CSPI02G00450 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G00450
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPolyamine oxidase 5
LocationChr2: 283026 .. 283505 (+)
RNA-Seq ExpressionCSPI02G00450
SyntenyCSPI02G00450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAATCGCGGAAGACCCATGACTTTGTTCGAACCGAGGCGTCCACGGAGAAGACGGAGGATATGGACGATGACATTCTGGCTTGGATTTCGTTGGAAGAAGAGACAGTAGGCGAACTCATGATGCTTCTGGATGACGAGGAGAAAAGCCGTCCGGTGGAGGAGAAAGTGAAGTTCATCGAGGATCCGTACTCATCGGCGGTGGTTTTTCAATCGTCTTCCTCGTACGTGACTATCAACGGAAACGAAGAGAGTTGCGGTTCATCTTTCTCTGAATCGGACTCGTCGATGATGGCGAGCGTGGACATGAACGGAGCGAGGATTAAAGTGATGGAAATCGATTGTGAAACTGTCGATAAATGGAAGATGTGGAGCGAGGAGAGGTTGATGAAGGAGGAAGAGGAAGTGTCGGGTGTATCGGAGGGAATCATGAGTTGGGATGAAGATGATTTAGCGAGGTTCATCGGCGACGAAGAA

mRNA sequence

ATGGAGGAATCGCGGAAGACCCATGACTTTGTTCGAACCGAGGCGTCCACGGAGAAGACGGAGGATATGGACGATGACATTCTGGCTTGGATTTCGTTGGAAGAAGAGACAGTAGGCGAACTCATGATGCTTCTGGATGACGAGGAGAAAAGCCGTCCGGTGGAGGAGAAAGTGAAGTTCATCGAGGATCCGTACTCATCGGCGGTGGTTTTTCAATCGTCTTCCTCGTACGTGACTATCAACGGAAACGAAGAGAGTTGCGGTTCATCTTTCTCTGAATCGGACTCGTCGATGATGGCGAGCGTGGACATGAACGGAGCGAGGATTAAAGTGATGGAAATCGATTGTGAAACTGTCGATAAATGGAAGATGTGGAGCGAGGAGAGGTTGATGAAGGAGGAAGAGGAAGTGTCGGGTGTATCGGAGGGAATCATGAGTTGGGATGAAGATGATTTAGCGAGGTTCATCGGCGACGAAGAA

Coding sequence (CDS)

ATGGAGGAATCGCGGAAGACCCATGACTTTGTTCGAACCGAGGCGTCCACGGAGAAGACGGAGGATATGGACGATGACATTCTGGCTTGGATTTCGTTGGAAGAAGAGACAGTAGGCGAACTCATGATGCTTCTGGATGACGAGGAGAAAAGCCGTCCGGTGGAGGAGAAAGTGAAGTTCATCGAGGATCCGTACTCATCGGCGGTGGTTTTTCAATCGTCTTCCTCGTACGTGACTATCAACGGAAACGAAGAGAGTTGCGGTTCATCTTTCTCTGAATCGGACTCGTCGATGATGGCGAGCGTGGACATGAACGGAGCGAGGATTAAAGTGATGGAAATCGATTGTGAAACTGTCGATAAATGGAAGATGTGGAGCGAGGAGAGGTTGATGAAGGAGGAAGAGGAAGTGTCGGGTGTATCGGAGGGAATCATGAGTTGGGATGAAGATGATTTAGCGAGGTTCATCGGCGACGAAGAA

Protein sequence

MEESRKTHDFVRTEASTEKTEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVEEKVKFIEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEIDCETVDKWKMWSEERLMKEEEEVSGVSEGIMSWDEDDLARFIGDEE
Homology
BLAST of CSPI02G00450 vs. ExPASy TrEMBL
Match: A0A0A0LIN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000450 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.3e-79
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0

Query: 1   MEESRKTHDFVRTEASTEKTEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVEEKVKF 60
           MEESRKTHDFVRTEASTEKTEDMDDDILAWISLE+ETVGELMMLLDDEEKSRPVEEKVKF
Sbjct: 1   MEESRKTHDFVRTEASTEKTEDMDDDILAWISLEDETVGELMMLLDDEEKSRPVEEKVKF 60

