CSPI02G00880 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G00880
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	E3 ubiquitin-protein ligase RING1-like
Location	Chr2: 533095 .. 533739 (+)
RNA-Seq Expression	CSPI02G00880
Synteny	CSPI02G00880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACGATTGATTGGGTAAAATATTTGACATAACAAATAAAATAGTGTATAAGAATAAAGCCTTCTCACACAAATAGAACCCGCTATCTACTCCTCCATTTCCTTACTTCCTAACGCACTTTCTCCCTTAAATTCTCTCAACAATCTCTCCAATGGCTGCCGCTGCTGTCATGACTGAACCCACAATTAATTTACCTTCGCCATATCCAATCGAATTTCTCTTTGACCTCGATACAGTTCTCTCCGGAGCCGACGACCTCGGTTGCTGCCAGATCACCCCTTCCGATTCTCCCGTGGCGGATTTCCCGACGGTTGTGGCCGATGTTTGTGCCGTTTGTTTAGACGATTTCCACCCAGATGAAGCCGGTAAACAAATACCCTGCGGACACGTGTACCATGAGTCTTGTATTTCCTCCTGGCTTACCGTTGCCGACTGTTGCCCTCTCTGTCGGTGCCTTGTCGCTGGCCAACCGCCGGATTCAACTTTGATCCGACGGTAGAGGTTTCTTCTTTCTTTCTTTTTTCGCTTTTTTTGTTGGTGAGGTTTGTTCGACAAATTACAAGTAATTAATTGTTGTTGATTATTGTGATTGCGACTCTTCTCCAAATTTGGAATTAGCTGCTAATTGAACATATTAACTCTCTC

mRNA sequence

ATACGATTGATTGGGTAAAATATTTGACATAACAAATAAAATAGTGTATAAGAATAAAGCCTTCTCACACAAATAGAACCCGCTATCTACTCCTCCATTTCCTTACTTCCTAACGCACTTTCTCCCTTAAATTCTCTCAACAATCTCTCCAATGGCTGCCGCTGCTGTCATGACTGAACCCACAATTAATTTACCTTCGCCATATCCAATCGAATTTCTCTTTGACCTCGATACAGTTCTCTCCGGAGCCGACGACCTCGGTTGCTGCCAGATCACCCCTTCCGATTCTCCCGTGGCGGATTTCCCGACGGTTGTGGCCGATGTTTGTGCCGTTTGTTTAGACGATTTCCACCCAGATGAAGCCGGTAAACAAATACCCTGCGGACACGTGTACCATGAGTCTTGTATTTCCTCCTGGCTTACCGTTGCCGACTGTTGCCCTCTCTGTCGGTGCCTTGTCGCTGGCCAACCGCCGGATTCAACTTTGATCCGACGGTAGAGGTTTCTTCTTTCTTTCTTTTTTCGCTTTTTTTGTTGGTGAGGTTTGTTCGACAAATTACAAGTAATTAATTGTTGTTGATTATTGTGATTGCGACTCTTCTCCAAATTTGGAATTAGCTGCTAATTGAACATATTAACTCTCTC

Coding sequence (CDS)

ATGGCTGCCGCTGCTGTCATGACTGAACCCACAATTAATTTACCTTCGCCATATCCAATCGAATTTCTCTTTGACCTCGATACAGTTCTCTCCGGAGCCGACGACCTCGGTTGCTGCCAGATCACCCCTTCCGATTCTCCCGTGGCGGATTTCCCGACGGTTGTGGCCGATGTTTGTGCCGTTTGTTTAGACGATTTCCACCCAGATGAAGCCGGTAAACAAATACCCTGCGGACACGTGTACCATGAGTCTTGTATTTCCTCCTGGCTTACCGTTGCCGACTGTTGCCCTCTCTGTCGGTGCCTTGTCGCTGGCCAACCGCCGGATTCAACTTTGATCCGACGGTAG

Protein sequence

MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR*

Homology

[Close]

