CSPI01G24490 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G24490
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Chloroplast, nucleus, chloroplast envelope, putative
Location	Chr1: 19805868 .. 19809085 (-)
RNA-Seq Expression	CSPI01G24490
Synteny	CSPI01G24490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATTGGTGAAATTGAGCATAGTTGTGTGTTAGCCCAATTATTACTCTCTCATAACCTAAAAAGCCCATTTCTCTATCAGTCCATTGCCACCTACCGATGCTCATTATCCCTTCTTCCTTGTCCGCAACAACCTCCACCGCCACACCCCCATTTCACCGTCATTCACTCGCCGACACGCACCACTACCCACCACATTCCCTCCTCTTCCGCCCAGGTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTCTCAGTCTCTGGTTTCTAAGCCTTTTCTTTTCCTTTCTATTCTCTTTTCTTTCATCGATTCGACCAATTCGATAACTGGGTACTTTTGGAATGATCAACTGATTAAAATTACACTTGTATAGCCTCTACTTAAGCTTTTGAATTTAGGGTAGATATTACAAAAATATGGCTCTATGCGATTATGAATAGCTATTTTATCTGGTTATGTCTGGTAATTGTTATGATTCATACATGATATGAGAACTTGGATGTCAGGGTGCTGGAGTGTGGCATATGACCATAGGGTGTTTATCAAAGGATGAGCAGCATGCAGATAACTGCTACACGGAATTCTATTTGTGCCAATAAATCAATATGCCTTGTTTCTAAGTCAATATATCCATCATTCCATGCTAATCAGTCACGACGTGCTGTTGTGAATCTAAGTGCCAATGCATCTTATTTCAAGCAGGGTCTACCAGTTTTGAAGTATGAACATCGGAGGGTTGGATTAAAATATCAGCATACACCAATTGTTTCCTTATACGGTAGCAAGGGAAAGGGCAGTGATGATGGGGTGAGAGCATTTCTTAATTGTTCGTTTGTGATCATTAGATTGTCTATTCTGCTCTATTCTTCTATATGTTTCTTTCTGATATAACTATTAGTAAATTTTATTTTCTGATGCTTTGCTCTACCTAAAATACTCTGCTTGGGTTTCTTCTTTCTTCTTTCTTCTTTCTTCTTTTTCCTTTCCTTTTTTATTTTAAATTGTTATCTTTGACGTGTTAAAAGGGAAAAAAAGTTCATAATATGGTTTCTAATGTTCTCCGAATGATTGAAGGATTGGTGGAACTACGCTTCTCTGAGACTTCAGATTGTGTAACATGCTTCTTGAATTTCTCGTGTGTCATTTTCTGTTCCACTAAGCAACGGTGGATGGTCATGAAGTACATTTTAATTGCTGGAATTTTTCAAACTTGAGGAATTTAGAATGGCACTGTTAGTTCTGTTTTCCCACGAGTGTTGAATATTCATCAATATGCTTACTTTGCAAAAGTCAGCCATTGTAATCTTTTTTTTCATAAACCATTAAGGTTACTCCTTATGAAGATTGGAACATTTAACAAGAACATGTGTTTGGTTTGATATCAAGTGTCAACCATCTTTTTCACTCTTTATTTCATGAATGTTCCTCATGCTAGGAATTATTGTTGTTCATTCACTTTTCCAGAAAGTGAGCAAGTTTGTTTTCCCCCCCTAATTTCCTTTTTTGGTTCAAGTTGCTTGATATTCAATACACAATGGTAGGAGGATTTGGAGCGTTTATTCATTTAACCACTATTATGTTCATGTCCCTATTTTTGAATTTCAAATGTGCAAATGATAACCTTTGGAGTTTGACGAGTTTCTATTTGTTTAAGAGGTATCTGTTAATCTAGATATAGTAATAGTACTTTGTTTCTAGCAGGGTTCTCCATGGAAAGGTTTCGACAAAGTTGTTGAAAGTTTTAAGGGACGATCAGTAGAAGATGTCTTGCGACAACAAATTGAAAAGAAAGAGTTCTATGATGGTGGAGATGGTGGCAAAAGACCTCCAGGTGGCGGCGGCGGCAGTGGTGGTGGCGACAGCGGTGATGGTGGCGAGGATAGCTCTAGTGGATCTGAGGATTATAGTCTCACAGGAATTATGGATGAAATACTGCAAGTCATTCTGGCGACCCTCGGCTTAGTTTTCGTAGTAATATACTCATTTAACATTTTCTATTGGAAATGGCATTTCAATCAGTCTTAAAAAGTTACAACTAACCAAACAGAAAGTAGAGGAATTCACTGGTAAAAAAAGTCTCGAGTTAGCTTAATAGTACATATTTCGATGTAGGGCCTGATAACAAGGAGATTTCCTAGACTTGATATTTATAGTTAACTACTAGATCTACTGTTTTGACTCCATAAAGCATTTGATGAAGAAAATAACTGGCCTTCATATATTCAGGACTAGTAAAGTTAAACTCTAGATGTGAGCCAACAAAGTCAACCTTCACGAAATTGGATGGTAATGCTGTAAAAACCGCAACCTTTTCTCCTTTTGCTCTCTCTGTTGTCAAGTTAAGAGAAAACACAATATTCATAACTCAGAAAGCTGGAAAGGAATAAGAGTATGTACCATGAAAATCATGTTTATTTGAATACATATCTTGACATTGAATATGTACTAAATGAGGAAATTTTTTAAACATGATTGTTGGTTGTGTACTTGGGACAAGTTAATTAGTTACAAAGCTTGGCTTATGTTTTCTTGTTTGTGGTGGGCAGTACATTTATATACTCAGTGGGGAAGAGCTATCGCGATTAGCGAAGGATTACATAAAGTATCTATTTGGAGGAAGCAAGAGTGTGCGTTTGAAGCGAGCGATGTACAACTGGGGAAAGTTTTACCAAAGCCTCATGAAAAAGAAGAAATATGATCAATATTGGCTGGAGAAAGCTATTCTTAGCACTCCAACATGGTGGGATAATCCTGATAAGTATATGCCTAAGAAGGCACAGAATCAGAAACAGAATGTTGCATCAGATGATTATGATGAAACCGATTACCTAGACTCTGATTATGGTGAAATTGATTTCTAAAGTCTGATTATGGTGAAATCGATTAAGTAAAGTCTGATGATGAGGAATTCTGAATCCTTCTGCTTTTCTGTAAACCAACCTGATGTGTCTTTTTCTGCTGTCAATTTTTGTTTTCTGAGATGCTAAATTTGATATGTTATGTTGTAGGATCTTGGTGGACTGATGTACATAACATGAGATTTTGTCACTTTTTATAATTTTCTTAGTTATGTGATCTCAAAGTCTTTCTGGTGATTGGAAGCGACTTAGTCCCAATGACCATAAATCTTAGAGGCATGGGCAAGTAGTAGAGTTTGTATAGTCAAGCATGAAATTAATTTTTTTAATTGTGGAGCTCACAAATTCCTTGGCCCA

