CSPI01G26740 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACCAACAAATAGGGATTACTTCCAAAAGTAAAAATGAGAAGTCTGCAAATCTTGCATGGTCGAAGAAGCCACCGCAGCGCCATTTCCATCGAATCAAAGAACTATCAACTAGAAGAAGAAGAAGTTGGAGAAGAATTGATCCCCAGAATCAAGAATCGTAGAACAGAATCAACAACAACAACCCAAAATTTAAACTAAAATTCATACAAAAACCGATACCAAAAGAAAATATGCATTCTTTTGGTTATCGAGCCAATGCTTTGGCTACTTTCGCCATCACTATTCTCGTAATTATGTGCGCCATGGCTTCCTTCTCCGATACCTTCAACACTCCCTCTCCCACCGCCAGTGTTAAGGTTTGACCATTCTTTTTATTTTATTTTTTGTTAGATCTATGTCTCGGGCGTTTAGGGTTTTGTTTTTATTTCTGGGAAAAGCCTGAATTTTGTTGTGCATTTTGTTTGTTTTGATATATATTTTTTGTGGGTTTTAGGTATTGAACATCAACTGGTTTCAGAAACAGCTTCATGGAAATGACGAGGTATGTTGTTGGAGACTCGTCTTAATTGAATGCTGTAGATTGTTTTTGTTTCTTGTATCTGATTGTATTCGGATTTTCTTTGCTCGAGGTGTGTTTTGGGGTTTGATTCTTGTGAATCTAGGGAATCTAATTGAGAATGACATCCAAGTTTGATTTCTTGCGAACTTAGTTAGCTATCTTAGGCCTTCTTCTGGAGCCCTTTTCTTAATCTGTAGTTAATGGTATAGGTTTGTCATTTCGATCTTTCTGTGATCGGATCGTCATTTCCTTTTGATCCAAGAAGATAGAAAGAGATATTGACAAAAATGATATCTTTATAGGTTCGGTCGTCCCCCTTCTCCAAAATGATCATGGAATTTTTAACGAGGTTTCTATTATTCATCTTCAAATTTGCTTGAAGTTTCGACAAGTTTCAAATTGTTCTTTCCTCATTCTCTGTTATTTCCTTTGTTCTTCAAAATTGTGAAAAGGGTGCAATACTCGTCAATGGGAGCACTCGTTTAAAACATAACTCAGAAAACACTCTGTAGAGGATACATCGAAAGGGTTCACTAGGCAACTCATATTATTGACTAGAGGCTGCCATGATCATGGTTGTAGTGCAATGTGGTTCTTGGGATTGCTAGAAGTGCATCGCTTAATTCTATAGCCTGAGCTAAGAAAGGGATTTCAAGTTGGTATCATGTATCGGATATTTGTTGTTCGATACTTCCCAACTCATGCTATAATAGTCATATTGATAAGTTCTCGGTTGGTTTTTAGATGCTCATTGCATTACTGACGAGAATCTTCTTTCATCACAATGGTGTTGATATCTATTATAGCCTTATACTTTACAGTCTGAATGGAAAACCATTAACTGTGCAGGTCAGCATGACATTAAATATCTCGGCAGACTTGCAGTCACTATTTACATGGAACACAAAGCAGGTACGGCAATAACCTATTTTATAACTGCCCTTTTTTTCGTTGTGATTTTTGTGGCATTTCAATGGTTTTTGAGATATTTGAATACTGGAGCTTGAGTAATTGTATCGAGGATCCAACTTGAAATCCATGGCTTTGGCTCCTTTTTTTTTTTATTTTTTTCGAATGTGGACACAAACAGCAGTCAGCAAATCATGATGTAATCTGTCTTGTGTTTTGTTTAATATACTATACTACATATTTCAACTGCAGTTTTCTCATCTTGCTTCCGGTTTCAATTGTTTGTTTTCGTAATATAACTAGCTGACTGAAATGAAATCGATTATTAGATTTTAACACAAGTTTACAGGTTTTTGTTTTTGTAGCTGCTGAGTATGAGACTCCTAAGAATTCCTTGAACCAGGTAAGCTCCATCTATACGTCTTCTAGATTTCTAATCCTACTGCTTATCTTATTCAGTTGCTGTGACATTGTCATTCAGATCTCACTGTGGGATGGTATAATACCTTCCAAAGAAAACGCCAAGTTTTCAATTCACACTTCAAATAAATACCGTTTCATCGATCAGGTGAGCTAGCTACATTCCATGATTCTTCCTATAATTTGATATAAGTCTACCTTTTGCATCTACATGAACTTTATCTCATTATATCCTGTTTTCACTATATAGGGAAGCAATCTCAAAGGTAAAGAATTCAACTTGACATTGCACTGGCATGTAATGCCAAAGACCGGTAAAATGTTCACCAATAAGATAGTGATGACTGGATATCGCTTACCGGAGGACTATCGATGAAGATGCAGTGAAAATATGGTATTTAAAAACTTACTTTTCCATATATGAGGATACAGAAAATTCAGTTCAGCTGAGCTAGAAATTTACGGACAGGAGAAAAGAATTGGCTGTATGAGACTGATAGAAAGTGAGTTTTGGTTGGAGTTTTTGATTCATTCTTCTTTCATTTACAATTGCCCCTTCCCCATTAACTTTGGCCTACCCCTTGAGTTGTTTATTAACGCATCTGAAATCCAGTAGAGCTGATATAACATGACTTTCACTGTTATAATGGTAAAAAAGCATATGTTTTTTTCCATTTTCTTACCAC