BLAST of CSPI02G00880 vs. ExPASy Swiss-Prot
Match: Q9VHI7 (E3 ubiquitin-protein ligase Iruka OS=Drosophila melanogaster OX=7227 GN=Iru PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09
Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 59  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDS 111
           C++C DDF  DE  +++PC H+YHE+CI  WL +   CP+CR  +A    D+
Sbjct: 253 CSICWDDFKIDETVRKLPCSHLYHENCIVPWLNLHSTCPICRKSLADDGNDA 304

[Close]

BLAST of CSPI02G00880 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.9e-09
Identity = 23/51 (45.10%), Postives = 32/51 (62.75%), Query Frame = 0


Query: 59  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD 110
           CAVC+DDF      KQ+PC H+YH+ C+  WL + + CP+CR  +    PD
Sbjct: 224 CAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPD 274

[Close]

BLAST of CSPI02G00880 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-08
Identity = 22/51 (43.14%), Postives = 32/51 (62.75%), Query Frame = 0


Query: 59  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD 110
           CAVC+D+F      KQ+PC HV+H+ C+  WL + + CP+CR  +    PD
Sbjct: 216 CAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPD 266

[Close]

BLAST of CSPI02G00880 vs. ExPASy Swiss-Prot
Match: Q9SPL2 (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana OX=3702 GN=CIP8 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.3e-08
Identity = 23/43 (53.49%), Postives = 27/43 (62.79%), Query Frame = 0


Query: 58  VCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR 101
           VCAVC D     E GK++PCGH YH  CI  WL   + CP+CR
Sbjct: 256 VCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCR 298

[Close]

BLAST of CSPI02G00880 vs. ExPASy Swiss-Prot
Match: Q9Y4L5 (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 3.3e-08
Identity = 24/53 (45.28%), Postives = 34/53 (64.15%), Query Frame = 0


Query: 59  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDST 112
           C VC +D+  +E  +Q+PC H +H SCI  WL + D CP+CR  + G+  DST
Sbjct: 228 CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGE--DST 278

[Close]

BLAST of CSPI02G00880 vs. ExPASy TrEMBL
Match: A0A0A0LKR7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000930 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 3.7e-63
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCA 60
           MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCA
Sbjct: 1   MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCA 60

Query: 61  VCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR 116
           VCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR
Sbjct: 61  VCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR 115

[Close]

BLAST of CSPI02G00880 vs. ExPASy TrEMBL
Match: A0A5A7V2P4 (RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00540 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.3e-59
Identity = 111/116 (95.69%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 1   MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGC-CQITPSDSPVADFPTVVADVC 60
           MAAAAVMTEPT+ LPSPYPIEFLFDLDTVLSGADDL C CQITPSDSPVADFPTVVADVC
Sbjct: 1   MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVC 60

Query: 61  AVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR 116
           AVCLDDF PDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR
Sbjct: 61  AVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR 116

[Close]

BLAST of CSPI02G00880 vs. ExPASy TrEMBL
Match: A0A1S4DZX3 (RING-H2 finger protein ATL5-like OS=Cucumis melo OX=3656 GN=LOC107991276 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.3e-59
Identity = 111/116 (95.69%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 1   MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGC-CQITPSDSPVADFPTVVADVC 60
           MAAAAVMTEPT+ LPSPYPIEFLFDLDTVLSGADDL C CQITPSDSPVADFPTVVADVC
Sbjct: 1   MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVC 60

Query: 61  AVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR 116
           AVCLDDF PDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR
Sbjct: 61  AVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR 116

[Close]

BLAST of CSPI02G00880 vs. ExPASy TrEMBL
Match: A0A6J1G511 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC111450796 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.9e-47
Identity = 93/118 (78.81%), Postives = 100/118 (84.75%), Query Frame = 0


Query: 1   MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCA 60
           MAA +V  E T NL + YPIEFLFDLD VLSGADD GCCQI+ SDS VAD PTVVADVCA
Sbjct: 1   MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGADDFGCCQISASDSLVADLPTVVADVCA 60

Query: 61  VCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD---STLIRR 116
           VCL+DF PDE GKQIPCGHVYHESCISSWL VA+CCPLCRCL+AGQPP+   STLIRR
Sbjct: 61  VCLEDFRPDEDGKQIPCGHVYHESCISSWLAVANCCPLCRCLIAGQPPESPSSTLIRR 118