mRNA sequence

GAATTGGTGAAATTGAGCATAGTTGTGTGTTAGCCCAATTATTACTCTCTCATAACCTAAAAAGCCCATTTCTCTATCAGTCCATTGCCACCTACCGATGCTCATTATCCCTTCTTCCTTGTCCGCAACAACCTCCACCGCCACACCCCCATTTCACCGTCATTCACTCGCCGACACGCACCACTACCCACCACATTCCCTCCTCTTCCGCCCAGGGTGCTGGAGTGTGGCATATGACCATAGGGTGTTTATCAAAGGATGAGCAGCATGCAGATAACTGCTACACGGAATTCTATTTGTGCCAATAAATCAATATGCCTTGTTTCTAAGTCAATATATCCATCATTCCATGCTAATCAGTCACGACGTGCTGTTGTGAATCTAAGTGCCAATGCATCTTATTTCAAGCAGGGTCTACCAGTTTTGAAGTATGAACATCGGAGGGTTGGATTAAAATATCAGCATACACCAATTGTTTCCTTATACGGTAGCAAGGGAAAGGGCAGTGATGATGGGGGTTCTCCATGGAAAGGTTTCGACAAAGTTGTTGAAAGTTTTAAGGGACGATCAGTAGAAGATGTCTTGCGACAACAAATTGAAAAGAAAGAGTTCTATGATGGTGGAGATGGTGGCAAAAGACCTCCAGGTGGCGGCGGCGGCAGTGGTGGTGGCGACAGCGGTGATGGTGGCGAGGATAGCTCTAGTGGATCTGAGGATTATAGTCTCACAGGAATTATGGATGAAATACTGCAAGTCATTCTGGCGACCCTCGGCTTAGTTTTCGTATACATTTATATACTCAGTGGGGAAGAGCTATCGCGATTAGCGAAGGATTACATAAAGTATCTATTTGGAGGAAGCAAGAGTGTGCGTTTGAAGCGAGCGATGTACAACTGGGGAAAGTTTTACCAAAGCCTCATGAAAAAGAAGAAATATGATCAATATTGGCTGGAGAAAGCTATTCTTAGCACTCCAACATGGTGGGATAATCCTGATAAGTATATGCCTAAGAAGGCACAGAATCAGAAACAGAATGTTGCATCAGATGATTATGATGAAACCGATTACCTAGACTCTGATTATGGTGAAATTGATTTCTAAAGTCTGATTATGGTGAAATCGATTAAGTAAAGTCTGATGATGAGGAATTCTGAATCCTTCTGCTTTTCTGTAAACCAACCTGATGTGTCTTTTTCTGCTGTCAATTTTTGTTTTCTGAGATGCTAAATTTGATATGTTATGTTGTAGGATCTTGGTGGACTGATGTACATAACATGAGATTTTGTCACTTTTTATAATTTTCTTAGTTATGTGATCTCAAAGTCTTTCTGGTGATTGGAAGCGACTTAGTCCCAATGACCATAAATCTTAGAGGCATGGGCAAGTAGTAGAGTTTGTATAGTCAAGCATGAAATTAATTTTTTTAATTGTGGAGCTCACAAATTCCTTGGCCCA

Coding sequence (CDS)

ATGAGCAGCATGCAGATAACTGCTACACGGAATTCTATTTGTGCCAATAAATCAATATGCCTTGTTTCTAAGTCAATATATCCATCATTCCATGCTAATCAGTCACGACGTGCTGTTGTGAATCTAAGTGCCAATGCATCTTATTTCAAGCAGGGTCTACCAGTTTTGAAGTATGAACATCGGAGGGTTGGATTAAAATATCAGCATACACCAATTGTTTCCTTATACGGTAGCAAGGGAAAGGGCAGTGATGATGGGGGTTCTCCATGGAAAGGTTTCGACAAAGTTGTTGAAAGTTTTAAGGGACGATCAGTAGAAGATGTCTTGCGACAACAAATTGAAAAGAAAGAGTTCTATGATGGTGGAGATGGTGGCAAAAGACCTCCAGGTGGCGGCGGCGGCAGTGGTGGTGGCGACAGCGGTGATGGTGGCGAGGATAGCTCTAGTGGATCTGAGGATTATAGTCTCACAGGAATTATGGATGAAATACTGCAAGTCATTCTGGCGACCCTCGGCTTAGTTTTCGTATACATTTATATACTCAGTGGGGAAGAGCTATCGCGATTAGCGAAGGATTACATAAAGTATCTATTTGGAGGAAGCAAGAGTGTGCGTTTGAAGCGAGCGATGTACAACTGGGGAAAGTTTTACCAAAGCCTCATGAAAAAGAAGAAATATGATCAATATTGGCTGGAGAAAGCTATTCTTAGCACTCCAACATGGTGGGATAATCCTGATAAGTATATGCCTAAGAAGGCACAGAATCAGAAACAGAATGTTGCATCAGATGATTATGATGAAACCGATTACCTAGACTCTGATTATGGTGAAATTGATTTCTAA

Protein sequence

MSSMQITATRNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEHRRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESFKGRSVEDVLRQQIEKKEFYDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPTWWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF*

Homology

[Close]

