CSPI01G34490 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G34490
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 29405753 .. 29405991 (+)
RNA-Seq ExpressionCSPI01G34490
SyntenyCSPI01G34490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACTCTAAGTTGAAGGCTCTCCATGTAGAATCTGATGCCCTTAAAGTGCTGATGCTATTCAACTTTGAAGTTGTTGATCTCATAGAAACCAACAACATTATTATTGTAGATGAAATATTGATATCTTTGCATACACAGTATATCTTCAATGTATTTCTCATTTCGAGTTGTTGTCTAGGGAAGGTGTTGGGCATAGTCTTGCTCGGATTTTTGCTGAGGTTGGGGATGAGCAGCTT

mRNA sequence

ATGCACTCTAAGTTGAAGGCTCTCCATGTAGAATCTGATGCCCTTAAAGTGCTGATGCTATTCAACTTTGAAGTTGTTGATCTCATAGAAACCAACAACATTATTATTGTAGATGAAATATTGATATCTTTGCATACACAGGAAGGTGTTGGGCATAGTCTTGCTCGGATTTTTGCTGAGGTTGGGGATGAGCAGCTT

Coding sequence (CDS)

ATGCACTCTAAGTTGAAGGCTCTCCATGTAGAATCTGATGCCCTTAAAGTGCTGATGCTATTCAACTTTGAAGTTGTTGATCTCATAGAAACCAACAACATTATTATTGTAGATGAAATATTGATATCTTTGCATACACAGGAAGGTGTTGGGCATAGTCTTGCTCGGATTTTTGCTGAGGTTGGGGATGAGCAGCTT

Protein sequence

MHSKLKALHVESDALKVLMLFNFEVVDLIETNNIIIVDEILISLHTQEGVGHSLARIFAEVGDEQL
Homology
[Close]
BLAST of CSPI01G34490 vs. ExPASy TrEMBL
Match: A0A0A0M179 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G702020 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 1  MHSKLKALHVESDALKVLMLFNFEVVDLIETNNIIIVDEILISLHTQ 48
          MHSKLKALHVESDALKVLMLFNFEVVDLIETNNIIIVDEILISLHTQ
Sbjct: 1  MHSKLKALHVESDALKVLMLFNFEVVDLIETNNIIIVDEILISLHTQ 47

[Close]
BLAST of CSPI01G34490 vs. NCBI nr
Match: KGN66877.1 (hypothetical protein Csa_007680 [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 2.2e-14
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 1  MHSKLKALHVESDALKVLMLFNFEVVDLIETNNIIIVDEILISLHTQ 48
          MHSKLKALHVESDALKVLMLFNFEVVDLIETNNIIIVDEILISLHTQ
Sbjct: 1  MHSKLKALHVESDALKVLMLFNFEVVDLIETNNIIIVDEILISLHTQ 47

The following BLAST results are available for this feature:
BLAST of CSPI01G34490 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G34490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M1791.1e-14100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G702020 PE=4 SV=1[more]
BLAST of CSPI01G34490 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66877.12.2e-14100.00hypothetical protein Csa_007680 [Cucumis sativus][more]
BLAST of CSPI01G34490 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G34490.1CSPI01G34490.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane