CSPI01G29380 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G29380
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protochlorophyllide-dependent translocon component 52, chloroplastic-like
Location	Chr1: 23849368 .. 23862595 (+)
RNA-Seq Expression	CSPI01G29380
Synteny	CSPI01G29380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGTGTACCATGGATGGTGCTTCAATGGCTCGGGTGATTGTAAATTCATCCCCCAAGCGCCCCCTGATGGCCCTCCGGTTAGTCTCTTTTCCTTTCTAATGTTTAGTTTTTAAATGTAAAATCAAATTAGATATAAGATCCATTTGCAAGATCATGCAAATTTTCATACAAGTTTGGAAACATCACTAAAGAAAAAATATGAAAAGAGTAACAATTGGTATATAACTTGTGAAGATTTCATAATATTCGTTCATCACATGCAAAATTGTACTGTACGGAGAAAGCCTATTATAGTTATCAAATATTTTAGACTTTTTGAGTACAATTTTGCTAGTAACGAACACCAAGATCACCCTTTTTTATGGTAAAACTTTGGTTGGGATAAATTTTGTCCTGCTTACTTCTTGAAATCAGCAGTAAATATTTCCTATATTTAATTTGTATATCTTAAAAAAAAGTTATTTTTAAATATATTAAAATGAACCAAAATATTTGTAAAATATAACTTATCTATATAGGATGAACTTTTATATCAAATATATAATAATGTGTTGTGGTTTATCGATATTATATTATATTTTTATAAAAATTTAATTTTCGAAATGGTAGCTATTTAAAGACTTTGAATAGTTTGCATTTGATTCCATTTTCAAATATGTTATTTTATCTTTTTAAGTCTCTTCAATATTGTACTAGGGGTGTAAGAATACTGGTTAAACCCGAATAACCCAGACTACCCAACTCATATTGTAAGGGTTGGGTTGGATTAGACTAAAATATGAGAAATTAGATTCAATCGAATTCGAATTAATATAATATATATAAAAAATAATAACAATAATTTATTTAATAAAAAACAGTTATATTTCTTATTCTTTTAGATTTAGATTGAGTTGTATCTTGAACCTTATTATTAAAAATGGATTTCATGAACATTTATGGGTAATTTTTTTATCTATGTATTTTAAGAATTTTGAGTTTATTTGTGTTTGTAATTTTGAATTTATTTAGGTTTGTAACTTTGAATTTATGAATACTTAGCTTGAATTTATTGTATGAAATTTTGAATTATGTTGTTTGAAATTTAAATGTAACAATCCTATACAATCCGATTTAAATGTAACTAAAAACGAAAGAAAAAAAATCTATACAACCCAACAACCAAATCCATATTTTACCGGTTGAGTTGAAAACTAAATTCAAGTTATTCGGATTGCAACCCAAATAACTCGAAAATATGGATTAGGTTGAGAATGTCCCACGATCCAATTCGATTTCACCCTGCATGAATGATAGAGTTTTGCTTAATATGTCCTTGAATTAAGGAGTTTTTTTATAAAAAATATAGCAAAATGAACCGTTTATATACAAAATCCATGGAATCAAAATGAGAGAGAAGATGGAAGAAAAGAGGGTTGGAGTGACTTTTGAATTCTTAAATAATTAAAGGGCAAAATAGTATTTTTGGCATGTATGGTGTAACTTGTAAGTTCAATGGTGTAGTATTTTTGGCATGCATGTCAATTTTCCCAAGTTATAATTTAGTATAACGATTTGTAAAATTTCATGAATAATTTGTATCGATCGATCAAATTCTCATAAATAATTCCTACCATAAACACTATTAGTATAGATTCTAACTTTGATTTTACAATTTAACCTTTTATTATTGTTTGTCTCTTTTTATACGAGGCTAGAAAAACATTTTATAATAAAGGAAAATTTTAAAAAATAGTAAAATTAAATTAAAATATTTTTCTATCGATTCATATATTTGTTAATATTTATAATTGGTAGAATATAATTTTTTTTATATATTGTAAATATTTTATCAAATTTGTTAATCTCTCTAATAAATTATTTTTTTAAAAAATAGAAACGAAAGTATATGTTTGGAAAAGATAATGAGTGAGTAAAAGCTTTGGCTGGTCTTCTTTCTTTACTGGAGGGTCATCTTTAGAAAATGGAGGAGCATGTTAGCTTTTGGAGTCCTAATGCTTTGGAAAGGTTCACGTGCAAATCTTTTTTTTTTCCATGTTTGGTTGATCTTTTTCGCTTAGTACGGTGTGTCAGTTCTACAGCATTAAGACTCGTAGGGAAGTGAAAGTTACTTACCTGGCAAGTTCTTCACGGTTGTGCTATCGCGTTGGACTTGCGAGAAAGTTGTCTTCACTTGCTGGGTCTTGCTTTAATTATTGGAAGGTGGAGGAAGGCTTGGACCATATTGTCTACCACTGTGTTTTGCTAGTAGCGTTTAAGATTTTTCTCTTTCTTTTTATTGCAGACGTTTGTTCGTATCAGAGATGTTAGTGCTATGATTGAGCACTGCCTTTTGGGGAGTAGGGTTGTTTTCTTTTTTCTAATAGATGGTGGATGTGTTTGATCTTAGGTGTGCAAAAGGGTTGGTTGGGTTGGGTTGGGTTTTCCTTCTTTAACATTCTCAACCTAAGCTTCAATTTTATGTAGGCTTGTCTTTTAGGTATGCTAGTGTATTTTTTTCATTTTCTTAACGAAAGTTGTTTCCATTCAAACAATGACAAGAACGTTTTTTACTTCAAAGCATTAGTTATTTAATGAACTATGATTATTTAAATAAGGGATACTAAAATAAAAGTTTTTCCTTTAATATGAATAATCTTTTGTCTATATCTTTTAAATAAGAAGATTTGGAAGAACTAATTGGGCCCATACACAACTAAGCTCTTAATGCAAATTGAGTTCAAACAGTTCTCTCTTTAGAAAATTGTGTTCTTGAAGGTATTGAGATTACCTTCTTTACTATGATGTATTACTGAAGATGTAGAACTAGTTTTCACTCCGTACTCGTTGATAAGAAATATATTAAAGACGTGATGAATTCAAAGGAGCTTGAGTTTATCTTCGATAAGATTAAAACACAAATTCAGGATAACCTGTTTTTATTTAAGTTTTCATTATAACTTAAAAGAGTTGCTCTACGAGAATGAATTTCTTTTAAGTTTATTACTTTATTCAAACTTAATAATATTTACTACCTGAACAAAAAAGGAGACAAAAAACTCACTTGTGGTGGAATTCGCTGTTAACAAAAGCTCACTTTTTTTATCTCTTACCATAGAGTAATTGGTTTGAATTTTCACCATTATTTGTGAAGTAATATTTGAAGAACATACACATATTATCATATTTTTTAGAATAACCATTTTCATATATAACTCTGTTGAAGGCTGAATCCACAAATATTATGAACATTTACATCAAATGCTATAACATGCAGGTTCACTCGTCCAAGAAGGCATGTGCTGCTGTATATCCGAGCACGACGCAGAACGGCATAGTGTGGTTCTGGCCAAACTTGGACCCCAAATTCAAAGATATTATTATGGAGAAGAAACCTCCCTTTATTCCGGAGCTAGACGACCCATCTTATGTCAAGTTAGAGGGGAATAGGGATATGGCATACGGGTAAGCATTTCCGTTCTTTGTTCTTTCTGATTTTTGGTGCATTTTGAAATGTCAAATGGAAAGAGCTAAAGCAAAACGAATCAAAATTCTGTTCACTCATTCTAGTCAATGTTCCAAAAAACTATTTAGGCTTATGCCTTGAGGCCGTTGACTGTTGAGTATAACTTAATTCATTCATTTGAACTTCTGAGTATACCGATGATTTAATACGGTATAAGAAAAGTAAATTGTGAGTTTGAACTCCTATAATATCATTTTGTAGTGATATCCTAATCCGATTACTTTGTCATTGAAAATTGGAGTTTCCAGGTATGAGGTACTGATTGAAAATCTTATGGACCTTGCCCATCTTCCATACGCTCACTACGGGATAATGCCAGCCCCGCCACCAATGAAAAACAGATATCATTGCCAATTTATTCTTCTCAACTCTTGCATTTGAAGCTCTTACAAGGATTGCTTTGACTAACAACAATTATGCGTTCATTCATTCACAGTGAACACTGACAGGGAACGTGGCAGACCGCTTGAAATGGTCGTTGAAAAGTTGAAAGCAGATGGTTTTGTTGGCAAAGACGAAACGCTCCGTCACAAATTTTTTGCACCTTGTGTCTATTATTACTTCACTGATCCAGAGCTGGTTCAAGGAAATGTAGAGAGCTCCAGCAAGAACGATGGATCTGTATCGTCAACTGCAAATGTAAAGGTATATATTAGCATCATCATTACTGCATTTCCATGTCTCTCGCTGATGATTTCTTACATCATCCATCAAGTCAAAAATTTATGCATGATTGACTACAATAAATTGAATTATATCAATAATTCAATACTTTAGAATGTCTTGATTCTTGAATCTGTCATCTGACACTCCAAACGACCCACTCTAGTGAAGCGTCAAGGCAATGCCCCCCAAAGCCTAATTTATATTCGTATTTATGCTATTCACACTATTTACATTTTTTTGCACAATATGAACTCCCCAACTCTACTAGCACCTCTGAGTCTGTAATATGATATTTTCTCTAATATGATATTTTCTCTCTTACAATAAACTAATCTCTCTCTGCTTGTAAACGTAGCTAATGTACTGTTAGTGAACTATGTAAATCTTACGTTGATTTCGCCGTTCTTTACAATTTCTTTCTAAAAAGCACGGACACGGATACGAGACACGAATACGACACGAAACGCTATCCAAACTAAAGTGTCTGTGCATCTTAGTTTTCTTGCTTTGTTTGGTTGTTGATTTCCCCACACTTCTCCTCATGCTAAATCACCGGTCAACCCTCATATGTGAGGTTGAAGTTTTATAGAGGTTCAATTATAGGATCTTGTGCATTTATAACATGCTAAATCACCGATCAACCTAAAAACTTAAGCGGATAGGTTACGACCAATTTCATTTAAAGCAATACTTCAACAGCAATCTAGACTTGGATTCTTAAACTGCATTTTCTTGTTTTTTCTTCTTTTTGCTGGTGATTCGATCTGATTGATGAAAAGTTTTGTTGGTTTAGAAACCACCAACTGAAATCTCGAGAAGAACATTCTTGGCTTTTTTCTGCATCCCGGTTAGTCCAGGTAAAAGCAGATTGATCTGGGCCTTCCCTATTAACTTGGATAAATGGGTACATTTTATTGTCCCACGATGGATTTTTCATATAGTACAGAACTTGATTCTAGATTCAGACATGTATCTTCTTCATGTTGAGGTAAGACGTTCATTTTGTTTGTTGATATTTTCTTCGCCTGTCAAATACAGTTCCTAATGAAGTTTGTTCTGAATTTTAGGAGCATAAATATGAGGAAATAGGCACTTCCAATTGGCATAAAGCTTGTTATGTGCCAGTAAAATCAGATGCTTTCGTTGTTGGATTTAGAAGATGGTTGAACAAGTATGCTGGTGGTCAAGTTGATTGGGGAGGCAAATATTCTGGCTCCCTTCCTTCACTTTCTCCTAGAGCACAAGTGTTAGAAAGGTATCCTCTGATTTCTAAAACTCATCTTCCCTACTATTTTTAGAGGGTAAATTTAGTCTGCCTACCATAAGGATTTGGTTTTTAGTTTTCATGTTTTCGAAATTTTTGTTTCTTTTCTCCTAAATTTCATGATATGCCTTTTACATTTCTAGAAGAAAAACTTGAATAGTTAGTCAAACTATAGAACCAGAACAAGTTTTTGGAAACTAATTTTTATGGTTTGGCTTTTGAAAATATTGGTGAATATTGGATAACGAAATAAAAAAAATGGTGATTGCAATGTATTGAGACAATTTAAAAGAATTGCAAATCTAGCAACATTTTGATCTAGGGACTTCAAAGTGGGCTTCCTAATCACAACTGTTCTCGGTCAGATTTTGTGTTTCACTTGATACATGGAGATGGATTGTTGACCCCTCTTCATCTTTTAACGTAAAATCTCTCGTGGATCATTCGATGAATTTTGAGAATCCTTCTAAGTGTTGTCAATTCTACTGATTGTCTTCAATGTCGTATGCCTTATATGTATATCTCTTCATCTTGGTGTGTTACGTGACAGAACCATTTTGAATCCCCTACTCATCTGCTTATGCATTGTTGCTTGCCTCCTAAATCAGAATACTATTTTAGGGTCTTTACCCCTAACTCATCTGCTTTTGATTGGTCTTTAGCCTACTCTTGACAATAGTTTTGACATTTCGGCTTCCATTTTAGTGGGCCATCCACTTCATGGTAATAAAGACTTTTTCGCTGTCCATTTCGTGTGCTTTGTTCTCGACATTATAGGATGAGTGTAATAAGCGTCTCTTTAAAGATTCATCTTCTTGTTTTGATCATAGTTTTATGAATTTAATTTTGTCCTACTAGGTTGTACTGGTCCAAAACTAGCACCCATTTACAAACTTGGATCTTTCTTATTTAGTTTCCAACTAGAAATCTCTTTTGTCATCACTTAGAGGTGTTCGGAGTGTCTCCTTATTTCATTTATTCAACGAAACGTTTCTTCTCTGAAAAAAAAAATCAGGTACTGGAGCCATGTGGTGAATTGCAAGAGCTGCAATGGAGCATATAAAGCTCTAAACAAAGCTGAGGTGAGTCTTCAGGTGATCTCCATAGCTGCAATTGGAGTTTTGGCATTGACACAAAATGGTGTAATTTCAGCAAAAGTTAGAGCCACCATTTTCATCATTGCAATAGTCTGTTTTGCTGCTTCAAAGTGGTTATCCCATTTCATTCAAGAAACTTTCCGCTTCCGTGACTACATTCATGCCTTGGTTTGACTCTTTTCTTCTTGTCTTTCTTCATGAACAACTCACTTATATTCTATCTTGTACATATTCAAATCATCAACTTCAATAAGCCGATCATATCGACAAAGTTGAATATTCGTATTTTATTTGCTAAGTTGTATTCGAATTGACATTTTTAGAAAGATTCAAGTTTGAATTATTTTTTTTAATTTTAAAATGTTAGGTTTAAAAATTGAGAATCCAAATAAAACCAAATACAAATTCAATAAAGAAATAGTAAAAACTAAGGTACTTATATTGGGTGACATCTTTAGACTAATAATAATTAAGTGTATATCAACATTATTCAAAAATTACAAATATAGCAAAATTTATCATCGATAGTCTCTAGTTGAAGGCTCATATGAGATAGATTTTTAATAGAAGAAATAATCATATTTTTCATGTGGTTTTAGGGTATAATGAAATTGCAATTTAAATAACTCTCCTTTATTTTACAAAAACAAACTTTTATTTGACTTTTCAAGTAATAGAATACAATGTACATGTCATCAACGCAATTAATATCTGGGAAACACAGATACTAACATGCAACATCGGAGACGTGCTATTTTTCAAAAAACGTAGAACATGACACATTGGAGACGTGCTATTTCTTTAGTAAGAAAATCAAATATATGTCATGTATATAAACATATAGTGAAATATTCCAATTAAAAACATCAAAAGAAAAAATTGGGCAGCAAAAGGGGAGCACGAACACGACACTCGACAAAGAGGGGGAGAAGAGAAATGTGAAAAGTAAAGGGCTGAAAAGAGAAAATAAAAAAAAAATAACTTAAAAATGGTTGGACCATGTCGAAAATAAAAACAATAAAATAAATAACACACAAACGACATTTGACGGACAAGCCAATGCTTCTTATATTAGTATTAGCATCAACACATAACGGTATAGTAAGTATCTCGTTAACAAATTTAGGGTATAGACAATTTAAAACATTTTACAAACATGAGAAACCAAATTGCACGTTTTGAAATTCTACTACTAAGTAGAACCAAAACTAAAATTGTCTAGACAAAATAATAACAATAAATATCTATAAATTTAAAAAATAATAATAATAATAACACGTGGTTTTGCCGGTTTTCATCGTTAGATTGGTTCGCGCTAAAACGTTTATTGAATAATTCCGGAGATCATTATCTTGTTCATCAATGGCTGAAAAGCATGCAAACTTTCCCTTTCCTCCATGATTCATTTCCACAGCTACACACGCCTTCATTTCAATTTTCTCACCTTCAACAATCCTCCGATTCTCCCACTTCCCCGCTCTGCCCAAACCAGAATCAGATTCACACCCATGGAGGTTGCCAGAATTTCCTCTCCTCATCTAATCCTCATCCCAACCACAGTCAACAGAACCCTAACCCCCAATCCCTACTCTCTCGCCTCCAATCGGAATCCGCTGCCGAGATCGAGATCGAGATCATTTTCCAATTTCAAGACGCCGACGCATCGAAATGCGATTAGAAAGTGCGAATTACTCCGCACGGCCATGGCGTCCGACGTTGTCACTTCAGAACGACCGGAAGTGGAGGAAGAGAAGTTCGATTGGTTTGCGGAGTGGTATCCGGTGATGCCGGTGTGCGATTTGGACAAGAAAGTACCGATTGGGAAGAAGGTTTTGGGGTTGGATTTGGTGGTGTGGTGGGATAGGAATGAGAATGCGTGGAAGGTGTTTGATGATAGTTGTCCTCATAGATTGGCGCCGTTGTCGGAAGGGAGGATCGATCAGTGGGGGAGATTACAGTGTGTGTACCATGGATGGTGCTTTAATGGCTCTGGTGACTGTAAATTCATCCCTCAAGCGCCTCCCGATGGCCCTCCGGTAATCATTTAGTCTCTTTTCCTTTCTAATGTTTGTTTTGGTGTACTTTTGAAAAAGTGATTAAAAAGAAAAGATAAAAGAGTAATTATAATTTAGTCCTCGATGGAGGGTCCATTAATAATCCCCTACAATGGAAGGTCCATTAATAATCCCCTACAATGGAAGGTCCATTAATTTTAGAAAATAGCAAACAAGAAACAGAAAACAGGCTAAATTACCATTTAAGTTAGAATTTAATACTTATGGTTTGTTAAAATCTCATTAATAGTTCTTATTTGATAAAATACTCCCTACCATATGTGCTATTGATGGGTGTCGTCGAACCATAAGAATTAAATTTGAATTGTAAATCATAGAGTCTAAACAAAACATAAGGACAAAATTTCACTTATGAAATTTAAACAAACTTAGGGCTCAGTGCTTAGACTGATACAATTATTATCTTAAAATTTAAATTAACACAACTCAATTATTAATTGACGTAGACCCCCTTTTGTTTTAAGTATTTCCTTGTAAATTCTTTTATTTTGCTCAATGAAAGCTCGGTATCATATTTTAAAAAATCTAACTATGAACTAAGACAATCACTTATGTATGTTTTGAAAATGTAAGGACTACAGTTGACAAAAGCTAGATCAAAATGGGCGTTTTAGTACTGTATTGATCTATATAAACAAATGCTATATATATTCATCTCTTTTGATAATGTGTGGGGTAACATATTTTACATGGATAATAATTTTTTTTTAGTTTAATTCACTTAGTATTTTTAAAAATAACAAAATAAATTAAAATATTTACAAGCTATAGTAAAATTTTAGGTTATATCACTGGTAGTCTTCTATTAAATGATAGAATTTGCTATAGGTTGTAGATATTTTATAAAATTTACTATTTTTAAAAATTTCGCTCAGTTCACATTGAATTTTCTTTTTAAAGCTTTCTTAATTATTTTATAAATAATTTTTCCACTCAAATATTTTGTAAGTTAGATCCTATATGGAAATGTGCTTTGATAATTGTAGGTGAATTTTGTATTGGGATCAATATGAATCTTATATGACATCATATAAACTTGTGATCTGAGCTACTAATATATTTAGTTTGGTATCAACAATATTATAAGATTCAGAAATAAAACAAAGAAAAATGCAGATGACAAATTTACGATGTCGAAATGATAAAAAGAAAAACTTTGTTGAATATAAAGGAATAGAACAGGTGATTTAACTGTTTGCATGAACTTGTATAAAAATTAGAAAGAGATATACAAACAATGATCTAAAATTTTATTTTATCATTTATCAACTTAACTTAAAGCATAAATCGGTAGTTAAACATTTCTACCAGTCTTATAGAGCCTATGGTTTGAATTTTCACCTTCATATTTGCGAAGTAATATTTTTTAAAATATACATCCATTATCATATTATTGAGAATGAGTATTTTTCATACATAAGCCTATTGAAGGCTGAATTTACAAATAAAGTGAACATACATCCATTGCTATAACATGCAGGTTCACTCATCCAAGAAGGCATGTGTTGCTATATATCCAACGACAGTGCAAAATGGCATACTTTGGTTCTGGCCAAACTCGGACCCCAAATTCAAAGATATCATTTTGGAGAAGGAACCTCCCTTTATTCCAGAGCTGGACGATCCATCTTATGTTAAGCTAGAGGGCAATAGGGATATGGCCTATGGGTAATCAGTAATCACTTCAAAGCCTCTCTCTGATTTTCATGCCTTTTGAAATGTCAAATGCAAAGAGCTAAAGCAAACAAATCAAAGATTTGTTCACTAATTCTTATTTATGTTTTTTAGGTATTGTTTACTAATTCTAATATCTGCATTTAGGAATTCTAGCATCTGAAAGTTGTTTTTATCAACAAAAAGAAAAGTAACTGAATTTAGGAAATAACCGTCCACAATCAAATCTACGGTGTCATGAAGACCATGTTTGTTGAAAAGATAGTTAAGTATCTTCATAAGACTAAACCAAAGTTTGAATAAAAACTATATTGTACTAGAATGGTGTTAGGTTTTTGTACTTGTTGATGTGATTAGCTTCTAGATAATGGTTTGGAGGAGAATGGGAAGGATGGGGTTGTTCTTTTTCACACCCGTAATTGTTCGAGTTCACTTACGTGCATCTCGACCCTACAACATTTGGATGTCAAGGAAACCCATAAAGATATTAAATCTTAGATAGGTTATCACCATGAATTGAACTCACAAACTCTTGAAAGGGAAAGGGAGTTGAGTATATATATACATCTTATTCATTCATTTGAACTTTTGAGTTTAGCAATAATATGTATCGGAATTGTAAATTATGAGTTTGAACTCCTACAATGTCATTTAGTAGTGATATTCTAATCTGATTACTTTGTCATTGAAAATTGGTGTTTTCAGGTATGAAATACTGATTGAAAACCTTATGGACCCTGCCCATGTTCCCTACGCACACTACAAGATAATTCCAGCCCCACCATCAATAAAAAACAGATATCTTTGCCAATTCTATCTTCTCAACTCTTGCATTTGAGGCTCTCACAAGGATTGCTTTGACTAACAACAATCATGTGTTCATTCACAGCAACTGCTGACAGGGAAGGTGGCAGACCACTTGAATTGGTTGTTGAAAAGTTGAAAGCAGATGGATTTGTTGGCAGACACGAAAGGCTCCGTCACAAGTTTTTTGCACCTTGTGTCTATTATTTTTTCACTGATCCAGAGTTGGTTCAAGGAAATGTAGAGAGCTCCACCAAGAACGATGAAGCCGTATCATCAACTGAAAATGTAAAGGTACATTAGATTAGACAACGGCATAACTGCATTTACATGTTTCTTCTTGCATTGAGTCAATAATTGTTAGATCATCCATCAAATTAAAAAATTAAGCATACGTCCCAAAAGCCTAATTTGTATTCGAATTTATGTTATTTGAGATCTTGGTCCTAAGGTTTAGTGGAGTAAGCTATGTAAATTTTATAACTATACCGTCTTTGAATTTGTAATACGATAATTCCTATCCAATAATAAATTGTTTTTTTTCTAATATGAACACAGCCAACACACTGTTAGTGAACCACGTAAATTTCTGTGACGATTTTCCTGCCCAATATGTTTTTCTTGCCTTCTTTGGTCGTCGATTTCATAACAAACATTCCCTTCATATGTGAGCTTGAAATTTCGTAGAGGTTCAAATTTCGGATCTCGTAGTTATAGTAAATCTCATTTTATCAATACTTCAACTGTAACTCAAACTTAAACATCTGAACTGCATTTTCTTTTGCTTTTCGCTAGTGATTTGGTTTGCTTCATGAAAAGTTTTGTTGGTTCAGAAACCGCCAACAGAAATCTCGCAGCGAAGATCATTTCTGGTTTTCTTCTGCATCCCAGTTAGTCCAGGCAAAAGCAGATTGATATGGGCCTTCCCTAGGAACTTTGGGAAATGGATGAACTATATTGTCCCACGATGGATGTTTCACATAGGGCAGAACTTGATTCTAGATTCAGACATGTATTTTCTTCGTGTTGAGGCAAGACAGTTGATTTGTGGATATTTTATTTGCCTGTCGAATATAGTTTCTGATGAAGTTTGTTCTGAATTTTAGGAGCATAAATATGAGGAAATAGGCCCTTCAAATTGGCATAAAGCTTGTTATGTGCCAGTAAAATCAGATGCTTTGGTTGTTGGATTTAGAAGATGGTTGAACAAGTATGCAGGTGGTCGAGTTGATTGGGGAGGCAAATATTCTGGCTCTCTTCCTCCAATCCCTCCTAGAGAACAGGTGTTCGAAAGGTATCCTCTAATTTCTGAAACTCAACTTCCTCCACTCTCTCATTGCCGACTAGTTTTGAAAAGAACTCCATGTTATCTAATATAATTAGTTTTGAAAAAGAACTCCATGTTATCTAATATGGAATCAAAGTTCATAAAGCCTACTTAAGCATTTGGTTCATAAAGATTTGATTCAAGAATCGGAAACCCAAGAAGGACCATCTTGAGGAGGCATTTTGGAACTTTAGTTCGAATTTGTTAGGACAGCAAACCTTTCACATTTATTTTAACCCACAAACTATAATAACTAATTTATTGCCCTAAACAACCCCTGTTTTGTTTAGTTTAGGTATGATGTTCAATAATTGAGCTTATTTTTTTACAATTTCTTAATTATTTTTTCATCTTTTCCTAAGTAAACACCAGACTTCTTGGCCAAATCATAGAAACAAAAACAAACTTTAATGTAAAAAAAAAATGTGACGACTTAAACTTAACCTCAAAAACCAAAAATCAAATGATTATCTACCTTTACCAAAGGTATTAGGTTTGTCGTTCCATAATTGGTTATTGAATTTCAGGTACTGGAGCCATGTGGTGAATTGCAAGAGCTGCAATGGTGCATACAAAGCTCTAAACATAGCTGAGGTGAGTCTTCAGGCCATCTCCATTGCTGCAATTGGAGCTTTGGCATTGATAAAGCATGGTGTACTTTCAGCAACAGTTAGAGCCACCATTGTCACCGTTGCAATACTCTGTTTTGCTGCTTCAAAGTGGTTATCCCATTTCATCCACAAAACTTTCCACTTCCAAGTTTACAATCATGCCCTGGTTTGA

mRNA sequence

TGTGTGTACCATGGATGGTGCTTCAATGGCTCGGGTGATTGTAAATTCATCCCCCAAGCGCCCCCTGATGGCCCTCCGGTTCACTCGTCCAAGAAGGCATGTGCTGCTGTATATCCGAGCACGACGCAGAACGGCATAGTGTGGTTCTGGCCAAACTTGGACCCCAAATTCAAAGATATTATTATGGAGAAGAAACCTCCCTTTATTCCGGAGCTAGACGACCCATCTTATGTCAAGTTAGAGGGGAATAGGGATATGGCATACGGGGAACGTGGCAGACCGCTTGAAATGGTCGTTGAAAAGTTGAAAGCAGATGGTTTTGTTGGCAAAGACGAAACGCTCCGTCACAAATTTTTTGCACCTTGTGTCTATTATTACTTCACTGATCCAGAGCTGGTTCAAGGAAATGTAGAGAGCTCCAGCAAGAACGATGGATCTGTATCGTCAACTGCAAATGTAAAGAAACCACCAACTGAAATCTCGAGAAGAACATTCTTGGCTTTTTTCTGCATCCCGGTTAGTCCAGGTAAAAGCAGATTGATCTGGGCCTTCCCTATTAACTTGGATAAATGGGTACATTTTATTGTCCCACGATGGATTTTTCATATAGTACAGAACTTGATTCTAGATTCAGACATGTATCTTCTTCATGTTGAGGAGCATAAATATGAGGAAATAGGCCCTTCAAATTGGCATAAAGCTTGTTATGTGCCAGTAAAATCAGATGCTTTGGTTGTTGGATTTAGAAGATGGTTGAACAAGTATGCAGGTGGTCGAGTTGATTGGGGAGGCAAATATTCTGGCTCTCTTCCTCCAATCCCTCCTAGAGAACAGGTGTTCGAAAGGTACTGGAGCCATGTGGTGAATTGCAAGAGCTGCAATGGTGCATACAAAGCTCTAAACATAGCTGAGGTGAGTCTTCAGGCCATCTCCATTGCTGCAATTGGAGCTTTGGCATTGATAAAGCATGGTGTACTTTCAGCAACAGTTAGAGCCACCATTGTCACCGTTGCAATACTCTGTTTTGCTGCTTCAAAGTGGTTATCCCATTTCATCCACAAAACTTTCCACTTCCAAGTTTACAATCATGCCCTGGTTTGA

Coding sequence (CDS)

ATGGAGAAGAAACCTCCCTTTATTCCGGAGCTAGACGACCCATCTTATGTCAAGTTAGAGGGGAATAGGGATATGGCATACGGGGAACGTGGCAGACCGCTTGAAATGGTCGTTGAAAAGTTGAAAGCAGATGGTTTTGTTGGCAAAGACGAAACGCTCCGTCACAAATTTTTTGCACCTTGTGTCTATTATTACTTCACTGATCCAGAGCTGGTTCAAGGAAATGTAGAGAGCTCCAGCAAGAACGATGGATCTGTATCGTCAACTGCAAATGTAAAGAAACCACCAACTGAAATCTCGAGAAGAACATTCTTGGCTTTTTTCTGCATCCCGGTTAGTCCAGGTAAAAGCAGATTGATCTGGGCCTTCCCTATTAACTTGGATAAATGGGTACATTTTATTGTCCCACGATGGATTTTTCATATAGTACAGAACTTGATTCTAGATTCAGACATGTATCTTCTTCATGTTGAGGAGCATAAATATGAGGAAATAGGCCCTTCAAATTGGCATAAAGCTTGTTATGTGCCAGTAAAATCAGATGCTTTGGTTGTTGGATTTAGAAGATGGTTGAACAAGTATGCAGGTGGTCGAGTTGATTGGGGAGGCAAATATTCTGGCTCTCTTCCTCCAATCCCTCCTAGAGAACAGGTGTTCGAAAGGTACTGGAGCCATGTGGTGAATTGCAAGAGCTGCAATGGTGCATACAAAGCTCTAAACATAGCTGAGGTGAGTCTTCAGGCCATCTCCATTGCTGCAATTGGAGCTTTGGCATTGATAAAGCATGGTGTACTTTCAGCAACAGTTAGAGCCACCATTGTCACCGTTGCAATACTCTGTTTTGCTGCTTCAAAGTGGTTATCCCATTTCATCCACAAAACTTTCCACTTCCAAGTTTACAATCATGCCCTGGTTTGA

Protein sequence

MEKKPPFIPELDDPSYVKLEGNRDMAYGERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDGSVSSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHVEEHKYEEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGGRVDWGGKYSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKALNIAEVSLQAISIAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV*

Homology

[Close]

BLAST of CSPI01G29380 vs. ExPASy Swiss-Prot
Match: Q8W496 (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTC52 PE=2 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 6.3e-83
Identity = 169/359 (47.08%), Postives = 204/359 (56.82%), Query Frame = 0


Query: 4   KPPFIPELDDPSYVKLEGNRDMAYG----------------------------------- 63
           KPP+IPEL+DPS+ KL GNRD+ YG                                   
Sbjct: 211 KPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKGKYIICI 270

Query: 64  ---------------------ERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFT 123
                                E G+PLE+ V+KL   GF  K E     F APCVY   T
Sbjct: 271 SNSCFNPFTNLQILLAEKIDREGGKPLEINVKKLDNKGFFSKQEWGYSNFIAPCVYRSST 330

Query: 124 DPELVQGNVESSSKNDGSVSSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLIWAFPINL 183
           DP   Q +   +     + S  A + K      RR  L F CIPVSPG+SRLIW FP N 
Sbjct: 331 DPLPEQEHEYPAP----AASDKAALSK------RRLSLIFICIPVSPGRSRLIWTFPRNF 390

Query: 184 DKWVHFIVPRWIFHIVQNLILDSDMYLLHVEEHKYEEIGPSNWHKACYVPVKSDALVVGF 243
             ++  IVPRW+FHI QN ILDSD++LLHVEE K  E GP NW KAC++P KSDA VV F
Sbjct: 391 GVFIDKIVPRWVFHIGQNTILDSDLHLLHVEERKILERGPENWQKACFIPTKSDANVVTF 450

Query: 244 RRWLNKYAGGRVDWGGKYSG-SLPPIPPREQVFERYWSHVVNCKSCNGAYKALNIAEVSL 303
           RRW NKY+  RVDW GK+    LPP PPREQ+F+RYWSHV NC SC  A+K LN  EV L
Sbjct: 451 RRWFNKYSEARVDWRGKFDPFLLPPTPPREQLFDRYWSHVENCSSCKKAHKYLNALEVIL 510

Query: 304 QAISIAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 306
           Q  S+A IG +A++K   +S   R  ++  A+L FAASKWLSHFI+KTFH+  YNHA+V
Sbjct: 511 QIASVAMIGVMAVLKQTTMSNVARIAVLVAAVLSFAASKWLSHFIYKTFHYHDYNHAVV 559

[Close]

BLAST of CSPI01G29380 vs. ExPASy Swiss-Prot
Match: O49931 (Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 9.3e-10
Identity = 76/294 (25.85%), Postives = 117/294 (39.80%), Query Frame = 0


Query: 8   IPELDDPSYVKLEGNRD--MAYGERGRPLEMVVEKLKADGFVG-----KDETLRH--KFF 67
           +  L DP++V +  +R    A  E  + L   V +    GF G     KD +  +  +F 
Sbjct: 249 LENLMDPAHVPISHDRTDWSAKREDAQALGFEVTERTDRGFAGWWGREKDGSKPNFLRFE 308

Query: 68  APCVYYYFTDPELVQGNVESSSKNDGSVSSTANVKKPPTEISRRTFLAFFCIPVSPGKSR 127
           APCV         +Q N E   KN G ++  + +              F C P   GKS 
Sbjct: 309 APCV---------LQNNREIVDKN-GEINHFSGL--------------FLCRPTGQGKSM 368

Query: 128 LIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDM-YLLHVEEHKYEEIGPSNWHKACYVP 187
           LI  F       +  + P W FH   + + + DM +L    E   +E  P+   K  Y+ 
Sbjct: 369 LIVRFGATKRSPLIKLFPEWYFHQNASKVFEQDMGFLSSQNEILLKEKVPT---KELYLN 428

Query: 188 VK-SDALVVGFRRWLNKYAGGRVDWGGKYSGSLPPIPP---------------------- 247
           +K SD  V  +R+W++K   G     G  + SLP  P                       
Sbjct: 429 LKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPEEPAVVEHAPAGLVAGLSASSPAKGG 488

Query: 248 -----REQVFERYWSHVVNCKSCNGAYKALNIAEVSLQAISIAAIGALALIKHG 264
                   +  RY+ HV++CK C+ A KA  I +  L  + + A+ ALA++  G
Sbjct: 489 IGTMHAPNLANRYFRHVIHCKGCSSAIKAFQIWKNVLSGV-VVALAALAILVSG 514

[Close]

BLAST of CSPI01G29380 vs. ExPASy TrEMBL
Match: A0A0A0LX74 (Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600180 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 2.9e-163
Identity = 281/306 (91.83%), Postives = 294/306 (96.08%), Query Frame = 0


Query: 1   MEKKPPFIPELDDPSYVKLEGNRDMAYGERGRPLEMVVEKLKADGFVGKDETLRHKFFAP 60
           +EK+PPFIPELDDPSYVKLEGNRDMAYGE GRPLE+VVEKLKADGFVG+ E LRHKFFAP
Sbjct: 249 LEKEPPFIPELDDPSYVKLEGNRDMAYGEGGRPLELVVEKLKADGFVGRHERLRHKFFAP 308

Query: 61  CVYYYFTDPELVQGNVESSSKNDGSVSSTANVKKPPTEIS-RRTFLAFFCIPVSPGKSRL 120
           CVYY+FTDPELVQGNVESS+KND +VSSTANVKKPPTEIS RR+FL FFCIPVSPGKSRL
Sbjct: 309 CVYYFFTDPELVQGNVESSTKNDEAVSSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRL 368

Query: 121 IWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHVEEHKYEEIGPSNWHKACYVPVK 180
           IWAFP N  KW+++IVPRW+FHI QNLILDSDMY L VEEHKYEEIGPSNWHKACYVPVK
Sbjct: 369 IWAFPRNFGKWMNYIVPRWMFHIGQNLILDSDMYFLRVEEHKYEEIGPSNWHKACYVPVK 428

Query: 181 SDALVVGFRRWLNKYAGGRVDWGGKYSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKAL 240
           SDALVVGFRRWLNKYAGGRVDWGGKYSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKAL
Sbjct: 429 SDALVVGFRRWLNKYAGGRVDWGGKYSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKAL 488

Query: 241 NIAEVSLQAISIAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQV 300
           NIAEVSLQAIS+AAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQV
Sbjct: 489 NIAEVSLQAISMAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQV 548

Query: 301 YNHALV 306
           YNHALV
Sbjct: 549 YNHALV 554

[Close]

BLAST of CSPI01G29380 vs. ExPASy TrEMBL
Match: A0A5A7UN46 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00880 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.5e-159
Identity = 280/314 (89.17%), Postives = 286/314 (91.08%), Query Frame = 0


Query: 1   MEKKPPFIPELDDPSYVKLEGNRDMAYG---------ERGRPLEMVVEKLKADGFVGKDE 60
           +EKKPPFIPELDDPSYVKLEGNRDMAYG         ERGRPLEMVVEKLKADGFVGKDE
Sbjct: 199 IEKKPPFIPELDDPSYVKLEGNRDMAYGFQVRVNTDRERGRPLEMVVEKLKADGFVGKDE 258

Query: 61  TLRHKFFAPCVYYYFTDPELVQGNVESSSKNDGSVSSTANVKKPPTEISRRTFLAFFCIP 120
           TLRHKFFAPCVYYYFTDPELVQGNVESSSKNDGS+SSTANVKKPPTEISRRTFLAFFCIP
Sbjct: 259 TLRHKFFAPCVYYYFTDPELVQGNVESSSKNDGSLSSTANVKKPPTEISRRTFLAFFCIP 318

Query: 121 VSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHVEEHKYEEIGPSNWH 180
           VSPGKSRLIWAFP N DKWVH IVPRW+FHIVQNLILDSDMYLL VEEHKYEEIG SNWH
Sbjct: 319 VSPGKSRLIWAFPNNFDKWVHSIVPRWMFHIVQNLILDSDMYLLRVEEHKYEEIGTSNWH 378

Query: 181 KACYVPVKSDALVVGFRRWLNKYAGGRVDWGGKYSGSLPPIPPREQVFERYWSHVVNCKS 240
           KACYVPVKSDA VVGFRRWLNKYAGG+VDWGGKYSGSLPP+PPREQV ERYWSHVVNCKS
Sbjct: 379 KACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPPLPPREQVLERYWSHVVNCKS 438

Query: 241 CNGAYKALNIAEVSLQAISIAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFI 300
           CNGAYKALN AEVSLQ ISIAAIGALAL K GV SA VRATI  +AILCFAASKWLSHFI
Sbjct: 439 CNGAYKALNKAEVSLQVISIAAIGALALTKSGVSSAKVRATIFIIAILCFAASKWLSHFI 498

Query: 301 HKTFHFQVYNHALV 306
           HKTF F  Y HALV
Sbjct: 499 HKTFRFHDYIHALV 512

[Close]

BLAST of CSPI01G29380 vs. ExPASy TrEMBL
Match: A0A1S3BRB5 (protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492438 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 6.9e-157
Identity = 281/341 (82.40%), Postives = 286/341 (83.87%), Query Frame = 0


Query: 1   MEKKPPFIPELDDPSYVKLEGNRDMAYG-------------------------------- 60
           MEKKPPFIPELDDPSYVKLEGNRDMAYG                                
Sbjct: 199 MEKKPPFIPELDDPSYVKLEGNRDMAYGYEVLIENLMDLAHLPYAHYGIIPAPPPMKNRV 258

Query: 61  ----ERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDG 120
               ERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDG
Sbjct: 259 NTDRERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDG 318

Query: 121 SVSSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQ 180
           S+SSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLIWAFP N DKWVH IVPRW+FHIVQ
Sbjct: 319 SLSSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLIWAFPNNFDKWVHSIVPRWMFHIVQ 378

Query: 181 NLILDSDMYLLHVEEHKYEEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGGRVDWGGK 240
           NLILDSDMYLL VEEHKYEEIG SNWHKACYVPVKSDA VVGFRRWLNKYAGG+VDWGGK
Sbjct: 379 NLILDSDMYLLRVEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGK 438

Query: 241 YSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKALNIAEVSLQAISIAAIGALALIKHGV 300
           YSGSLPP+PPREQV ERYWSHVVNCKSCNGAYKALN AEVSLQ ISIAAIGALAL K GV
Sbjct: 439 YSGSLPPLPPREQVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGALALTKSGV 498

Query: 301 LSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 306
            SA VRATI  +AILCFAASKWLSHFIHKTF F  Y HALV
Sbjct: 499 SSAKVRATIFIIAILCFAASKWLSHFIHKTFRFHDYIHALV 539

[Close]

BLAST of CSPI01G29380 vs. ExPASy TrEMBL
Match: A0A5D3CD90 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00860 PE=4 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 5.1e-152
Identity = 272/344 (79.07%), Postives = 290/344 (84.30%), Query Frame = 0


Query: 1    MEKKPPFIPELDDPSYVKLEGNRDMAYG-------------------------------- 60
            +EKKPPFIPELDDPSYVKLEGNRDMAYG                                
Sbjct: 689  LEKKPPFIPELDDPSYVKLEGNRDMAYGYWLLILVSGFRNSSPLDNGLDENGKGKGVLFY 748

Query: 61   ------ERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKN 120
                  E GRPLE+VVEKLKADGFVG+ E +RHKFFAPCVYY+F+DPELVQGNVESSSKN
Sbjct: 749  TPTADREGGRPLELVVEKLKADGFVGRHERIRHKFFAPCVYYFFSDPELVQGNVESSSKN 808

Query: 121  DGSVSSTANVKKPPTEIS-RRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFH 180
            D +VSSTANVKKPPTEIS RR+FL F+CIPVSPGKSRLIWAFP N  KW+++IVPRW+FH
Sbjct: 809  DEAVSSTANVKKPPTEISQRRSFLVFYCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFH 868

Query: 181  IVQNLILDSDMYLLHVEEHKYEEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGGRVDW 240
            I QNLILDSDMY L VEEHK EEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGGRVDW
Sbjct: 869  IGQNLILDSDMYFLRVEEHKLEEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGGRVDW 928

Query: 241  GGKYSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKALNIAEVSLQAISIAAIGALALIK 300
            GGKYSGSLPP+PPRE+VFERY SHVVNCKSCNGAYKALNIAEVSLQAISIAAIGALAL K
Sbjct: 929  GGKYSGSLPPLPPREEVFERYRSHVVNCKSCNGAYKALNIAEVSLQAISIAAIGALALTK 988

Query: 301  HGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 306
            +GV+SATVRATIVT+AILCFAASKWLSHFIHKTFHFQ YNHALV
Sbjct: 989  NGVISATVRATIVTIAILCFAASKWLSHFIHKTFHFQDYNHALV 1032

[Close]

BLAST of CSPI01G29380 vs. ExPASy TrEMBL
Match: A0A6J1HB02 (protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461739 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 3.1e-141
Identity = 253/342 (73.98%), Postives = 272/342 (79.53%), Query Frame = 0


Query: 1   MEKKPPFIPELDDPSYVKLEGNRDMAYG-------------------------------- 60
           MEKKPPFIPELDDPSYVKLEGNRDMAYG                                
Sbjct: 213 MEKKPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHVPYAHYRIIQAPPSLKNRV 272

Query: 61  ----ERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDG 120
               E GRPL+++VEKLK DG+VGK + LRHKF APCVYY+F+DPEL        SKND 
Sbjct: 273 KVDREGGRPLDLIVEKLKPDGYVGKLDRLRHKFIAPCVYYFFSDPEL-------ESKNDE 332

Query: 121 SVSSTANVKKPPTEIS-RRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIV 180
           SVSSTANVKKPPTE S RR+FL FFCIPVSPGKSRLIW+FP N  KW++ IVPRWIFHI 
Sbjct: 333 SVSSTANVKKPPTETSQRRSFLVFFCIPVSPGKSRLIWSFPRNFSKWINHIVPRWIFHIG 392

Query: 181 QNLILDSDMYLLHVEEHKYEEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGGRVDWGG 240
           QNL+LDSDMY L VEEHK EEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGG+VDWGG
Sbjct: 393 QNLVLDSDMYFLRVEEHKLEEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGGQVDWGG 452

Query: 241 KYSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKALNIAEVSLQAISIAAIGALALIKHG 300
           KYSGSLPP+PPREQVFERYWSHVVNC+SCNGAYKAL IAEV LQ IS+AAIGA+AL K G
Sbjct: 453 KYSGSLPPLPPREQVFERYWSHVVNCRSCNGAYKALRIAEVGLQVISLAAIGAVALTKQG 512

Query: 301 VLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 306
           V+ A  RA IVT+AILCFAASKWLSHFIHKTFHFQVYNHALV
Sbjct: 513 VICAAARAAIVTIAILCFAASKWLSHFIHKTFHFQVYNHALV 547

[Close]

BLAST of CSPI01G29380 vs. NCBI nr
Match: KAA0055706.1 (protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa])

HSP 1 Score: 572.0 bits (1473), Expect = 3.1e-159
Identity = 280/314 (89.17%), Postives = 286/314 (91.08%), Query Frame = 0


Query: 1   MEKKPPFIPELDDPSYVKLEGNRDMAYG---------ERGRPLEMVVEKLKADGFVGKDE 60
           +EKKPPFIPELDDPSYVKLEGNRDMAYG         ERGRPLEMVVEKLKADGFVGKDE
Sbjct: 199 IEKKPPFIPELDDPSYVKLEGNRDMAYGFQVRVNTDRERGRPLEMVVEKLKADGFVGKDE 258

Query: 61  TLRHKFFAPCVYYYFTDPELVQGNVESSSKNDGSVSSTANVKKPPTEISRRTFLAFFCIP 120
           TLRHKFFAPCVYYYFTDPELVQGNVESSSKNDGS+SSTANVKKPPTEISRRTFLAFFCIP
Sbjct: 259 TLRHKFFAPCVYYYFTDPELVQGNVESSSKNDGSLSSTANVKKPPTEISRRTFLAFFCIP 318

Query: 121 VSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHVEEHKYEEIGPSNWH 180
           VSPGKSRLIWAFP N DKWVH IVPRW+FHIVQNLILDSDMYLL VEEHKYEEIG SNWH
Sbjct: 319 VSPGKSRLIWAFPNNFDKWVHSIVPRWMFHIVQNLILDSDMYLLRVEEHKYEEIGTSNWH 378

Query: 181 KACYVPVKSDALVVGFRRWLNKYAGGRVDWGGKYSGSLPPIPPREQVFERYWSHVVNCKS 240
           KACYVPVKSDA VVGFRRWLNKYAGG+VDWGGKYSGSLPP+PPREQV ERYWSHVVNCKS
Sbjct: 379 KACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPPLPPREQVLERYWSHVVNCKS 438

Query: 241 CNGAYKALNIAEVSLQAISIAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFI 300
           CNGAYKALN AEVSLQ ISIAAIGALAL K GV SA VRATI  +AILCFAASKWLSHFI
Sbjct: 439 CNGAYKALNKAEVSLQVISIAAIGALALTKSGVSSAKVRATIFIIAILCFAASKWLSHFI 498

Query: 301 HKTFHFQVYNHALV 306
           HKTF F  Y HALV
Sbjct: 499 HKTFRFHDYIHALV 512

[Close]

BLAST of CSPI01G29380 vs. NCBI nr
Match: KGN66706.2 (hypothetical protein Csa_007259 [Cucumis sativus])

HSP 1 Score: 566.6 bits (1459), Expect = 1.3e-157
Identity = 275/305 (90.16%), Postives = 284/305 (93.11%), Query Frame = 0


Query: 1   MEKKPPFIPELDDPSYVKLEGNRDMAYGERGRPLEMVVEKLKADGFVGKDETLRHKFFAP 60
           MEKKPPFIPELDDPSYVKLEGNRDMAYGERGRPLEMVVEKLKADGFVGKDETLRHKFFAP
Sbjct: 201 MEKKPPFIPELDDPSYVKLEGNRDMAYGERGRPLEMVVEKLKADGFVGKDETLRHKFFAP 260

Query: 61  CVYYYFTDPELVQGNVESSSKNDGSVSSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLI 120
           CVYYYFTDPELVQGNVE  SK DGSVSSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLI
Sbjct: 261 CVYYYFTDPELVQGNVE--SKKDGSVSSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLI 320

Query: 121 WAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHVEEHKYEEIGPSNWHKACYVPVKS 180
           WAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHVEEHKYEEIG SNWHKACYVPVKS
Sbjct: 321 WAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHVEEHKYEEIGTSNWHKACYVPVKS 380

Query: 181 DALVVGFRRWLNKYAGGRVDWGGKYSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKALN 240
           DA VVGFRRWLNKYAGG+VDWGGKYSGSLP + PR  V ERYWSHVVNCKSCNGAYKALN
Sbjct: 381 DAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPRALVLERYWSHVVNCKSCNGAYKALN 440

Query: 241 IAEVSLQAISIAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVY 300
            AEVSLQ ISIAAIG LAL ++GV+SA VRATI  +AI+CFAASKWLSHFI +TF F+ Y
Sbjct: 441 KAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIAIVCFAASKWLSHFIQETFRFRDY 500

Query: 301 NHALV 306
            HALV
Sbjct: 501 IHALV 503

[Close]

BLAST of CSPI01G29380 vs. NCBI nr
Match: XP_011660064.1 (protochlorophyllide-dependent translocon component 52, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 566.2 bits (1458), Expect = 1.7e-157
Identity = 281/342 (82.16%), Postives = 294/342 (85.96%), Query Frame = 0


Query: 1   MEKKPPFIPELDDPSYVKLEGNRDMAYG-------------------------------- 60
           +EK+PPFIPELDDPSYVKLEGNRDMAYG                                
Sbjct: 249 LEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHVPYAHYKIIPAPPSIKNRA 308

Query: 61  ----ERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDG 120
               E GRPLE+VVEKLKADGFVG+ E LRHKFFAPCVYY+FTDPELVQGNVESS+KND 
Sbjct: 309 TADREGGRPLELVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDE 368

Query: 121 SVSSTANVKKPPTEIS-RRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIV 180
           +VSSTANVKKPPTEIS RR+FL FFCIPVSPGKSRLIWAFP N  KW+++IVPRW+FHI 
Sbjct: 369 AVSSTANVKKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIG 428

Query: 181 QNLILDSDMYLLHVEEHKYEEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGGRVDWGG 240
           QNLILDSDMY L VEEHKYEEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGGRVDWGG
Sbjct: 429 QNLILDSDMYFLRVEEHKYEEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGGRVDWGG 488

Query: 241 KYSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKALNIAEVSLQAISIAAIGALALIKHG 300
           KYSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKALNIAEVSLQAIS+AAIGALALIKHG
Sbjct: 489 KYSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKALNIAEVSLQAISMAAIGALALIKHG 548

Query: 301 VLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 306
           VLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV
Sbjct: 549 VLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 590

[Close]

BLAST of CSPI01G29380 vs. NCBI nr
Match: XP_008451032.1 (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis melo])

HSP 1 Score: 563.1 bits (1450), Expect = 1.4e-156
Identity = 281/341 (82.40%), Postives = 286/341 (83.87%), Query Frame = 0


Query: 1   MEKKPPFIPELDDPSYVKLEGNRDMAYG-------------------------------- 60
           MEKKPPFIPELDDPSYVKLEGNRDMAYG                                
Sbjct: 199 MEKKPPFIPELDDPSYVKLEGNRDMAYGYEVLIENLMDLAHLPYAHYGIIPAPPPMKNRV 258

Query: 61  ----ERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDG 120
               ERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDG
Sbjct: 259 NTDRERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDG 318

Query: 121 SVSSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQ 180
           S+SSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLIWAFP N DKWVH IVPRW+FHIVQ
Sbjct: 319 SLSSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLIWAFPNNFDKWVHSIVPRWMFHIVQ 378

Query: 181 NLILDSDMYLLHVEEHKYEEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGGRVDWGGK 240
           NLILDSDMYLL VEEHKYEEIG SNWHKACYVPVKSDA VVGFRRWLNKYAGG+VDWGGK
Sbjct: 379 NLILDSDMYLLRVEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGK 438

Query: 241 YSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKALNIAEVSLQAISIAAIGALALIKHGV 300
           YSGSLPP+PPREQV ERYWSHVVNCKSCNGAYKALN AEVSLQ ISIAAIGALAL K GV
Sbjct: 439 YSGSLPPLPPREQVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGALALTKSGV 498

Query: 301 LSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 306
            SA VRATI  +AILCFAASKWLSHFIHKTF F  Y HALV
Sbjct: 499 SSAKVRATIFIIAILCFAASKWLSHFIHKTFRFHDYIHALV 539

[Close]

BLAST of CSPI01G29380 vs. NCBI nr
Match: XP_031741410.1 (protochlorophyllide-dependent translocon component 52, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 548.5 bits (1412), Expect = 3.6e-152
Identity = 275/341 (80.65%), Postives = 284/341 (83.28%), Query Frame = 0


Query: 1   MEKKPPFIPELDDPSYVKLEGNRDMAYG-------------------------------- 60
           MEKKPPFIPELDDPSYVKLEGNRDMAYG                                
Sbjct: 213 MEKKPPFIPELDDPSYVKLEGNRDMAYGYEVLIENLMDLAHLPYAHYGIMPAPPPMKNRV 272

Query: 61  ----ERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDG 120
               ERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVE  SK DG
Sbjct: 273 NTDRERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVE--SKKDG 332

Query: 121 SVSSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQ 180
           SVSSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQ
Sbjct: 333 SVSSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQ 392

Query: 181 NLILDSDMYLLHVEEHKYEEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGGRVDWGGK 240
           NLILDSDMYLLHVEEHKYEEIG SNWHKACYVPVKSDA VVGFRRWLNKYAGG+VDWGGK
Sbjct: 393 NLILDSDMYLLHVEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGK 452

Query: 241 YSGSLPPIPPREQVFERYWSHVVNCKSCNGAYKALNIAEVSLQAISIAAIGALALIKHGV 300
           YSGSLP + PR  V ERYWSHVVNCKSCNGAYKALN AEVSLQ ISIAAIG LAL ++GV
Sbjct: 453 YSGSLPSLSPRALVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGV 512

Query: 301 LSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 306
           +SA VRATI  +AI+CFAASKWLSHFI +TF F+ Y HALV
Sbjct: 513 ISAKVRATIFIIAIVCFAASKWLSHFIQETFRFRDYIHALV 551

[Close]

BLAST of CSPI01G29380 vs. TAIR 10
Match: AT4G25650.1 (ACD1-like )

HSP 1 Score: 317.8 bits (813), Expect = 9.7e-87
Identity = 169/336 (50.30%), Postives = 204/336 (60.71%), Query Frame = 0


Query: 4   KPPFIPELDDPSYVKLEGNRDMAYG---------------------------------ER 63
           KPP+IPEL+DPS+ KL GNRD+ YG                                 E 
Sbjct: 211 KPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKEKIDREG 270

Query: 64  GRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDGSVSSTA 123
           G+PLE+ V+KL   GF  K E     F APCVY   TDP   Q +   +     + S  A
Sbjct: 271 GKPLEINVKKLDNKGFFSKQEWGYSNFIAPCVYRSSTDPLPEQEHEYPAP----AASDKA 330

Query: 124 NVKKPPTEISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDS 183
            + K      RR  L F CIPVSPG+SRLIW FP N   ++  IVPRW+FHI QN ILDS
Sbjct: 331 ALSK------RRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQNTILDS 390

Query: 184 DMYLLHVEEHKYEEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGGRVDWGGKYSG-SL 243
           D++LLHVEE K  E GP NW KAC++P KSDA VV FRRW NKY+  RVDW GK+    L
Sbjct: 391 DLHLLHVEERKILERGPENWQKACFIPTKSDANVVTFRRWFNKYSEARVDWRGKFDPFLL 450

Query: 244 PPIPPREQVFERYWSHVVNCKSCNGAYKALNIAEVSLQAISIAAIGALALIKHGVLSATV 303
           PP PPREQ+F+RYWSHV NC SC  A+K LN  EV LQ  S+A IG +A++K   +S   
Sbjct: 451 PPTPPREQLFDRYWSHVENCSSCKKAHKYLNALEVILQIASVAMIGVMAVLKQTTMSNVA 510

Query: 304 RATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 306
           R  ++  A+L FAASKWLSHFI+KTFH+  YNHA+V
Sbjct: 511 RIAVLVAAVLSFAASKWLSHFIYKTFHYHDYNHAVV 536

[Close]

BLAST of CSPI01G29380 vs. TAIR 10
Match: AT4G25650.2 (ACD1-like )

HSP 1 Score: 308.9 bits (790), Expect = 4.5e-84
Identity = 169/359 (47.08%), Postives = 204/359 (56.82%), Query Frame = 0


Query: 4   KPPFIPELDDPSYVKLEGNRDMAYG----------------------------------- 63
           KPP+IPEL+DPS+ KL GNRD+ YG                                   
Sbjct: 211 KPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKGKYIICI 270

Query: 64  ---------------------ERGRPLEMVVEKLKADGFVGKDETLRHKFFAPCVYYYFT 123
                                E G+PLE+ V+KL   GF  K E     F APCVY   T
Sbjct: 271 SNSCFNPFTNLQILLAEKIDREGGKPLEINVKKLDNKGFFSKQEWGYSNFIAPCVYRSST 330

Query: 124 DPELVQGNVESSSKNDGSVSSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLIWAFPINL 183
           DP   Q +   +     + S  A + K      RR  L F CIPVSPG+SRLIW FP N 
Sbjct: 331 DPLPEQEHEYPAP----AASDKAALSK------RRLSLIFICIPVSPGRSRLIWTFPRNF 390

Query: 184 DKWVHFIVPRWIFHIVQNLILDSDMYLLHVEEHKYEEIGPSNWHKACYVPVKSDALVVGF 243
             ++  IVPRW+FHI QN ILDSD++LLHVEE K  E GP NW KAC++P KSDA VV F
Sbjct: 391 GVFIDKIVPRWVFHIGQNTILDSDLHLLHVEERKILERGPENWQKACFIPTKSDANVVTF 450

Query: 244 RRWLNKYAGGRVDWGGKYSG-SLPPIPPREQVFERYWSHVVNCKSCNGAYKALNIAEVSL 303
           RRW NKY+  RVDW GK+    LPP PPREQ+F+RYWSHV NC SC  A+K LN  EV L
Sbjct: 451 RRWFNKYSEARVDWRGKFDPFLLPPTPPREQLFDRYWSHVENCSSCKKAHKYLNALEVIL 510

Query: 304 QAISIAAIGALALIKHGVLSATVRATIVTVAILCFAASKWLSHFIHKTFHFQVYNHALV 306
           Q  S+A IG +A++K   +S   R  ++  A+L FAASKWLSHFI+KTFH+  YNHA+V
Sbjct: 511 QIASVAMIGVMAVLKQTTMSNVARIAVLVAAVLSFAASKWLSHFIYKTFHYHDYNHAVV 559

The following BLAST results are available for this feature:

BLAST of CSPI01G29380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W496	6.3e-83	47.08	Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidop...	[more]
O49931	9.3e-10	25.85	Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1	[more]

BLAST of CSPI01G29380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX74	2.9e-163	91.83	Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600180 PE=4...	[more]
A0A5A7UN46	1.5e-159	89.17	Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuw...	[more]
A0A1S3BRB5	6.9e-157	82.40	protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cuc...	[more]
A0A5D3CD90	5.1e-152	79.07	Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuw...	[more]
A0A6J1HB02	3.1e-141	73.98	protochlorophyllide-dependent translocon component 52, chloroplastic-like isofor...	[more]

BLAST of CSPI01G29380 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055706.1	3.1e-159	89.17	protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa]	[more]
KGN66706.2	1.3e-157	90.16	hypothetical protein Csa_007259 [Cucumis sativus]	[more]
XP_011660064.1	1.7e-157	82.16	protochlorophyllide-dependent translocon component 52, chloroplastic isoform X1 ...	[more]
XP_008451032.1	1.4e-156	82.40	PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-...	[more]
XP_031741410.1	3.6e-152	80.65	protochlorophyllide-dependent translocon component 52, chloroplastic isoform X1 ...	[more]

BLAST of CSPI01G29380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25650.1	9.7e-87	50.30	ACD1-like	[more]
AT4G25650.2	4.5e-84	47.08	ACD1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013626	Pheophorbide a oxygenase	PFAM	PF08417	PaO	coord: 39..149 e-value: 1.8E-26 score: 92.1
None	No IPR available	GENE3D	3.90.380.10		coord: 7..181 e-value: 1.2E-6 score: 30.4
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 7..286
None	No IPR available	PANTHER	PTHR21266:SF43	SUBFAMILY NOT NAMED	coord: 7..286
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 83..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G29380.1	CSPI01G29380.1	mRNA
CSPI01G29380.2	CSPI01G29380.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031967	organelle envelope
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity
molecular_function	GO:0046872	metal ion binding