AACCAACAAATAGGGATTACTTCCAAAAGTAAAAATGAGAAGTCTGCAAATCTTGCATGGTCGAAGAAGCCACCGCAGCGCCATTTCCATCGAATCAAAGAACTATCAACTAGAAGAAGAAGAAGTTGGAGAAGAATTGATCCCCAGAATCAAGAATCGTAGAACAGAATCAACAACAACAACCCAAAATTTAAACTAAAATTCATACAAAAACCGATACCAAAAGAAAATATGCATTCTTTTGGTTATCGAGCCAATGCTTTGGCTACTTTCGCCATCACTATTCTCGTAATTATGTGCGCCATGGCTTCCTTCTCCGATACCTTCAACACTCCCTCTCCCACCGCCAGTGTTAAGGTATTGAACATCAACTGGTTTCAGAAACAGCTTCATGGAAATGACGAGGTCAGCATGACATTAAATATCTCGGCAGACTTGCAGTCACTATTTACATGGAACACAAAGCAGGTTTTTGTTTTTGTAGCTGCTGAGTATGAGACTCCTAAGAATTCCTTGAACCAGATCTCACTGTGGGATGGTATAATACCTTCCAAAGAAAACGCCAAGTTTTCAATTCACACTTCAAATAAATACCGTTTCATCGATCAGGGAAGCAATCTCAAAGGTAAAGAATTCAACTTGACATTGCACTGGCATGTAATGCCAAAGACCGGTAAAATGTTCACCAATAAGATAGTGATGACTGGATATCGCTTACCGGAGGACTATCGATGAAGATGCAGTGAAAATATGGTATTTAAAAACTTACTTTTCCATATATGAGGATACAGAAAATTCAGTTCAGCTGAGCTAGAAATTTACGGACAGGAGAAAAGAATTGGCTGTATGAGACTGATAGAAAGTGAGTTTTGGTTGGAGTTTTTGATTCATTCTTCTTTCATTTACAATTGCCCCTTCCCCATTAACTTTGGCCTACCCCTTGAGTTGTTTATTAACGCATCTGAAATCCAGTAGAGCTGATATAACATGACTTTCACTGTTATAATGGTAAAAAAGCATATGTTTTTTTCCATTTTCTTACCAC ATGCATTCTTTTGGTTATCGAGCCAATGCTTTGGCTACTTTCGCCATCACTATTCTCGTAATTATGTGCGCCATGGCTTCCTTCTCCGATACCTTCAACACTCCCTCTCCCACCGCCAGTGTTAAGGTATTGAACATCAACTGGTTTCAGAAACAGCTTCATGGAAATGACGAGGTCAGCATGACATTAAATATCTCGGCAGACTTGCAGTCACTATTTACATGGAACACAAAGCAGGTTTTTGTTTTTGTAGCTGCTGAGTATGAGACTCCTAAGAATTCCTTGAACCAGATCTCACTGTGGGATGGTATAATACCTTCCAAAGAAAACGCCAAGTTTTCAATTCACACTTCAAATAAATACCGTTTCATCGATCAGGGAAGCAATCTCAAAGGTAAAGAATTCAACTTGACATTGCACTGGCATGTAATGCCAAAGACCGGTAAAATGTTCACCAATAAGATAGTGATGACTGGATATCGCTTACCGGAGGACTATCGATGA MHSFGYRANALATFAITILVIMCAMASFSDTFNTPSPTASVKVLNINWFQKQLHGNDEVSMTLNISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSNKYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFTNKIVMTGYRLPEDYR* Homology
BLAST of CSPI01G26740 vs. ExPASy Swiss-Prot
Match: Q53YF3 (Signal peptidase complex subunit 3B OS=Arabidopsis thaliana OX=3702 GN=At5g27430 PE=2 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.3e-74 Identity = 130/167 (77.84%), Postives = 148/167 (88.62%), Query Frame = 0
BLAST of CSPI01G26740 vs. ExPASy Swiss-Prot
Match: Q9MA96 (Signal peptidase complex subunit 3A OS=Arabidopsis thaliana OX=3702 GN=At3g05230 PE=2 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.2e-72 Identity = 127/167 (76.05%), Postives = 148/167 (88.62%), Query Frame = 0
BLAST of CSPI01G26740 vs. ExPASy Swiss-Prot
Match: Q9LGB4 (Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0131800 PE=3 SV=2) HSP 1 Score: 141.4 bits (355), Expect = 9.6e-33 Identity = 73/166 (43.98%), Postives = 94/166 (56.63%), Query Frame = 0
BLAST of CSPI01G26740 vs. ExPASy Swiss-Prot
Match: B0G180 (Signal peptidase complex subunit 3 OS=Dictyostelium discoideum OX=44689 GN=spcs3 PE=3 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.2e-19 Identity = 54/167 (32.34%), Postives = 91/167 (54.49%), Query Frame = 0
BLAST of CSPI01G26740 vs. ExPASy Swiss-Prot
Match: P28687 (Signal peptidase complex subunit 3 OS=Gallus gallus OX=9031 GN=SPC22 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.6e-19 Identity = 55/149 (36.91%), Postives = 84/149 (56.38%), Query Frame = 0
BLAST of CSPI01G26740 vs. ExPASy TrEMBL
Match: A0A5D3CE33 (Signal peptidase complex subunit 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003740 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 7.5e-89 Identity = 162/167 (97.01%), Postives = 165/167 (98.80%), Query Frame = 0
BLAST of CSPI01G26740 vs. ExPASy TrEMBL