[Close]

BLAST of CSPI02G00880 vs. ExPASy TrEMBL
Match: A0A6J1DM93 (E3 ubiquitin-protein ligase RHA1B-like OS=Momordica charantia OX=3673 GN=LOC111021870 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.4e-38
Identity = 81/116 (69.83%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 1   MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQIT---PSDSPVADFPTVVAD 60
           MAA AV+ E T NL + YP+E LFDLD VLSG DD GCC +T    SDS VAD PTVVAD
Sbjct: 1   MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVAD 60

Query: 61  VCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLI 114
           VCAVC +DF  DE GKQIPCGHVYHE CISSWL VADCCPLCR  V   PP ST I
Sbjct: 61  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTSI 116

[Close]

BLAST of CSPI02G00880 vs. NCBI nr
Match: KAE8651509.1 (hypothetical protein Csa_019434 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 7.7e-63
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCA 60
           MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCA
Sbjct: 1   MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCA 60

Query: 61  VCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR 116
           VCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR
Sbjct: 61  VCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR 115

[Close]

BLAST of CSPI02G00880 vs. NCBI nr
Match: XP_004150849.1 (E3 ubiquitin-protein ligase RNF181 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 7.7e-63
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCA 60
           MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCA
Sbjct: 1   MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCA 60

Query: 61  VCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR 116
           VCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR
Sbjct: 61  VCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR 115

[Close]

BLAST of CSPI02G00880 vs. NCBI nr
Match: XP_016901521.1 (PREDICTED: RING-H2 finger protein ATL5-like [Cucumis melo] >KAA0061530.1 RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa] >TYK10743.1 RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa])

HSP 1 Score: 237.3 bits (604), Expect = 6.8e-59
Identity = 111/116 (95.69%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 1   MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGC-CQITPSDSPVADFPTVVADVC 60
           MAAAAVMTEPT+ LPSPYPIEFLFDLDTVLSGADDL C CQITPSDSPVADFPTVVADVC
Sbjct: 1   MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVC 60

Query: 61  AVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR 116
           AVCLDDF PDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR
Sbjct: 61  AVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR 116

[Close]

BLAST of CSPI02G00880 vs. NCBI nr
Match: XP_038877422.1 (E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida])

HSP 1 Score: 216.9 bits (551), Expect = 9.5e-53
Identity = 101/115 (87.83%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCA 60
           MAAAAVMTEPT NLP+ YPIEFLFDLD VLSGADD GCCQI+ +DS VAD P VVADVCA
Sbjct: 1   MAAAAVMTEPTRNLPATYPIEFLFDLDMVLSGADDFGCCQISATDSLVADLPIVVADVCA 60

Query: 61  VCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLIRR 116
           VCL+DF PDEAGKQIPCGHVYHESCISSWLTVADCCPLCRC VAGQPPDSTLIRR
Sbjct: 61  VCLEDFLPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCHVAGQPPDSTLIRR 115

[Close]

BLAST of CSPI02G00880 vs. NCBI nr
Match: XP_022946863.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata])

HSP 1 Score: 197.6 bits (501), Expect = 6.0e-47
Identity = 93/118 (78.81%), Postives = 100/118 (84.75%), Query Frame = 0


Query: 1   MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQITPSDSPVADFPTVVADVCA 60
           MAA +V  E T NL + YPIEFLFDLD VLSGADD GCCQI+ SDS VAD PTVVADVCA
Sbjct: 1   MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGADDFGCCQISASDSLVADLPTVVADVCA 60

Query: 61  VCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD---STLIRR 116
           VCL+DF PDE GKQIPCGHVYHESCISSWL VA+CCPLCRCL+AGQPP+   STLIRR
Sbjct: 61  VCLEDFRPDEDGKQIPCGHVYHESCISSWLAVANCCPLCRCLIAGQPPESPSSTLIRR 118

[Close]

BLAST of CSPI02G00880 vs. TAIR 10
Match: AT1G68180.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-10
Identity = 24/53 (45.28%), Postives = 34/53 (64.15%), Query Frame = 0


Query: 48  VADFPTVVADVCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR 101
           + D   V   VCA+C ++F   E GK++ C H+YH SCI SWL + + CP+CR
Sbjct: 127 ITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICR 179

[Close]

BLAST of CSPI02G00880 vs. TAIR 10
Match: AT2G44330.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 8.1e-10
Identity = 26/56 (46.43%), Postives = 34/56 (60.71%), Query Frame = 0


Query: 59  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR--CLVAGQPPDSTL 113
           CA+C +DF   E+ +++PC H+YH  CI  WLT  + CPLCR    VA    DS L
Sbjct: 96  CAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCRVELPVASSEDDSGL 151

[Close]

BLAST of CSPI02G00880 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.4e-09
Identity = 22/51 (43.14%), Postives = 32/51 (62.75%), Query Frame = 0


Query: 59  CAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD 110
           CAVC+D+F      KQ+PC HV+H+ C+  WL + + CP+CR  +    PD
Sbjct: 216 CAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPD 266

[Close]

BLAST of CSPI02G00880 vs. TAIR 10
Match: AT5G64920.1 (COP1-interacting protein 8 )

HSP 1 Score: 59.3 bits (142), Expect = 2.4e-09
Identity = 23/43 (53.49%), Postives = 27/43 (62.79%), Query Frame = 0


Query: 58  VCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR 101
           VCAVC D     E GK++PCGH YH  CI  WL   + CP+CR
Sbjct: 256 VCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCR 298

[Close]

BLAST of CSPI02G00880 vs. TAIR 10
Match: AT3G60080.1 (RING/U-box superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 3.1e-09
Identity = 21/43 (48.84%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 58  VCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR 101
           +CAVC +DF   E+ +++PC H+YH  CI  WL+  + CPLCR
Sbjct: 168 LCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCR 210

The following BLAST results are available for this feature:

BLAST of CSPI02G00880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9VHI7	1.8e-09	44.23	E3 ubiquitin-protein ligase Iruka OS=Drosophila melanogaster OX=7227 GN=Iru PE=1...	[more]
P0CH30	3.9e-09	45.10	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q8LPN7	1.9e-08	43.14	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q9SPL2	3.3e-08	53.49	E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana OX=3702 GN=CIP8 PE=1 SV...	[more]
Q9Y4L5	3.3e-08	45.28	E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2	[more]

BLAST of CSPI02G00880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKR7	3.7e-63	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000930 P...	[more]
A0A5A7V2P4	3.3e-59	95.69	RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S4DZX3	3.3e-59	95.69	RING-H2 finger protein ATL5-like OS=Cucumis melo OX=3656 GN=LOC107991276 PE=4 SV...	[more]
A0A6J1G511	2.9e-47	78.81	E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1DM93	2.4e-38	69.83	E3 ubiquitin-protein ligase RHA1B-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CSPI02G00880 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651509.1	7.7e-63	100.00	hypothetical protein Csa_019434 [Cucumis sativus]	[more]
XP_004150849.1	7.7e-63	100.00	E3 ubiquitin-protein ligase RNF181 [Cucumis sativus]	[more]
XP_016901521.1	6.8e-59	95.69	PREDICTED: RING-H2 finger protein ATL5-like [Cucumis melo] >KAA0061530.1 RING-H2...	[more]
XP_038877422.1	9.5e-53	87.83	E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]	[more]
XP_022946863.1	6.0e-47	78.81	E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]	[more]

BLAST of CSPI02G00880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68180.1	1.6e-10	45.28	RING/U-box superfamily protein	[more]
AT2G44330.1	8.1e-10	46.43	RING/U-box superfamily protein	[more]
AT3G19950.1	1.4e-09	43.14	RING/U-box superfamily protein	[more]
AT5G64920.1	2.4e-09	53.49	COP1-interacting protein 8	[more]
AT3G60080.1	3.1e-09	48.84	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 59..99 e-value: 1.2E-6 score: 38.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 58..100 e-value: 2.1E-11 score: 44.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 59..100 score: 12.666314
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 53..111 e-value: 2.5E-16 score: 60.6
None	No IPR available	PANTHER	PTHR15710:SF74	E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE	coord: 21..103
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 21..103
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 58..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G00880.1	CSPI02G00880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity