CSPI01G26790 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G26790
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ribosome biogenesis protein BRX1-like
Location	Chr1: 21834524 .. 21837838 (+)
RNA-Seq Expression	CSPI01G26790
Synteny	CSPI01G26790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAGAAGAGGAAGCATAGTGAGTCTTTGCCGACGGTATCGGTTAAGAAGGACGATGATGCTCCGGAGAGACCTAAGCGGACACTTATGGGCTGGAAAGACAAAAAAGTGACAAAAGAGAGTGAAGTTGGTTCTGATCATGCTGTTTTTCGAAATAAAGAAAAGGTTCTCGTCACGTGTTCCCGTCGAATCAATTTTAGGTATGTAATATAGTTGAAACAAGTTGTTGTAGCTTTTTGTAAAATACATTGTTAGGTCTGTACATGGTTAGGTAGTTTGCAGTGTACTTATCACTCATTCACCAAATGTTTTTTGTTTTTCTTCCCTTTAGAATTTTTGGCAATTTAACTTGTGATTGATTAGGTATTGGCATTTGATGTTGAATATGGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTTGAGGTCCAGCAAGGGTGCAACACTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCCAGCCTATTTTTCGAGGTTAGAACCTTTCCATTACACTGTTGTAATCTGGAATTTTTAAGGTACAATGTTTTCTAATTTTTATTTTTTATTAGATATAGGATGATAACATTTTGGTTTTATTCTCGTGGTGTATAACTTATAAGGATGTTTTAACTATCCTTTTGCTTTTCATTATATTACTTTCCTATGTGGCCTTCTCATCATGTTTGTACATTGCCATCATATTTTTCCACTCACTGTTCTTTTTTTCTCTAATTCCAGTGCAGAAAACATAAAGATCTTTATCTATGTATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCGGTAAATTTAACTTGTATTCAAATTTTATTACTGGGTTACTAAAATTTTATTTGATTTCTTTATTAAATGAAGTTTTCTTACTTGTCCATTTTTTTTGCTTTCAGTGCATACAATGGAAGAATTGAAGCTTACAGGGAACCATCTGAAAGGTTCCCGTCCAATTTTGACATTTTCATCAAATTTTGATAAAGATGTCCACTAGAAACTTCTGAAGGAAATGATTATTCAGGTACCAATGGCAAAGTTTTGTCTTTAACAATTAATTTTTGAATGTTGAAATGATTTTTCATTCTTACTCGTGGATCAATGTATGAGGCAAATGTCAATTTCCTTGTCTTTCTTCATTAAACGCATTTTTTGCTCATTTCCTTGCTCCTTCAATCCAAAGCTAACATCGTATTGAATTGATAAAATAGTCTGCATGACTGTAGTCGAAGTAGCTTCTTTCAGTTTTTTCTTATGGAAAGAAAAATGAAAGATATTCGTAATGCACTTCTTTCATGTAATATCATGGCATAAGAATAAGGTTAATGAATACTTGTGCCCATTCTAAAATGCCAGTGCCTCACCACTATTATTCTCTTTTCATGCTGCCTTTATTAATTTCTGATTTCACATATGCATATTTACTATGTTGTGAAAAGTATGTAGATCCTTGCTGCTTCTCCAAATAATGGCATTTTTTAAAACGATTGCTATTAACTCTTGTTTTACATGACATACTTTTATCTCACCAATGTGTGTTAAGGTATATATGGATAAATGTCAGAAGTGTCGTCCTTAAGATATGAGGCGCACAATTGTCATTAGGAAAGGAATTCAGCATGGCAAAAAATTAATTGATTTGAAGAGTTTGAGATTAAGCAGATTTTGGGGAATAGTTTTTAGGAGTCCTAGTTGGGGATCTTGCTATTTTTCTTTCTTATGTCAATGATTTCATTGTTTTTCTAGTTCACTGTATACATTTCCATATAATTGATTGTTATCCTTTAAACTTACATGTTCAATTTTCCATCAACTGTTGGTATGAGAACCCACTTTATGTATCGCCAAACCAGGTTAGATTGATTGTCCAACTTTTTGATCATTTGGGATTACACTTCTTCACACTATTATTTAATGATCGTTTGCCTAATGTAGTCCATTATTTAATGATATGGTGCTTGTCTTCTTTGTTTGGTGTGATCAGATATCTGTTCCACATAATGAATCAGATAAAGTGGCTCGAGGAGGACTAGATAAAATGACACTCATTGAGGTTATTCAAATTCCACTTCCTGTTTAGTTTATAAGTGGGTTTTCACAATTTTTTTCACGGACTTCAAATAATTGCATTTTACAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCTACCCTATATGAGAACCCACTTTATGTATCGCCAAACCAGGTTAGATCGTCCAACTTTTTGATCATTTGGGATTACACTTCTTCACACCCTTATGCACCCTTAGTATCAAAATGTCATATGTCACTCCCTCCATATATCATCTACATTGTCATGTGTCTGAAAGATAATAACCTTTAATCTAGAGTTCATATAATCCACCTCATACATGTCAAATTGTCTATAAATAGTGAATATTATATTTTTTGCTTTTAAATTTGGGTTATAAAAACAGCTGAGAATTTACATTTGCATTAGTTATATCCAAAAGAAAACTACTATCTGGGTTCTTTTCTATAGATTGCTAAACTATGTTCTTGAATTCTAAAATAAAGAAGAGAAAACCATATGCTGAGGACACATTAGCTATGTTTTTCCAGTTTCTTTTAAGTTCATATTTGACCATAGATTAAAGTATTGGAATTACGCAAAGCCCAAATAATCACTATCTTTTTCAATTCAAGGTTATTTGTGATTCCAACTATAGTCTCACTAATTGTATGACCAACTAGAAGTTTTTTTTGTAATCCTTTGGATTGGATGTCATATTTTGTTAACTTTGTCGATGTTATTCATGTCATTTTGTAGATTCGAGCATTGGAGAAGAAACAGAAGGCTGGTAAATACTCAAAGAAAGTCAAAGCGAAAACGAGGAGGAAGATGCACGAGTTATCGAATCCATTGGAACCTGACGAGTTTGCTGATATGTGGAAGGAACAGTAGTATTTCAATAGACTTAATTTAAGCCAAGACTCGATCATAATTCCTTGCCTCTTGAAATGGGATTTTTGTTCTATAATACTAGCAAGTGTAATGCAAATTTTGTCCTGGTTTATTTAAACCTTGAGGTGTATGTTTCTCTATCTTCAATGTATCTCTTAGTCCAATACTTGGGAGTTTAGATATGCTTTTACAAGATCAAAGGGCATCTCATATGTTTTACTTTCTGTTACCAAAAAATAGTTCCGAACGAAAACGCATATAAGATCATTTAATTTTTATGATTTTGTTTACTTAAAGAAAAAAAGCGATTATGCAAACGAG

mRNA sequence

ATGGCAAAGAAGAGGAAGCATAGTGAGTCTTTGCCGACGGTATCGGTTAAGAAGGACGATGATGCTCCGGAGAGACCTAAGCGGACACTTATGGGCTGGAAAGACAAAAAAGTGACAAAAGAGAGTGAAGTTGGTTCTGATCATGCTGTTTTTCGAAATAAAGAAAAGGTTCTCGTCACGTGTTCCCGTCGAATCAATTTTAGGTATTGGCATTTGATGTTGAATATGGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTTGAGGTCCAGCAAGGGTGCAACACTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCCAGCCTATTTTTCGAGTGCAGAAAACATAAAGATCTTTATCTATGTATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCGTGCATACAATGGAAGAATTGAAGCTTACAGGGAACCATCTGAAAGGTTCCCGTCCAATTTTGACATTTTCATCAAATTTTGATAAAGATATATCTGTTCCACATAATGAATCAGATAAAGTGGCTCGAGGAGGACTAGATAAAATGACACTCATTGAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCTACCCTATATGAGAACCCACTTTATGTATCGCCAAACCAGATTCGAGCATTGGAGAAGAAACAGAAGGCTGGTAAATACTCAAAGAAAGTCAAAGCGAAAACGAGGAGGAAGATGCACGAGTTATCGAATCCATTGGAACCTGACGAGTTTGCTGATATGTGGAAGGAACAGTAGTATTTCAATAGACTTAATTTAAGCCAAGACTCGATCATAATTCCTTGCCTCTTGAAATGGGATTTTTGTTCTATAATACTAGCAAGTGTAATGCAAATTTTGTCCTGGTTTATTTAAACCTTGAGGTGTATGTTTCTCTATCTTCAATGTATCTCTTAGTCCAATACTTGGGAGTTTAGATATGCTTTTACAAGATCAAAGGGCATCTCATATGTTTTACTTTCTGTTACCAAAAAATAGTTCCGAACGAAAACGCATATAAGATCATTTAATTTTTATGATTTTGTTTACTTAAAGAAAAAAAGCGATTATGCAAACGAG

Coding sequence (CDS)

ATGGCAAAGAAGAGGAAGCATAGTGAGTCTTTGCCGACGGTATCGGTTAAGAAGGACGATGATGCTCCGGAGAGACCTAAGCGGACACTTATGGGCTGGAAAGACAAAAAAGTGACAAAAGAGAGTGAAGTTGGTTCTGATCATGCTGTTTTTCGAAATAAAGAAAAGGTTCTCGTCACGTGTTCCCGTCGAATCAATTTTAGGTATTGGCATTTGATGTTGAATATGGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTTGAGGTCCAGCAAGGGTGCAACACTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCCAGCCTATTTTTCGAGTGCAGAAAACATAAAGATCTTTATCTATGTATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCGTGCATACAATGGAAGAATTGAAGCTTACAGGGAACCATCTGAAAGGTTCCCGTCCAATTTTGACATTTTCATCAAATTTTGATAAAGATATATCTGTTCCACATAATGAATCAGATAAAGTGGCTCGAGGAGGACTAGATAAAATGACACTCATTGAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCTACCCTATATGAGAACCCACTTTATGTATCGCCAAACCAGATTCGAGCATTGGAGAAGAAACAGAAGGCTGGTAAATACTCAAAGAAAGTCAAAGCGAAAACGAGGAGGAAGATGCACGAGTTATCGAATCCATTGGAACCTGACGAGTTTGCTGATATGTGGAAGGAACAGTAG

Protein sequence

MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVTCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDISVPHNESDKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKEQ*

Homology

[Close]

BLAST of CSPI01G26790 vs. ExPASy Swiss-Prot
Match: Q9LE16 (Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-1 PE=2 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 1.9e-118
Identity = 218/317 (68.77%), Postives = 240/317 (75.71%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           M +KRKHSE++    VK  D APERP+RTL+GWKDKK   E+   +  +VFRNKEKVLVT
Sbjct: 1   MGRKRKHSETVTAAPVK--DSAPERPQRTLLGWKDKKEDAENSKPAYASVFRNKEKVLVT 60

Query: 61  CSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRY HLMLNMVSLLPHCKKD+KVE +SS+GATLNEL+ELKG SS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECRKHK 120

Query: 121 DLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD--------- 180
           DLY+ M K P GPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNF+ D         
Sbjct: 121 DLYMWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFENDAHWKLLKEM 180

Query: 181 -------------------------------------ISVPHNESDKVARGGLDKMTLIE 240
                                                ISVPHNESDK+ARG LDKMTLIE
Sbjct: 181 LTQIFGIPEGHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKIARGDLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 272
           VGPRFCLNPIKIFGGSFGG TLYENP YVSPNQIRALEK+ KAGK++KK+KAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGTTLYENPFYVSPNQIRALEKRNKAGKFAKKIKAKTRRKMHE 300

[Close]

BLAST of CSPI01G26790 vs. ExPASy Swiss-Prot
Match: Q9C928 (Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-2 PE=2 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 2.8e-114
Identity = 213/318 (66.98%), Postives = 239/318 (75.16%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDD-APERPKRTLMGWKDKKVTK-ESEVGSDHAVFRNKEKVL 60
           M +KRKHSE+     VKK D+ AP+RPKRTL+GWKDK   + E       + F+NKEKVL
Sbjct: 1   MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSEGEAEKAKALTSSGFKNKEKVL 60

Query: 61  VTCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRI+FRY  LMLN+VSLLPHCKKD+KVE +SSKGATLNEL+ELK  +S LFFECRK
Sbjct: 61  VTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFECRK 120

Query: 121 HKDLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD------- 180
           HKDLY+ M K P+GPSVKFLV AVH MEE+KLTGNHLKGSRP+LTFSSNFDKD       
Sbjct: 121 HKDLYMWMVKSPNGPSVKFLVKAVHAMEEMKLTGNHLKGSRPLLTFSSNFDKDAHWKLLK 180

Query: 181 ---------------------------------------ISVPHNESDKVARGGLDKMTL 240
                                                  ISVPHNESDK+A+GGLDKMTL
Sbjct: 181 EMLTQVFGIPKEHRKSKPYHDHVFVFSIVDEHIWFRNYQISVPHNESDKIAKGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 271
           IEVGPRFCLNPIKIF GSFGGPTLYENPLYVSPNQIRALEK+ KAGK++KK+KAKTR+KM
Sbjct: 241 IEVGPRFCLNPIKIFAGSFGGPTLYENPLYVSPNQIRALEKRNKAGKFAKKIKAKTRKKM 300

[Close]

BLAST of CSPI01G26790 vs. ExPASy Swiss-Prot
Match: Q5RAN2 (Ribosome biogenesis protein BRX1 homolog OS=Pongo abelii OX=9601 GN=BRIX1 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 9.7e-43
Identity = 104/253 (41.11%), Postives = 145/253 (57.31%), Query Frame = 0


Query: 51  FRNKEKVLVTCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSS 110
           ++NKE++L+  SR INFR  HLM ++  L+PH K D K++ R  K   +NE+ E+K C+ 
Sbjct: 56  WKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNK 115

Query: 111 SLFFECRKHKDLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFD- 170
            ++FE +K +DLY+ ++  P GPS KFLV  +HT+ ELK+TGN LKGSRP+L+F   FD 
Sbjct: 116 CIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDE 175

Query: 171 ------------KDISVP--HNES----DKVARGGL--------------DKMTLIEVGP 230
                       + +S P  H +S    D V    +              +   L+E+GP
Sbjct: 176 LPHYALLKELLIQILSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQIIEEDAALVEIGP 235

Query: 231 RFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMH--EL 269
           RF LN IKIF GSFGGPTLYENP Y SPN  R + +   A KY +K + K  +K+   E 
Sbjct: 236 RFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVTRSITAAKYREKQQVKDVQKLRKKEP 295

[Close]

BLAST of CSPI01G26790 vs. ExPASy Swiss-Prot
Match: Q3SZZ0 (Ribosome biogenesis protein BRX1 homolog OS=Bos taurus OX=9913 GN=BRIX1 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.8e-42
Identity = 104/253 (41.11%), Postives = 144/253 (56.92%), Query Frame = 0


Query: 51  FRNKEKVLVTCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSS 110
           ++NKE++L+  SR INFR  HLM ++  L+PH K D K++ R  K   +NE+ E+K C+ 
Sbjct: 56  WKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNK 115

Query: 111 SLFFECRKHKDLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFD- 170
            ++FE +K +DLY+ ++  P GPS KFLV  +HT+ ELK+TGN LKGSRP+L+F   FD 
Sbjct: 116 CIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDE 175