Query: 61  IEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEIDCETVD 120
           IEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEIDCETVD
Sbjct: 61  IEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEIDCETVD 120

Query: 121 KWKMWSEERLMKEEEEVSGVSEGIMSWDEDDLARFIGDEE 161
           KWKMWSEERLMKEEEEVSGVSEGIMSWDEDDLARFIGDEE
Sbjct: 121 KWKMWSEERLMKEEEEVSGVSEGIMSWDEDDLARFIGDEE 160

BLAST of CSPI02G00450 vs. ExPASy TrEMBL
Match: A0A5A7UZZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00520 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.3e-70
Identity = 148/167 (88.62%), Postives = 155/167 (92.81%), Query Frame = 0

Query: 1   MEESRKTHDFVRTEASTEK-----TEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
           MEESR TH+FVRTEASTEK      EDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE
Sbjct: 1   MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60

Query: 61  EKVKFIEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
           EKVKFIEDPYSSAV+FQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID
Sbjct: 61  EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120

Query: 121 CETVDKWKMWSEERLMK--EEEEVSGVSEGIMSWDEDDLARFIGDEE 161
            ETV+KWKMWSE+ LMK  EEEEVSGV +GI+SWDEDDLARF+GDEE
Sbjct: 121 SETVEKWKMWSEDGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEE 167

BLAST of CSPI02G00450 vs. ExPASy TrEMBL
Match: A0A1S3CB71 (uncharacterized protein LOC103498512 OS=Cucumis melo OX=3656 GN=LOC103498512 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.3e-70
Identity = 148/167 (88.62%), Postives = 155/167 (92.81%), Query Frame = 0

Query: 1   MEESRKTHDFVRTEASTEK-----TEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
           MEESR TH+FVRTEASTEK      EDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE
Sbjct: 1   MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60

Query: 61  EKVKFIEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
           EKVKFIEDPYSSAV+FQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID
Sbjct: 61  EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120

Query: 121 CETVDKWKMWSEERLMK--EEEEVSGVSEGIMSWDEDDLARFIGDEE 161
            ETV+KWKMWSE+ LMK  EEEEVSGV +GI+SWDEDDLARF+GDEE
Sbjct: 121 SETVEKWKMWSEDGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEE 167

BLAST of CSPI02G00450 vs. ExPASy TrEMBL
Match: A0A5D3CG58 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00940 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 5.7e-70
Identity = 148/167 (88.62%), Postives = 154/167 (92.22%), Query Frame = 0

Query: 1   MEESRKTHDFVRTEASTEK-----TEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
           MEESR TH+FVRTEASTEK      EDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE
Sbjct: 1   MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60

Query: 61  EKVKFIEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
           EKVKFIEDPYSSAV+FQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID
Sbjct: 61  EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120

Query: 121 CETVDKWKMWSEERLMK--EEEEVSGVSEGIMSWDEDDLARFIGDEE 161
            ETV+KWKMWSE  LMK  EEEEVSGV +GI+SWDEDDLARF+GDEE
Sbjct: 121 SETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEE 167

BLAST of CSPI02G00450 vs. ExPASy TrEMBL
Match: A0A6J1HN50 (uncharacterized protein LOC111465706 OS=Cucurbita maxima OX=3661 GN=LOC111465706 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.4e-54
Identity = 123/167 (73.65%), Postives = 138/167 (82.63%), Query Frame = 0

Query: 1   MEESRKTHDFVRTEASTEK-------TEDMDDDILAWISLEEETVGELMMLLDDEEKSRP 60
           MEE+RK HDFV  E ST+K        ED+ +DILAWIS+EEETVGELMMLLDD EKSRP
Sbjct: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60

Query: 61  VEEKVKFIEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVME 120
           + EKVKFI+DPYSSA++FQSSSS+VTINGNEESCGSSFSESDSS+MASVDMNGARIK+ME
Sbjct: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120

Query: 121 IDCETVDKWKMWSEERLMKEEEEVSGVSEGIMSWDEDDLARFIGDEE 161
           ID  TV+KWK+W       + EE S VSEG  SWDEDDLARFIGDEE
Sbjct: 121 IDSATVEKWKLW-------KTEEASSVSEG-FSWDEDDLARFIGDEE 159

BLAST of CSPI02G00450 vs. NCBI nr
Match: XP_011648606.2 (uncharacterized protein LOC105434536 [Cucumis sativus] >KGN60561.2 hypothetical protein Csa_019291 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 4.8e-79
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0

Query: 1   MEESRKTHDFVRTEASTEKTEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVEEKVKF 60
           MEESRKTHDFVRTEASTEKTEDMDDDILAWISLE+ETVGELMMLLDDEEKSRPVEEKVKF
Sbjct: 36  MEESRKTHDFVRTEASTEKTEDMDDDILAWISLEDETVGELMMLLDDEEKSRPVEEKVKF 95

Query: 61  IEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEIDCETVD 120
           IEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEIDCETVD
Sbjct: 96  IEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEIDCETVD 155

Query: 121 KWKMWSEERLMKEEEEVSGVSEGIMSWDEDDLARFIGDEE 161
           KWKMWSEERLMKEEEEVSGVSEGIMSWDEDDLARFIGDEE
Sbjct: 156 KWKMWSEERLMKEEEEVSGVSEGIMSWDEDDLARFIGDEE 195

BLAST of CSPI02G00450 vs. NCBI nr
Match: XP_008459356.1 (PREDICTED: uncharacterized protein LOC103498512 [Cucumis melo] >KAA0061492.1 uncharacterized protein E6C27_scaffold41G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 274.2 bits (700), Expect = 6.9e-70
Identity = 148/167 (88.62%), Postives = 155/167 (92.81%), Query Frame = 0

Query: 1   MEESRKTHDFVRTEASTEK-----TEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
           MEESR TH+FVRTEASTEK      EDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE
Sbjct: 1   MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60

Query: 61  EKVKFIEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
           EKVKFIEDPYSSAV+FQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID
Sbjct: 61  EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120

Query: 121 CETVDKWKMWSEERLMK--EEEEVSGVSEGIMSWDEDDLARFIGDEE 161
            ETV+KWKMWSE+ LMK  EEEEVSGV +GI+SWDEDDLARF+GDEE
Sbjct: 121 SETVEKWKMWSEDGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEE 167

BLAST of CSPI02G00450 vs. NCBI nr
Match: TYK10781.1 (uncharacterized protein E5676_scaffold332G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 273.5 bits (698), Expect = 1.2e-69
Identity = 148/167 (88.62%), Postives = 154/167 (92.22%), Query Frame = 0

Query: 1   MEESRKTHDFVRTEASTEK-----TEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60
           MEESR TH+FVRTEASTEK      EDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE
Sbjct: 1   MEESRNTHEFVRTEASTEKRQRPAAEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVE 60

Query: 61  EKVKFIEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120
           EKVKFIEDPYSSAV+FQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID
Sbjct: 61  EKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEID 120

Query: 121 CETVDKWKMWSEERLMK--EEEEVSGVSEGIMSWDEDDLARFIGDEE 161
            ETV+KWKMWSE  LMK  EEEEVSGV +GI+SWDEDDLARF+GDEE
Sbjct: 121 SETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEE 167

BLAST of CSPI02G00450 vs. NCBI nr
Match: XP_038890889.1 (uncharacterized protein LOC120080324 [Benincasa hispida])

HSP 1 Score: 245.7 bits (626), Expect = 2.6e-61
Identity = 135/168 (80.36%), Postives = 147/168 (87.50%), Query Frame = 0

Query: 1   MEESRKTHDFVRTEASTEK--------TEDMDDDILAWISLEEETVGELMMLLDDEEKSR 60
           M+ESRK H+FV  EASTEK         ED+DDDILAWIS+EEETVGELMMLLDD EKSR
Sbjct: 1   MDESRKRHEFVPPEASTEKRPRVAVKEAEDVDDDILAWISVEEETVGELMMLLDDVEKSR 60

Query: 61  PVEEKVKFIEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVM 120
           P+EEKVKFI+DPYSSAV+FQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIK+M
Sbjct: 61  PMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKLM 120

Query: 121 EIDCETVDKWKMWSEERLMKEEEEVSGVSEGIMSWDEDDLARFIGDEE 161
           EID ETV+KWK+WSE+RL KEEEE S V +G   WDEDDLARFIGDEE
Sbjct: 121 EIDSETVEKWKLWSEDRL-KEEEETSAVLDG-FCWDEDDLARFIGDEE 166

BLAST of CSPI02G00450 vs. NCBI nr
Match: KAG6586479.1 (hypothetical protein SDJN03_19212, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021338.1 hypothetical protein SDJN02_18027, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 222.2 bits (565), Expect = 3.1e-54
Identity = 123/167 (73.65%), Postives = 139/167 (83.23%), Query Frame = 0

Query: 1   MEESRKTHDFVRTEASTEK-------TEDMDDDILAWISLEEETVGELMMLLDDEEKSRP 60
           MEE+RK HDFV  E ST+K        ED+ +DILAWIS+EEETVGELMMLLDD EKSRP
Sbjct: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60

Query: 61  VEEKVKFIEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVME 120
           + EKVKFI+DPYSSA++FQSSSS+VTINGNEESCGSSFSESDSS+MASVDMNGARIK+ME
Sbjct: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120

Query: 121 IDCETVDKWKMWSEERLMKEEEEVSGVSEGIMSWDEDDLARFIGDEE 161
           ID  TV+KWK+W       + EEVS +SEG  SWDEDDLARFIGDEE
Sbjct: 121 IDSATVEKWKLW-------KSEEVSSISEG-SSWDEDDLARFIGDEE 159

BLAST of CSPI02G00450 vs. TAIR 10
Match: AT5G56880.1 (unknown protein; Has 9 Blast hits to 9 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-13
Identity = 63/171 (36.84%), Postives = 85/171 (49.71%), Query Frame = 0

Query: 1   MEESRKTHDFVRTEASTEKTEDMDDDILAWISLEEETVGELMMLLDDEEKSRPVEE---- 60
           MEE R   D    + +T K       +L     +E T  E+M L++    +    E    
Sbjct: 1   MEEMRNKVD-ENGKNTTAKEVTKKTTMLVAGEYDEYTPDEIMSLVESSSPTMTTTEIEGT 60

Query: 61  --------KVKFIEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGAR 120
                   +V+FI+DPY+  VV QSSS Y+TIN NEESCG SFS+SDSS+MASVD +G  
Sbjct: 61  NFSGEGSFRVRFIDDPYAMPVVVQSSSGYITINVNEESCGPSFSDSDSSVMASVDASGLF 120

Query: 121 IKVMEIDCETVDKWKMWSEERLMKEEEEVSGVSEGIMSWDEDDLARFIGDE 160
               E   E   K   WS   +   E E          W++D LARF+G++
Sbjct: 121 GCCFEYGNE---KGGAWSTNEVRASEYE----------WNDDMLARFLGED 157

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LIN02.3e-7999.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000450 PE=4 SV=1[more]
A0A5A7UZZ93.3e-7088.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3CB713.3e-7088.62uncharacterized protein LOC103498512 OS=Cucumis melo OX=3656 GN=LOC103498512 PE=... [more]
A0A5D3CG585.7e-7088.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1HN503.4e-5473.65uncharacterized protein LOC111465706 OS=Cucurbita maxima OX=3661 GN=LOC111465706... [more]
Match NameE-valueIdentityDescription
XP_011648606.24.8e-7999.38uncharacterized protein LOC105434536 [Cucumis sativus] >KGN60561.2 hypothetical ... [more]
XP_008459356.16.9e-7088.62PREDICTED: uncharacterized protein LOC103498512 [Cucumis melo] >KAA0061492.1 unc... [more]
TYK10781.11.2e-6988.62uncharacterized protein E5676_scaffold332G00940 [Cucumis melo var. makuwa][more]
XP_038890889.12.6e-6180.36uncharacterized protein LOC120080324 [Benincasa hispida][more]
KAG6586479.13.1e-5473.65hypothetical protein SDJN03_19212, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT5G56880.11.7e-1336.84unknown protein; Has 9 Blast hits to 9 proteins in 5 species: Archae - 0; Bacter... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR37265OS01G0195300 PROTEINcoord: 12..160
NoneNo IPR availablePANTHERPTHR37265:SF5BNACNNG68970D PROTEINcoord: 12..160

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G00450.1CSPI02G00450.1mRNA