
CSPI02G01300 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATTGCAATGGCTGTGCTAGAAGAGTTGAGAAACATATATCCAAGATACAAGGTAATGTTTTTTTTTTAAATAATAATAATTATTATTACGAGGTAAATTGTAAAAAAAATGACAAAATGTAAATAGTTTGTATATTTTTAAATTTATTGAAAAATACAAAACTAAAAGTATAGTTGATGTCAATTCTATGAATAATAATTAAGTATATAACAACATTTCACAAATGTTGTAAATATAACAAAATTTATCGATGATATATTATGATAGATCAATATTTACAACATGGTATATTAGTGATAGATTTTGACAAATTTGACTATATTTGCAATTTTTTAAAAATATTTTATATATTTAATTATTTTGAATCTAATGACTATATTTTATAATATATATATGTCCAAATTGGTGGTTTTGAAATTTGGTTCAAATCCCCGCATATATTGTTTCTACATCCCAATTTCGTTAATAAAACAGTCCATGAACTAAAAGATTTGTACAGTACCCATCAAACATGCTTAATCATCTAATAATGTTTTACATAAATAACTATGTATACTTAATATCATATTTATTAATAAAGTAGGGAGATTGTATTAGATGACAAAAACAAAAATAAAAAAACAAATTTATAGTATTTTTGTTTATATTACAAATTTGATAAATTTGACATATTTTTAAATTTGCCATTTAAAAAATGTAGATGACGTGGAATCTGTTATTATATTTTCTTTTGTTATTTTTGTAAACTCGCCAGTAAAGTAGGTATCAAAATAAAATTTAAATCTATGCTATCTATCTTATAATACTTGCTTTTAGGCGTGGAATCATGGAAGGTAGATATGGAAAGGGAGACTGTGGTTGTTACCGGAGATGTTTTTCCTTTTGAAGTCATGCAATGTATTTCTAAAGTGAAGAGTGTAGAGATTTTGGAGCCTCAAGTT ATGCATTGCAATGGCTGTGCTAGAAGAGTTGAGAAACATATATCCAAGATACAAGGCGTGGAATCATGGAAGGTAGATATGGAAAGGGAGACTGTGGTTGTTACCGGAGATGTTTTTCCTTTTGAAGTCATGCAATGTATTTCTAAAGTGAAGAGTGTAGAGATTTTGGAGCCTCAAGTT ATGCATTGCAATGGCTGTGCTAGAAGAGTTGAGAAACATATATCCAAGATACAAGGCGTGGAATCATGGAAGGTAGATATGGAAAGGGAGACTGTGGTTGTTACCGGAGATGTTTTTCCTTTTGAAGTCATGCAATGTATTTCTAAAGTGAAGAGTGTAGAGATTTTGGAGCCTCAAGTT MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV Homology
BLAST of CSPI02G01300 vs. ExPASy Swiss-Prot
Match: Q8RXH8 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAKR3 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 6.3e-11 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0
BLAST of CSPI02G01300 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 9.1e-10 Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of CSPI02G01300 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 3.5e-09 Identity = 24/54 (44.44%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of CSPI02G01300 vs. ExPASy Swiss-Prot
Match: Q0WV37 (Heavy metal-associated isoprenylated plant protein 34 OS=Arabidopsis thaliana OX=3702 GN=HIPP34 PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 1.8e-05 Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 0
BLAST of CSPI02G01300 vs. ExPASy Swiss-Prot
Match: A0JPW5 (Heavy metal-associated isoprenylated plant protein 19 OS=Arabidopsis thaliana OX=3702 GN=HIPP19 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 1.5e-04 Identity = 20/49 (40.82%), Postives = 32/49 (65.31%), Query Frame = 0
BLAST of CSPI02G01300 vs. ExPASy TrEMBL
Match: A0A0A0LFW6 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G005300 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 9.4e-26 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of CSPI02G01300 vs. ExPASy TrEMBL
Match: A0A5A7V1Y2 (Copper-binding family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001300 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 3.7e-22 Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of CSPI02G01300 vs. ExPASy TrEMBL
Match: A0A1S3C8H9 (uncharacterized protein LOC103497691 OS=Cucumis melo OX=3656 GN=LOC103497691 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 3.7e-22 Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of CSPI02G01300 vs. ExPASy TrEMBL
Match: A0A6J1G3J1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450448 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.5e-18 Identity = 47/59 (79.66%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of CSPI02G01300 vs. ExPASy TrEMBL
Match: A0A6J1KFP0 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493873 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.1e-17 Identity = 46/59 (77.97%), Postives = 54/59 (91.53%), Query Frame = 0
BLAST of CSPI02G01300 vs. NCBI nr
Match: XP_031736582.1 (uncharacterized protein LOC116402031 [Cucumis sativus] >KAE8651518.1 hypothetical protein Csa_019330 [Cucumis sativus]) HSP 1 Score: 125.2 bits (313), Expect = 1.9e-25 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of CSPI02G01300 vs. NCBI nr
Match: XP_008458177.1 (PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo] >KAA0061568.1 copper-binding family protein [Cucumis melo var. makuwa]) HSP 1 Score: 113.2 bits (282), Expect = 7.6e-22 Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of CSPI02G01300 vs. NCBI nr
Match: XP_022946348.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 101.3 bits (251), Expect = 3.0e-18 Identity = 47/59 (79.66%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of CSPI02G01300 vs. NCBI nr
Match: KAG6599442.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 101.3 bits (251), Expect = 3.0e-18 Identity = 47/59 (79.66%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of CSPI02G01300 vs. NCBI nr
Match: KAG7030420.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 101.3 bits (251), Expect = 3.0e-18 Identity = 47/59 (79.66%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of CSPI02G01300 vs. TAIR 10
Match: AT3G53530.1 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 67.4 bits (163), Expect = 4.5e-12 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0
BLAST of CSPI02G01300 vs. TAIR 10
Match: AT3G24450.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 67.0 bits (162), Expect = 5.8e-12 Identity = 28/55 (50.91%), Postives = 43/55 (78.18%), Query Frame = 0
BLAST of CSPI02G01300 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 63.5 bits (153), Expect = 6.5e-11 Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of CSPI02G01300 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 63.5 bits (153), Expect = 6.5e-11 Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of CSPI02G01300 vs. TAIR 10
Match: AT3G53530.2 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 62.8 bits (151), Expect = 1.1e-10 Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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