Match: A0A1S3BQR8 (Signal peptidase complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103492185 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 7.5e-89 Identity = 162/167 (97.01%), Postives = 165/167 (98.80%), Query Frame = 0
BLAST of CSPI01G26740 vs. ExPASy TrEMBL
Match: A0A6J1BP73 (Signal peptidase complex subunit 3 OS=Momordica charantia OX=3673 GN=LOC111004516 PE=3 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 3.1e-82 Identity = 147/167 (88.02%), Postives = 159/167 (95.21%), Query Frame = 0
BLAST of CSPI01G26740 vs. ExPASy TrEMBL
Match: A0A6J1HY85 (Signal peptidase complex subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111467933 PE=3 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 5.8e-81 Identity = 149/167 (89.22%), Postives = 157/167 (94.01%), Query Frame = 0
BLAST of CSPI01G26740 vs. ExPASy TrEMBL
Match: A0A6J1DBR1 (Signal peptidase complex subunit 3 OS=Momordica charantia OX=3673 GN=LOC111018858 PE=3 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 5.8e-81 Identity = 145/167 (86.83%), Postives = 157/167 (94.01%), Query Frame = 0
BLAST of CSPI01G26740 vs. NCBI nr
Match: XP_004135628.1 (signal peptidase complex subunit 3B [Cucumis sativus] >KAE8653375.1 hypothetical protein Csa_007160 [Cucumis sativus]) HSP 1 Score: 344.0 bits (881), Expect = 7.4e-91 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of CSPI01G26740 vs. NCBI nr
Match: XP_008450666.1 (PREDICTED: signal peptidase complex subunit 3B-like [Cucumis melo] >TYK10227.1 signal peptidase complex subunit 3B-like [Cucumis melo var. makuwa]) HSP 1 Score: 336.3 bits (861), Expect = 1.6e-88 Identity = 162/167 (97.01%), Postives = 165/167 (98.80%), Query Frame = 0
BLAST of CSPI01G26740 vs. NCBI nr
Match: XP_038878575.1 (signal peptidase complex subunit 3B-like [Benincasa hispida]) HSP 1 Score: 326.6 bits (836), Expect = 1.2e-85 Identity = 155/167 (92.81%), Postives = 163/167 (97.60%), Query Frame = 0
BLAST of CSPI01G26740 vs. NCBI nr
Match: XP_022131260.1 (signal peptidase complex subunit 3B-like [Momordica charantia]) HSP 1 Score: 314.3 bits (804), Expect = 6.3e-82 Identity = 147/167 (88.02%), Postives = 159/167 (95.21%), Query Frame = 0
BLAST of CSPI01G26740 vs. NCBI nr
Match: XP_022150797.1 (signal peptidase complex subunit 3B-like [Momordica charantia]) HSP 1 Score: 310.1 bits (793), Expect = 1.2e-80 Identity = 145/167 (86.83%), Postives = 157/167 (94.01%), Query Frame = 0
BLAST of CSPI01G26740 vs. TAIR 10
Match: AT5G27430.1 (Signal peptidase subunit ) HSP 1 Score: 280.4 bits (716), Expect = 9.4e-76 Identity = 130/167 (77.84%), Postives = 148/167 (88.62%), Query Frame = 0
BLAST of CSPI01G26740 vs. TAIR 10
Match: AT3G05230.1 (Signal peptidase subunit ) HSP 1 Score: 273.9 bits (699), Expect = 8.8e-74 Identity = 127/167 (76.05%), Postives = 148/167 (88.62%), Query Frame = 0
BLAST of CSPI01G26740 vs. TAIR 10
Match: AT3G05230.2 (Signal peptidase subunit ) HSP 1 Score: 203.0 bits (515), Expect = 1.9e-52 Identity = 96/126 (76.19%), Postives = 112/126 (88.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|