CSPI01G29090 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTGTATGAGATAGTGTATCCATATAGATAGAATGGTAGTTTTTTTCTTCTTTAATAAAAGAATCCTTTGGAATTATTGTTAATTTGGATAAGACGTCTATTTCCTTTTTCTTTTTATTTATTGTAATATTTCGCAGTCGGAGTTCCCAAGTTCCGCTGCCACTTTCTTCCTCAGCTCGGAACTCGGAGGAGATCCCCGCACCTCCTCTGCCCACCACGGTGGTTCCTCTCCCTCAAAATTATCTGAAAGCATCAATTAAACCAATCGGACAATCGTGCAATCGGCGGATTTTCACAATAATGTCGGTGGACCCGCCTCCTTTCCAAGAAGCAGCACGCTGCGATGTCTGCAAATGTAGTTTCAATACCTTCCGGCGACGGGTACCGAATTTCTGTTTCCTCTATAATATAATCAACTTCTTTCAGATGATTCAGATTGAGCTACTGCGTATATGATCGATTTTGATTCTGTTTTGAGTCTTTTGACTTTTGAGCTGAGATTAGATTTGTTCTGCGTTTTTTTTTTTTTGTTGGAATCTTTGTTTGCAGCATCATTGCCGATGCTGTGGAAGGACGTTGTGTAATGAGCATTCTTCTTTTCAAATGGTATTCTTCTTTTTCTTTTTCTCTTTCTCGTTGATTGATTGGTTTAATGGGGAATTTATTGTGATCTGATTGGTATATTGTGTGTTCTTGTTTGTGTGAAATTCAGGCCTTGCCGCAGTTTGGTATTCATTCCTCTGTTAGAGTTTGTGCTGACTGTTTTAATAACTCCTCACAGTAAGTCATGTTTAAATTTAATCATACGCTCTGTCACATTTTTCTTTCCTTATGCGAAGTCTTTTGCAGCTTCGAACATGAAATTTCATGTTATTAGTTTCAAGTTCTATATTATTTTTCCCATAAAGATACTTGAAAGAAGACGGTTAGAAACTTACAAATTCTAACTCGAACAAATTCATCAGCGGGATAGTTTCGAAACTTTTGAAATTTTGGAGCTTGTTAATAGATATTCAGGACAAGTTAGAATCTGTGGTCCTTGTTTCTGTTGAAGAAGGGGCTTACACTAGTGCGTGCTGTTCATGAAGTTTGCACCTTTGTTTTTTATTCCATTTCTTATTTTTAGCTTTCATGTGAAGAAACCATTGAAATTTTTAGTGGGTTTCCAATCTCATTGACAATGAGAATTTTCTGCTCCTCTGTGAATTAGTGTGACTGGAACCAACATTCTAAAACCTTCTTTGAACAGTCTTTAAAGCTTAACGTCATTCAAAACCACCAATGTTGAGGTAGTTGGATATTGATGAGTGATCTGAAGGCTGATGCTTGTGTGGGATGAAGCATTAAATTTCTTACATCAGCTTTCAGCACATTCTTCTTGGATTTAATTATAAAAAATCATATACAGATTTTGGAAGCTCTTGCCTTCCCTTGTTTCCTCCTAATACTTGGTCTCTGAGGCATCCTTTTGAGCTCTCAATTTTAGGCAAAGATTGAACCTAGTATTTAGCATCTATGCCATATAGGATTACATCTATAGAGTTCAGCTTTTTTAAAAAATTATCTTTCAGTATTTAAACTTTAATGTAAAAATTATCTTCATCATATAAACAAAAACTAGTGTAAATTTATTGAATCTACTTTATTACAGTTCTAAAGGAGTTGGTCAACCACCATCGTTAGCTGTAGTTGATCAAGTAGGAGATGCAGTTTCCCAATTGAACCTTGATGGGGATCTAACTTCTGAGCCTAAACCAGCTGTGGAGCATCAACCTGCGTTGGGAATTCCAGATTGCAAGTGTGGAATGCCATTATGCATTTGTGAAACTCCAGCCCAGCCTATGGAAACAGAAGCAGTATCTTCGCAGGTTTTAATATTCAGTAATTTCTAGTGCTCCTCATGCATCAGCCCTCCCCTGATGAAACTTGATTGTTCTCATGGCAGAAAAAAACAGCTTCTACCTCTACTCAGTACAATTCAAAACCAAAGAAGACTGACTCCAATCTAAGGAATAGAGCATCTACCTCCAACAGCAAGCTTCGGTCTGTTATCTGGAGTTTGTTTTATTCTGATAGGATTGAGCCTGTTTAGATATTTTATTACCCTCTTTATCACTGTTAGTATTATTGAATTTGAAGGATAAGTCCGATTTTAATCTGCAGTTGTAACTCATATCATTAAACAGGAATCTTGCTGATGAATCGAGAATTAATTATGAAGCAAGTGGCGAGGTATATAGTCTGTATCATCTTAATATTCCTTTGATGTCTGTCAAAGGCTTTGAAGTTCCGCTTCATCTTTAGAATTTCATGTTCTTGCAGGGGCTAAGGGAAGCAGTCAAGAATGGTGACACGATTGCTGTTAAGAAACTTTTGAGCGAGGTACTTACTAAATGCGTTTATAAAAATCAAATTATGTAATGGAATTATTGACTCTTCTCATGTTGGCAGGGTGTAGATGCAAATTATCACGATAAACAAGGACTGTCTTTGCTGCATGTGGTATAAAATCTCTCTTTCTTCACCCCACCCAGGAAAACATGGCATTCATTTCAGTTTAGAGGTATAACATCAGGATTAATATTTATTTGGATGTAGGCGGCGGTCTTTAATCAGACCGATATTGTTTTTGCCCTCATTGAAGGCGGGGCTAGCCTGGACTACAAAAATGCTCAAGGTAACTACTTATCAATGTTACTGGATCTTGATAATAGTATCGAGCATAAACTGAGTGTCTTAACTTTTCTATCCATTTATACTTAAGGTGGGTCTTTGAGAATTTTGAGTGTTTAAAAAAACTGTCTTGATAACAGCTTTTGTTTTTGTATTTTATTGTTTTTCTTCTTCATAATATTATTATGTGCATTGAAATTACTGTTTTTATTTTTCAAAAAAGGAATGTCTCATTCAATTATTCAAATGTTTCTTCTGCAAAGTTTCATTCTAAAAGGCAGAGGCTGTTCCAAGAAACAAATTTCAAACAACCCTTGCTCATCAGTTATCAGTTATCCTTTTCTCTTTCTTCAAGCTAGGCGATTAAAAACCAAAGAATAGGAATAAGCATAGCTAGTTTCCGTGTGACTACAGTGAGTATAATGTTCTGGTGGTGTGTGAAAGCTGTTAAATTATGGTTAGCTTCTCTCTAGAAATTAAAGATCTTAACTCACGATTAACTTTTTATATTACTAAGGTATTATTCATTCACCATCTTGAAAAAAAGAAAAAAAACCTTTGGCCGATGTTTGTGACTGAGTTAAAGCTTGGATGTAAGATTCTTAAAGATAAGATCAGGCAATAAGTTTGCTAGAATTTTAAGTTTAGGGATGTGAAATATCTAAGAAATCTCCTATATTTTCCCTTTGGCTTTTGAAAAACTAAGCTTACAAATAGTCTGTGAGTTTCTTTGTTTTGTTATCCACTTTCTAACCATGTTTTTCTTCTAAAATCATGTATAACCTTCAACAATATCTGTTCTATCGGTTGTTTTTTTTAAATTCATGCAAAGTTTGAAAACTGAGAAAAAGTAGTTTTTGAGAACATATTTTTGTTTTTTGGAATCTAGAAATCAAATCTTACCTTAAAAGAGATGAAAGAAAATTTCAGTGTAAAGAACGGTGAGAAAACAAACACAAATTTCAAAACTTACAAAACCAAACAGTGGACTTTCACTTAGAAGTGAGCATAATTAGAGAGCTATGAAAAGGAGAGGATCTCTCTTATTTAGAGTTTTATGCGATTTGTAGACTTACACAAGTACAAGAGAGGAGGACTAAATTAGGGTACAACATTTTGTGATTACCTAAGAAAAAAAGCTGAGACTAGGGGTGAGGGTTAGTTTTTAAGAAAACCTAGTTCAGCTCGAATCAATTCGAATTATAACAGAAAATCGAACCAATTCAGTTTGGTTTCTTACACCCTGCATAATGATTCATTGTTGCCATTGCCACAGGAGAGACACCATTGGATTGTGCTCCAGCTTCTTTGCAATATAAAATACGAGAGAAGATGGAAGGACAATGAACAAATGAAGAGATGACTTAACCATCTTTTTCCAGTAAATACTTCCATAATCTCTGCACTGGTGGCTTTACTTCTAAGTAATTATATAAACCATAAATCTTTAAATTAATTTATCCTTTTAGATGCTCTCTGTAGTGAGCGGTGTTTGAGAGGCTGGATGGAAGCTTAGTTGAAAAGCTGTATTTACTTTCTAAAACAAAATAGGCAGAGAGATATTTGAATGTCACTTTGTCTCTTTAGCTTTTATATTTGTTTTTGTGCTTCCTTTGACTTTTGAGAACTGAGTTGCAAAGTTTGATCTGTGTAAGTTTGTGATATGTGATCTTATTTTATTTTATCTTTGAGTTGGTTAGTCTAGG ATTTGTATGAGATAGTGTATCCATATAGATAGAATGGTAGTTTTTTTCTTCTTTAATAAAAGAATCCTTTGGAATTATTGTTAATTTGGATAAGACGTCTATTTCCTTTTTCTTTTTATTTATTGTAATATTTCGCAGTCGGAGTTCCCAAGTTCCGCTGCCACTTTCTTCCTCAGCTCGGAACTCGGAGGAGATCCCCGCACCTCCTCTGCCCACCACGGTGGTTCCTCTCCCTCAAAATTATCTGAAAGCATCAATTAAACCAATCGGACAATCGTGCAATCGGCGGATTTTCACAATAATGTCGGTGGACCCGCCTCCTTTCCAAGAAGCAGCACGCTGCGATGTCTGCAAATGTAGTTTCAATACCTTCCGGCGACGGCATCATTGCCGATGCTGTGGAAGGACGTTGTGTAATGAGCATTCTTCTTTTCAAATGGCCTTGCCGCAGTTTGGTATTCATTCCTCTGTTAGAGTTTGTGCTGACTGTTTTAATAACTCCTCACATTCTAAAGGAGTTGGTCAACCACCATCGTTAGCTGTAGTTGATCAAGTAGGAGATGCAGTTTCCCAATTGAACCTTGATGGGGATCTAACTTCTGAGCCTAAACCAGCTGTGGAGCATCAACCTGCGTTGGGAATTCCAGATTGCAAGTGTGGAATGCCATTATGCATTTGTGAAACTCCAGCCCAGCCTATGGAAACAGAAGCAGTATCTTCGCAGAAAAAAACAGCTTCTACCTCTACTCAGTACAATTCAAAACCAAAGAAGACTGACTCCAATCTAAGGAATAGAGCATCTACCTCCAACAGCAAGCTTCGGAATCTTGCTGATGAATCGAGAATTAATTATGAAGCAAGTGGCGAGGGGCTAAGGGAAGCAGTCAAGAATGGTGACACGATTGCTGTTAAGAAACTTTTGAGCGAGGGTGTAGATGCAAATTATCACGATAAACAAGGACTGTCTTTGCTGCATGTGGCGGCGGTCTTTAATCAGACCGATATTGTTTTTGCCCTCATTGAAGGCGGGGCTAGCCTGGACTACAAAAATGCTCAAGGAGAGACACCATTGGATTGTGCTCCAGCTTCTTTGCAATATAAAATACGAGAGAAGATGGAAGGACAATGAACAAATGAAGAGATGACTTAACCATCTTTTTCCAGTAAATACTTCCATAATCTCTGCACTGGTGGCTTTACTTCTAAGTAATTATATAAACCATAAATCTTTAAATTAATTTATCCTTTTAGATGCTCTCTGTAGTGAGCGGTGTTTGAGAGGCTGGATGGAAGCTTAGTTGAAAAGCTGTATTTACTTTCTAAAACAAAATAGGCAGAGAGATATTTGAATGTCACTTTGTCTCTTTAGCTTTTATATTTGTTTTTGTGCTTCCTTTGACTTTTGAGAACTGAGTTGCAAAGTTTGATCTGTGTAAGTTTGTGATATGTGATCTTATTTTATTTTATCTTTGAGTTGGTTAGTCTAGG ATGTCGGTGGACCCGCCTCCTTTCCAAGAAGCAGCACGCTGCGATGTCTGCAAATGTAGTTTCAATACCTTCCGGCGACGGCATCATTGCCGATGCTGTGGAAGGACGTTGTGTAATGAGCATTCTTCTTTTCAAATGGCCTTGCCGCAGTTTGGTATTCATTCCTCTGTTAGAGTTTGTGCTGACTGTTTTAATAACTCCTCACATTCTAAAGGAGTTGGTCAACCACCATCGTTAGCTGTAGTTGATCAAGTAGGAGATGCAGTTTCCCAATTGAACCTTGATGGGGATCTAACTTCTGAGCCTAAACCAGCTGTGGAGCATCAACCTGCGTTGGGAATTCCAGATTGCAAGTGTGGAATGCCATTATGCATTTGTGAAACTCCAGCCCAGCCTATGGAAACAGAAGCAGTATCTTCGCAGAAAAAAACAGCTTCTACCTCTACTCAGTACAATTCAAAACCAAAGAAGACTGACTCCAATCTAAGGAATAGAGCATCTACCTCCAACAGCAAGCTTCGGAATCTTGCTGATGAATCGAGAATTAATTATGAAGCAAGTGGCGAGGGGCTAAGGGAAGCAGTCAAGAATGGTGACACGATTGCTGTTAAGAAACTTTTGAGCGAGGGTGTAGATGCAAATTATCACGATAAACAAGGACTGTCTTTGCTGCATGTGGCGGCGGTCTTTAATCAGACCGATATTGTTTTTGCCCTCATTGAAGGCGGGGCTAGCCTGGACTACAAAAATGCTCAAGGAGAGACACCATTGGATTGTGCTCCAGCTTCTTTGCAATATAAAATACGAGAGAAGATGGAAGGACAATGA MSVDPPPFQEAARCDVCKCSFNTFRRRHHCRCCGRTLCNEHSSFQMALPQFGIHSSVRVCADCFNNSSHSKGVGQPPSLAVVDQVGDAVSQLNLDGDLTSEPKPAVEHQPALGIPDCKCGMPLCICETPAQPMETEAVSSQKKTASTSTQYNSKPKKTDSNLRNRASTSNSKLRNLADESRINYEASGEGLREAVKNGDTIAVKKLLSEGVDANYHDKQGLSLLHVAAVFNQTDIVFALIEGGASLDYKNAQGETPLDCAPASLQYKIREKMEGQ* Homology
BLAST of CSPI01G29090 vs. ExPASy Swiss-Prot
Match: Q6FQJ1 (Vacuolar protein sorting-associated protein 27 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=VPS27 PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11 Identity = 48/168 (28.57%), Postives = 74/168 (44.05%), Query Frame = 0
BLAST of CSPI01G29090 vs. ExPASy Swiss-Prot
