CSPI01G34120 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G34120
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 29041892 .. 29042279 (+)
RNA-Seq ExpressionCSPI01G34120
SyntenyCSPI01G34120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCAACAAAGTGGTGGAGAAAAAGAAAAGAAATCTTCATTTTTTTTCTTTTTTGGGTCTTCTAAACTTGATTCTAGTTATAGGAAGGAAGAAATTTTATCATTATCATCATTATCATAACTGGGTTCCTAAGTTAATGTCCATACATGGGCCAAAATTTCTTTTTGGTTAAATAAATGGGCAAAAAACCCTAACTTGAGGAGATGGGAGACGACGGGCGAGTTCGATGGGCGACGATAGCCAATGACAAAGACGTTCAGAGATGGTCGGTTGCGTTTCAAGTGGTTGAGTTTGTTCGAATATTGTCGGCGGCGTTCGGTGGCATTCGAAGCTGTTCGATGGTCTACGAGCGTTTTCGGAGAGGATGAGAGTGTGAGAAAGGCTTAGGG

mRNA sequence

GTCAACAAAGTGGTGGAGAAAAAGAAAAGAAATCTTCATTTTTTTTCTTTTTTGGGTCTTCTAAACTTGATTCTAGTTATAGGAAGGAAGAAATTTTATCATTATCATCATTATCATAACTGGGTTCCTAAGTTAATGTCCATACATGGGCCAAAATTTCTTTTTGGTTAAATAAATGGGCAAAAAACCCTAACTTGAGGAGATGGGAGACGACGGGCGAGTTCGATGGGCGACGATAGCCAATGACAAAGACGTTCAGAGATGGTCGGTTGCGTTTCAAGTGGTTGAGTTTGTTCGAATATTGTCGGCGGCGTTCGGTGGCATTCGAAGCTGTTCGATGGTCTACGAGCGTTTTCGGAGAGGATGAGAGTGTGAGAAAGGCTTAGGG

Coding sequence (CDS)

ATGGGAGACGACGGGCGAGTTCGATGGGCGACGATAGCCAATGACAAAGACGTTCAGAGATGGTCGGTTGCGTTTCAAGTGGTTGAGTTTGTTCGAATATTGTCGGCGGCGTTCGGTGGCATTCGAAGCTGTTCGATGGTCTACGAGCGTTTTCGGAGAGGATGA

Protein sequence

MGDDGRVRWATIANDKDVQRWSVAFQVVEFVRILSAAFGGIRSCSMVYERFRRG*
Homology
[Close]
BLAST of CSPI01G34120 vs. ExPASy TrEMBL
Match: A0A0A0LYH5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G700650 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.6e-22
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MGDDGRVRWATIANDKDVQRWSVAFQVVEFVRILSAAFGGIRSCSMVYERFRRG 55
          MGDDGRVRWATIANDKDVQRWSVAF+VVEFVRILSAAFGGIRSCSMVYERFRRG
Sbjct: 1  MGDDGRVRWATIANDKDVQRWSVAFEVVEFVRILSAAFGGIRSCSMVYERFRRG 54

[Close]
BLAST of CSPI01G34120 vs. NCBI nr
Match: KGN66838.1 (hypothetical protein Csa_007543 [Cucumis sativus])

HSP 1 Score: 113.6 bits (283), Expect = 5.4e-22
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MGDDGRVRWATIANDKDVQRWSVAFQVVEFVRILSAAFGGIRSCSMVYERFRRG 55
          MGDDGRVRWATIANDKDVQRWSVAF+VVEFVRILSAAFGGIRSCSMVYERFRRG
Sbjct: 1  MGDDGRVRWATIANDKDVQRWSVAFEVVEFVRILSAAFGGIRSCSMVYERFRRG 54

The following BLAST results are available for this feature:
BLAST of CSPI01G34120 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G34120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYH52.6e-2298.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G700650 PE=4 SV=1[more]
BLAST of CSPI01G34120 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66838.15.4e-2298.15hypothetical protein Csa_007543 [Cucumis sativus][more]
BLAST of CSPI01G34120 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G34120.1CSPI01G34120.1mRNA