CSPI01G25760 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G25760
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 21168856 .. 21169188 (+)
RNA-Seq ExpressionCSPI01G25760
SyntenyCSPI01G25760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCAGGAGTGTTTGGAGGTACCTTTTGGCCACATGGTCAAGCTCTAAAATGTTGAATATGACCATCGTCATCTCATTTAATCTTATACACTCACTTAGTGCCAACAACATGGTGAAAAGAGCGAAAGGGAGCTAAATTTCTTGTACGATTGTAGCAAATTCAACATCTATAACCGACTCCCAAACAAGGAGAGTGTGAACATGTTGCAGTTGAGACCAACTAGTTGCCGGAATAAGTTGAGTTCACCCCCAAAAAAACTGCAAGGTTTGGAATTCTTGGCTAACATTGATGGTCATGGGGAGTGTGTTCAGGCTAGGACGACAAAAGAG

mRNA sequence

ATGTTTCAGGAGTGTTTGGAGTGCCAACAACATGGTGAAAAGAGCGAAAGGGAGCTAAATTTCTTGTACGATTGTAGCAAATTCAACATCTATAACCGACTCCCAAACAAGGAGAGTGTGAACATGTTGCAGTTGAGACCAACTAGTTGCCGGAATAAGTTGAGTTCACCCCCAAAAAAACTGCAAGGTTTGGAATTCTTGGCTAACATTGATGGTCATGGGGAGTGTGTTCAGGCTAGGACGACAAAAGAG

Coding sequence (CDS)

ATGTTTCAGGAGTGTTTGGAGTGCCAACAACATGGTGAAAAGAGCGAAAGGGAGCTAAATTTCTTGTACGATTGTAGCAAATTCAACATCTATAACCGACTCCCAAACAAGGAGAGTGTGAACATGTTGCAGTTGAGACCAACTAGTTGCCGGAATAAGTTGAGTTCACCCCCAAAAAAACTGCAAGGTTTGGAATTCTTGGCTAACATTGATGGTCATGGGGAGTGTGTTCAGGCTAGGACGACAAAAGAG

Protein sequence

MFQECLECQQHGEKSERELNFLYDCSKFNIYNRLPNKESVNMLQLRPTSCRNKLSSPPKKLQGLEFLANIDGHGECVQARTTKE
Homology
[Close]
BLAST of CSPI01G25760 vs. ExPASy TrEMBL
Match: A0A0A0LVW4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560820 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.6e-15
Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0 

Query: 42 MLQLRPTSCRNKLSSPPKKLQGLEFLANIDGHGECVQARTTKE 85
          MLQLRPTSCRNKLSSPPKKLQGLEFLANIDGHGECVQARTTK+
Sbjct: 1  MLQLRPTSCRNKLSSPPKKLQGLEFLANIDGHGECVQARTTKD 43

[Close]
BLAST of CSPI01G25760 vs. NCBI nr
Match: KGN66000.1 (hypothetical protein Csa_007484 [Cucumis sativus])

HSP 1 Score: 91.7 bits (226), Expect = 3.3e-15
Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0 

Query: 42 MLQLRPTSCRNKLSSPPKKLQGLEFLANIDGHGECVQARTTKE 85
          MLQLRPTSCRNKLSSPPKKLQGLEFLANIDGHGECVQARTTK+
Sbjct: 1  MLQLRPTSCRNKLSSPPKKLQGLEFLANIDGHGECVQARTTKD 43

The following BLAST results are available for this feature:
BLAST of CSPI01G25760 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G25760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVW41.6e-1597.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560820 PE=4 SV=1[more]
BLAST of CSPI01G25760 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66000.13.3e-1597.67hypothetical protein Csa_007484 [Cucumis sativus][more]
BLAST of CSPI01G25760 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G25760.1CSPI01G25760.1mRNA