CSPI01G26440 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G26440
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	60S ribosomal protein L22-2
Location	Chr1: 21634803 .. 21636477 (+)
RNA-Seq Expression	CSPI01G26440
Synteny	CSPI01G26440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGGCGGCCGTCGATATCTGAATCCTCAACTTCTCTTCACTAACTTGTATTCTCTCTTCCTCTCTCGTATAATTCTTTCCTCGATCCCATTCTTGTTTATGTTCTTTAATTCATTGGTTTTTCTTTCTGTTTCTGTAGAGTTTTCTTTAATCGAAAATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCTAAGCCAGTGGAAGATAAGATTATGGACATTGCTTCGTTGGAGAAGTTTCTTCTCGAGAGGATTAAAGTTGGAGGCAAGGCTGGAGCTCTTGGGGATTCCGTCTCTGTTACTCGCGAGAAGAGTAAAATTACCGTCACTTCTGACAGCAACTTCTCAAAGAGGTATACTTTTCCCCTCTTTTGAATCTGTAGTTTGTTCTGAATCGATGGAAGTTCTATTTCGAATGTGGGTATTCTACATGATGAAGTTTTGTATGAAAATGAGTCACTAGGTTGAGGATTTGTTACTTGTTAGCGTTTTGAATGTTTACACAAGACGAGTTATTGTGTGATAAATCAATATGGCGTGTTTGGACTTTGTCCTAGGGTGTTTTAGATTTGTTATGGTAAGGGGAAAATTAGGCTTCTTATGTTTGAAACATGATTCCATTTTTCGAACGAGGGTTGGCATTATGGCTGAGTAATTGATTCTAGAATTAGATTTGTGGGTAAACAATTTGAGAGCTCCGATTATGAAACTTGTGGCCAGTTTTCTATTATTATATTTTTCGGACAGAATAGGCTATTCAAACTAGAAAGTTACTTGGTAGTTTCCTTCCATTATCGTACCAGAAACACAGTTTGCTTTGTCTATTTAAAGTGCTCATTTCATAGGTTTGTTTGTGAATAGGAAGAAATAGATTACTGTGCGAGTAATTTTTTTTTTGTTATGAGCCAATTATCCAGCTGTTATTATATTTTCCTTCAAGATGATAAGTCTGATTTGTAGTTTACTAATCACACACACAATCTGTTTTACTCAATTGTTTGGCCGTAGAAGTTTAGTATCTGAATCGTATTAGTTTCTCCATGTTCTCTTCTAGCATTTAGAATTATTCATTAGTTGTTTTAACTTTCCAATCCTCTTTTGCCCCCAAGGAGTCCTTTTGCTACAAAAACTATTCCATGACTTGTTAACTCCTTACACTGTGGGGACCCAAAATAGACAAGTTTAACAACCTTGTTTTCTTCTAAACTTGTGTTTTTCTGGTTAGGTATTTGAAGTACTTGACTAAGAAGTACCTGAAGAAACACAATGTGCGAGATTGGCTACGAGTGATTGCTGCCAACAAAGATAGGAATGTGTACGAACTCAGGTACTTTAACATTGCCGAAAATGAGGGAGAGGAAGAGGATTAAATTTACCAATTTAGACATTGTATTCAAGGAACAAGTGCGTCTATACGTCGCTGGAATCTCTCACTGTTTTTGTTACTAGTGTTGCCTGTGTGATGCTCTCTATTTTTATTTGAACTAATGCAGTTTAGCAATTTTGTTTTCTTCGACAGACCTAGATTGCTGGTATTTTTTGTGTCATATTTGAGTAAGATCAACAATTTTTCACTTTAAATTACCCATGCTTTTCACATGTCTCATGAAATCTAGGTGGATGAATTATATTTATTTGAC

mRNA sequence

ATTGGGCGGCCGTCGATATCTGAATCCTCAACTTCTCTTCACTAACTTAGTTTTCTTTAATCGAAAATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCTAAGCCAGTGGAAGATAAGATTATGGACATTGCTTCGTTGGAGAAGTTTCTTCTCGAGAGGATTAAAGTTGGAGGCAAGGCTGGAGCTCTTGGGGATTCCGTCTCTGTTACTCGCGAGAAGAGTAAAATTACCGTCACTTCTGACAGCAACTTCTCAAAGAGGTATTTGAAGTACTTGACTAAGAAGTACCTGAAGAAACACAATGTGCGAGATTGGCTACGAGTGATTGCTGCCAACAAAGATAGGAATGTGTACGAACTCAGGTACTTTAACATTGCCGAAAATGAGGGAGAGGAAGAGGATTAAATTTACCAATTTAGACATTGTATTCAAGGAACAAGTGCGTCTATACGTCGCTGGAATCTCTCACTGTTTTTGTTACTAGTGTTGCCTGTGTGATGCTCTCTATTTTTATTTGAACTAATGCAGTTTAGCAATTTTGTTTTCTTCGACAGACCTAGATTGCTGGTATTTTTTGTGTCATATTTGAGTAAGATCAACAATTTTTCACTTTAAATTACCCATGCTTTTCACATGTCTCATGAAATCTAGGTGGATGAATTATATTTATTTGAC

Coding sequence (CDS)

ATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCTAAGCCAGTGGAAGATAAGATTATGGACATTGCTTCGTTGGAGAAGTTTCTTCTCGAGAGGATTAAAGTTGGAGGCAAGGCTGGAGCTCTTGGGGATTCCGTCTCTGTTACTCGCGAGAAGAGTAAAATTACCGTCACTTCTGACAGCAACTTCTCAAAGAGGTATTTGAAGTACTTGACTAAGAAGTACCTGAAGAAACACAATGTGCGAGATTGGCTACGAGTGATTGCTGCCAACAAAGATAGGAATGTGTACGAACTCAGGTACTTTAACATTGCCGAAAATGAGGGAGAGGAAGAGGATTAA

Protein sequence

MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED*

Homology

[Close]

BLAST of CSPI01G26440 vs. ExPASy Swiss-Prot
Match: Q9M9W1 (60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 5.4e-57
Identity = 112/124 (90.32%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CSPI01G26440 vs. ExPASy Swiss-Prot
Match: Q9FE58 (60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 2.7e-56
Identity = 111/124 (89.52%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRG AA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVS+T
Sbjct: 1   MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENE 
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEA 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CSPI01G26440 vs. ExPASy Swiss-Prot
Match: Q9SRX7 (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.5e-40
Identity = 86/126 (68.25%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 1   MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVS 60
           M+R GA  +G   KKKGV+F IDCSKPV+D I++IA+LEKFL ERIKV GKAGALG+SVS
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 61  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAEN 120
           +TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRVIA+NKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 121 EGEEED 125
               E+
Sbjct: 121 VASYEE 126

[Close]

BLAST of CSPI01G26440 vs. ExPASy Swiss-Prot
Match: Q90YU6 (60S ribosomal protein L22 OS=Ictalurus punctatus OX=7998 GN=rpl22 PE=2 SV=3)

HSP 1 Score: 143.3 bits (360), Expect = 1.9e-33
Identity = 79/125 (63.20%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VSV 60
           + +    G K KK+ + FT+DC+ PVED IMD A+ E+FL ERIKV GKAG LG   VS+
Sbjct: 4   LKKPAVKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSI 63

Query: 61  TREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENE 120
            R KSKITVTSD  FSKRYLKYLTKKYLKK+N+RDWLRV+A  K+   YELRYF I ++E
Sbjct: 64  ERSKSKITVTSDIPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKES--YELRYFQINQDE 123

Query: 121 GEEED 125
            EEED
Sbjct: 124 EEEED 126

[Close]

BLAST of CSPI01G26440 vs. ExPASy Swiss-Prot
Match: P47198 (60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 2.5e-33
Identity = 78/120 (65.00%), Postives = 94/120 (78.33%), Query Frame = 0


Query: 6   AAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VSVTREKS 65
           A G K KK+ + FT+DC+ PVED IMD A+ E+FL ERIKV GKAG LG   V++ R KS
Sbjct: 9   AKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKS 68

Query: 66  KITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 125
           KITVTS+  FSKRYLKYLTKKYLKK+N+RDWLRV+A +K+   YELRYF I ++E EEED
Sbjct: 69  KITVTSEEPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126

[Close]

BLAST of CSPI01G26440 vs. ExPASy TrEMBL
Match: A0A5A7U6J1 (60S ribosomal protein L22-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004030 PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.1e-60
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CSPI01G26440 vs. ExPASy TrEMBL
Match: A0A1S3BQA5 (60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492158 PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.1e-60
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CSPI01G26440 vs. ExPASy TrEMBL
Match: A0A6J1I4P7 (60S ribosomal protein L22-2 OS=Cucurbita maxima OX=3661 GN=LOC111469134 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.4e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CSPI01G26440 vs. ExPASy TrEMBL
Match: A0A6J1CY92 (60S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111015359 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.4e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CSPI01G26440 vs. ExPASy TrEMBL
Match: A0A6J1F0W8 (60S ribosomal protein L22-2 OS=Cucurbita moschata OX=3662 GN=LOC111441145 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.4e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CSPI01G26440 vs. NCBI nr
Match: XP_004135607.1 (60S ribosomal protein L22-2 [Cucumis sativus] >XP_008450627.1 PREDICTED: 60S ribosomal protein L22-2 [Cucumis melo] >KAA0050904.1 60S ribosomal protein L22-2 [Cucumis melo var. makuwa] >KAE8653365.1 hypothetical protein Csa_007558 [Cucumis sativus] >TYK10255.1 60S ribosomal protein L22-2 [Cucumis melo var. makuwa])

HSP 1 Score: 242.3 bits (617), Expect = 2.3e-60
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CSPI01G26440 vs. NCBI nr
Match: XP_022146066.1 (60S ribosomal protein L22-2 [Momordica charantia] >XP_022933854.1 60S ribosomal protein L22-2 [Cucurbita moschata] >XP_022970154.1 60S ribosomal protein L22-2 [Cucurbita maxima] >XP_023530293.1 60S ribosomal protein L22-2 [Cucurbita pepo subsp. pepo] >XP_038880642.1 60S ribosomal protein L22-2 [Benincasa hispida])

HSP 1 Score: 241.1 bits (614), Expect = 5.1e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CSPI01G26440 vs. NCBI nr
Match: KAG6588488.1 (60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241.1 bits (614), Expect = 5.1e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVT
Sbjct: 55  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 114

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 115 REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 174

Query: 121 EEED 125
           EEED
Sbjct: 175 EEED 178

[Close]

BLAST of CSPI01G26440 vs. NCBI nr
Match: KAG6590443.1 (60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240.0 bits (611), Expect = 1.1e-59
Identity = 122/124 (98.39%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVT
Sbjct: 37  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 96

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 97  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 156

Query: 121 EEED 125
           EEED
Sbjct: 157 EEED 160

[Close]

BLAST of CSPI01G26440 vs. NCBI nr
Match: XP_022961443.1 (60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_022968816.1 60S ribosomal protein L22-2-like [Cucurbita maxima] >XP_023515962.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.0 bits (611), Expect = 1.1e-59
Identity = 122/124 (98.39%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CSPI01G26440 vs. TAIR 10
Match: AT3G05560.1 (Ribosomal L22e protein family )

HSP 1 Score: 221.5 bits (563), Expect = 3.9e-58
Identity = 112/124 (90.32%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CSPI01G26440 vs. TAIR 10
Match: AT3G05560.2 (Ribosomal L22e protein family )

HSP 1 Score: 221.5 bits (563), Expect = 3.9e-58
Identity = 112/124 (90.32%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CSPI01G26440 vs. TAIR 10
Match: AT3G05560.3 (Ribosomal L22e protein family )

HSP 1 Score: 221.5 bits (563), Expect = 3.9e-58
Identity = 112/124 (90.32%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CSPI01G26440 vs. TAIR 10
Match: AT5G27770.1 (Ribosomal L22e protein family )

HSP 1 Score: 219.2 bits (557), Expect = 1.9e-57
Identity = 111/124 (89.52%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60
           MSRG AA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVS+T
Sbjct: 1   MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENE 
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEA 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CSPI01G26440 vs. TAIR 10
Match: AT1G02830.1 (Ribosomal L22e protein family )

HSP 1 Score: 165.6 bits (418), Expect = 2.5e-41
Identity = 86/126 (68.25%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 1   MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVS 60
           M+R GA  +G   KKKGV+F IDCSKPV+D I++IA+LEKFL ERIKV GKAGALG+SVS
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 61  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAEN 120
           +TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRVIA+NKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 121 EGEEED 125
               E+
Sbjct: 121 VASYEE 126

The following BLAST results are available for this feature:

BLAST of CSPI01G26440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9W1	5.4e-57	90.32	60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1	[more]
Q9FE58	2.7e-56	89.52	60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1	[more]
Q9SRX7	3.5e-40	68.25	Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A P...	[more]
Q90YU6	1.9e-33	63.20	60S ribosomal protein L22 OS=Ictalurus punctatus OX=7998 GN=rpl22 PE=2 SV=3	[more]
P47198	2.5e-33	65.00	60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2	[more]

BLAST of CSPI01G26440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U6J1	1.1e-60	100.00	60S ribosomal protein L22-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BQA5	1.1e-60	100.00	60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492158 PE=3 SV=1	[more]
A0A6J1I4P7	2.4e-60	99.19	60S ribosomal protein L22-2 OS=Cucurbita maxima OX=3661 GN=LOC111469134 PE=3 SV=...	[more]
A0A6J1CY92	2.4e-60	99.19	60S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111015359 PE=3 ...	[more]
A0A6J1F0W8	2.4e-60	99.19	60S ribosomal protein L22-2 OS=Cucurbita moschata OX=3662 GN=LOC111441145 PE=3 S...	[more]

BLAST of CSPI01G26440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135607.1	2.3e-60	100.00	60S ribosomal protein L22-2 [Cucumis sativus] >XP_008450627.1 PREDICTED: 60S rib...	[more]
XP_022146066.1	5.1e-60	99.19	60S ribosomal protein L22-2 [Momordica charantia] >XP_022933854.1 60S ribosomal ...	[more]
KAG6588488.1	5.1e-60	99.19	60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6590443.1	1.1e-59	98.39	60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022961443.1	1.1e-59	98.39	60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_022968816.1 60S riboso...	[more]

BLAST of CSPI01G26440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05560.1	3.9e-58	90.32	Ribosomal L22e protein family	[more]
AT3G05560.2	3.9e-58	90.32	Ribosomal L22e protein family	[more]
AT3G05560.3	3.9e-58	90.32	Ribosomal L22e protein family	[more]
AT5G27770.1	1.9e-57	89.52	Ribosomal L22e protein family	[more]
AT1G02830.1	2.5e-41	68.25	Ribosomal L22e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038526	Ribosomal protein L22e superfamily	GENE3D	3.30.1360.210		coord: 6..83 e-value: 1.4E-32 score: 114.2
IPR002671	Ribosomal protein L22e	PFAM	PF01776	Ribosomal_L22e	coord: 14..82 e-value: 7.3E-26 score: 90.7
IPR002671	Ribosomal protein L22e	PANTHER	PTHR10064	60S RIBOSOMAL PROTEIN L22	coord: 1..80
None	No IPR available	PANTHER	PTHR10064:SF11	RIBOSOMAL L22E FAMILY PROTEIN	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G26440.1	CSPI01G26440.1	mRNA
CSPI01G26440.2	CSPI01G26440.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome