CSPI01G33670 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G33670
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 28631147 .. 28631389 (+)
RNA-Seq ExpressionCSPI01G33670
SyntenyCSPI01G33670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGGAGGTTTGCAGGGAGTTGGCTTCATCCCATGTTTGCCGGAAATCCCATCCCCAAGTCTCAAAGTTTCCAGAGAAGCACAAAACGGCTATCAGTGACGATGAAGAAGTCGAAAGATCAAATTTAATGAAGACTGAGAAAGTTTCGGTCAAGCCAAAACTGTTGCCCAATAAGAAATCAAAGGAAGTTGAGAAGGTCTTCAAGGAGGACAGAGAAAGGAGTAGACAATATAATTAG

mRNA sequence

ATGGAAAAGGAGGTTTGCAGGGAGTTGGCTTCATCCCATGTTTGCCGGAAATCCCATCCCCAAGTCTCAAAGTTTCCAGAGAAGCACAAAACGGCTATCAGTGACGATGAAGAAGTCGAAAGATCAAATTTAATGAAGACTGAGAAAGTTTCGGTCAAGCCAAAACTGTTGCCCAATAAGAAATCAAAGGAAGTTGAGAAGGTCTTCAAGGAGGACAGAGAAAGGAGTAGACAATATAATTAG

Coding sequence (CDS)

ATGGAAAAGGAGGTTTGCAGGGAGTTGGCTTCATCCCATGTTTGCCGGAAATCCCATCCCCAAGTCTCAAAGTTTCCAGAGAAGCACAAAACGGCTATCAGTGACGATGAAGAAGTCGAAAGATCAAATTTAATGAAGACTGAGAAAGTTTCGGTCAAGCCAAAACTGTTGCCCAATAAGAAATCAAAGGAAGTTGAGAAGGTCTTCAAGGAGGACAGAGAAAGGAGTAGACAATATAATTAG

Protein sequence

MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEEVERSNLMKTEKVSVKPKLLPNKKSKEVEKVFKEDRERSRQYN*
Homology
[Close]
BLAST of CSPI01G33670 vs. ExPASy TrEMBL
Match: A0A0A0M3I8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690330 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.3e-34
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 1   MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEEVERSNLMKTEKVSVKPKLLPNK 60
           MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEE+ERSNLMKTEKVSVKPKLLPNK
Sbjct: 87  MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEEIERSNLMKTEKVSVKPKLLPNK 146

Query: 61  KSKEVEKVFKEDRERSRQYN 81
           KSKEVEKVFKEDRERSRQYN
Sbjct: 147 KSKEVEKVFKEDRERSRQYN 166

[Close]
BLAST of CSPI01G33670 vs. NCBI nr
Match: KAE8637489.1 (hypothetical protein CSA_016971 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 7.1e-31
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEEVERSNLMKTEKVSVKPKLLPNK 60
          MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEE+ERSNLMKTEKVSVKPKLLPNK
Sbjct: 1  MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEEIERSNLMKTEKVSVKPKLLPNK 60

Query: 61 KSKEVEKVFKEDRER 76
          KSKEVEKVFKEDRER
Sbjct: 61 KSKEVEKVFKEDRER 75

[Close]
BLAST of CSPI01G33670 vs. NCBI nr
Match: KAE8653625.1 (hypothetical protein Csa_007524 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-26
Identity = 70/79 (88.61%), Postives = 74/79 (93.67%), Query Frame = 0 

Query: 1  MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEEVERSNLMKTEKVSVKPKLLPNK 60
          MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEE+ERSNLMKTEKVSVKPKLLPNK
Sbjct: 1  MEKEVCRELASSHVCRKSHPQVSKFPEKHKTAISDDEEIERSNLMKTEKVSVKPKLLPNK 60

Query: 61 KSKEVEKVFK--EDRERSR 78
          KSKEVEK++   + RE SR
Sbjct: 61 KSKEVEKLYSLFKAREVSR 79

The following BLAST results are available for this feature:
BLAST of CSPI01G33670 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G33670 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M3I83.3e-3498.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690330 PE=4 SV=1[more]
BLAST of CSPI01G33670 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8637489.17.1e-3198.67hypothetical protein CSA_016971 [Cucumis sativus][more]
KAE8653625.11.1e-2688.61hypothetical protein Csa_007524 [Cucumis sativus][more]
BLAST of CSPI01G33670 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..58

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G33670.1CSPI01G33670.1mRNA