CSPI01G31960 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G31960
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionStress response protein NST1-like
LocationChr1: 26678271 .. 26678528 (+)
RNA-Seq ExpressionCSPI01G31960
SyntenyCSPI01G31960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCAAGAAGAAGCCATTTACCATTATTTCACAGACCTGAAGTCAAGGATGGGCAGGATAAGGCTTGATGATGGTGTCCCACCGAAGTACAAACACATGAAGCATTATGCAAGCAAAATAGATTTAAGAGTAGGAGAACCAAGTGAGAAAGAAGAAATTAAGGTCCTTACAAAATACTTTGATAAGGTAAAGAAGTTCATTAAGGAGCTAGAAGTGGAAGAAAAGAAGAAGAAAGGGGAGGAAAGAAAAAGAATA

mRNA sequence

ATGAGGCAAGAAGAAGCCATTTACCATTATTTCACAGACCTGAAGTCAAGGATGGGCAGGATAAGGCTTGATGATGGTGTCCCACCGAAGTACAAACACATGAAGCATTATGCAAGCAAAATAGATTTAAGAGTAGGAGAACCAAGTGAGAAAGAAGAAATTAAGGTCCTTACAAAATACTTTGATAAGGTAAAGAAGTTCATTAAGGAGCTAGAAGTGGAAGAAAAGAAGAAGAAAGGGGAGGAAAGAAAAAGAATA

Coding sequence (CDS)

ATGAGGCAAGAAGAAGCCATTTACCATTATTTCACAGACCTGAAGTCAAGGATGGGCAGGATAAGGCTTGATGATGGTGTCCCACCGAAGTACAAACACATGAAGCATTATGCAAGCAAAATAGATTTAAGAGTAGGAGAACCAAGTGAGAAAGAAGAAATTAAGGTCCTTACAAAATACTTTGATAAGGTAAAGAAGTTCATTAAGGAGCTAGAAGTGGAAGAAAAGAAGAAGAAAGGGGAGGAAAGAAAAAGAATA

Protein sequence

MRQEEAIYHYFTDLKSRMGRIRLDDGVPPKYKHMKHYASKIDLRVGEPSEKEEIKVLTKYFDKVKKFIKELEVEEKKKKGEERKRI
Homology
BLAST of CSPI01G31960 vs. ExPASy TrEMBL
Match: A0A0A0LXZ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G652210 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.0e-33
Identity = 80/86 (93.02%), Postives = 81/86 (94.19%), Query Frame = 0

Query: 1  MRQEEAIYHYFTDLKSRMGRIRLDDGVPPKYKHMKHYASKIDLRVGEPSEKEEIKVLTKY 60
          MRQEEAIYH FTDL+SRMGRIRLDDGVPPKYKHMKHYASKIDLRVG PSEKEEIKV TKY
Sbjct: 1  MRQEEAIYHDFTDLESRMGRIRLDDGVPPKYKHMKHYASKIDLRVGGPSEKEEIKVPTKY 60

Query: 61 FDKVKKFIKELEVEEKKKKGEERKRI 87
           DKVKKFIKELEVEEKKKK EERKRI
Sbjct: 61 SDKVKKFIKELEVEEKKKKEEERKRI 86

BLAST of CSPI01G31960 vs. ExPASy TrEMBL
Match: A0A5D3BXZ2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00240 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-05
Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 0

Query: 1   MRQEEAIYHYFTDLKSRMGRIRLDDGVPPKYKHMKHYASKIDLRVGEPSEKEEIKVLTKY 60
           MRQ+E+IYH  TDLKSRMG +RLDD   P+YKH+KH A K   R  +  E++E   L + 
Sbjct: 44  MRQDESIYHGLTDLKSRMGIMRLDDD-QPRYKHLKHGAEKERRRKEKGHEEDE--SLRQV 103

Query: 61  FDKVKKFIKEL--------EVEEKKKKGEE 83
           F + KK +K L        E++  KKK +E
Sbjct: 104 FKEKKKNVKSLAETKTKLSEIQTAKKKKQE 130

BLAST of CSPI01G31960 vs. ExPASy TrEMBL
Match: A0A5A7SPX0 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43053G00410 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.5e-05
Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 0

Query: 28  PPKYKHMKHYASKIDLRVGEPSEKEEIKVLTKYFDKVKKFIKELEVEEK--KKKGEERK 85
           P KYKH+KH   K+ LR GEP+EKE I+V  K+FDK+ KFIKELE  E+  +K G E +
Sbjct: 47  PSKYKHVKHRNGKVTLRSGEPNEKEGIEVPVKFFDKIIKFIKELEAPERASEKCGNEEQ 105

BLAST of CSPI01G31960 vs. NCBI nr
Match: KGN66638.1 (hypothetical protein Csa_007234 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 6.2e-33
Identity = 80/86 (93.02%), Postives = 81/86 (94.19%), Query Frame = 0

Query: 1  MRQEEAIYHYFTDLKSRMGRIRLDDGVPPKYKHMKHYASKIDLRVGEPSEKEEIKVLTKY 60
          MRQEEAIYH FTDL+SRMGRIRLDDGVPPKYKHMKHYASKIDLRVG PSEKEEIKV TKY
Sbjct: 1  MRQEEAIYHDFTDLESRMGRIRLDDGVPPKYKHMKHYASKIDLRVGGPSEKEEIKVPTKY 60

Query: 61 FDKVKKFIKELEVEEKKKKGEERKRI 87
           DKVKKFIKELEVEEKKKK EERKRI
Sbjct: 61 SDKVKKFIKELEVEEKKKKEEERKRI 86

BLAST of CSPI01G31960 vs. NCBI nr
Match: KAA0052868.1 (stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 3.2e-05
Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 0

Query: 1   MRQEEAIYHYFTDLKSRMGRIRLDDGVPPKYKHMKHYASKIDLRVGEPSEKEEIKVLTKY 60
           MRQ+E+IYH  TDLKSRMG +RLDD   P+YKH+KH A K   R  +  E++E   L + 
Sbjct: 44  MRQDESIYHGLTDLKSRMGIMRLDDD-QPRYKHLKHGAEKERRRKEKGHEEDE--SLRQV 103

Query: 61  FDKVKKFIKEL--------EVEEKKKKGEE 83
           F + KK +K L        E++  KKK +E
Sbjct: 104 FKEKKKNVKSLAETKTKLSEIQTAKKKKQE 130

BLAST of CSPI01G31960 vs. NCBI nr
Match: KAA0032578.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 9.3e-05
Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 0

Query: 28  PPKYKHMKHYASKIDLRVGEPSEKEEIKVLTKYFDKVKKFIKELEVEEK--KKKGEERK 85
           P KYKH+KH   K+ LR GEP+EKE I+V  K+FDK+ KFIKELE  E+  +K G E +
Sbjct: 47  PSKYKHVKHRNGKVTLRSGEPNEKEGIEVPVKFFDKIIKFIKELEAPERASEKCGNEEQ 105

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LXZ83.0e-3393.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G652210 PE=4 SV=1[more]
A0A5D3BXZ21.5e-0545.56Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7SPX04.5e-0555.93Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
Match NameE-valueIdentityDescription
KGN66638.16.2e-3393.02hypothetical protein Csa_007234 [Cucumis sativus][more]
KAA0052868.13.2e-0545.56stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress ... [more]
KAA0032578.19.3e-0555.93stress response protein NST1-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G31960.1CSPI01G31960.1mRNA