGPLMVN+TKLYPKSD SVFD FGRVYSG++QTGQ+VRVLGEGYSP+DEEDM +K
Sbjct: 481  VECDPSGPLMVNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMTIK 540

Query: 643  EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 702
            EVTKLW+YQAR R+P++ APPGSWVLIEGVDASIMKTATL N  YDEDVYIFR LQFNTL
Sbjct: 541  EVTKLWIYQARYRIPVSSAPPGSWVLIEGVDASIMKTATLCNASYDEDVYIFRALQFNTL 600

Query: 703  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 762
            PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601  PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660

Query: 763  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 822
            ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPL+RGLAEDIENGVV
Sbjct: 661  ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLDRGLAEDIENGVV 720

Query: 823  SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 882
            S+DW+RK+LGDFF+TKY+WDLLAARSIWAFGPDKQGPNILLDDTL +EVD+NL+ AVKDS
Sbjct: 721  SIDWNRKQLGDFFRTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDRNLMMAVKDS 780

Query: 883  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 942
            IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQ+IPTARRVAYS+FLMATP
Sbjct: 781  IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMATP 840

Query: 943  RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1002
            RLMEPVYYVEIQTPIDCV+AIYTVLSRRRGHVT+DV QPGTPAYIVKAFLPVIESFGFET
Sbjct: 841  RLMEPVYYVEIQTPIDCVTAIYTVLSRRRGHVTSDVPQPGTPAYIVKAFLPVIESFGFET 900

Query: 1003 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1062
            DLRYHTQGQAFCLSVFDHWAIVPGDPLDK+I LRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901  DLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGMSE 960

Query: 1063 DVSINKFFDEAMMVELAQQAADLHQQMI 1091
            DVS NKFFDEAMMVELAQQ  DLH QMI
Sbjct: 961  DVSGNKFFDEAMMVELAQQTGDLHLQMI 987

[Close]

BLAST of CSPI02G02380 vs. TAIR 10
Match: AT5G25230.1 (Ribosomal protein S5/Elongation factor G/III/V family protein )

HSP 1 Score: 1669.1 bits (4321), Expect = 0.0e+00
Identity = 828/990 (83.64%), Postives = 899/990 (90.81%), Query Frame = 0


Query: 103  MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 162
            MD SLY E GNYIGPEI+SD+DSD   EDEDL E               G SNGWITT N
Sbjct: 1    MDGSLYGECGNYIGPEIESDRDSDDSVEDEDLQEP--------------GGSNGWITTIN 60

Query: 163  DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGV-KD 222
            +   +  IVL EDKKYYP A+EVYGEDVETLVMDEDE  LEQPIIKPVR+++FEVGV KD
Sbjct: 61   E---NQNIVLPEDKKYYPIAKEVYGEDVETLVMDEDEQSLEQPIIKPVRDIRFEVGVIKD 120

Query: 223  -SRTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLR 282
             + TYVS  FL+GLMSNP LVRNVALVGH+ HGKTVFMDML+EQTH MSTF+ + +KH+R
Sbjct: 121  QTTTYVSTLFLIGLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMR 180

Query: 283  YTDTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAV 342
            YTDTR+DEQER ISIKAVPMSLVLED  SKSYLCNIMDTPG+ NFSDEMTA+LRLADGAV
Sbjct: 181  YTDTRVDEQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGNVNFSDEMTASLRLADGAV 240

Query: 343  LIVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIIN 402
             IVDAA+GVMVNTERAIRHAIQ+ LPIVVVINKVDRLITELKLPPRDAYYKLR+T+E+IN
Sbjct: 241  FIVDAAQGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRYTIEVIN 300

Query: 403  NHISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRL 462
            NHISAAS+ A ++ +IDPAAGNVCFAS TAGWSFTLQSFA++Y KLHG+  D DKFA+RL
Sbjct: 301  NHISAASTNAADLPLIDPAAGNVCFASGTAGWSFTLQSFARMYAKLHGVAMDVDKFASRL 360

Query: 463  WGDYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTL 522
            WGD YYHPDTR F    P  GGER+FVQF+LEPLYKIYSQVIGEH+KSVETTL ELGVTL
Sbjct: 361  WGDVYYHPDTRVFNTSPPVGGGERAFVQFILEPLYKIYSQVIGEHKKSVETTLAELGVTL 420

Query: 523  SNAAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYK 582
            SN+AYKLNVRPLLRLACSSVFG ASGFTDMLV+HIPSPR+A++RKVDH YTG KDS IY+
Sbjct: 421  SNSAYKLNVRPLLRLACSSVFGSASGFTDMLVKHIPSPREAAARKVDHSYTGTKDSPIYE 480

Query: 583  AMKECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMV 642
            +M ECDPSGPLMVN+TKLYPKSD SVFD FGRVYSG++QTGQ+VRVLGEGYSP+DEEDM 
Sbjct: 481  SMVECDPSGPLMVNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMT 540

Query: 643  VKEVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFN 702
            +KEVTKLW+YQAR R+P++ APPGSWVLIEGVDASIMKTATL N  YDEDVYIFR L+FN
Sbjct: 541  IKEVTKLWIYQARYRIPVSSAPPGSWVLIEGVDASIMKTATLCNASYDEDVYIFRALKFN 600

Query: 703  TLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKD 762
            TLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSI+KD
Sbjct: 601  TLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIIKD 660

Query: 763  LRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENG 822
            LRELYSEV+VKVADPVVSFCETVVESSSMKCFAETPNKKNK+TMIAEPL+RGLAEDIENG
Sbjct: 661  LRELYSEVQVKVADPVVSFCETVVESSSMKCFAETPNKKNKLTMIAEPLDRGLAEDIENG 720

Query: 823  VVSLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVK 882
            VVS+DW+R +LGDFF+TKY+WDLLAARSIWAFGPDKQG NILLDDTL +EVD+NL+  VK
Sbjct: 721  VVSIDWNRVQLGDFFRTKYDWDLLAARSIWAFGPDKQGTNILLDDTLPTEVDRNLMMGVK 780

Query: 883  DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMA 942
            DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQ+IPTARRVAYS+FLMA
Sbjct: 781  DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMA 840

Query: 943  TPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGF 1002
            TPRLMEPVYYVEIQTPIDCV+AIYTVLSRRRG+VT+DV QPGTPAYIVKAFLPVIESFGF
Sbjct: 841  TPRLMEPVYYVEIQTPIDCVTAIYTVLSRRRGYVTSDVPQPGTPAYIVKAFLPVIESFGF 900

Query: 1003 ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGM 1062
            ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDK+I LRPLEPAPIQHLAREFMVKTRRRKGM
Sbjct: 901  ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGM 960

Query: 1063 SEDVSINKFFDEAMMVELAQQAADLHQQMI 1091
            SEDVS NKFFDEAMMVELAQQ  DLH QMI
Sbjct: 961  SEDVSGNKFFDEAMMVELAQQTGDLHLQMI 973

[Close]

BLAST of CSPI02G02380 vs. TAIR 10
Match: AT1G56070.1 (Ribosomal protein S5/Elongation factor G/III/V family protein )

HSP 1 Score: 619.8 bits (1597), Expect = 4.3e-177
Identity = 330/849 (38.87%), Postives = 514/849 (60.54%), Query Frame = 0


Query: 241  VRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYTDTRIDEQERGISIKAVPM 300
            +RN++++ HV HGK+   D L+     ++  ++ G+  +R TDTR DE ERGI+IK+  +
Sbjct: 19   IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQ-EVAGD--VRMTDTRADEAERGITIKSTGI 78

Query: 301  SLVLE-------------DGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLIVDAAE 360
            SL  E             DGN   YL N++D+PGH +FS E+TAALR+ DGA+++VD  E
Sbjct: 79   SLYYEMTDESLKSFTGARDGN--EYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIE 138

Query: 361  GVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNHISA-A 420
            GV V TE  +R A+ ER+  V+ +NK+DR   EL++   +AY      +E  N  ++   
Sbjct: 139  GVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYE 198

Query: 421  SSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWGDYYY 480
                G+VQV  P  G V F++   GW+FTL +FAK+Y    G+     K   RLWG+ ++
Sbjct: 199  DPLLGDVQVY-PEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVV--ESKMMERLWGENFF 258

Query: 481  HPDTRGFKKKQPASGG-ERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSNAAY 540
             P TR +  K   S   +R FVQF  EP+ +I +  + + +  +   L +LGV++ N   
Sbjct: 259  DPATRKWSGKNTGSPTCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLAKLGVSMKNDEK 318

Query: 541  KLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAMKEC 600
            +L  +PL++    +    ++   +M++ H+PSP  A   +V+++Y GP D     A++ C
Sbjct: 319  ELMGKPLMKRVMQTWLPASTALLEMMIFHLPSPHTAQRYRVENLYEGPLDDQYANAIRNC 378

Query: 601  DPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVKEVT 660
            DP+GPLM+ ++K+ P SD   F AFGRV++GK+ TG  VR++G  Y P +++D+  K V 
Sbjct: 379  DPNGPLMLYVSKMIPASDKGRFFAFGRVFAGKVSTGMKVRIMGPNYIPGEKKDLYTKSVQ 438

Query: 661  KLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTLPVV 720
            +  ++  + +  + + P G+ V + G+D  I K ATL+N + + D +  R ++F+  PVV
Sbjct: 439  RTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTN-EKEVDAHPIRAMKFSVSPVV 498

Query: 721  KTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR-EL 780
            + A +    S+LPK+VEGL++++KS P+ +  +EESGEH + G GEL+L+  +KDL+ + 
Sbjct: 499  RVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTMEESGEHIVAGAGELHLEICLKDLQDDF 558

Query: 781  YSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVSL 840
                E+  +DPVVSF ETV + S+    +++PNK N++ M A P+E GLAE I++G +  
Sbjct: 559  MGGAEIIKSDPVVSFRETVCDRSTRTVMSKSPNKHNRLYMEARPMEEGLAEAIDDGRIGP 618

Query: 841  DWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIV 900
                K        ++ WD   A+ IWAFGP+  GPN+++D     +     LN +KDS+V
Sbjct: 619  RDDPKIRSKILAEEFGWDKDLAKKIWAFGPETTGPNMVVDMCKGVQ----YLNEIKDSVV 678

Query: 901  QGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATPRL 960
             GFQW ++EGPL +E +R + F++ D  +  + +HRG GQ+IPTARRV Y+S + A PRL
Sbjct: 679  AGFQWASKEGPLAEENMRGICFEVCDVVLHSDAIHRGGGQVIPTARRVIYASQITAKPRL 738

Query: 961  MEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFETDL 1020
            +EPVY VEIQ P   +  IY+VL+++RGHV  ++ +PGTP Y +KA+LPV+ESFGF + L
Sbjct: 739  LEPVYMVEIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSQL 798

Query: 1021 RYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSEDV 1073
            R  T GQAF   VFDHW ++  D         PLEP      A   +   R+RKG+ E +
Sbjct: 799  RAATSGQAFPQCVFDHWEMMSSD---------PLEPGT---QASVLVADIRKRKGLKEAM 842

[Close]

BLAST of CSPI02G02380 vs. TAIR 10
Match: AT3G12915.1 (Ribosomal protein S5/Elongation factor G/III/V family protein )

HSP 1 Score: 597.8 bits (1540), Expect = 1.7e-170
Identity = 312/801 (38.95%), Postives = 482/801 (60.17%), Query Frame = 0


Query: 244  VALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYTDTRIDEQERGISIKAVPMSLV 303
            ++++ HV HGK+   D L+     ++  +  G+  +R TDTR DE ERGI+IK+  +SL 
Sbjct: 1    MSVIAHVDHGKSTLTDSLVAAAGIIAQ-ETAGD--VRMTDTRADEAERGITIKSTGISLY 60

Query: 304  LE-------------DGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLIVDAAEGVM 363
             E             DGN   YL N++D+PGH +FS E+TAALR+ DGA+++VD  EGV 
Sbjct: 61   YEMTDASLKSFTGARDGN--EYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVC 120

Query: 364  VNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNHISA-ASST 423
            V TE  +R ++ ER+  V+ +NK+DR   ELK+   +AY   +  +E  N  ++      
Sbjct: 121  VQTETVLRQSLGERIRPVLTVNKMDRCFLELKVDGEEAYQNFQRVIENANVIMATHEDPL 180

Query: 424  AGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWGDYYYHPD 483
             G+VQV  P  G V F++   GW+FTL +FAK+Y    G+     K   RLWG+ ++   
Sbjct: 181  LGDVQVY-PEKGTVAFSAGLHGWAFTLTNFAKMYASKFGV--SESKMMERLWGENFFDSA 240

Query: 484  TRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLVELGVTLSNAAYKLNV 543
            TR +  K  +   +R FVQF  EP+  + +  + + +  +   L +LG+ +     +L  
Sbjct: 241  TRKWTTKTGSPTCKRGFVQFCYEPIKIMINTCMNDQKDKLWPMLEKLGIQMKPDEKELMG 300

Query: 544  RPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAMKECDPSG 603
            +PL++    +    ++   +M++ H+PSP  A   +V+++Y GP D     A++ CDP G
Sbjct: 301  KPLMKRVMQAWLPASTALLEMMIFHLPSPYTAQRYRVENLYEGPLDDKYAAAIRNCDPDG 360

Query: 604  PLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVKEVTKLWL 663
            PLM+ ++K+ P SD   F AFGRV+SG + TG  VR++G  Y P +++D+ VK V +  +
Sbjct: 361  PLMLYVSKMIPASDKGRFFAFGRVFSGTVSTGMKVRIMGPNYVPGEKKDLYVKSVQRTVI 420

Query: 664  YQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTLPVVKTAT 723
            +  + +  + + P G+ V + G+D  I K  TL+N + + D +  R ++F+  PVV+ A 
Sbjct: 421  WMGKKQETVEDVPCGNTVAMVGLDQFITKNGTLTN-EKEVDAHPLRAMKFSVSPVVRVAV 480

Query: 724  EPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVE 783
            +    S+LPK+VEGL++++KS P+ +  +EESGEH + G GEL+++  +KDL++     +
Sbjct: 481  KCKLASDLPKLVEGLKRLAKSDPMVLCTMEESGEHIVAGAGELHIEICVKDLQDFMGGAD 540

Query: 784  VKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVSLDWSRK 843
            + V+DPVVS  ETV E S     +++PNK N++ M A P+E GLAE I+ G +      K
Sbjct: 541  IIVSDPVVSLRETVFERSCRTVMSKSPNKHNRLYMEARPMEDGLAEAIDEGRIGPSDDPK 600

Query: 844  KLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIVQGFQW 903
                    ++ WD   A+ IWAFGPD  GPN+++D     +     LN +KDS+V GFQW
Sbjct: 601  IRSKILAEEFGWDKDLAKKIWAFGPDTTGPNMVVDMCKGVQ----YLNEIKDSVVAGFQW 660

Query: 904  GAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATPRLMEPVY 963
             ++EGPL +E +R V +++ D  +  + +HRG GQ+I TARR  Y+S L A PRL+EPVY
Sbjct: 661  ASKEGPLAEENMRGVCYEVCDVVLHADAIHRGCGQMISTARRAIYASQLTAKPRLLEPVY 720

Query: 964  YVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFETDLRYHTQ 1023
             VEIQ P   +  IY+VL+++RGHV  ++ +PGTP Y +KA+LPV+ESFGF   LR  T 
Sbjct: 721  MVEIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSGQLRAATS 780

Query: 1024 GQAFCLSVFDHWAIVPGDPLD 1031
            GQAF   VFDHW ++  DPL+
Sbjct: 781  GQAFPQCVFDHWDMMSSDPLE 788

The following BLAST results are available for this feature:

BLAST of CSPI02G02380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNC5	0.0e+00	87.15	110 kDa U5 small nuclear ribonucleoprotein component CLO OS=Arabidopsis thaliana...	[more]
F4JWP9	0.0e+00	83.64	109 kDa U5 small nuclear ribonucleoprotein component GFL OS=Arabidopsis thaliana...	[more]
O08810	0.0e+00	62.49	116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN...	[more]
Q15029	0.0e+00	62.16	116 kDa U5 small nuclear ribonucleoprotein component OS=Homo sapiens OX=9606 GN=...	[more]
Q5R6E0	0.0e+00	61.96	116 kDa U5 small nuclear ribonucleoprotein component OS=Pongo abelii OX=9601 GN=...	[more]

BLAST of CSPI02G02380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI82	0.0e+00	99.72	Tr-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009370 P...	[more]
A0A5D3BGV4	0.0e+00	99.39	116 kDa U5 small nuclear ribonucleoprotein component-like protein OS=Cucumis mel...	[more]
A0A1S3C4I3	0.0e+00	99.29	116 kDa U5 small nuclear ribonucleoprotein component-like OS=Cucumis melo OX=365...	[more]
A0A6J1G489	0.0e+00	97.77	110 kDa U5 small nuclear ribonucleoprotein component CLO OS=Cucurbita moschata O...	[more]
A0A6J1KJ78	0.0e+00	97.57	110 kDa U5 small nuclear ribonucleoprotein component CLO OS=Cucurbita maxima OX=...	[more]

BLAST of CSPI02G02380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139267.1	0.0e+00	99.70	110 kDa U5 small nuclear ribonucleoprotein component CLO [Cucumis sativus] >XP_0...	[more]
KAA0063554.1	0.0e+00	99.39	116 kDa U5 small nuclear ribonucleoprotein component-like protein [Cucumis melo ...	[more]
XP_008456689.1	0.0e+00	99.29	PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component-like [Cucumis me...	[more]
XP_038890041.1	0.0e+00	98.38	110 kDa U5 small nuclear ribonucleoprotein component CLO [Benincasa hispida]	[more]
XP_022946650.1	0.0e+00	97.77	110 kDa U5 small nuclear ribonucleoprotein component CLO [Cucurbita moschata] >X...	[more]

BLAST of CSPI02G02380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06220.2	0.0e+00	87.15	Ribosomal protein S5/Elongation factor G/III/V family protein	[more]
AT1G06220.1	0.0e+00	87.15	Ribosomal protein S5/Elongation factor G/III/V family protein	[more]
AT5G25230.1	0.0e+00	83.64	Ribosomal protein S5/Elongation factor G/III/V family protein	[more]
AT1G56070.1	4.3e-177	38.87	Ribosomal protein S5/Elongation factor G/III/V family protein	[more]
AT3G12915.1	1.7e-170	38.95	Ribosomal protein S5/Elongation factor G/III/V family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000795	Translational (tr)-type GTP-binding domain	PRINTS	PR00315	ELONGATNFCT	coord: 243..256 score: 48.47 coord: 290..298 score: 51.26 coord: 315..325 score: 49.4 coord: 367..376 score: 48.8 coord: 331..342 score: 40.45
IPR000795	Translational (tr)-type GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 241..555 e-value: 4.7E-51 score: 173.1
IPR000795	Translational (tr)-type GTP-binding domain	PROSITE	PS51722	G_TR_2	coord: 239..447 score: 41.823692
IPR000640	Elongation factor EFG, domain V-like	SMART	SM00838	EFG_C_a	coord: 943..1032 e-value: 8.8E-21 score: 85.0
IPR000640	Elongation factor EFG, domain V-like	PFAM	PF00679	EFG_C	coord: 943..1031 e-value: 1.0E-22 score: 79.9
IPR005517	Translation elongation factor EFG/EF2, domain IV	SMART	SM00889	EFG_IV_2	coord: 820..941 e-value: 2.6E-20 score: 83.5
IPR005517	Translation elongation factor EFG/EF2, domain IV	PFAM	PF03764	EFG_IV	coord: 826..940 e-value: 3.4E-22 score: 78.5
IPR031950	116kDa U5 small nuclear ribonucleoprotein component, N-terminal	PFAM	PF16004	EFTUD2	coord: 105..221 e-value: 2.2E-33 score: 115.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 233..437 e-value: 1.9E-46 score: 160.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 227..556
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 784..938 e-value: 2.5E-60 score: 204.8
None	No IPR available	GENE3D	3.30.70.870	Elongation Factor G (Translational Gtpase), domain 3	coord: 702..778 e-value: 3.4E-25 score: 89.8
None	No IPR available	GENE3D	3.30.70.240		coord: 939..1060 e-value: 5.3E-43 score: 147.4
None	No IPR available	GENE3D	3.90.1430.10	Yeast translation eEF2 (G' domain)	coord: 438..540 e-value: 3.9E-24 score: 87.0
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 558..700 e-value: 8.3E-43 score: 147.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..161
None	No IPR available	PANTHER	PTHR42908:SF6	116 KDA U5 SMALL NUCLEAR RIBONUCLEOPROTEIN COMPONENT	coord: 166..1080
None	No IPR available	PANTHER	PTHR42908	TRANSLATION ELONGATION FACTOR-RELATED	coord: 166..1080
None	No IPR available	CDD	cd01683	EF2_IV_snRNP	coord: 774..951 e-value: 1.43058E-121 score: 368.155
None	No IPR available	CDD	cd04090	EF2_II_snRNP	coord: 591..684 e-value: 1.62197E-45 score: 156.628
None	No IPR available	CDD	cd16264	snRNP_III	coord: 703..774 e-value: 9.40748E-38 score: 133.778
IPR004161	Translation elongation factor EFTu-like, domain 2	PFAM	PF03144	GTP_EFTU_D2	coord: 609..682 e-value: 2.0E-11 score: 44.1
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 242..401 e-value: 1.1E-14 score: 52.5
IPR035655	116kDa U5 small nuclear ribonucleoprotein component, C-terminal	CDD	cd04098	eEF2_C_snRNP	coord: 946..1025 e-value: 6.32182E-49 score: 165.882
IPR044121	Snu114, GTP-binding domain	CDD	cd04167	Snu114p	coord: 242..443 e-value: 3.58394E-110 score: 339.629
IPR035647	EF-G domain III/V-like	SUPERFAMILY	54980	EF-G C-terminal domain-like	coord: 702..775
IPR035647	EF-G domain III/V-like	SUPERFAMILY	54980	EF-G C-terminal domain-like	coord: 946..1033
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 557..687
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 777..945

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G02380.1	CSPI02G02380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0006414	translational elongation
cellular_component	GO:0071007	U2-type catalytic step 2 spliceosome
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0030623	U5 snRNA binding