Match: Q755J9 (Vacuolar protein sorting-associated protein 27 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=VPS27 PE=3 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10 Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0
BLAST of CSPI01G29090 vs. ExPASy Swiss-Prot
Match: Q17AN2 (Lateral signaling target protein 2 homolog OS=Aedes aegypti OX=7159 GN=AAEL005241 PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.8e-10 Identity = 29/58 (50.00%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of CSPI01G29090 vs. ExPASy Swiss-Prot
Match: B4NFJ7 (Lateral signaling target protein 2 homolog OS=Drosophila willistoni OX=7260 GN=GK22512 PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.8e-10 Identity = 30/68 (44.12%), Postives = 38/68 (55.88%), Query Frame = 0
BLAST of CSPI01G29090 vs. ExPASy Swiss-Prot
Match: Q7QAJ2 (Lateral signaling target protein 2 homolog OS=Anopheles gambiae OX=7165 GN=AGAP003678 PE=3 SV=6) HSP 1 Score: 66.6 bits (161), Expect = 4.9e-10 Identity = 30/67 (44.78%), Postives = 39/67 (58.21%), Query Frame = 0
BLAST of CSPI01G29090 vs. ExPASy TrEMBL
Match: A0A0A0LWS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598850 PE=4 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 1.4e-153 Identity = 273/275 (99.27%), Postives = 274/275 (99.64%), Query Frame = 0
BLAST of CSPI01G29090 vs. ExPASy TrEMBL
Match: A0A5A7UKZ2 (Vacuolar protein sorting-associated protein 27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001170 PE=4 SV=1) HSP 1 Score: 532.3 bits (1370), Expect = 1.2e-147 Identity = 263/275 (95.64%), Postives = 267/275 (97.09%), Query Frame = 0
BLAST of CSPI01G29090 vs. ExPASy TrEMBL
Match: A0A6J1JJ55 (myotubularin-related protein 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485580 PE=4 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 4.5e-139 Identity = 250/275 (90.91%), Postives = 256/275 (93.09%), Query Frame = 0
BLAST of CSPI01G29090 vs. ExPASy TrEMBL
Match: A0A6J1H9N2 (vacuolar protein sorting-associated protein 27-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461389 PE=4 SV=1) HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138 Identity = 251/276 (90.94%), Postives = 259/276 (93.84%), Query Frame = 0
BLAST of CSPI01G29090 vs. ExPASy TrEMBL
Match: A0A6J1JGT2 (myotubularin-related protein 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485580 PE=4 SV=1) HSP 1 Score: 497.3 bits (1279), Expect = 4.2e-137 Identity = 249/275 (90.55%), Postives = 255/275 (92.73%), Query Frame = 0
BLAST of CSPI01G29090 vs. NCBI nr
Match: XP_004144059.1 (vacuolar protein sorting-associated protein 27 [Cucumis sativus] >KGN66340.1 hypothetical protein Csa_007134 [Cucumis sativus]) HSP 1 Score: 552.0 bits (1421), Expect = 3.0e-153 Identity = 273/275 (99.27%), Postives = 274/275 (99.64%), Query Frame = 0
BLAST of CSPI01G29090 vs. NCBI nr
Match: KAA0055738.1 (vacuolar protein sorting-associated protein 27 [Cucumis melo var. makuwa] >TYK09987.1 vacuolar protein sorting-associated protein 27 [Cucumis melo var. makuwa]) HSP 1 Score: 532.3 bits (1370), Expect = 2.4e-147 Identity = 263/275 (95.64%), Postives = 267/275 (97.09%), Query Frame = 0
BLAST of CSPI01G29090 vs. NCBI nr
Match: XP_038878461.1 (vacuolar protein sorting-associated protein 27 [Benincasa hispida]) HSP 1 Score: 504.2 bits (1297), Expect = 7.1e-139 Identity = 250/274 (91.24%), Postives = 258/274 (94.16%), Query Frame = 0
BLAST of CSPI01G29090 vs. NCBI nr
Match: XP_023516961.1 (vacuolar protein sorting-associated protein 27-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 504.2 bits (1297), Expect = 7.1e-139 Identity = 252/276 (91.30%), Postives = 259/276 (93.84%), Query Frame = 0
BLAST of CSPI01G29090 vs. NCBI nr
Match: KAG6590065.1 (Lateral signaling target protein 2-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 504.2 bits (1297), Expect = 7.1e-139 Identity = 252/276 (91.30%), Postives = 259/276 (93.84%), Query Frame = 0
BLAST of CSPI01G29090 vs. TAIR 10
Match: AT2G26210.1 (Ankyrin repeat family protein ) HSP 1 Score: 164.5 bits (415), Expect = 1.2e-40 Identity = 88/162 (54.32%), Postives = 116/162 (71.60%), Query Frame = 0
BLAST of CSPI01G29090 vs. TAIR 10
Match: AT2G26210.2 (Ankyrin repeat family protein ) HSP 1 Score: 164.5 bits (415), Expect = 1.2e-40 Identity = 88/162 (54.32%), Postives = 116/162 (71.60%), Query Frame = 0
BLAST of CSPI01G29090 vs. TAIR 10
Match: AT2G26210.3 (Ankyrin repeat family protein ) HSP 1 Score: 164.5 bits (415), Expect = 1.2e-40 Identity = 88/162 (54.32%), Postives = 116/162 (71.60%), Query Frame = 0
BLAST of CSPI01G29090 vs. TAIR 10
Match: AT3G58760.1 (Integrin-linked protein kinase family ) HSP 1 Score: 50.8 bits (120), Expect = 2.0e-06 Identity = 24/60 (40.00%), Postives = 34/60 (56.67%), Query Frame = 0
BLAST of CSPI01G29090 vs. TAIR 10
Match: AT4G18950.1 (Integrin-linked protein kinase family ) HSP 1 Score: 49.7 bits (117), Expect = 4.4e-06 Identity = 26/69 (37.68%), Postives = 36/69 (52.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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