CSPI01G24900 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G24900
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Eukaryotic translation initiation factor 3 subunit A
Location	Chr1: 20329333 .. 20338365 (+)
RNA-Seq Expression	CSPI01G24900
Synteny	CSPI01G24900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTACTCCTCCGGCAGCTGAGTGTTGCCGCTCCTTTGCTCCAGTTCACGGCTGCTGCTGCAGCCATCGTCTTTCCTCCCTTCGCGCCGCCGAAGCTTCAGTCACAGTGGTTTTGCTCTGATTTTCTACTCCTTTTCTGTTACTGGTAGGTATTCTCCCAGCTTCCATCTATGGCTTTCTTCTCGCTTGGAAAACACGAATTTCAATTTACCTAATGATATAATGGAGGATTTGTTTGATTAAGGAACTATTTAATTCATAGTTTCATTGATTAACCGAACAACTTCAACCTGACTGATGTCAATTGGTTTAATCACTTCAATTTTCTAAACTAGCTTGCTACAAAAAGATAAACAAACAACAATGGAGTGTGTCCATAAAGAACGTGTGAAGAAAACGGGAAAACAAAAGTAGAGCGAAAAGAAAATAAAAATTTTGCAATGCCCATTCTGATCTTTACATTTTCCATGACATTGCTCTTTCACTCATTATTTCTAGCTCTACCTTCTTATATCCCCTGCAATGAATTAGAGAAGAAATGTCCGCATACTGTAGATATAGGGAGGAAGGCCTAAAGAATAGCTCAGATTCGTAATGGCCCTTTCGTGATTCAAATCACTCACTCACCCTAAGAATTGAGTAAACCACAATTAATTCACAATTTTACTTTTACTTTTAAACAATGGACAGAAGTATAAAATTTGTCTTCTTTAACACCATTTTGTAGAATGATAAAAAATTGAAGAACTTAGAAAAGAACAATGTAAGTAAATGAAGTAAAAAAAATATGGCAGAATATGGTGAATTTCTCTCCTATAGCCACTTCTATATAAATATCTATATATATTTGTGTATATTGCATAGATATAGATAGTCAGGAAAAGGCCATTAATGAGAGTATAGAAAAAATACCATTAAAAATTCCTTAAGAAAAGGTATAATTATCAATAAACTAAGGTGTAAAAAAGGTTTTTAGTTATATTTGGAATTCAAAAAAAATCTGTGCCCTTTGATTAGTTATCCTTAGAAAAGCGGCAGAGCCTTCTACTTATAGGCCAACTCCTGATTTCTAAAGCAATAAATGATGCAACTTGGCTGCAAAATCTCTAATTCTCACGAATTTTCTTTGTTTGGTTTAAATCTTTATAATGGTTTTTCGTGGTTGTCATAGGTCATTCGGCTTTGGGTGAGCTAAACATTGGATTGAGATATGGCATCTTTTGTAAAGCCAGAGAATGCTCTAAAACGAGCCGAAGGTAATGAACATAATGTTATCTTTTGGATTTGCCATAAATTGAGTTCTATTTGGGAGTATGCCATGATTTTTTGGGTACTTTGTTTTAGTTGTATGTTAGGTTCTTTTGATGAATTCATGTACTGTAAGTTCTCATAATTCAATGAACGTTTTCAATTTATTGTTTGTTTGGAAGTTGGTTCAATATACATGTTTTGATGAACATTGAGAATATATACATTATTGGTGTGTTGATGTCTGTAGATTTAGTGATTTGACTCTTCGAAGTTTTCCTTGAAGTGTTCACCTCATGGTAGTTTTCATTTTACTTTAAATGAAATTTAGGTGGTAAGGGTTTTTTTTTGGGTGGCTCGTGACGTGTTAATTTTATAGTTGGATAGCATATTCATGTCTTGAATTTTACGTTATCACGTCTTATTTTATTATTGAAAACATATAATTTGGTTCTTTTATCCTTTGTAAAGGCTTCTGAACTCTATTTATTTTCTTATTTCTTCTCATAATATAATGTGTACACCATAATTTATTTATAAGATGTAGTTGGAAGACATATTAGAACATTGGAATACCTTTTTCTAATTCCGGGGGTATTCAGTTTGCCGTTGCTGTGACTTGTGTTTCTTGTAACTGGAGTACCAAGTTTGTGTTTGTGGTTCACACTGTTGATGTATTTACCCTATTTTGAAAATTTATGATGTCTATTGTTTTTTTTTATGTGAAATGAAGAATAGCATTTCTTCAATTTATTCTCCTTGTATGTTTTCAGAGCTGATAAATGTTGGCCAGAAGCAAGATGCCTTGCAAGCCCTTCATGATCTTATCACTTCAAAAAAATATCGAGCATGGCAGAAACCTCTTGAGAGGATTATGTTTAAATATGTTGAGCTCTGTGTGGACATGAGGAAAGGAAGGTTTGCTAAGGATGGTTTGATTCAATATCGTATTGTTTGCCAGCAAGTCAATGTTACTTCCTTGGAGGAAGTAATCAAGCACTTCATGCATCTTTCCACTGAGAAGGCAGAGCAGGCTCGTACTCAAGCTCAAGCCTTAGAAGAAGCTCTGGACGTTGATGATTTGGAAGCTGATAAAAGACCGGAAGATCTGATGCTTAGTTATGTTAGTGGTGAAAAGGGAAAAGATAGATCTGATCGTGAACTTGTTACCCCCTGGTTTAAATTTCTGTGGGAGACCTATAGAACGGTTCTTGATATACTAAGGAATAACTCAAAGTTGGAGGCACTTTATGCGGTAGGTGGTCACCAAGCTTGTTATTTGGTGTATGAGTTATTGAGTTAGTTTTTCAGTTTATATCTTTTAAAATGTGAGAAGTATGTCATGCCTTAAACTTTTAGCATTACTGTGGAACTTAATATTGGGTCTGGGAGTCCTAGTTCAAACCCTGTCATATTGTAACCTAGCTTCCTAATGGTTCTAATGGTTGAAGGATTTATGAAGGCTTTTGATATTGTATCTGGAACTTATGTTTAGGGCTCCTTGGATCAACTTTGCCATAAGAAACCAATTTTTTTGGGGGTTAATTTACAACTTTAGTTCTTAAAAGATTCCTTTTGTATTTTATAAAGGAAATTTATTTGACCCTTAATTCTTTACCTTTTACACATCACAATTTTTGGAAGAGGGTTACAAAAACTATTCTGGACAAGATCAGACTGTTTTCAGTTTGGACATTATTTATTTAGCATTGGTTAGAACTTACACATTGACAAGTCTAGCATTTTTCATTTGTAGATGACCTTGATGTCTTCTGTACATTCACTAGATGAAGCATGTAAATTTTTTGTACTGAGATGTAATAATTCTTGTAGTATTTTTCATTTGTAGATGACAGCTCATCGTGCCTTCCAGTTCTGTAAAGTGTATAAAAGAACAACAGAGTTTCGTAGGTTATGTGAAATTATCAGAAATCATCTTGCTAATCTCAATAAGTATAGAGACCAAAGGGATCGGCCTGATCTTTCTGCCCCAGAGAGTTTGCAATTGTACCTTGACACAAGATTTGAACAGCTGAAGGTTGCCACAGAGCTTGAGCTCTGGCAGGTCTGAACTTTTTCTCTCCATATAAAGTAGTGGGCAATCTCAAGATTTCAGACATTCATATCAAGGTTTCTTTTATACAAATACTGTCAATTCAGAAATCTATTTGTCACTAATTTTTGCAGGAAGCTTTTCGTTCCGTGGAAGATATTCATGGATTGATGTGCATGGTGAAGAAAACACCCAAACCATCTTTGATGGTGGTGTATTACGTCAAATTAACAGAGATTTTCTGGATATCAGATAGCAATCTTTATCATGCTTATGCATGGCTTAAACTTTTCTCCCTTCAGAAGAGTTTCAACAAAAATTTAAGCCAGAAGGATTTGCAGCTGATAGCTTCTTCTGTTCTTTTAGCAGCACTTGCAGTGTCTCCCTACGACTCTAAGCATGGTGCATCTCATTTAGAACTTGAACATGAGAAAGAACGGAATTTGAGGATGGCCAATCTTATAGGGTTCAGTTTAGATTCCAAACTTGAAAGTAGAGATGTGGTAAAACAATTTGGCTAATTGGATTTTCTTTTATATTTTTCACCGCTTGTACATCACCTTACTCTCTCTCTGTTCTTGTTTCATCCAGCTTTCAAGGGAAAATCTTTTTTCTGAACTGGTATGTCTGATTGACTTTACTTGGTTACTTTGTTAAATATTTCCCTCTTACCCTCTGAAAGTATGATACTTGACAGTTGATTCACATTCATTTTAAATATTAAGGTTGGATAGTAAATTTCAATATTGGAAATTAAACGATTAATGGAATTGTTTCTTATCCAGAAAAAAGAACACCATGCTTCATATTGAAAGATTGCAACTATTGTTGATGTATGTTAGTCAATTTTCATTTGGGCATATTTGCAATCATCTCCATCTCACCTTTTTTATTTGAAGAACTATGTTTTTCCATATACCATGGAAATGCCATGCAAATATGTATCTTAACTTTTAGTATTTTACTCAATTTTCATTAGGCCATATTTGCAATCATCCCTATCTCACCTTTTTTATATGAAGAATTGTGTTTTTTCTTTTACTGTTGAAAGGTCATGCCCCGTATAATAACTTTTCATTTACTATGTTTAGCCCACTGTAAACTGAAAAAAAAAAATCATTAGGGCTGATGTGCAATCTTCTATCTCATCTCTTTTACATGTAAAACTGTGTCTTTTTCGTTTACAGTGACAAATCTGTATCACAACTTTTAGTGTGTACTTGATAATTCTAGTTCTATTTTCTTAATACATTTCTGTTTTTCTTTAGGTGTCTAAAGGAGTCCTAAGCTGTGCAACTCAAGAAGTTAAAGATCTTTATCATCTTTTGGAGCACGAATTCTTCCATCTTGACCTTGCAACAAAACTGCAACCCTTGCTAAACAAAGTGTCAAAGCTTGGAGGTAAGCTTTCATCAGCTTCATCTGTCCCTGAAGTCCAATTGTCCCAATATGTTCCTGCTCTTGAAAAACTTGCTACCCTGAGGCTGCTTCAGCAGGTACCTTTTGTCATTATTTATATATTGTTAATCTTGCAAAGCTATTGCTCATACAGATAAAAACTTTGCTTGGTAATTCAACGATCATGCACTGAACTACTTATTTATCTTTTCTATGCCAGGTCTCCAAGGTGTATCAGACTATGAAAATTGAGAGTCTGTCGCAGATGATCCCATTTTTTGATTTTTCTGCCGTGGAGAAAATATCAGTTGATGCAGTTAAACAAAATTTCATTGGCATGAAAGTTGATCATTCGAGGAACATTGTGTTATTTGGCAATCTGGTACTGAAAAAATTCTGTCTTCTTTTCACTTTCTTCCCTTTCTTTTGCACTAAGGGTCAAGGGACAAGGCCGCTGAGATGATTCTTGCCCCCTTAATGTTAATGTATCCCATCTGATTTTTTACTGCCTGTTTAAGATTATGATTTTAAACCCAGGTGATTTGTCTCTGGCTTTTTCAATTTGCTAGTTGACATTATCTTCTACGTGTCTTTAGATATCATTAAAATCACTTAAGTCACTTGTAGATTGAGAAACTGTAATTTGCATGACCTTCCTCCCTAAAGATTGGAGGGGTGGGTTACTGTACAAAAAAGACATTTATATTGGATTTAAGGGGATTACTTTTTCTGTTTTCGTTTATTTATTAAGACTAAGGGATTATAGTCTGTTTTGTATATCTTTAGCATAGCTGCTTTTTTATGGAGTGAAGACTAAAAAGTCATAGTTGTTTTCTATGAATCAATTTAGGGTATCGAATCGGATGGGCTTCGGGACCATCTAACTGTTTTCGCAGAATCCTTAAACAAAGCAAGAGCTATGATCTATCCTCCAGTTTTGAAGGCATCAAAAACAGGTGATATATTGCCAGATTTAGCAGATATTGTCGATAAGGAGCACAAGAGGCTCCTTGCTCGGAAATCTATAATTGAGAAAAGGAAGGAAGAGCAGGAACGACAACTTCTTGAAATGGTACCCTACTCTCATCAAACTGTGGATAACCATATTCATTTTTCTGTTGGTGTATAAATGGAAAAAAGATGTGATGAACTGTGTTTAGGAACGCGAGGAGGAATCAAGAAGGTTAAAATTACAGAAGATAACAGAAGAGGCTGAGCAGAAGCGGCTTGCTGCAGAATATGAACAAAGAAAAAACCAACGGATTCGCAGGGAAATAGAAGAGCGAGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAGCGTGTCGGTAAAAAGAAGGGAAGCAGGAAGCCGGTTCTCGACTCTGTGAGTTCTTTTTTGTTGATTTTTTTTTTCTTATTTCGAAATGATGTAGAATTGATTAATAACATTGGTTATATATCTTTAGGAAAAGTTGACGAAACAAACTTTAATGCAATTGGCCCTTACTGAACAATTAAGGGAGAGGCAGGAAATGGAAAAAAAGTTACAAAAGCTAGCTAAAACTATGGATTATCTAGAAAGAGCAAAAAGAGAAGAAGCTGCAACATTAATTGAAGCTGCATTTCAGCAACGGTTGCTTGAAGAAAGAATGATTCATGAACGTGATCAACAGGTCTTACTTTCTTAGTGATTTTGACTATCATTATATACATTTGGTTGTAGTCGTTTTATTGTTGTTATTATTATTATTTTAAATTGTGAATATGTGCTAATATATCATTTAATTGTTTATTTCTTATAGATAAGGAGGTTTCTCTCATGTATGATACTAAGATTCACAATAGGGATTCTAGTATATCCTCCAGTCACTTAGGCTATATCGCAGAGTTTCTTCTTTCTAGTTCAGATCTCTATAATCCTATGTGAACTTTGATAAAGATATGCAGATGCTTTTAGAATTACAATTTTCCAGGGTTACTTTTAATGTCTCTGACATTGAACCGGTAATTTTTTCTATGGTCTTCTTAGACCTGGTGTACACTAATTTCTAGTCTTACAATGTTTTGCTTTGTTTTATATAAATTCAATCAATCTGTTTTTCTTTTTTGTGTCGTCAATTTTTTCTTGCGATAGCTGATGGTATGTTAATGATAAACAGGTGTTTTTTAGTTCCATTTTATTGAAAATTGAGTTTTTGTTTTGGTTTTCAGCTGGAGGTAGAGTTAAGCAAGCAGCGCCATGAAGGTGACCTCAAGGAAAAGAATCGATTGTCTAGAATGATGGAGAGTAAGGTTAGTAGTTCCATTTTCATATGGCTCTATTGGGTTAGTCTTAAACTTTGTTCCCTCCAAGTTTTAGTATACGTTGGTCTTCGTTATCAGGTACTGTAATCACAATGTTTTTTTATTTAATTGTTTTGTGATTTATAAAATAATCTTATCTATAGATCAAAATATTATAAATCTTATTTTAAAGTCAACCCCTTACACTTGCCCTGTCTTTTTTACTCCGTTTTTTTAATATATGCATTTGTTTATTATGAACGAAGTTAAGTTTGCTTTTTAGAAATATATTTTAATTAGTATTTTCCATATTACATTCTCCAAAACCACTCCTTTAATATAGCAATAATAGGATCGAGAGTGTTGATCATCATGGGTTGGCCTAGTGGTAAAGAAAAGCGACAGTCTCAATAAATGTCTAAGAGGTCATGATGTCAATCCATGGTGGCCACTTGAAAAAAGAAATCTGAATTGGAGCTTTTTGGTGTTTTTGGAATTATGTGATAGTATCCCTCTTATGGGCACATCAGACTTGGGGCGCTTTTTGTTCTTATTTATTACCTGAGAAAATATAATAATAGTATCAATTTTATCATATTTACTTCGTAGGTGTTCTGAAGTGAAATTTGAATGTAGGAATCTTCGCAGAAATTGACTTTTGAGACATGATTAAATTTAACCTTTTGTTTTGTGCTCTGCAGAAAAGTTTCCAAGAAAGAGTAATTAGTCTTCGTCAAGAGGAATTCAGCAGACGTAGAGATGAGAGAGAAGAGCATATCAGGCAAATAATTCAGGCCCGGAAAGCAGAAAGGGAGGCTCAGAGAAAGAAAATCTTTTATGTAAGGCGTGAAGAGGAGAGGATTAGAATATTACGTGAAGAGGAGGAAGCACGCAAGCGTGAAGGTATTTGTTTAAAATGATCTGATTTTCTATGGGGTCAAACATCATTTTGTGCTTTTTGAACATATCGGATATGCACTTATCGACTGCTTAAGAGATCCCTCCTTAGTTTTTCATATAATGTTCATTAGTGTATTTAGCTATAGCTGATATTGGTTGTTTAAAAATGTGTTGATATGTAATTTGTCTTTGGTGATGACATCTTTTGAACTTTTGCAGAGGCGGAGAGGAGAAAGAAGGAAGAAGCTGAACGCAAGGCTAAATTGGATGAGATAGCTGAGAAGCAGAGACAGAGAGAGCGAGAGTTGGAAGAAAAAGAAAGACTGAGGAAAGAAAGTCTCTTTGGTAGTGCCAGATCAGGTGATGCTCCTGCTCGACCTGATGTTGCTCCTAGTTCTCAGCCTCTGGAGCCCGGGACTGCTGCTCCTGCTGCTGCTGCAGCAGCAGCTGCTGCAACATCCCCAGCAAAATACGTGCCAAGGTTTCGACGGACTGAAGCCTCCAACCCTGATGCACCACCACCTGATTCTGGTCGATGGGGAGGCAGCCGGCCTGATAATCGACCATCTCGACCGGACAGTTGGCGTAATGATGACAGCAGATCTGCATTTGGAAGTTCAAGGCCATCATGGTCCTCATCCAGAGCTCCTGCTCGTGCTAGCACTGATCGCTGATTGTGGTGGCAGAAAATTTTTGGGTAGGACCGAGGAAAAGAATAATCACATGTTTTTGCTACTAAACCTACTACTGAAGTTAGGGAAGAAGCAGCAGCGAGAAGGTTGTAATATTTGTTATGTTCTGTTGTGTGTTACATTTATTAGTGGAAGAGTTGTTCTTTTTGTTTTATAATGAAATGAATGTGCTATCACATGGCTACCAATTTATAGGCCAACATTTTTAGTTACATTCTATTTTTCTTTGGTTCTTAAATTTTTCCTTCGATCTTTTGAGGGGGGCCTTGATGAACTGCTGCTTACGAGCATTTTTATGGACTATATATATATGTTAATTGCTCCTTCTTAAGTACATTTCTCTTTTTGTTTGTTTGTTTCCATTAGTAGGAGCTTATCCTCAGGCCTCAAGTTATGTAACTATTAGAAAATCTCATTTTATGAAGTACGATTCAAGCTGTATTACCTGAATTTCAAACGAGTTTTCAGAGCC

mRNA sequence

CTACTCCTCCGGCAGCTGAGTGTTGCCGCTCCTTTGCTCCAGTTCACGGCTGCTGCTGCAGCCATCGTCTTTCCTCCCTTCGCGCCGCCGAAGCTTCAGTCACAGTGGTTTTGCTCTGATTTTCTACTCCTTTTCTGTTACTGGTCATTCGGCTTTGGGTGAGCTAAACATTGGATTGAGATATGGCATCTTTTGTAAAGCCAGAGAATGCTCTAAAACGAGCCGAAGAGCTGATAAATGTTGGCCAGAAGCAAGATGCCTTGCAAGCCCTTCATGATCTTATCACTTCAAAAAAATATCGAGCATGGCAGAAACCTCTTGAGAGGATTATGTTTAAATATGTTGAGCTCTGTGTGGACATGAGGAAAGGAAGGTTTGCTAAGGATGGTTTGATTCAATATCGTATTGTTTGCCAGCAAGTCAATGTTACTTCCTTGGAGGAAGTAATCAAGCACTTCATGCATCTTTCCACTGAGAAGGCAGAGCAGGCTCGTACTCAAGCTCAAGCCTTAGAAGAAGCTCTGGACGTTGATGATTTGGAAGCTGATAAAAGACCGGAAGATCTGATGCTTAGTTATGTTAGTGGTGAAAAGGGAAAAGATAGATCTGATCGTGAACTTGTTACCCCCTGGTTTAAATTTCTGTGGGAGACCTATAGAACGGTTCTTGATATACTAAGGAATAACTCAAAGTTGGAGGCACTTTATGCGATGACAGCTCATCGTGCCTTCCAGTTCTGTAAAGTGTATAAAAGAACAACAGAGTTTCGTAGGTTATGTGAAATTATCAGAAATCATCTTGCTAATCTCAATAAGTATAGAGACCAAAGGGATCGGCCTGATCTTTCTGCCCCAGAGAGTTTGCAATTGTACCTTGACACAAGATTTGAACAGCTGAAGGTTGCCACAGAGCTTGAGCTCTGGCAGGAAGCTTTTCGTTCCGTGGAAGATATTCATGGATTGATGTGCATGGTGAAGAAAACACCCAAACCATCTTTGATGGTGGTGTATTACGTCAAATTAACAGAGATTTTCTGGATATCAGATAGCAATCTTTATCATGCTTATGCATGGCTTAAACTTTTCTCCCTTCAGAAGAGTTTCAACAAAAATTTAAGCCAGAAGGATTTGCAGCTGATAGCTTCTTCTGTTCTTTTAGCAGCACTTGCAGTGTCTCCCTACGACTCTAAGCATGGTGCATCTCATTTAGAACTTGAACATGAGAAAGAACGGAATTTGAGGATGGCCAATCTTATAGGGTTCAGTTTAGATTCCAAACTTGAAAGTAGAGATGTGCTTTCAAGGGAAAATCTTTTTTCTGAACTGGTGTCTAAAGGAGTCCTAAGCTGTGCAACTCAAGAAGTTAAAGATCTTTATCATCTTTTGGAGCACGAATTCTTCCATCTTGACCTTGCAACAAAACTGCAACCCTTGCTAAACAAAGTGTCAAAGCTTGGAGGTAAGCTTTCATCAGCTTCATCTGTCCCTGAAGTCCAATTGTCCCAATATGTTCCTGCTCTTGAAAAACTTGCTACCCTGAGGCTGCTTCAGCAGGTCTCCAAGGTGTATCAGACTATGAAAATTGAGAGTCTGTCGCAGATGATCCCATTTTTTGATTTTTCTGCCGTGGAGAAAATATCAGTTGATGCAGTTAAACAAAATTTCATTGGCATGAAAGTTGATCATTCGAGGAACATTGTGTTATTTGGCAATCTGGGTATCGAATCGGATGGGCTTCGGGACCATCTAACTGTTTTCGCAGAATCCTTAAACAAAGCAAGAGCTATGATCTATCCTCCAGTTTTGAAGGCATCAAAAACAGGTGATATATTGCCAGATTTAGCAGATATTGTCGATAAGGAGCACAAGAGGCTCCTTGCTCGGAAATCTATAATTGAGAAAAGGAAGGAAGAGCAGGAACGACAACTTCTTGAAATGGAACGCGAGGAGGAATCAAGAAGGTTAAAATTACAGAAGATAACAGAAGAGGCTGAGCAGAAGCGGCTTGCTGCAGAATATGAACAAAGAAAAAACCAACGGATTCGCAGGGAAATAGAAGAGCGAGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAGCGTGTCGGTAAAAAGAAGGGAAGCAGGAAGCCGGTTCTCGACTCTGAAAAGTTGACGAAACAAACTTTAATGCAATTGGCCCTTACTGAACAATTAAGGGAGAGGCAGGAAATGGAAAAAAAGTTACAAAAGCTAGCTAAAACTATGGATTATCTAGAAAGAGCAAAAAGAGAAGAAGCTGCAACATTAATTGAAGCTGCATTTCAGCAACGGTTGCTTGAAGAAAGAATGATTCATGAACGTGATCAACAGCTGGAGGTAGAGTTAAGCAAGCAGCGCCATGAAGGTGACCTCAAGGAAAAGAATCGATTGTCTAGAATGATGGAGAGTAAGAAAAGTTTCCAAGAAAGAGTAATTAGTCTTCGTCAAGAGGAATTCAGCAGACGTAGAGATGAGAGAGAAGAGCATATCAGGCAAATAATTCAGGCCCGGAAAGCAGAAAGGGAGGCTCAGAGAAAGAAAATCTTTTATGTAAGGCGTGAAGAGGAGAGGATTAGAATATTACGTGAAGAGGAGGAAGCACGCAAGCGTGAAGAGGCGGAGAGGAGAAAGAAGGAAGAAGCTGAACGCAAGGCTAAATTGGATGAGATAGCTGAGAAGCAGAGACAGAGAGAGCGAGAGTTGGAAGAAAAAGAAAGACTGAGGAAAGAAAGTCTCTTTGGTAGTGCCAGATCAGGTGATGCTCCTGCTCGACCTGATGTTGCTCCTAGTTCTCAGCCTCTGGAGCCCGGGACTGCTGCTCCTGCTGCTGCTGCAGCAGCAGCTGCTGCAACATCCCCAGCAAAATACGTGCCAAGGTTTCGACGGACTGAAGCCTCCAACCCTGATGCACCACCACCTGATTCTGGTCGATGGGGAGGCAGCCGGCCTGATAATCGACCATCTCGACCGGACAGTTGGCGTAATGATGACAGCAGATCTGCATTTGGAAGTTCAAGGCCATCATGGTCCTCATCCAGAGCTCCTGCTCGTGCTAGCACTGATCGCTGATTGTGGTGGCAGAAAATTTTTGGGTAGGACCGAGGAAAAGAATAATCACATGTTTTTGCTACTAAACCTACTACTGAAGTTAGGGAAGAAGCAGCAGCGAGAAGGTTGTAATATTTGTTATGTTCTGTTGTGTGTTACATTTATTAGTGGAAGAGTTGTTCTTTTTGTTTTATAATGAAATGAATGTGCTATCACATGGCTACCAATTTATAGGCCAACATTTTTAGTTACATTCTATTTTTCTTTGGTTCTTAAATTTTTCCTTCGATCTTTTGAGGGGGGCCTTGATGAACTGCTGCTTACGAGCATTTTTATGGACTATATATATATGTTAATTGCTCCTTCTTAAGTACATTTCTCTTTTTGTTTGTTTGTTTCCATTAGTAGGAGCTTATCCTCAGGCCTCAAGTTATGTAACTATTAGAAAATCTCATTTTATGAAGTACGATTCAAGCTGTATTACCTGAATTTCAAACGAGTTTTCAGAGCC