Query: 171 ------------KDISVP--HNES----DKVARGGL--------------DKMTLIEVGP 230
                       +  S P  H +S    D V    +              +   L+E+GP
Sbjct: 176 LPHYALLKELLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQIIEEDAALVEIGP 235

Query: 231 RFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMH--EL 269
           RF LN IKIF GSFGGPTLYENP Y SPN  R + +   A KY +K + K  +K+   E 
Sbjct: 236 RFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVIRSITAAKYREKQQVKDVQKLRKKEP 295

[Close]

BLAST of CSPI01G26790 vs. ExPASy Swiss-Prot
Match: Q8TDN6 (Ribosome biogenesis protein BRX1 homolog OS=Homo sapiens OX=9606 GN=BRIX1 PE=1 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 2.8e-42
Identity = 104/253 (41.11%), Postives = 144/253 (56.92%), Query Frame = 0


Query: 51  FRNKEKVLVTCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSS 110
           ++NKE++L+  SR INFR  HLM ++  L+PH K D K++ R  K   +NE+ E+K C+ 
Sbjct: 56  WKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNK 115

Query: 111 SLFFECRKHKDLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFD- 170
            ++FE +K +DLY+ ++  P GPS KFLV  +HT+ ELK+TGN LKGSRP+L+F   FD 
Sbjct: 116 CIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDE 175

Query: 171 ------------KDISVP--HNES----DKVARGGL--------------DKMTLIEVGP 230
                       +  S P  H +S    D V    +              +   L+E+GP
Sbjct: 176 LPHYALLKELLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQIIEEDAALVEIGP 235

Query: 231 RFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMH--EL 269
           RF LN IKIF GSFGGPTLYENP Y SPN  R + +   A KY +K + K  +K+   E 
Sbjct: 236 RFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVIRSITAAKYREKQQVKDVQKLRKKEP 295

[Close]

BLAST of CSPI01G26790 vs. ExPASy TrEMBL
Match: A0A1S3BQS3 (ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE=3 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 2.6e-139
Identity = 259/316 (81.96%), Postives = 265/316 (83.86%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           MAKKRKHSE++PTVSVKKD++A ERPKRTLMGWKDK+VTK+SE GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD--------- 180
           DLYL MAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD         
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 -------------------------------------ISVPHNESDKVARGGLDKMTLIE 240
                                                ISVPHNESDKVARGGLDKMTLIE
Sbjct: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 271
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

[Close]

BLAST of CSPI01G26790 vs. ExPASy TrEMBL
Match: A0A5D3CG95 (Ribosome biogenesis protein BRX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003710 PE=3 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 2.6e-139
Identity = 259/316 (81.96%), Postives = 265/316 (83.86%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           MAKKRKHSE++PTVSVKKD++A ERPKRTLMGWKDK+VTK+SE GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD--------- 180
           DLYL MAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD         
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 -------------------------------------ISVPHNESDKVARGGLDKMTLIE 240
                                                ISVPHNESDKVARGGLDKMTLIE
Sbjct: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 271
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

[Close]

BLAST of CSPI01G26790 vs. ExPASy TrEMBL
Match: A0A6J1E0T2 (ribosome biogenesis protein BRX1 homolog 1-like OS=Momordica charantia OX=3673 GN=LOC111026105 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.6e-136
Identity = 256/317 (80.76%), Postives = 263/317 (82.97%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           MAKKRKHSE+L +V+VKKD DAPERPKRTLMGWKDK+V KESE GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD--------- 180
           DLYL MAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD         
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 -------------------------------------ISVPHNES-DKVARGGLDKMTLI 240
                                                I+VPHNES DKVARGGLDK+TLI
Sbjct: 181 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 240

Query: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMH 271
           EVGPRFCLNPIKIFGGSFGGPTLYENPLY+SPNQIRALEKKQKAGKYSKKVKAKTRRKMH
Sbjct: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQIRALEKKQKAGKYSKKVKAKTRRKMH 300

[Close]

BLAST of CSPI01G26790 vs. ExPASy TrEMBL
Match: A0A6J1EW75 (ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437121 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.3e-135
Identity = 252/316 (79.75%), Postives = 259/316 (81.96%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           M KKRKHSE+LP VSVKKD+ APERPKRTL GWKDK+V KE+E GSDHAVFRNKEKVLVT
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRY HLMLN+VSLLPHCKKDNKVE RSSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 121 DLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD--------- 180
           DLYL M+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKD         
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 181 -------------------------------------ISVPHNESDKVARGGLDKMTLIE 240
                                                ISVPHNESDKVARGGLDKMTLIE
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 271
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

[Close]

BLAST of CSPI01G26790 vs. ExPASy TrEMBL
Match: A0A6J1HZ18 (ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467904 PE=3 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 252/314 (80.25%), Postives = 257/314 (81.85%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           M KKRKHSE+LP VSVKKDD APER KRTL GWKDK+VT +SE  SDHAVFRNKEKVLVT
Sbjct: 1   MVKKRKHSETLPAVSVKKDDVAPERSKRTLTGWKDKEVTTKSESDSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRY HLMLNMVSLLPHCKKDNKVE RS+KGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD--------- 180
           DLYL MAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD         
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDAHWKLLKEI 180

Query: 181 -------------------------------------ISVPHNESDKVARGGLDKMTLIE 240
                                                I+VPHNESDKVARGGLDKMTLIE
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 269
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

[Close]

BLAST of CSPI01G26790 vs. NCBI nr
Match: XP_011659901.2 (ribosome biogenesis protein BRX1 homolog 1 [Cucumis sativus] >XP_031743378.1 ribosome biogenesis protein BRX1 homolog 1 [Cucumis sativus] >XP_031743380.1 ribosome biogenesis protein BRX1 homolog 1 [Cucumis sativus])

HSP 1 Score: 523.9 bits (1348), Expect = 8.5e-145
Identity = 268/317 (84.54%), Postives = 269/317 (84.86%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD--------- 180
           DLYLCMAKCPSGPSVKFLVNA+HTMEELKLTGNHLKGSRPILTFSSNFDKD         
Sbjct: 121 DLYLCMAKCPSGPSVKFLVNAMHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 -------------------------------------ISVPHNESDKVARGGLDKMTLIE 240
                                                ISVPHNESDKVARGGLDKMTLIE
Sbjct: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 272
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

[Close]

BLAST of CSPI01G26790 vs. NCBI nr
Match: XP_008450669.1 (PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450670.1 PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450671.1 PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >TYK10224.1 ribosome biogenesis protein BRX1-like [Cucumis melo var. makuwa])

HSP 1 Score: 504.6 bits (1298), Expect = 5.3e-139
Identity = 259/316 (81.96%), Postives = 265/316 (83.86%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           MAKKRKHSE++PTVSVKKD++A ERPKRTLMGWKDK+VTK+SE GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD--------- 180
           DLYL MAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD         
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 -------------------------------------ISVPHNESDKVARGGLDKMTLIE 240
                                                ISVPHNESDKVARGGLDKMTLIE
Sbjct: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 271
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

[Close]

BLAST of CSPI01G26790 vs. NCBI nr
Match: XP_038879963.1 (ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida] >XP_038879964.1 ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida] >XP_038879966.1 ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida])

HSP 1 Score: 495.7 bits (1275), Expect = 2.5e-136
Identity = 254/316 (80.38%), Postives = 260/316 (82.28%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           MAKKRK SE+LPTVS KKD++APERPKRTLMGWKD++V KE E GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKRSETLPTVSTKKDENAPERPKRTLMGWKDREVAKECEAGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD--------- 180
           DLYL MAKCPSGPSVKFLVNAVHTMEELKLTGNHLK SRPILTFSSNFDKD         
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKSSRPILTFSSNFDKDVHWKLLKEI 180

Query: 181 -------------------------------------ISVPHNESDKVARGGLDKMTLIE 240
                                                I+VPHNESDKVARGGLDKMTLIE
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 271
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAK RRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKMRRKMHE 300

[Close]

BLAST of CSPI01G26790 vs. NCBI nr
Match: XP_038894805.1 (ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida])

HSP 1 Score: 495.4 bits (1274), Expect = 3.2e-136
Identity = 254/316 (80.38%), Postives = 261/316 (82.59%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           M KKRKHSE+LP  SVKKDD A ERPKRTLMGWKDK+V+KES+ GSDHA+FRNKEKVLVT
Sbjct: 1   MVKKRKHSETLPAESVKKDDAALERPKRTLMGWKDKEVSKESDSGSDHAIFRNKEKVLVT 60

Query: 61  CSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRY HLMLN+VSLLPHCKKDNKVE RSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD--------- 180
           DLYL MAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD         
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180

Query: 181 -------------------------------------ISVPHNESDKVARGGLDKMTLIE 240
                                                I+VPHNESDKVARGGLDKMTLIE
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 271
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

[Close]

BLAST of CSPI01G26790 vs. NCBI nr
Match: XP_022159792.1 (ribosome biogenesis protein BRX1 homolog 1-like [Momordica charantia])

HSP 1 Score: 495.4 bits (1274), Expect = 3.2e-136
Identity = 256/317 (80.76%), Postives = 263/317 (82.97%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           MAKKRKHSE+L +V+VKKD DAPERPKRTLMGWKDK+V KESE GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD--------- 180
           DLYL MAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD         
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 -------------------------------------ISVPHNES-DKVARGGLDKMTLI 240
                                                I+VPHNES DKVARGGLDK+TLI
Sbjct: 181 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 240

Query: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMH 271
           EVGPRFCLNPIKIFGGSFGGPTLYENPLY+SPNQIRALEKKQKAGKYSKKVKAKTRRKMH
Sbjct: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQIRALEKKQKAGKYSKKVKAKTRRKMH 300

[Close]

BLAST of CSPI01G26790 vs. TAIR 10
Match: AT3G15460.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 426.8 bits (1096), Expect = 1.3e-119
Identity = 218/317 (68.77%), Postives = 240/317 (75.71%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           M +KRKHSE++    VK  D APERP+RTL+GWKDKK   E+   +  +VFRNKEKVLVT
Sbjct: 1   MGRKRKHSETVTAAPVK--DSAPERPQRTLLGWKDKKEDAENSKPAYASVFRNKEKVLVT 60

Query: 61  CSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRY HLMLNMVSLLPHCKKD+KVE +SS+GATLNEL+ELKG SS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECRKHK 120

Query: 121 DLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD--------- 180
           DLY+ M K P GPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNF+ D         
Sbjct: 121 DLYMWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFENDAHWKLLKEM 180

Query: 181 -------------------------------------ISVPHNESDKVARGGLDKMTLIE 240
                                                ISVPHNESDK+ARG LDKMTLIE
Sbjct: 181 LTQIFGIPEGHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKIARGDLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 272
           VGPRFCLNPIKIFGGSFGG TLYENP YVSPNQIRALEK+ KAGK++KK+KAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGTTLYENPFYVSPNQIRALEKRNKAGKFAKKIKAKTRRKMHE 300

[Close]

BLAST of CSPI01G26790 vs. TAIR 10
Match: AT1G52930.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 412.9 bits (1060), Expect = 2.0e-115
Identity = 213/318 (66.98%), Postives = 239/318 (75.16%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDD-APERPKRTLMGWKDKKVTK-ESEVGSDHAVFRNKEKVL 60
           M +KRKHSE+     VKK D+ AP+RPKRTL+GWKDK   + E       + F+NKEKVL
Sbjct: 1   MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSEGEAEKAKALTSSGFKNKEKVL 60

Query: 61  VTCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRI+FRY  LMLN+VSLLPHCKKD+KVE +SSKGATLNEL+ELK  +S LFFECRK
Sbjct: 61  VTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFECRK 120

Query: 121 HKDLYLCMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD------- 180
           HKDLY+ M K P+GPSVKFLV AVH MEE+KLTGNHLKGSRP+LTFSSNFDKD       
Sbjct: 121 HKDLYMWMVKSPNGPSVKFLVKAVHAMEEMKLTGNHLKGSRPLLTFSSNFDKDAHWKLLK 180

Query: 181 ---------------------------------------ISVPHNESDKVARGGLDKMTL 240
                                                  ISVPHNESDK+A+GGLDKMTL
Sbjct: 181 EMLTQVFGIPKEHRKSKPYHDHVFVFSIVDEHIWFRNYQISVPHNESDKIAKGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 271
           IEVGPRFCLNPIKIF GSFGGPTLYENPLYVSPNQIRALEK+ KAGK++KK+KAKTR+KM
Sbjct: 241 IEVGPRFCLNPIKIFAGSFGGPTLYENPLYVSPNQIRALEKRNKAGKFAKKIKAKTRKKM 300

The following BLAST results are available for this feature:

BLAST of CSPI01G26790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE16	1.9e-118	68.77	Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
Q9C928	2.8e-114	66.98	Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
Q5RAN2	9.7e-43	41.11	Ribosome biogenesis protein BRX1 homolog OS=Pongo abelii OX=9601 GN=BRIX1 PE=2 S...	[more]
Q3SZZ0	2.8e-42	41.11	Ribosome biogenesis protein BRX1 homolog OS=Bos taurus OX=9913 GN=BRIX1 PE=2 SV=...	[more]
Q8TDN6	2.8e-42	41.11	Ribosome biogenesis protein BRX1 homolog OS=Homo sapiens OX=9606 GN=BRIX1 PE=1 S...	[more]

BLAST of CSPI01G26790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQS3	2.6e-139	81.96	ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE...	[more]
A0A5D3CG95	2.6e-139	81.96	Ribosome biogenesis protein BRX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1E0T2	1.6e-136	80.76	ribosome biogenesis protein BRX1 homolog 1-like OS=Momordica charantia OX=3673 G...	[more]
A0A6J1EW75	2.3e-135	79.75	ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HZ18	1.1e-134	80.25	ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CSPI01G26790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659901.2	8.5e-145	84.54	ribosome biogenesis protein BRX1 homolog 1 [Cucumis sativus] >XP_031743378.1 rib...	[more]
XP_008450669.1	5.3e-139	81.96	PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450670.1 ...	[more]
XP_038879963.1	2.5e-136	80.38	ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida] >XP_03887996...	[more]
XP_038894805.1	3.2e-136	80.38	ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida]	[more]
XP_022159792.1	3.2e-136	80.76	ribosome biogenesis protein BRX1 homolog 1-like [Momordica charantia]	[more]

BLAST of CSPI01G26790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15460.1	1.3e-119	68.77	Ribosomal RNA processing Brix domain protein	[more]
AT1G52930.1	2.0e-115	66.98	Ribosomal RNA processing Brix domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 58..206 e-value: 7.5E-21 score: 85.3
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 63..168 e-value: 1.1E-13 score: 51.7
IPR007109	Brix domain	PROSITE	PS50833	BRIX	coord: 55..212 score: 16.412554
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..271
None	No IPR available	PANTHER	PTHR13634:SF3	RIBOSOME BIOGENESIS PROTEIN BRX1 HOMOLOG 2	coord: 172..270
None	No IPR available	PANTHER	PTHR13634:SF3	RIBOSOME BIOGENESIS PROTEIN BRX1 HOMOLOG 2	coord: 1..172
None	No IPR available	SUPERFAMILY	52954	Class II aaRS ABD-related	coord: 56..209
IPR026532	Ribosome biogenesis protein BRX1	PANTHER	PTHR13634	RIBOSOME BIOGENESIS PROTEIN BRIX	coord: 1..172 coord: 172..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G26790.1	CSPI01G26790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0019843	rRNA binding