Coding sequence (CDS)

ATGGCATCTTTTGTAAAGCCAGAGAATGCTCTAAAACGAGCCGAAGAGCTGATAAATGTTGGCCAGAAGCAAGATGCCTTGCAAGCCCTTCATGATCTTATCACTTCAAAAAAATATCGAGCATGGCAGAAACCTCTTGAGAGGATTATGTTTAAATATGTTGAGCTCTGTGTGGACATGAGGAAAGGAAGGTTTGCTAAGGATGGTTTGATTCAATATCGTATTGTTTGCCAGCAAGTCAATGTTACTTCCTTGGAGGAAGTAATCAAGCACTTCATGCATCTTTCCACTGAGAAGGCAGAGCAGGCTCGTACTCAAGCTCAAGCCTTAGAAGAAGCTCTGGACGTTGATGATTTGGAAGCTGATAAAAGACCGGAAGATCTGATGCTTAGTTATGTTAGTGGTGAAAAGGGAAAAGATAGATCTGATCGTGAACTTGTTACCCCCTGGTTTAAATTTCTGTGGGAGACCTATAGAACGGTTCTTGATATACTAAGGAATAACTCAAAGTTGGAGGCACTTTATGCGATGACAGCTCATCGTGCCTTCCAGTTCTGTAAAGTGTATAAAAGAACAACAGAGTTTCGTAGGTTATGTGAAATTATCAGAAATCATCTTGCTAATCTCAATAAGTATAGAGACCAAAGGGATCGGCCTGATCTTTCTGCCCCAGAGAGTTTGCAATTGTACCTTGACACAAGATTTGAACAGCTGAAGGTTGCCACAGAGCTTGAGCTCTGGCAGGAAGCTTTTCGTTCCGTGGAAGATATTCATGGATTGATGTGCATGGTGAAGAAAACACCCAAACCATCTTTGATGGTGGTGTATTACGTCAAATTAACAGAGATTTTCTGGATATCAGATAGCAATCTTTATCATGCTTATGCATGGCTTAAACTTTTCTCCCTTCAGAAGAGTTTCAACAAAAATTTAAGCCAGAAGGATTTGCAGCTGATAGCTTCTTCTGTTCTTTTAGCAGCACTTGCAGTGTCTCCCTACGACTCTAAGCATGGTGCATCTCATTTAGAACTTGAACATGAGAAAGAACGGAATTTGAGGATGGCCAATCTTATAGGGTTCAGTTTAGATTCCAAACTTGAAAGTAGAGATGTGCTTTCAAGGGAAAATCTTTTTTCTGAACTGGTGTCTAAAGGAGTCCTAAGCTGTGCAACTCAAGAAGTTAAAGATCTTTATCATCTTTTGGAGCACGAATTCTTCCATCTTGACCTTGCAACAAAACTGCAACCCTTGCTAAACAAAGTGTCAAAGCTTGGAGGTAAGCTTTCATCAGCTTCATCTGTCCCTGAAGTCCAATTGTCCCAATATGTTCCTGCTCTTGAAAAACTTGCTACCCTGAGGCTGCTTCAGCAGGTCTCCAAGGTGTATCAGACTATGAAAATTGAGAGTCTGTCGCAGATGATCCCATTTTTTGATTTTTCTGCCGTGGAGAAAATATCAGTTGATGCAGTTAAACAAAATTTCATTGGCATGAAAGTTGATCATTCGAGGAACATTGTGTTATTTGGCAATCTGGGTATCGAATCGGATGGGCTTCGGGACCATCTAACTGTTTTCGCAGAATCCTTAAACAAAGCAAGAGCTATGATCTATCCTCCAGTTTTGAAGGCATCAAAAACAGGTGATATATTGCCAGATTTAGCAGATATTGTCGATAAGGAGCACAAGAGGCTCCTTGCTCGGAAATCTATAATTGAGAAAAGGAAGGAAGAGCAGGAACGACAACTTCTTGAAATGGAACGCGAGGAGGAATCAAGAAGGTTAAAATTACAGAAGATAACAGAAGAGGCTGAGCAGAAGCGGCTTGCTGCAGAATATGAACAAAGAAAAAACCAACGGATTCGCAGGGAAATAGAAGAGCGAGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAGCGTGTCGGTAAAAAGAAGGGAAGCAGGAAGCCGGTTCTCGACTCTGAAAAGTTGACGAAACAAACTTTAATGCAATTGGCCCTTACTGAACAATTAAGGGAGAGGCAGGAAATGGAAAAAAAGTTACAAAAGCTAGCTAAAACTATGGATTATCTAGAAAGAGCAAAAAGAGAAGAAGCTGCAACATTAATTGAAGCTGCATTTCAGCAACGGTTGCTTGAAGAAAGAATGATTCATGAACGTGATCAACAGCTGGAGGTAGAGTTAAGCAAGCAGCGCCATGAAGGTGACCTCAAGGAAAAGAATCGATTGTCTAGAATGATGGAGAGTAAGAAAAGTTTCCAAGAAAGAGTAATTAGTCTTCGTCAAGAGGAATTCAGCAGACGTAGAGATGAGAGAGAAGAGCATATCAGGCAAATAATTCAGGCCCGGAAAGCAGAAAGGGAGGCTCAGAGAAAGAAAATCTTTTATGTAAGGCGTGAAGAGGAGAGGATTAGAATATTACGTGAAGAGGAGGAAGCACGCAAGCGTGAAGAGGCGGAGAGGAGAAAGAAGGAAGAAGCTGAACGCAAGGCTAAATTGGATGAGATAGCTGAGAAGCAGAGACAGAGAGAGCGAGAGTTGGAAGAAAAAGAAAGACTGAGGAAAGAAAGTCTCTTTGGTAGTGCCAGATCAGGTGATGCTCCTGCTCGACCTGATGTTGCTCCTAGTTCTCAGCCTCTGGAGCCCGGGACTGCTGCTCCTGCTGCTGCTGCAGCAGCAGCTGCTGCAACATCCCCAGCAAAATACGTGCCAAGGTTTCGACGGACTGAAGCCTCCAACCCTGATGCACCACCACCTGATTCTGGTCGATGGGGAGGCAGCCGGCCTGATAATCGACCATCTCGACCGGACAGTTGGCGTAATGATGACAGCAGATCTGCATTTGGAAGTTCAAGGCCATCATGGTCCTCATCCAGAGCTCCTGCTCGTGCTAGCACTGATCGCTGA

Protein sequence

MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDMRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAHRAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKLFSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGFSLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNKVSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFSAVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPVLKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKITEEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLTKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIHERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQIIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAEKQRQRERELEEKERLRKESLFGSARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAATSPAKYVPRFRRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSRSAFGSSRPSWSSSRAPARASTDR*

Homology

[Close]

BLAST of CSPI01G24900 vs. ExPASy Swiss-Prot
Match: Q9LD55 (Eukaryotic translation initiation factor 3 subunit A OS=Arabidopsis thaliana OX=3702 GN=TIF3A1 PE=1 SV=1)

HSP 1 Score: 1276.9 bits (3303), Expect = 0.0e+00
Identity = 727/990 (73.43%), Postives = 832/990 (84.04%), Query Frame = 0


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MA+F KPENALKRA+ELINVGQKQDALQALHDLITSK+YRAWQKPLE+IMFKY++LCVD+
Sbjct: 1   MANFAKPENALKRADELINVGQKQDALQALHDLITSKRYRAWQKPLEKIMFKYLDLCVDL 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120
           ++GRFAKDGLIQYRIVCQQVNV+SLEEVIKHF+HL+T+KAEQAR+QA ALEEALDVDDLE
Sbjct: 61  KRGRFAKDGLIQYRIVCQQVNVSSLEEVIKHFLHLATDKAEQARSQADALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180
           AD++PEDL LS VSGEKGKDRSDRELVTPWFKFLWETYRTVL+ILRNNSKLEALYAMTAH
Sbjct: 121 ADRKPEDLQLSIVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           +AFQFCK YKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRF+QLKV
Sbjct: 181 KAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFDQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATEL LWQEAFRSVEDI+GLMCMVKKTPK SL++VYY KLTEIFWIS S+LYHAYAW KL
Sbjct: 241 ATELGLWQEAFRSVEDIYGLMCMVKKTPKSSLLMVYYSKLTEIFWISSSHLYHAYAWFKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360
           FSLQK+FNKNLSQKDLQLIASSV+LAAL++ P+D    ASH+ELE+EKERNLRMANLIGF
Sbjct: 301 FSLQKNFNKNLSQKDLQLIASSVVLAALSIPPFDRAQSASHMELENEKERNLRMANLIGF 360

Query: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420
           +L+ K E +D+LSR  L SELVSKGVLSCA+QEVKDL+H+LEHEF  LDL +K+QPLL K
Sbjct: 361 NLEPKFEGKDMLSRSALLSELVSKGVLSCASQEVKDLFHVLEHEFHPLDLGSKIQPLLEK 420

Query: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480
           +SK GGKLSSA S+PEVQLSQYVP+LEKLATLRLLQQVSK+YQT++IESLSQ++PFF FS
Sbjct: 421 ISKSGGKLSSAPSLPEVQLSQYVPSLEKLATLRLLQQVSKIYQTIRIESLSQLVPFFQFS 480

Query: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540
            VEKISVDAVK NF+ MKVDH + +V+FGNLGIESDGLRDHL VFAESL+K RAM+YP  
Sbjct: 481 EVEKISVDAVKNNFVAMKVDHMKGVVIFGNLGIESDGLRDHLAVFAESLSKVRAMLYPVP 540

Query: 541 LKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600
            KASK   ++P+LAD V+KEHKRLLARKSIIEKRKE+QERQ LEMEREEE +RLKLQK+T
Sbjct: 541 SKASKLAGVIPNLADTVEKEHKRLLARKSIIEKRKEDQERQQLEMEREEEQKRLKLQKLT 600

Query: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLAAE  +R+ QRI REIEE+ELEEAQALL+E EKR+  KKG +KP+LD EK+T
Sbjct: 601 EEAEQKRLAAELAERRKQRILREIEEKELEEAQALLEETEKRM--KKGKKKPLLDGEKVT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720
           KQ++ + ALTEQL+ERQEMEKKLQKLAKTMDYLERAKREEAA LIEAA+Q+RL+EER  +
Sbjct: 661 KQSVKERALTEQLKERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQRRLVEEREFY 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780
           ER+QQ EVELSK+RHE DLKEKNRLSRM+ +K+ FQ +VIS RQ EF R R EREE I +
Sbjct: 721 EREQQREVELSKERHESDLKEKNRLSRMLGNKEIFQAQVISRRQAEFDRIRTEREERISK 780

Query: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840
           II+ +K ER+ +RK+I+Y++ EEERIR L+EEEEARK+EEAER KK EAERKA LD+  E
Sbjct: 781 IIREKKQERDIKRKQIYYLKIEEERIRKLQEEEEARKQEEAERLKKVEAERKANLDKAFE 840

Query: 841 KQRQRERELEEKERLRKESLFGSARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAATS 900
           KQRQRE ELEEK R  +E L    R  +AP      P+  P+  GT APAAAAAAA A +
Sbjct: 841 KQRQREIELEEKSRREREELL---RGTNAPPARLAEPTVTPV--GTTAPAAAAAAAGAPA 900

Query: 901 PAKYVPRFRR--TEASNPDA-------------PPPDSGRWGGSR----------PDNRP 956
            A YVP+++R  TE S P A             PPP    WG +R           +   
Sbjct: 901 -APYVPKWKRQTTEVSGPSAPTSSETDRRSNRGPPPGDDHWGSNRGAAQNTDRWTSNRER 960

[Close]

BLAST of CSPI01G24900 vs. ExPASy Swiss-Prot
Match: Q40554 (Eukaryotic translation initiation factor 3 subunit A OS=Nicotiana tabacum OX=4097 GN=TIF3A1 PE=2 SV=1)

HSP 1 Score: 1256.9 bits (3251), Expect = 0.0e+00
Identity = 717/966 (74.22%), Postives = 825/966 (85.40%), Query Frame = 0


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MA+F KPENALKRAEELI VGQKQ+ALQALHDLITS++YRAWQK LERIMFKYVELCVDM
Sbjct: 1   MATFAKPENALKRAEELITVGQKQEALQALHDLITSRRYRAWQKTLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120
           R+GRFAKDGLIQYRIVCQQVN+ SLEEVIKHFMHL+TE+AE AR QAQALEEALDV+DLE
Sbjct: 61  RRGRFAKDGLIQYRIVCQQVNINSLEEVIKHFMHLATERAELARNQAQALEEALDVEDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVL+ILRNNS+LEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSRLEALYAMTAH 180

Query: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCK YKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATEL LWQEAFRS+EDI+GLMCMVKKTPK SLMVVYY KLTEIFW+S ++LYHAYAWLKL
Sbjct: 241 ATELGLWQEAFRSIEDIYGLMCMVKKTPKASLMVVYYGKLTEIFWMSSNHLYHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360
           FSLQKSFNKNLSQKDLQLIASSV+LAAL+V PYD  +GASHLELE+EKER+LR+ANLIGF
Sbjct: 301 FSLQKSFNKNLSQKDLQLIASSVVLAALSVPPYDQSYGASHLELENEKERSLRVANLIGF 360

Query: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420
            ++ K E+R  LSR +L SELVSKGV+SC TQEVKDLYHLLE+EF  LDLA K+QP+L+K
Sbjct: 361 EVEPKAENRVALSRSSLLSELVSKGVMSCVTQEVKDLYHLLENEFLPLDLALKVQPVLSK 420

Query: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480
           +SKLGGKLSS SSVPEVQLSQYVPALEKLATLRLLQQVS+VYQT++I+++S+MIPFFDF+
Sbjct: 421 ISKLGGKLSSVSSVPEVQLSQYVPALEKLATLRLLQQVSQVYQTIQIDNISKMIPFFDFT 480

Query: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540
            +EKISVDAV++NF+ +KVDH + +    N  +            AESL+KAR MIYPP 
Sbjct: 481 VIEKISVDAVRRNFLAIKVDHMKGLSSLVNRVLRRKDSGIICLFLAESLSKARTMIYPPA 540

Query: 541 LKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600
            KA+K G+ L +LA+IV+KEHKRLLARKSIIEKRKEEQER LLEMER EE++R  +QK+T
Sbjct: 541 KKAAKLGEALSNLAEIVEKEHKRLLARKSIIEKRKEEQERLLLEMERVEETKRRDVQKMT 600

Query: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKR+AAEYEQR+NQRI +EIE+RELEEAQALL EAEKR  +KK   KPVL+ EK+T
Sbjct: 601 EEAEQKRIAAEYEQRRNQRILKEIEDRELEEAQALLHEAEKRSKRKK---KPVLEGEKMT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720
           K+ +M+LAL EQLRERQEMEKKL K AK+MD+LERAKREEAA LIE+AF+QRL EE  +H
Sbjct: 661 KKVIMELALNEQLRERQEMEKKLLKFAKSMDHLERAKREEAAPLIESAFKQRLAEEAALH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780
           ER+QQ E+ELS+QRH GDL+EK RL+RM+E+K+  QE+V+S R+ EF+R + ER+E I Q
Sbjct: 721 EREQQQEIELSRQRHAGDLEEKRRLARMLENKRILQEKVVSSREAEFTRMKRERQERISQ 780

Query: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840
           IIQ+RK EREA+RK IF++R EEER + L+EEEEARKREEAERRKKEEAER+AKLDEIAE
Sbjct: 781 IIQSRKQEREARRKMIFFLRSEEERQKRLQEEEEARKREEAERRKKEEAERQAKLDEIAE 840

Query: 841 KQRQRERELEEKE-RLRKESLFGSARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAAT 900
           KQR+R  ELEEKE R R+E L  S      PA P      +P E G AAP  AAAA A T
Sbjct: 841 KQRRRMLELEEKEKREREEILRKSTAVLPKPAEPPTL--GRPAELGGAAPIPAAAATAPT 900

Query: 901 -SPAKYVPRFRRTEASNP-DAPPPDSGRW-GGSRPDNRPSRPDSWRNDDSRSAFGS-SRP 960
             P KYVP+  RT+      APPP++ +W GGS+PD+RP    SWR++    +FGS SR 
Sbjct: 901 PGPGKYVPKHLRTKMDGAGQAPPPETDKWGGGSKPDDRP----SWRDERKPPSFGSGSRT 957

Query: 961 SWSSSR 962
           SW +SR
Sbjct: 961 SWPASR 957

[Close]

BLAST of CSPI01G24900 vs. ExPASy Swiss-Prot
Match: Q9XHR2 (Eukaryotic translation initiation factor 3 subunit A OS=Zea mays OX=4577 GN=TIF3A1 PE=2 SV=1)

HSP 1 Score: 1150.6 bits (2975), Expect = 0.0e+00
Identity = 664/974 (68.17%), Postives = 781/974 (80.18%), Query Frame = 0


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MA+F KPENALKRAEELI+VGQKQ ALQALHDLITSK+YR+WQKPLE+IM KYVELCVD+
Sbjct: 1   MATFAKPENALKRAEELIHVGQKQSALQALHDLITSKRYRSWQKPLEKIMMKYVELCVDL 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNV+SLE+VIKHFM LS EKAEQA++Q +ALE+ALDV+DLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVSSLEDVIKHFMQLSNEKAEQAKSQVEALEDALDVEDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180
           ADKRPEDLMLS+VSGEKGKDRSD+E+VTPWFKFLWETYRTVL+ILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSFVSGEKGKDRSDKEVVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCK YKRTTEFR     IRNHLANLNKYRDQRDRPDL+APESLQLYLDTR EQLKV
Sbjct: 181 RAFQFCKQYKRTTEFRSCVRSIRNHLANLNKYRDQRDRPDLTAPESLQLYLDTRVEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATEL LWQEAFRSVEDIHGLM MVKK PKPS++VVYY KLTEIFWISDS+LYHAYAWLKL
Sbjct: 241 ATELSLWQEAFRSVEDIHGLMTMVKKMPKPSILVVYYAKLTEIFWISDSHLYHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360
           F+LQKS+NKNLSQKDLQLIASSVLLAAL+VSPYD K+GA   E E+EKERN+R++NL+ F
Sbjct: 301 FNLQKSYNKNLSQKDLQLIASSVLLAALSVSPYDKKYGA--FETENEKERNMRLSNLVNF 360

Query: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420
           SLD+K E+R++ SR  L SEL SKGVLSCA+QEV+DLY+LLEH F  LDLA+K+QPLL K
Sbjct: 361 SLDNKRENREMPSRPYLLSELASKGVLSCASQEVRDLYNLLEHRFLPLDLASKVQPLLLK 420

Query: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480
           +SK+GGKLSSASSVPEV+LSQY+ ALEKL TLR+LQQ S +++++KI+ LS+MIPFFDFS
Sbjct: 421 ISKIGGKLSSASSVPEVKLSQYISALEKLTTLRVLQQASCIFKSIKIDMLSRMIPFFDFS 480

Query: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540
            VEKISVDA KQNF+ +KVDH   +V FG + IESDGL DHL+V A+SLNKAR  I PPV
Sbjct: 481 VVEKISVDAAKQNFVAIKVDHLSGVVQFGTVDIESDGLSDHLSVLADSLNKARIHICPPV 540

Query: 541 LKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600
            K SK G+ L  LA IV+ EHKRLLARKSIIEKRKEE ERQ+LE E+EEE +R+  QK T
Sbjct: 541 KKPSKLGESLISLAAIVENEHKRLLARKSIIEKRKEELERQILEKEKEEEKKRMSSQKKT 600

Query: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
            + E+ RL  E  QR+  RIRREIEE+   EA+ +L++        K  +K V+   +LT
Sbjct: 601 VDEERVRLLNEQRQREQDRIRREIEEKNKAEAKKMLEDL------NKAGKKHVVVEGELT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720
           K+  M+LA  EQL+ER EMEKKLQK AKTMDYLERAKR+E A LIE AFQ+RL EE+++H
Sbjct: 661 KEAYMELARNEQLKERHEMEKKLQKFAKTMDYLERAKRQEEAPLIEQAFQKRLEEEKILH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780
           E++Q  E+ELSKQ H  DL+EKNRLSRM+E K + QER+I  R  EF R + ER+E + +
Sbjct: 721 EQEQLREIELSKQHHASDLQEKNRLSRMLEHKNALQERIIQERAAEFGRLKKERDERMNR 780

Query: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840
           +I +RK ERE  RK +FY+  EE+RI +LREEEEARKRE  ERRK+EEAERKAKLD IAE
Sbjct: 781 LISSRKHERETVRKLMFYLNLEEQRIEMLREEEEARKREAEERRKREEAERKAKLDAIAE 840

Query: 841 KQRQRERELEEKERLRKESLFGSARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAATS 900
           KQR RE ELEEK +  +E L    +  +A   PD AP +QP  P  +A AAAAAAAAA +
Sbjct: 841 KQRLREIELEEKAKATREKLL---KGSEAVRAPDSAPVAQP--PRESAAAAAAAAAAAPA 900

Query: 901 PAKYVPRFRR-TEASNPDAPPPDSGRWGGSRP---DNRPSR---------PDSWRNDDSR 960
           P+KY+P+F+R  ++S+  +   D  RWG   P   D  P+R          D WR     
Sbjct: 901 PSKYIPKFKRGGDSSSIPSGSRDEDRWGSRGPLRQDGPPARLDAPSSRQDTDRWRGSRFP 960

Query: 961 SAFGSSRPSWSSSR 962
           S   SS  +WS SR
Sbjct: 961 SNSTSSSSTWSRSR 961

[Close]

BLAST of CSPI01G24900 vs. ExPASy Swiss-Prot
Match: Q6PCR7 (Eukaryotic translation initiation factor 3 subunit A OS=Danio rerio OX=7955 GN=eif3a PE=2 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 8.3e-137
Identity = 336/892 (37.67%), Postives = 541/892 (60.65%), Query Frame = 0


Query: 2   ASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDMR 61
           A F +PENALKRA E + VG+KQ AL  L+D+I SKK+R WQK  E IM KY+ELCVD+R
Sbjct: 3   AYFQRPENALKRANEFLEVGKKQPALDVLYDVIKSKKHRTWQKIHEPIMLKYLELCVDLR 62

Query: 62  KGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLEA 121
           K   AK+GL QY+ +CQQVN+ SLE+V++ ++ L+ EK E A+ ++Q +   LD++DL+ 
Sbjct: 63  KSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKLAEEKTETAKEESQQM--VLDIEDLDN 122

Query: 122 DKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAHR 181
            + PE ++LS VSGE  +DR+DR L+TPW KFLWE+YR  LD+LRNNSK+E LY   A +
Sbjct: 123 IQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSKVERLYHDIAQQ 182

Query: 182 AFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVA 241
           AF+FC  Y R  EFR+LC+ +R HL  + ++ +Q    +L+ PES  ++L+TR  QL  A
Sbjct: 183 AFKFCLQYTRKAEFRKLCDNLRMHLGQIQRHHNQSTAINLNNPESQSMHLETRLVQLDSA 242

Query: 242 TELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKLF 301
             +ELWQEAF++VEDIHGL  + KK PKP LM  YY K++ +FW S + L+H+    +L+
Sbjct: 243 ISMELWQEAFKAVEDIHGLFALSKKPPKPQLMANYYNKVSTVFWKSGNALFHSCTLHRLY 302

Query: 302 SLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHE---KERNLRMANLI 361
            L +   KNL+Q+++Q +++ VLLA L++     +   + L L+ +    E++ R+A L+
Sbjct: 303 HLSREMRKNLTQEEMQRMSTRVLLATLSIPITPERTDIARL-LDMDGIIVEKHRRLATLL 362

Query: 362 GFSLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLL 421
           G         +   +R++L +++V   +L     EVK+LY+ LE +F  L L  ++  +L
Sbjct: 363 GL--------QSPPTRQSLINDMVRFNLLQYVVPEVKELYNWLEVDFHPLKLCGRVTKVL 422

Query: 422 NKVSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFD 481
           N V     K        E  L QYVP L+    LRLLQQV+++YQ+++   L+ ++PF D
Sbjct: 423 NWVRDQAEK--------ESDLQQYVPHLQNNTILRLLQQVAQIYQSIEFSRLASLVPFVD 482

Query: 482 FSAVEKISVDAVKQNFIGMKVDHSRNIVLFGN----------------LGIESDGLRDHL 541
              +E+  VDA +   + +++DHS   + FG+                  + S+ +R+ L
Sbjct: 483 AFQLERSIVDAARHCDLQVRIDHSSRTLSFGSDLNYSTKEDSPVGPFLQNMPSEQIRNQL 542

Query: 542 TVFAESLNKARAMIYPPVL---KASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQE 601
           T  + SL KA  +I P  +      +    +        KEH+R+LAR+  IE+RKE  E
Sbjct: 543 TAMSSSLAKAIQVIKPASILQDHEEQRQQAITAYLKNARKEHQRILARRQTIEERKERLE 602

Query: 602 RQLLEMEREE-ESRRLKLQKITEEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQE 661
              ++ E+EE E R  +LQK+  +AE++RL  E ++R+ +RI +E E+ + +  +  L++
Sbjct: 603 SLNIQREKEELEQREAELQKV-RKAEEERLRQEAKEREKERIMQEHEQIKKKTVRERLEQ 662

Query: 662 AEK-RVGKKKGSRKPVLDSEKLTKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAK 721
            +K  +G K      + D E+L    +M   + +  +E++E++++L+   K +DY ERAK
Sbjct: 663 IKKTELGAKAFKDIDIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAK 722

Query: 722 REEAATLIEAAFQQRLLEERMIHERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQE 781
           R E   LI+ A++++ +++  + E  ++  +   K   E  L+ K R+SRMME K++F  
Sbjct: 723 RLEEIPLIKKAYEEQRIKDMELWELQEEERITNMKMEREKALEHKQRMSRMMEDKENFLS 782

Query: 782 RVISLR----QEEFSRRRDEREEHIRQIIQARKAEREAQRKKIFYVRREEERIRI----L 841
           ++ + R    +E+  + ++   E  ++ ++ RK +R+  R+K FY ++EEE  RI    L
Sbjct: 783 KIKAARSFIYEEKLKQFQERLVEERKKRLEERKKQRKEDRRKAFYHQKEEEAQRIREEQL 842

Query: 842 REEEEARKREEAERRKKEE---AERKAKLDEIAEKQRQRERELEEKERLRKE 859
           ++E E R+R E E+R++EE    ER  KL+E   KQR R++E+EE+ER ++E
Sbjct: 843 KKEREERERLEQEQREEEEREYQERLRKLEEQERKQRARQQEIEERERRKEE 874

[Close]

BLAST of CSPI01G24900 vs. ExPASy Swiss-Prot
Match: Q4P358 (Eukaryotic translation initiation factor 3 subunit A OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=TIF32 PE=3 SV=2)

HSP 1 Score: 471.9 bits (1213), Expect = 1.8e-131
Identity = 361/1033 (34.95%), Postives = 561/1033 (54.31%), Query Frame = 0


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQ-KPLERIMFKYVELCVD 60
           M  F KPE  LKR+EELINVGQ Q AL AL+++ TS++++    + LE IM ++V+LCVD
Sbjct: 1   MPPFAKPETVLKRSEELINVGQHQAALAALNEIFTSRRFKQTPLQSLEPIMLRFVDLCVD 60

Query: 61  MRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDL 120
           ++KGR AK+GL+QY+ V Q  N  S+E VIKHF+ L+  K  +A+++A A    +DVDDL
Sbjct: 61  LKKGRMAKEGLMQYKNVSQNTNAQSIELVIKHFIKLADAKVVEAQSKADAAVGEIDVDDL 120

Query: 121 EADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTA 180
           E  + PE ++L  VS ++ KDR+DR LVTPW KFLWE YRT LDILRNN++LE  Y   A
Sbjct: 121 EESETPESMLLGSVSADQNKDRTDRVLVTPWLKFLWEAYRTALDILRNNARLEVPYQQIA 180

Query: 181 HRAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLK 240
           ++A +FC  Y+R TEFRRLCE++R HL N+ +Y       +L+  ++LQ +LDTRF QL 
Sbjct: 181 NQALKFCLQYQRKTEFRRLCEVLRQHLQNVARYSHHAHAINLTDQDTLQRHLDTRFAQLN 240

Query: 241 VATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLK 300
            A ELELWQEAFRSVEDIH L+ M KK P+P++M  YY KL  IF +SD+NL+HA AW +
Sbjct: 241 SAVELELWQEAFRSVEDIHNLLTMAKKAPRPAMMANYYEKLARIFMVSDNNLFHAAAWNR 300

Query: 301 LFSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDS---------KHGASHLELEHE-KE 360
            ++L +S  K  S+++   IAS VL++ALAV    S         K  +  L+ +HE + 
Sbjct: 301 YYALARSIAK--SEQEHTQIASYVLISALAVPVISSNAPGTGNLHKSKSDFLQADHEARS 360

Query: 361 RNLRMANLIGFSLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLD 420
           R  R+ +L+G S           +R  L  E +++ +L  A  E+++LY++LE EF  L 
Sbjct: 361 RTGRLTSLLGLSRTP--------TRAGLLKEALNRDILKKARPELRELYNILEVEFHPLS 420

Query: 421 LATKLQPLLNKVSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIES 480
           +  K++P+L  +S+            + ++++YV  L  +   RL QQ+S+VY  +K+  
Sbjct: 421 ICAKIEPILASISQ------------DAEMAKYVKPLHSVVLTRLFQQLSQVYDAVKLSK 480

Query: 481 LSQMIPFFDF------SAVEKISVDAVKQNFIGMKVDHSRNIVLF--------------- 540
           + Q++  F        + +EK  ++A K+  + +++DH    + F               
Sbjct: 481 VMQLVSAFKAPHSYTPAEIEKFCLNACKKGHLNIRIDHVAQAITFQDDVFSTDVHPAASA 540

Query: 541 ----GNLGIE---SDGLRDHLTVFAESLNKARAMIYPPVLKASKTG--DILPDLADIVDK 600
                N+G++   S+ +R  L+  A  L+     I P +L  ++     +        + 
Sbjct: 541 SSEADNVGLQASPSELVRTQLSRLATCLDTTLKTIDPTILADAQAAKRHVFARAVAAAED 600

Query: 601 EHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKITEEAEQKRLAAEYEQRKNQR 660
           EHK  +ARK+++ +RKE  E      EREE + R +  +   EAEQKR+A E ++R+  R
Sbjct: 601 EHKAAIARKALLARRKELLEEMATRKEREEAAARAERARAAAEAEQKRIAEEQKKREQDR 660

Query: 661 IRREIEERELEEAQALLQEAEKRVGKKKGSRKPV-LDSEKLTKQTLMQLALTEQLRERQE 720
           + +E+E   +EEA+ + +  ++R G K    +   LD++KL +  + Q+      +E++E
Sbjct: 661 LNKEVEAVRIEEAKKMAKSLQERGGLKLSEEELANLDTDKLVQMQVEQIE-----KEKKE 720

Query: 721 MEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIHERDQQLEVELSKQRHEGD 780
           + ++L+ + + MD+LERA R E A L+ A ++++  E+   H+  +   ++ SK +H  D
Sbjct: 721 LAERLRLIHRRMDHLERAYRREEAPLLSADYERQKQEDLQYHKAARITLLQTSKDKHAAD 780

Query: 781 LKEKNRLSRMMESKKSFQERVISLRQEEFSRRRD--------EREEHIRQIIQARKAER- 840
           L+ K RL+R++   +  +  +   R+ EF  RR         E+E   +Q+   R+ ER 
Sbjct: 781 LEIKKRLTRILPDYQQLRSIIEDKRRGEFEERRRKATEQIELEKERRRQQVRDERRRERQ 840

Query: 841 ---EAQRKKIFYVR------REEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 900
              EA+R+++   +       EEER+   R  EEA++ E   +++ E  ER+AK    A+
Sbjct: 841 EAEEAERRRVQEEQEARARAEEEERLAEQRRVEEAQRAELEAKKRAEIEERRAKFQATAD 900

Query: 901 KQRQRERELEEKERLR----------------------------------KESLFGSARS 939
           KQRQRE E E   R R                                  +  +FG+AR+
Sbjct: 901 KQRQREEEAEANRRSRAAGTGAAPAQELAAADATWRRASGSPAPTQAESQRPPIFGAART 960

[Close]

BLAST of CSPI01G24900 vs. ExPASy TrEMBL
Match: A0A1S3BCP4 (Eukaryotic translation initiation factor 3 subunit A OS=Cucumis melo OX=3656 GN=LOC103488448 PE=3 SV=1)

HSP 1 Score: 1713.4 bits (4436), Expect = 0.0e+00
Identity = 947/971 (97.53%), Postives = 958/971 (98.66%), Query Frame = 0


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360
           FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF
Sbjct: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420
           SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHE FHLDLATKLQPLLNK
Sbjct: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHESFHLDLATKLQPLLNK 420

Query: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480
           VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS
Sbjct: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480

Query: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540
           AVEKISVDAVKQNFIGMK+DHSRNIVLFGNLGIESDGLRDHLTV AESLNKARAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFIGMKIDHSRNIVLFGNLGIESDGLRDHLTVLAESLNKARAMIYPPV 540

Query: 541 LKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600
           LKASKTGD+LPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT
Sbjct: 541 LKASKTGDLLPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600

Query: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLAAEYEQRKNQR+RRE+EERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT
Sbjct: 601 EEAEQKRLAAEYEQRKNQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720
           KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780
           ERDQQLEVELSKQRHEGDLKEKNRLSRM+ESKK FQERVISLRQEEFSRRR EREEHI+Q
Sbjct: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMLESKKIFQERVISLRQEEFSRRRAEREEHIKQ 780

Query: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840
           IIQARKAEREA+RKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE
Sbjct: 781 IIQARKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840

Query: 841 KQRQRERELEEKERLRKESLFG-SARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAAT 900
           KQRQRERELEEKERLRKESLFG SARSGDAPARPDVAPSS+PL+PGTAAP  AAAAAAAT
Sbjct: 841 KQRQRERELEEKERLRKESLFGSSARSGDAPARPDVAPSSRPLDPGTAAP--AAAAAAAT 900

Query: 901 SPAKYVPRFRRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSRSAFGSSRPSWSS 960
           SPAKYVP+FRR E S PDAPP +SGRWG SRPD RPSRPDSWRNDDSRSAFGSSRPSWSS
Sbjct: 901 SPAKYVPKFRRNEGSTPDAPPSESGRWGSSRPD-RPSRPDSWRNDDSRSAFGSSRPSWSS 960

Query: 961 SRAPARASTDR 971
           SRAPARASTDR
Sbjct: 961 SRAPARASTDR 968

[Close]

BLAST of CSPI01G24900 vs. ExPASy TrEMBL
Match: A0A5A7V982 (Eukaryotic translation initiation factor 3 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00320 PE=3 SV=1)

HSP 1 Score: 1713.4 bits (4436), Expect = 0.0e+00
Identity = 947/971 (97.53%), Postives = 958/971 (98.66%), Query Frame = 0


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360
           FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF
Sbjct: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420
           SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHE FHLDLATKLQPLLNK
Sbjct: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHESFHLDLATKLQPLLNK 420

Query: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480
           VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS
Sbjct: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480

Query: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540
           AVEKISVDAVKQNFIGMK+DHSRNIVLFGNLGIESDGLRDHLTV AESLNKARAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFIGMKIDHSRNIVLFGNLGIESDGLRDHLTVLAESLNKARAMIYPPV 540

Query: 541 LKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600
           LKASKTGD+LPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT
Sbjct: 541 LKASKTGDLLPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600

Query: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLAAEYEQRKNQR+RRE+EERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT
Sbjct: 601 EEAEQKRLAAEYEQRKNQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720
           KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780
           ERDQQLEVELSKQRHEGDLKEKNRLSRM+ESKK FQERVISLRQEEFSRRR EREEHI+Q
Sbjct: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMLESKKIFQERVISLRQEEFSRRRAEREEHIKQ 780

Query: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840
           IIQARKAEREA+RKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE
Sbjct: 781 IIQARKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840

Query: 841 KQRQRERELEEKERLRKESLFG-SARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAAT 900
           KQRQRERELEEKERLRKESLFG SARSGDAPARPDVAPSS+PL+PGTAAP  AAAAAAAT
Sbjct: 841 KQRQRERELEEKERLRKESLFGSSARSGDAPARPDVAPSSRPLDPGTAAP--AAAAAAAT 900

Query: 901 SPAKYVPRFRRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSRSAFGSSRPSWSS 960
           SPAKYVP+FRR E S PDAPP +SGRWG SRPD RPSRPDSWRNDDSRSAFGSSRPSWSS
Sbjct: 901 SPAKYVPKFRRNEGSTPDAPPSESGRWGSSRPD-RPSRPDSWRNDDSRSAFGSSRPSWSS 960

Query: 961 SRAPARASTDR 971
           SRAPARASTDR
Sbjct: 961 SRAPARASTDR 968

[Close]

BLAST of CSPI01G24900 vs. ExPASy TrEMBL
Match: A0A0A0LVH6 (Eukaryotic translation initiation factor 3 subunit A OS=Cucumis sativus OX=3659 GN=Csa_1G537630 PE=3 SV=1)

HSP 1 Score: 1671.8 bits (4328), Expect = 0.0e+00
Identity = 922/970 (95.05%), Postives = 922/970 (95.05%), Query Frame = 0


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360
           FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF
Sbjct: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420
           SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK
Sbjct: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420

Query: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480
           VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS
Sbjct: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480

Query: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540
           AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540

Query: 541 LKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600
           LKASKT DILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT
Sbjct: 541 LKASKTSDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600

Query: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT
Sbjct: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720
           KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780
           ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ
Sbjct: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780

Query: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840
           IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKRE                     
Sbjct: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKRE--------------------- 840

Query: 841 KQRQRERELEEKERLRKESLFGSARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAATS 900
                                     GDAPARPDVAPSSQPLEPGTAAPAAAAAAAAATS
Sbjct: 841 --------------------------GDAPARPDVAPSSQPLEPGTAAPAAAAAAAAATS 900

Query: 901 PAKYVPRFRRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSRSAFGSSRPSWSSS 960
           PAKYVPRFRRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSRSAFGSSRPSWSSS
Sbjct: 901 PAKYVPRFRRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSRSAFGSSRPSWSSS 923

Query: 961 RAPARASTDR 971
           RAPARASTDR
Sbjct: 961 RAPARASTDR 923

[Close]

BLAST of CSPI01G24900 vs. ExPASy TrEMBL
Match: A0A5D3C2V2 (Eukaryotic translation initiation factor 3 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00380 PE=3 SV=1)

HSP 1 Score: 1659.4 bits (4296), Expect = 0.0e+00
Identity = 919/971 (94.64%), Postives = 938/971 (96.60%), Query Frame = 0


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           M SFVKPENALKRAEELINVGQKQDALQALHDLITSK+YRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MTSFVKPENALKRAEELINVGQKQDALQALHDLITSKRYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHF+HLSTEKAEQAR+QAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFLHLSTEKAEQARSQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVL+ILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAW KL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWFKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360
           FS+QKSFNKNLSQKDLQLIASSV+LAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF
Sbjct: 301 FSIQKSFNKNLSQKDLQLIASSVILAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420
           SLDSKLESRDVLSR NL SELVSKGVLSC  QEVKDLYHLLEHEFF LDLATKLQPLLNK
Sbjct: 361 SLDSKLESRDVLSRANLLSELVSKGVLSCTIQEVKDLYHLLEHEFFPLDLATKLQPLLNK 420

Query: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480
           +SKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS
Sbjct: 421 ISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480

Query: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540
           AVEKISVDAVKQNFI MKVDHSRNIVLFGNLGIESDGLRDHLTV AESLN ARAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFIAMKVDHSRNIVLFGNLGIESDGLRDHLTVLAESLNNARAMIYPPV 540

Query: 541 LKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600
            KASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEE ERQLLEMEREEESRRLKL KIT
Sbjct: 541 GKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEELERQLLEMEREEESRRLKLLKIT 600

Query: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLAAEYEQRKNQR+RREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKL+
Sbjct: 601 EEAEQKRLAAEYEQRKNQRLRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLS 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720
           KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAA LIE  FQQRLLEERMIH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEEEFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780
           ER+QQLEVELSKQRHEGDLKEKNR++RM+ESKKSFQERVISLRQEEFSRRR EREEHIRQ
Sbjct: 721 ERNQQLEVELSKQRHEGDLKEKNRMARMLESKKSFQERVISLRQEEFSRRRTEREEHIRQ 780

Query: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840
           IIQARKAEREA+RKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE
Sbjct: 781 IIQARKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840

Query: 841 KQRQRERELEEKERLRKESLFG-SARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAAT 900
           KQRQRERELEEKERLRKESLFG SARSGDAPARPDVAPSS+PL+P TAAP     AAAAT
Sbjct: 841 KQRQRERELEEKERLRKESLFGSSARSGDAPARPDVAPSSRPLDPRTAAP-----AAAAT 900

Query: 901 SPAKYVPRFRRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSRSAFGSSRPSWSS 960
           SPAKYVP+FRR E S PDAP  +SGRWG SRPDNRPSRPDSWRNDDSRSAFGSSRPSWSS
Sbjct: 901 SPAKYVPKFRRNEGSTPDAPLSESGRWGSSRPDNRPSRPDSWRNDDSRSAFGSSRPSWSS 960

Query: 961 SRAPARASTDR 971
           SR   R+STDR
Sbjct: 961 SR--VRSSTDR 964

[Close]

BLAST of CSPI01G24900 vs. ExPASy TrEMBL
Match: A0A5A7VE35 (Eukaryotic translation initiation factor 3 subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1290G00740 PE=3 SV=1)

HSP 1 Score: 1652.5 bits (4278), Expect = 0.0e+00
Identity = 912/961 (94.90%), Postives = 931/961 (96.88%), Query Frame = 0


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           M SFVKPENALKRAEELINVGQKQDALQALHDLITSK+YRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MTSFVKPENALKRAEELINVGQKQDALQALHDLITSKRYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHF+HLSTEKAEQAR+QAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFLHLSTEKAEQARSQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVL+ILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAW KL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWFKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360
           FS+QKSFNKNLSQKDLQLIASSV+LAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF
Sbjct: 301 FSIQKSFNKNLSQKDLQLIASSVILAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420
           SLDSKLESRDVLSR NL SELVSKGVLSC  QEVKDLYHLLEHEFF LDLATKLQPLLNK
Sbjct: 361 SLDSKLESRDVLSRANLLSELVSKGVLSCTIQEVKDLYHLLEHEFFPLDLATKLQPLLNK 420

Query: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480
           +SKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS
Sbjct: 421 ISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480

Query: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540
           AVEKISVDAVKQNFI MKVDHSRNIVLFGNLGIESDGLRDHLTV AESLN ARAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFIAMKVDHSRNIVLFGNLGIESDGLRDHLTVLAESLNNARAMIYPPV 540

Query: 541 LKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600
            KASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEE ERQLLEMEREEESRRLKL KIT
Sbjct: 541 GKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEELERQLLEMEREEESRRLKLLKIT 600

Query: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLAAEYEQRKNQR+RREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKL+
Sbjct: 601 EEAEQKRLAAEYEQRKNQRLRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLS 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720
           KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAA LIE  FQQRLLEERMIH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEEEFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780
           ER+QQLEVELSKQRHEGDLKEKNR++RM+ESKKSFQERVISLRQEEFSRRR EREEHIRQ
Sbjct: 721 ERNQQLEVELSKQRHEGDLKEKNRMARMLESKKSFQERVISLRQEEFSRRRTEREEHIRQ 780

Query: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840
           IIQARKAEREA+RKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE
Sbjct: 781 IIQARKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840

Query: 841 KQRQRERELEEKERLRKESLFG-SARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAAT 900
           KQRQRERELEEKERLRKESLFG SARSGDAPARPDVAPSS+PL+P TAAP     AAAAT
Sbjct: 841 KQRQRERELEEKERLRKESLFGSSARSGDAPARPDVAPSSRPLDPRTAAP-----AAAAT 900

Query: 901 SPAKYVPRFRRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSRSAFGSSRPSWSS 960
           SPAKYVP+FRR E S PDAP  +SGRWG SRPDNRPSRPDSWRNDDSRSAFGSSRPSWSS
Sbjct: 901 SPAKYVPKFRRNEGSTPDAPLSESGRWGSSRPDNRPSRPDSWRNDDSRSAFGSSRPSWSS 956

[Close]

BLAST of CSPI01G24900 vs. NCBI nr
Match: XP_011659071.2 (LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit A [Cucumis sativus])

HSP 1 Score: 1755.0 bits (4544), Expect = 0.0e+00
Identity = 967/972 (99.49%), Postives = 968/972 (99.59%), Query Frame = 0


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360
           FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF
Sbjct: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420
           SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK
Sbjct: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420

Query: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480
           VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS
Sbjct: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480

Query: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540
           AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540

Query: 541 LKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600
           LKASKT DILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT
Sbjct: 541 LKASKTSDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600

Query: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT
Sbjct: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720
           KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780
           ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ
Sbjct: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780

Query: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKK--EEAERKAKLDEI 840
           IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKK  + AERKAKLDEI
Sbjct: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKKLKTAERKAKLDEI 840

Query: 841 AEKQRQRERELEEKERLRKESLFGSARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAA 900
           AEKQRQRERELEEKERLRKESLFGSARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAA
Sbjct: 841 AEKQRQRERELEEKERLRKESLFGSARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAA 900

Query: 901 TSPAKYVPRFRRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSRSAFGSSRPSWS 960
           TSPAKYVPRFRRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSRSAFGSSRPSWS
Sbjct: 901 TSPAKYVPRFRRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSRSAFGSSRPSWS 960

Query: 961 SSRAPARASTDR 971
           SSRAPARASTDR
Sbjct: 961 SSRAPARASTDR 972

[Close]

BLAST of CSPI01G24900 vs. NCBI nr
Match: XP_008445419.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit A-like [Cucumis melo] >XP_008445428.1 PREDICTED: eukaryotic translation initiation factor 3 subunit A-like [Cucumis melo] >KAA0063774.1 eukaryotic translation initiation factor 3 subunit A-like [Cucumis melo var. makuwa] >TYK05526.1 eukaryotic translation initiation factor 3 subunit A-like [Cucumis melo var. makuwa])

HSP 1 Score: 1713.4 bits (4436), Expect = 0.0e+00
Identity = 947/971 (97.53%), Postives = 958/971 (98.66%), Query Frame = 0


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360
           FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF
Sbjct: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420
           SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHE FHLDLATKLQPLLNK
Sbjct: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHESFHLDLATKLQPLLNK 420

Query: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480
           VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS
Sbjct: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480

Query: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540
           AVEKISVDAVKQNFIGMK+DHSRNIVLFGNLGIESDGLRDHLTV AESLNKARAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFIGMKIDHSRNIVLFGNLGIESDGLRDHLTVLAESLNKARAMIYPPV 540

Query: 541 LKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600
           LKASKTGD+LPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT
Sbjct: 541 LKASKTGDLLPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600

Query: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLAAEYEQRKNQR+RRE+EERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT
Sbjct: 601 EEAEQKRLAAEYEQRKNQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720
           KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780
           ERDQQLEVELSKQRHEGDLKEKNRLSRM+ESKK FQERVISLRQEEFSRRR EREEHI+Q
Sbjct: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMLESKKIFQERVISLRQEEFSRRRAEREEHIKQ 780

Query: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840
           IIQARKAEREA+RKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE
Sbjct: 781 IIQARKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840

Query: 841 KQRQRERELEEKERLRKESLFG-SARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAAT 900
           KQRQRERELEEKERLRKESLFG SARSGDAPARPDVAPSS+PL+PGTAAP  AAAAAAAT
Sbjct: 841 KQRQRERELEEKERLRKESLFGSSARSGDAPARPDVAPSSRPLDPGTAAP--AAAAAAAT 900

Query: 901 SPAKYVPRFRRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSRSAFGSSRPSWSS 960
           SPAKYVP+FRR E S PDAPP +SGRWG SRPD RPSRPDSWRNDDSRSAFGSSRPSWSS
Sbjct: 901 SPAKYVPKFRRNEGSTPDAPPSESGRWGSSRPD-RPSRPDSWRNDDSRSAFGSSRPSWSS 960

Query: 961 SRAPARASTDR 971
           SRAPARASTDR
Sbjct: 961 SRAPARASTDR 968

[Close]

BLAST of CSPI01G24900 vs. NCBI nr
Match: XP_011659077.2 (eukaryotic translation initiation factor 3 subunit A [Cucumis sativus] >XP_031745800.1 eukaryotic translation initiation factor 3 subunit A [Cucumis sativus] >KAE8653309.1 hypothetical protein Csa_023339 [Cucumis sativus])

HSP 1 Score: 1671.4 bits (4327), Expect = 0.0e+00
Identity = 922/972 (94.86%), Postives = 947/972 (97.43%), Query Frame = 0


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           M SFVKPENALKRAEELINVGQKQDALQALHDLITSK+YRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MTSFVKPENALKRAEELINVGQKQDALQALHDLITSKRYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHF+HLSTEKAEQAR+QAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFLHLSTEKAEQARSQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVL+ILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATEL+LWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISD+NLYHA+AWLKL
Sbjct: 241 ATELKLWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDNNLYHAHAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360
           FS+QKSFNKNLSQKDLQLIASSV+LAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF
Sbjct: 301 FSIQKSFNKNLSQKDLQLIASSVILAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420
           SLDSKLESRDVLSR NL SELVSKGVLSC  QEVKDLYHLLEHEFF LDLATKLQPLLNK
Sbjct: 361 SLDSKLESRDVLSRANLLSELVSKGVLSCTIQEVKDLYHLLEHEFFPLDLATKLQPLLNK 420

Query: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480
           +SKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIP+FDFS
Sbjct: 421 ISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPYFDFS 480

Query: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540
           AVEKISVDAVKQNF+ MKVDHSRNIVLFGNLGIESDGLRDHLTV AESLNKARAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFVAMKVDHSRNIVLFGNLGIESDGLRDHLTVLAESLNKARAMIYPPV 540

Query: 541 LKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600
            KASKT DILPDLADIVDKEHKRLLARKSIIEKRKEE ERQLLEMEREEES+RLKL KIT
Sbjct: 541 GKASKTSDILPDLADIVDKEHKRLLARKSIIEKRKEELERQLLEMEREEESKRLKLLKIT 600

Query: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLAAEYEQRKNQR+RREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKL+
Sbjct: 601 EEAEQKRLAAEYEQRKNQRLRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLS 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720
           KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAA LIEA FQQRLLEERMIH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAEFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780
           ER+QQLEVELSK RHEGDLKEKNR++RM+ESKKSFQERVISLRQ+EFSRRR EREEHIRQ
Sbjct: 721 ERNQQLEVELSKHRHEGDLKEKNRMARMLESKKSFQERVISLRQDEFSRRRAEREEHIRQ 780

Query: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840
           IIQARKAEREAQRKKIFYVRREEERIRIL EEEEARKREEAERRKKEEAERKAKLDEIAE
Sbjct: 781 IIQARKAEREAQRKKIFYVRREEERIRILCEEEEARKREEAERRKKEEAERKAKLDEIAE 840

Query: 841 KQRQRERELEEKERLRKESLFGSARSGDAPARPDVAPSSQPLEPGTAAP--AAAAAAAAA 900
           KQRQRERELEEKERLRKESLFGSARSGDAPARPDVAPSS+PLEP TAAP  AAAAAAAAA
Sbjct: 841 KQRQRERELEEKERLRKESLFGSARSGDAPARPDVAPSSRPLEPVTAAPAAAAAAAAAAA 900

Query: 901 TSPAKYVPRFRRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSRSAFGSSRPSWS 960
           TSPAKYVP+FRR+EASNPDAPPP+SGRWG SRPDNRPSRPDSWRNDDSRS FGSSRPSWS
Sbjct: 901 TSPAKYVPKFRRSEASNPDAPPPESGRWGSSRPDNRPSRPDSWRNDDSRSGFGSSRPSWS 960

Query: 961 SSRAPARASTDR 971
           SSR   R+STDR
Sbjct: 961 SSR--VRSSTDR 970

[Close]

BLAST of CSPI01G24900 vs. NCBI nr
Match: TYK05532.1 (eukaryotic translation initiation factor 3 subunit A-like [Cucumis melo var. makuwa])

HSP 1 Score: 1659.4 bits (4296), Expect = 0.0e+00
Identity = 919/971 (94.64%), Postives = 938/971 (96.60%), Query Frame = 0


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           M SFVKPENALKRAEELINVGQKQDALQALHDLITSK+YRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MTSFVKPENALKRAEELINVGQKQDALQALHDLITSKRYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHF+HLSTEKAEQAR+QAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFLHLSTEKAEQARSQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVL+ILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAW KL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWFKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360
           FS+QKSFNKNLSQKDLQLIASSV+LAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF
Sbjct: 301 FSIQKSFNKNLSQKDLQLIASSVILAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420
           SLDSKLESRDVLSR NL SELVSKGVLSC  QEVKDLYHLLEHEFF LDLATKLQPLLNK
Sbjct: 361 SLDSKLESRDVLSRANLLSELVSKGVLSCTIQEVKDLYHLLEHEFFPLDLATKLQPLLNK 420

Query: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480
           +SKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS
Sbjct: 421 ISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480

Query: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540
           AVEKISVDAVKQNFI MKVDHSRNIVLFGNLGIESDGLRDHLTV AESLN ARAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFIAMKVDHSRNIVLFGNLGIESDGLRDHLTVLAESLNNARAMIYPPV 540

Query: 541 LKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600
            KASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEE ERQLLEMEREEESRRLKL KIT
Sbjct: 541 GKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEELERQLLEMEREEESRRLKLLKIT 600

Query: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLAAEYEQRKNQR+RREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKL+
Sbjct: 601 EEAEQKRLAAEYEQRKNQRLRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLS 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720
           KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAA LIE  FQQRLLEERMIH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEEEFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780
           ER+QQLEVELSKQRHEGDLKEKNR++RM+ESKKSFQERVISLRQEEFSRRR EREEHIRQ
Sbjct: 721 ERNQQLEVELSKQRHEGDLKEKNRMARMLESKKSFQERVISLRQEEFSRRRTEREEHIRQ 780

Query: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840
           IIQARKAEREA+RKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE
Sbjct: 781 IIQARKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840

Query: 841 KQRQRERELEEKERLRKESLFG-SARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAAT 900
           KQRQRERELEEKERLRKESLFG SARSGDAPARPDVAPSS+PL+P TAAP     AAAAT
Sbjct: 841 KQRQRERELEEKERLRKESLFGSSARSGDAPARPDVAPSSRPLDPRTAAP-----AAAAT 900

Query: 901 SPAKYVPRFRRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSRSAFGSSRPSWSS 960
           SPAKYVP+FRR E S PDAP  +SGRWG SRPDNRPSRPDSWRNDDSRSAFGSSRPSWSS
Sbjct: 901 SPAKYVPKFRRNEGSTPDAPLSESGRWGSSRPDNRPSRPDSWRNDDSRSAFGSSRPSWSS 960

Query: 961 SRAPARASTDR 971
           SR   R+STDR
Sbjct: 961 SR--VRSSTDR 964

[Close]

BLAST of CSPI01G24900 vs. NCBI nr
Match: XP_038894202.1 (eukaryotic translation initiation factor 3 subunit A-like [Benincasa hispida])

HSP 1 Score: 1653.6 bits (4281), Expect = 0.0e+00
Identity = 919/972 (94.55%), Postives = 934/972 (96.09%), Query Frame = 0


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM
Sbjct: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120
           RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE
Sbjct: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180
           ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV
Sbjct: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL
Sbjct: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360
           FSLQKSFNKNLSQKDLQLIASSVLLAALAV PYDSKHGASHLELEHEKERNLRMANLIGF
Sbjct: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVPPYDSKHGASHLELEHEKERNLRMANLIGF 360

Query: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420
           +LDSKLESRDVLSR NLFSELVSKGVLSCATQEVKDLYHLLEHEFF LDLATKLQPLLNK
Sbjct: 361 NLDSKLESRDVLSRANLFSELVSKGVLSCATQEVKDLYHLLEHEFFPLDLATKLQPLLNK 420

Query: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480
           +SKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS
Sbjct: 421 ISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480

Query: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540
           AVEKISVDAVKQNFI MKVDHSRNIVLFGNLGIES+GL+DHLTV AESLNKARAMIYPPV
Sbjct: 481 AVEKISVDAVKQNFIAMKVDHSRNIVLFGNLGIESEGLQDHLTVLAESLNKARAMIYPPV 540

Query: 541 LKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600
           +KASKTG+ILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKL KIT
Sbjct: 541 MKASKTGNILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKIT 600

Query: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLAAEYEQRK QR+RRE+EERELEEAQALL EAEKRVGKKKGSRKPVLDSEKLT
Sbjct: 601 EEAEQKRLAAEYEQRKTQRLRREMEERELEEAQALLLEAEKRVGKKKGSRKPVLDSEKLT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720
           KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH
Sbjct: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780
           ERDQQLEVELSKQRHEGDLKEKNRLSRM+ESKK FQERVISLRQEEF RRR EREE IRQ
Sbjct: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMLESKKIFQERVISLRQEEFGRRRAEREEQIRQ 780

Query: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840
           IIQARKAEREA+RKKIFYVR EEERIRILREEEEARKREEAERRKKEEAERKAKLD IAE
Sbjct: 781 IIQARKAEREAKRKKIFYVRHEEERIRILREEEEARKREEAERRKKEEAERKAKLDAIAE 840

Query: 841 KQRQRERELEEKERLRKESLFGSARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAAT- 900
           KQ QRERELEEKERLRKESLFG  RS DAPA    AP+S+PLE GTAAPAAAAAAAAA  
Sbjct: 841 KQMQRERELEEKERLRKESLFGGGRSADAPA----APASRPLESGTAAPAAAAAAAAAAA 900

Query: 901 -SPAKYVPRFRRTEASNPDAPPPDSGRWGGSRPDNRPSRPDSWRNDDSRSAFGSSRPSWS 960
            SP KYVPRFRRTE S   APPP+S RWG SRPDNRPS+PDSWR+DD R AFGSSR SWS
Sbjct: 901 PSPGKYVPRFRRTEGSTTTAPPPESDRWGSSRPDNRPSQPDSWRSDDRRPAFGSSRSSWS 960

Query: 961 SSRAPARASTDR 971
           SSR P RASTDR
Sbjct: 961 SSRIPTRASTDR 968

[Close]

BLAST of CSPI01G24900 vs. TAIR 10
Match: AT4G11420.1 (eukaryotic translation initiation factor 3A )

HSP 1 Score: 1276.9 bits (3303), Expect = 0.0e+00
Identity = 727/990 (73.43%), Postives = 832/990 (84.04%), Query Frame = 0


Query: 1   MASFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDM 60
           MA+F KPENALKRA+ELINVGQKQDALQALHDLITSK+YRAWQKPLE+IMFKY++LCVD+
Sbjct: 1   MANFAKPENALKRADELINVGQKQDALQALHDLITSKRYRAWQKPLEKIMFKYLDLCVDL 60

Query: 61  RKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARTQAQALEEALDVDDLE 120
           ++GRFAKDGLIQYRIVCQQVNV+SLEEVIKHF+HL+T+KAEQAR+QA ALEEALDVDDLE
Sbjct: 61  KRGRFAKDGLIQYRIVCQQVNVSSLEEVIKHFLHLATDKAEQARSQADALEEALDVDDLE 120

Query: 121 ADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLDILRNNSKLEALYAMTAH 180
           AD++PEDL LS VSGEKGKDRSDRELVTPWFKFLWETYRTVL+ILRNNSKLEALYAMTAH
Sbjct: 121 ADRKPEDLQLSIVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKV 240
           +AFQFCK YKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRF+QLKV
Sbjct: 181 KAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFDQLKV 240

Query: 241 ATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKL 300
           ATEL LWQEAFRSVEDI+GLMCMVKKTPK SL++VYY KLTEIFWIS S+LYHAYAW KL
Sbjct: 241 ATELGLWQEAFRSVEDIYGLMCMVKKTPKSSLLMVYYSKLTEIFWISSSHLYHAYAWFKL 300

Query: 301 FSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGF 360
           FSLQK+FNKNLSQKDLQLIASSV+LAAL++ P+D    ASH+ELE+EKERNLRMANLIGF
Sbjct: 301 FSLQKNFNKNLSQKDLQLIASSVVLAALSIPPFDRAQSASHMELENEKERNLRMANLIGF 360

Query: 361 SLDSKLESRDVLSRENLFSELVSKGVLSCATQEVKDLYHLLEHEFFHLDLATKLQPLLNK 420
           +L+ K E +D+LSR  L SELVSKGVLSCA+QEVKDL+H+LEHEF  LDL +K+QPLL K
Sbjct: 361 NLEPKFEGKDMLSRSALLSELVSKGVLSCASQEVKDLFHVLEHEFHPLDLGSKIQPLLEK 420

Query: 421 VSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFS 480
           +SK GGKLSSA S+PEVQLSQYVP+LEKLATLRLLQQVSK+YQT++IESLSQ++PFF FS
Sbjct: 421 ISKSGGKLSSAPSLPEVQLSQYVPSLEKLATLRLLQQVSKIYQTIRIESLSQLVPFFQFS 480

Query: 481 AVEKISVDAVKQNFIGMKVDHSRNIVLFGNLGIESDGLRDHLTVFAESLNKARAMIYPPV 540
            VEKISVDAVK NF+ MKVDH + +V+FGNLGIESDGLRDHL VFAESL+K RAM+YP  
Sbjct: 481 EVEKISVDAVKNNFVAMKVDHMKGVVIFGNLGIESDGLRDHLAVFAESLSKVRAMLYPVP 540

Query: 541 LKASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLQKIT 600
            KASK   ++P+LAD V+KEHKRLLARKSIIEKRKE+QERQ LEMEREEE +RLKLQK+T
Sbjct: 541 SKASKLAGVIPNLADTVEKEHKRLLARKSIIEKRKEDQERQQLEMEREEEQKRLKLQKLT 600

Query: 601 EEAEQKRLAAEYEQRKNQRIRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLT 660
           EEAEQKRLAAE  +R+ QRI REIEE+ELEEAQALL+E EKR+  KKG +KP+LD EK+T
Sbjct: 601 EEAEQKRLAAELAERRKQRILREIEEKELEEAQALLEETEKRM--KKGKKKPLLDGEKVT 660

Query: 661 KQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIH 720
           KQ++ + ALTEQL+ERQEMEKKLQKLAKTMDYLERAKREEAA LIEAA+Q+RL+EER  +
Sbjct: 661 KQSVKERALTEQLKERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQRRLVEEREFY 720

Query: 721 ERDQQLEVELSKQRHEGDLKEKNRLSRMMESKKSFQERVISLRQEEFSRRRDEREEHIRQ 780
           ER+QQ EVELSK+RHE DLKEKNRLSRM+ +K+ FQ +VIS RQ EF R R EREE I +
Sbjct: 721 EREQQREVELSKERHESDLKEKNRLSRMLGNKEIFQAQVISRRQAEFDRIRTEREERISK 780

Query: 781 IIQARKAEREAQRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAE 840
           II+ +K ER+ +RK+I+Y++ EEERIR L+EEEEARK+EEAER KK EAERKA LD+  E
Sbjct: 781 IIREKKQERDIKRKQIYYLKIEEERIRKLQEEEEARKQEEAERLKKVEAERKANLDKAFE 840

Query: 841 KQRQRERELEEKERLRKESLFGSARSGDAPARPDVAPSSQPLEPGTAAPAAAAAAAAATS 900
           KQRQRE ELEEK R  +E L    R  +AP      P+  P+  GT APAAAAAAA A +
Sbjct: 841 KQRQREIELEEKSRREREELL---RGTNAPPARLAEPTVTPV--GTTAPAAAAAAAGAPA 900

Query: 901 PAKYVPRFRR--TEASNPDA-------------PPPDSGRWGGSR----------PDNRP 956
            A YVP+++R  TE S P A             PPP    WG +R           +   
Sbjct: 901 -APYVPKWKRQTTEVSGPSAPTSSETDRRSNRGPPPGDDHWGSNRGAAQNTDRWTSNRER 960

[Close]

BLAST of CSPI01G24900 vs. TAIR 10
Match: AT4G23330.1 (BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1); Has 63 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 8.3e-07
Identity = 45/92 (48.91%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 683 LQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIHERDQQLEVELSKQRHEGDLKEK 742
           L++ A  +D  E  K+ E        +QQRLLEER I+E +QQ EVE    R + DLKEK
Sbjct: 181 LEEEALDVDDFEADKKPEDLQ-PSVVYQQRLLEERKIYENEQQREVE----RLKSDLKEK 240

Query: 743 NRLSRMMESKKSFQERVISLRQEEFSRRRDER 775
            RL+RM+++K+ F  RVI LRQ EF R R ER
Sbjct: 241 KRLARMLDNKEIF--RVIRLRQPEFERLRSER 265

The following BLAST results are available for this feature:

BLAST of CSPI01G24900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LD55	0.0e+00	73.43	Eukaryotic translation initiation factor 3 subunit A OS=Arabidopsis thaliana OX=...	[more]
Q40554	0.0e+00	74.22	Eukaryotic translation initiation factor 3 subunit A OS=Nicotiana tabacum OX=409...	[more]
Q9XHR2	0.0e+00	68.17	Eukaryotic translation initiation factor 3 subunit A OS=Zea mays OX=4577 GN=TIF3...	[more]
Q6PCR7	8.3e-137	37.67	Eukaryotic translation initiation factor 3 subunit A OS=Danio rerio OX=7955 GN=e...	[more]
Q4P358	1.8e-131	34.95	Eukaryotic translation initiation factor 3 subunit A OS=Ustilago maydis (strain ...	[more]

BLAST of CSPI01G24900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BCP4	0.0e+00	97.53	Eukaryotic translation initiation factor 3 subunit A OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7V982	0.0e+00	97.53	Eukaryotic translation initiation factor 3 subunit A OS=Cucumis melo var. makuwa...	[more]
A0A0A0LVH6	0.0e+00	95.05	Eukaryotic translation initiation factor 3 subunit A OS=Cucumis sativus OX=3659 ...	[more]
A0A5D3C2V2	0.0e+00	94.64	Eukaryotic translation initiation factor 3 subunit A OS=Cucumis melo var. makuwa...	[more]
A0A5A7VE35	0.0e+00	94.90	Eukaryotic translation initiation factor 3 subunit A OS=Cucumis melo var. makuwa...	[more]

BLAST of CSPI01G24900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659071.2	0.0e+00	99.49	LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit A [Cucum...	[more]
XP_008445419.1	0.0e+00	97.53	PREDICTED: eukaryotic translation initiation factor 3 subunit A-like [Cucumis me...	[more]
XP_011659077.2	0.0e+00	94.86	eukaryotic translation initiation factor 3 subunit A [Cucumis sativus] >XP_03174...	[more]
TYK05532.1	0.0e+00	94.64	eukaryotic translation initiation factor 3 subunit A-like [Cucumis melo var. mak...	[more]
XP_038894202.1	0.0e+00	94.55	eukaryotic translation initiation factor 3 subunit A-like [Benincasa hispida]	[more]

BLAST of CSPI01G24900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G11420.1	0.0e+00	73.43	eukaryotic translation initiation factor 3A	[more]
AT4G23330.1	8.3e-07	48.91	BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation fa...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 610..649
None	No IPR available	COILS	Coil	Coil	coord: 561..595
None	No IPR available	COILS	Coil	Coil	coord: 93..120
None	No IPR available	COILS	Coil	Coil	coord: 774..794
None	No IPR available	COILS	Coil	Coil	coord: 799..858
None	No IPR available	COILS	Coil	Coil	coord: 669..699
None	No IPR available	SMART	SM00753	PINT	coord: 441..532 e-value: 1.9E-5 score: 34.1
None	No IPR available	GENE3D	4.10.860.10	UVR domain	coord: 217..268 e-value: 1.4E-28 score: 100.1
None	No IPR available	GENE3D	1.25.40.860		coord: 269..343 e-value: 6.4E-20 score: 73.9 coord: 363..493 e-value: 1.4E-30 score: 108.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 945..970
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 814..970
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 814..861
None	No IPR available	PANTHER	PTHR14005:SF3	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A	coord: 1..966
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 441..532 e-value: 1.9E-5 score: 34.1
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 373..509 e-value: 1.4E-19 score: 70.5
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 316..513 score: 17.129641
IPR027512	Eukaryotic translation initiation factor 3 subunit A	PANTHER	PTHR14005	EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT	coord: 1..966
IPR027512	Eukaryotic translation initiation factor 3 subunit A	HAMAP	MF_03000	eIF3a	coord: 1..945 score: 27.56596

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G24900.1	CSPI01G24900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
molecular_function	GO:0003743	translation initiation factor activity