BLAST of CSPI01G24490 vs. ExPASy TrEMBL
Match: A0A0A0LVP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534740 PE=4 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 2.6e-150
Identity = 278/280 (99.29%), Postives = 279/280 (99.64%), Query Frame = 0


Query: 1   MSSMQITATRNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MSSMQITAT+NSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH
Sbjct: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESFKGRSVEDVLRQQIEKKEFYD 120
           RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKG DKVVESFKGRSVEDVLRQQIEKKEFYD
Sbjct: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEKKEFYD 120

Query: 121 GGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYI 180
           GGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYI
Sbjct: 121 GGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYI 180

Query: 181 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT 240
           LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT
Sbjct: 181 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT 240

Query: 241 WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF 281
           WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF
Sbjct: 241 WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF 280

[Close]

BLAST of CSPI01G24490 vs. ExPASy TrEMBL
Match: A0A1S3BA69 (uncharacterized protein LOC103487859 OS=Cucumis melo OX=3656 GN=LOC103487859 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 4.0e-111
Identity = 214/277 (77.26%), Postives = 242/277 (87.36%), Query Frame = 0


Query: 1   MSSMQITATRNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MSSMQITAT+NSICANKSICLVSKSIYPSFHANQS RAVVNLSANASYFKQGLP+LKY+H
Sbjct: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSLRAVVNLSANASYFKQGLPILKYKH 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESF-KGRSVEDVLRQQIEKKEFY 120
           RRVGLK+QHTPIVSL+GSKGKGSDDGGSPWK FDKVVESF KG SVEDVLR+QIEKKEFY
Sbjct: 61  RRVGLKHQHTPIVSLFGSKGKGSDDGGSPWKAFDKVVESFKKGGSVEDVLRKQIEKKEFY 120

Query: 121 DGGDGGKRPP--GGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVY 180
           DGGDGG+RPP  GGGGG GGG  G G EDSSSG++D+SL   +DE LQV+LATLG +F+Y
Sbjct: 121 DGGDGGRRPPSGGGGGGGGGGGGGSGSEDSSSGAKDFSLAEALDETLQVVLATLGFIFMY 180

Query: 181 IYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILS 240
            Y+L+GEE++RL KDYIKY FGGSKSVRL+RAMY WG+FYQ L  KKKYD++WLEKAI++
Sbjct: 181 FYLLNGEEVTRLLKDYIKYRFGGSKSVRLRRAMYEWGRFYQRLTAKKKYDEFWLEKAIIN 240

Query: 241 TPTWWDNPDKYMPK-----KAQNQKQNVASDDYDETD 270
           TPTWWD+PD Y        KA+NQ++N ASDD  ETD
Sbjct: 241 TPTWWDHPDNYRHAAMAYGKAENQEKNFASDDDGETD 277

[Close]

BLAST of CSPI01G24490 vs. ExPASy TrEMBL
Match: A0A6J1CES8 (uncharacterized protein LOC111010834 OS=Momordica charantia OX=3673 GN=LOC111010834 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 5.3e-103
Identity = 204/282 (72.34%), Postives = 234/282 (82.98%), Query Frame = 0


Query: 1   MSSMQITATRNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MSSMQITAT+NSIC+++SIC+ SKSIYPSF A +SR A+VNLSANASYFKQGLPVLKY+H
Sbjct: 1   MSSMQITATQNSICSSRSICIASKSIYPSFRATRSRSALVNLSANASYFKQGLPVLKYKH 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESF-KGRSVEDVLRQQIEKKEFY 120
           RR GL +QHTPIVSL+GSKGK S DGGSPWK FDKVVE+F KGRSVEDVLRQQIEKKEFY
Sbjct: 61  RRAGLNHQHTPIVSLFGSKGKESGDGGSPWKTFDKVVENFKKGRSVEDVLRQQIEKKEFY 120

Query: 121 DGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIY 180
           DGGDGGKRPP GGGGSG         DSSSGSED SL GI+DE LQVILAT+G +F+YIY
Sbjct: 121 DGGDGGKRPPSGGGGSG---------DSSSGSEDDSLGGIIDETLQVILATIGFIFLYIY 180

Query: 181 ILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTP 240
           I+SGEEL+RLAKDYIK++FGGSKSVRLKRAMY WG+FYQ L +KK+YD+YWLEKAI++TP
Sbjct: 181 IISGEELTRLAKDYIKFVFGGSKSVRLKRAMYKWGRFYQKLTEKKQYDEYWLEKAIINTP 240

Query: 241 TWWDNPDK-------YMPKKAQNQKQNVASDDYDETDYLDSD 275
           TWWD+PDK       YM  + +NQ      +D  E D  +SD
Sbjct: 241 TWWDHPDKYRRAVMDYMESQYENQHSASNVNDDAEMDVSNSD 273

[Close]

BLAST of CSPI01G24490 vs. ExPASy TrEMBL
Match: A0A6J1K2H4 (uncharacterized protein LOC111490456 OS=Cucurbita maxima OX=3661 GN=LOC111490456 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.9e-89
Identity = 184/295 (62.37%), Postives = 227/295 (76.95%), Query Frame = 0


Query: 2   SSMQITATRNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEHR 61
           S MQITAT+NS+C NKS+CLVSKS YPSF A+Q+R A VN SAN SY K+GLPVLKY+HR
Sbjct: 3   SMMQITATQNSLCPNKSLCLVSKSSYPSFLASQTRSAFVNPSANTSYLKKGLPVLKYDHR 62

Query: 62  RVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESF-KGRSVEDVLRQQIEKKEFYD 121
           RVGLK+++TPI SL+GSKGK + DGGSPWK FDKVVE+F KGRSVED+LRQQIE K+FYD
Sbjct: 63  RVGLKHRYTPIASLFGSKGKDNGDGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDFYD 122

Query: 122 GGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYI 181
           GGDGG+ PPGGGGGS GG       DSSS SED+++ GI++E + V+LAT+GLV VYIYI
Sbjct: 123 GGDGGRTPPGGGGGSSGG-------DSSSESEDHNILGILEETMHVVLATIGLVLVYIYI 182

Query: 182 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFY-QSLMKKKKYDQYWLEKAILSTP 241
           + G+EL  LAKDYIKYLFG  +S RLK AMY+WGKFY +   KK+K D+YWLEKAIL+TP
Sbjct: 183 IEGQELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTRKKQKPDEYWLEKAILNTP 242

Query: 242 TWWDNPDKYMPK-----KAQNQKQNVA---------SDDYDETDYLDSDYGEIDF 281
           TWWD+PDKY        ++Q Q+++ A         S  YD+ +Y +S+  +  F
Sbjct: 243 TWWDHPDKYRYAIMEYLESQRQQESPAASSSSSSSSSSSYDDEEYEESNSDDEQF 290

[Close]

BLAST of CSPI01G24490 vs. ExPASy TrEMBL
Match: A0A6J1GSZ4 (uncharacterized protein LOC111457207 OS=Cucurbita moschata OX=3662 GN=LOC111457207 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 4.3e-89
Identity = 177/249 (71.08%), Postives = 206/249 (82.73%), Query Frame = 0


Query: 2   SSMQITATRNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEHR 61
           S MQITAT+NS+C NKSICLVSKS YPSF A+Q+R A VN SANASY K+GLPVLKY+HR
Sbjct: 3   SMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYDHR 62

Query: 62  RVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESF-KGRSVEDVLRQQIEKKEFYD 121
           RVGLK+++TPI SL+GSKGK + DGGSPWK FDKVVE+F KGRSVED+LRQQIE K+FYD
Sbjct: 63  RVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDFYD 122

Query: 122 GGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYI 181
           GGDGG+ PPGGGGG      G  G DSSS SED S+ GI++E + V+LAT+GLV VYIYI
Sbjct: 123 GGDGGRTPPGGGGG-----GGSSGGDSSSESEDPSILGILEETMHVVLATIGLVLVYIYI 182

Query: 182 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFY-QSLMKKKKYDQYWLEKAILSTP 241
           + G+EL  LAKDYIKYLFG  +S RLK AMY+WGKFY +   KK K D+YWLEKAIL+TP
Sbjct: 183 IEGQELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTP 242

Query: 242 TWWDNPDKY 249
           TWWD+PDKY
Sbjct: 243 TWWDHPDKY 246

[Close]

BLAST of CSPI01G24490 vs. NCBI nr
Match: KGN65868.1 (hypothetical protein Csa_023343 [Cucumis sativus])

HSP 1 Score: 541.2 bits (1393), Expect = 5.3e-150
Identity = 278/280 (99.29%), Postives = 279/280 (99.64%), Query Frame = 0


Query: 1   MSSMQITATRNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MSSMQITAT+NSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH
Sbjct: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESFKGRSVEDVLRQQIEKKEFYD 120
           RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKG DKVVESFKGRSVEDVLRQQIEKKEFYD
Sbjct: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEKKEFYD 120

Query: 121 GGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYI 180
           GGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYI
Sbjct: 121 GGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYI 180

Query: 181 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT 240
           LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT
Sbjct: 181 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT 240

Query: 241 WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF 281
           WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF
Sbjct: 241 WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF 280

[Close]

BLAST of CSPI01G24490 vs. NCBI nr
Match: XP_031742537.1 (uncharacterized protein LOC101222813, partial [Cucumis sativus])

HSP 1 Score: 449.5 bits (1155), Expect = 2.1e-122
Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 0


Query: 51  QGLPVLKYEHRRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESFKGRSVEDVLR 110
           QGLPVLKYEHRRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKG DKVVESFKGRSVEDVLR
Sbjct: 81  QGLPVLKYEHRRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFKGRSVEDVLR 140

Query: 111 QQIEKKEFYDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILAT 170
           QQIEKKEFYDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILAT
Sbjct: 141 QQIEKKEFYDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILAT 200

Query: 171 LGLVFVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYW 230
           LGLVFVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYW
Sbjct: 201 LGLVFVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYW 260

Query: 231 LEKAILSTPTWWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF 281
           LEKAILSTPTWWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF
Sbjct: 261 LEKAILSTPTWWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF 310

[Close]

BLAST of CSPI01G24490 vs. NCBI nr
Match: XP_008444591.1 (PREDICTED: uncharacterized protein LOC103487859 [Cucumis melo])

HSP 1 Score: 411.0 bits (1055), Expect = 8.3e-111
Identity = 214/277 (77.26%), Postives = 242/277 (87.36%), Query Frame = 0


Query: 1   MSSMQITATRNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MSSMQITAT+NSICANKSICLVSKSIYPSFHANQS RAVVNLSANASYFKQGLP+LKY+H
Sbjct: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSLRAVVNLSANASYFKQGLPILKYKH 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESF-KGRSVEDVLRQQIEKKEFY 120
           RRVGLK+QHTPIVSL+GSKGKGSDDGGSPWK FDKVVESF KG SVEDVLR+QIEKKEFY
Sbjct: 61  RRVGLKHQHTPIVSLFGSKGKGSDDGGSPWKAFDKVVESFKKGGSVEDVLRKQIEKKEFY 120

Query: 121 DGGDGGKRPP--GGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVY 180
           DGGDGG+RPP  GGGGG GGG  G G EDSSSG++D+SL   +DE LQV+LATLG +F+Y
Sbjct: 121 DGGDGGRRPPSGGGGGGGGGGGGGSGSEDSSSGAKDFSLAEALDETLQVVLATLGFIFMY 180

Query: 181 IYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILS 240
            Y+L+GEE++RL KDYIKY FGGSKSVRL+RAMY WG+FYQ L  KKKYD++WLEKAI++
Sbjct: 181 FYLLNGEEVTRLLKDYIKYRFGGSKSVRLRRAMYEWGRFYQRLTAKKKYDEFWLEKAIIN 240

Query: 241 TPTWWDNPDKYMPK-----KAQNQKQNVASDDYDETD 270
           TPTWWD+PD Y        KA+NQ++N ASDD  ETD
Sbjct: 241 TPTWWDHPDNYRHAAMAYGKAENQEKNFASDDDGETD 277

[Close]

BLAST of CSPI01G24490 vs. NCBI nr
Match: XP_038895689.1 (uncharacterized protein LOC120083861 [Benincasa hispida])

HSP 1 Score: 405.2 bits (1040), Expect = 4.6e-109
Identity = 213/284 (75.00%), Postives = 244/284 (85.92%), Query Frame = 0


Query: 1   MSSMQITATRNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MSSMQITAT+NSIC+NKSICLVSKSIYPSFHA+QSR  +VNLSAN S FKQGLPVLKY+H
Sbjct: 1   MSSMQITATQNSICSNKSICLVSKSIYPSFHASQSRSVLVNLSANGSSFKQGLPVLKYKH 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESF-KGRSVEDVLRQQIEKKEFY 120
           RRVGLK+QHTPIVSL+GSKGK + DGGSPWK FD+VVE+F KGRSVEDVLRQQIEKKEFY
Sbjct: 61  RRVGLKHQHTPIVSLFGSKGKDTGDGGSPWKAFDQVVENFKKGRSVEDVLRQQIEKKEFY 120

Query: 121 DGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIY 180
           DGG+GGKRPP GGGGSG G       DSSSGSED SL GI+DE LQV+LATLG +F+YIY
Sbjct: 121 DGGNGGKRPPSGGGGSGSG-------DSSSGSEDDSLAGILDETLQVVLATLGFIFLYIY 180

Query: 181 ILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTP 240
           I++GEEL+RLAKDYIKYLFGGSKSVRL+R+MY WG+FYQ L +KK+YD+YWLEKAIL+TP
Sbjct: 181 IINGEELARLAKDYIKYLFGGSKSVRLRRSMYQWGRFYQKLTEKKQYDEYWLEKAILNTP 240

Query: 241 TWWDNPDKYMPK-----KAQNQKQNVASDDYDETDYLDSDYGEI 279
           TWWD+PD Y        ++Q+QK+N ASDDY E D  +SD  EI
Sbjct: 241 TWWDHPDNYRRTVMAHIESQHQKENFASDDYGEVDKPNSDDEEI 277

[Close]

BLAST of CSPI01G24490 vs. NCBI nr
Match: XP_022140099.1 (uncharacterized protein LOC111010834 [Momordica charantia])

HSP 1 Score: 384.0 bits (985), Expect = 1.1e-102
Identity = 204/282 (72.34%), Postives = 234/282 (82.98%), Query Frame = 0


Query: 1   MSSMQITATRNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MSSMQITAT+NSIC+++SIC+ SKSIYPSF A +SR A+VNLSANASYFKQGLPVLKY+H
Sbjct: 1   MSSMQITATQNSICSSRSICIASKSIYPSFRATRSRSALVNLSANASYFKQGLPVLKYKH 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESF-KGRSVEDVLRQQIEKKEFY 120
           RR GL +QHTPIVSL+GSKGK S DGGSPWK FDKVVE+F KGRSVEDVLRQQIEKKEFY
Sbjct: 61  RRAGLNHQHTPIVSLFGSKGKESGDGGSPWKTFDKVVENFKKGRSVEDVLRQQIEKKEFY 120

Query: 121 DGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIY 180
           DGGDGGKRPP GGGGSG         DSSSGSED SL GI+DE LQVILAT+G +F+YIY
Sbjct: 121 DGGDGGKRPPSGGGGSG---------DSSSGSEDDSLGGIIDETLQVILATIGFIFLYIY 180

Query: 181 ILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTP 240
           I+SGEEL+RLAKDYIK++FGGSKSVRLKRAMY WG+FYQ L +KK+YD+YWLEKAI++TP
Sbjct: 181 IISGEELTRLAKDYIKFVFGGSKSVRLKRAMYKWGRFYQKLTEKKQYDEYWLEKAIINTP 240

Query: 241 TWWDNPDK-------YMPKKAQNQKQNVASDDYDETDYLDSD 275
           TWWD+PDK       YM  + +NQ      +D  E D  +SD
Sbjct: 241 TWWDHPDKYRRAVMDYMESQYENQHSASNVNDDAEMDVSNSD 273

[Close]

BLAST of CSPI01G24490 vs. TAIR 10
Match: AT2G43630.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67 Blast hits to 67 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 179.1 bits (453), Expect = 4.9e-45
Identity = 112/263 (42.59%), Postives = 159/263 (60.46%), Query Frame = 0


Query: 20  CLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEHRRVGLKYQHTPIVSLYGSK 79
           C+ S  I  S   +   R    L A A+   Q  P+L +  R    K + +  V L+G K
Sbjct: 23  CISSVPIRSSVRFDHFPRTSFTLRATAAVSTQFSPLLDHRRRLPTGKSKQSSAVCLFGGK 82

Query: 80  GK--GSDDGGSPWKGFDKVVESFKGRSVEDVLRQQIEKKEFYDGGDGGKRPPGGGGGSGG 139
            K  GSD+  SPWK  +K +     +SVED+LR+QI+KK+FYD   GG  PP GGG  GG
Sbjct: 83  DKPDGSDE-ISPWKAIEKAMGK---KSVEDMLREQIQKKDFYDTDSGGNMPPRGGGSGGG 142

Query: 140 GDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYILSGEELSRLAKDYIKYL 199
           G +G+      SG ED  L GI DE LQV+LATLG +F+Y YI++GEEL +LA+DYI++L
Sbjct: 143 GGNGE-ERPEGSGGEDGGLAGIADETLQVVLATLGFIFLYTYIITGEELVKLARDYIRFL 202

Query: 200 FGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPTWWDNPDKYMPKKAQNQK 259
            G  K+VRL RAM +W  F + + +++ YD+YWLEKAI++TPTW+D+P+KY       + 
Sbjct: 203 MGRPKTVRLTRAMDSWNGFLEKMSRQRVYDEYWLEKAIINTPTWYDSPEKY------RRV 262

Query: 260 QNVASDDYDETDYLDSDYGEIDF 281
                D   +  Y++S+  E+ +
Sbjct: 263 IKAYVDSNSDEAYVESNSDEVSY 274

[Close]

BLAST of CSPI01G24490 vs. TAIR 10
Match: AT3G59640.1 (glycine-rich protein )

HSP 1 Score: 130.2 bits (326), Expect = 2.6e-30
Identity = 98/239 (41.00%), Postives = 137/239 (57.32%), Query Frame = 0


Query: 1   MSSMQITATRNSI-CANKSICL-VSKSIYPS---FHANQSRRAVVNLSANASYFKQGLPV 60
           MSS Q    R S+ CA  +    VS + + S   F      +  +  SA++S   Q  P+
Sbjct: 1   MSSTQANLCRPSLFCARTTQTRHVSSAPFMSSLRFDYRPLPKLAIRASASSSMSSQFSPL 60

Query: 61  LKYEHRRVGLKYQHTPIVSLYGSKGK--GSDDGGSPWKGFDKVVESFKGRSVEDVLRQQI 120
             +  R      +  P+V L G K K  GS++  S W+  +K +     +SVED+LR+QI
Sbjct: 61  QNHRCR----NQRQGPVVCLLGGKDKSNGSNELSSTWEAIEKAMGK---KSVEDMLREQI 120

Query: 121 EKKEFYDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGL 180
           +KK+      GG  P G GGG GG + G+ G   SSG ED  L    DE LQV+LATLG 
Sbjct: 121 QKKD-----TGGIPPRGRGGGGGGRNGGNNGSGGSSG-EDGGLASFGDETLQVVLATLGF 180

Query: 181 VFVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLE 233
           +F+Y YI++GEEL RLA+DYI+YL G  KSVRL R M  W +F++ + +KK Y++YWL+
Sbjct: 181 IFLYFYIINGEELFRLARDYIRYLIGRPKSVRLTRVMEGWSRFFEKMSRKKVYNEYWLK 226

[Close]

BLAST of CSPI01G24490 vs. TAIR 10
Match: AT3G59640.2 (glycine-rich protein )

HSP 1 Score: 130.2 bits (326), Expect = 2.6e-30
Identity = 98/239 (41.00%), Postives = 137/239 (57.32%), Query Frame = 0


Query: 1   MSSMQITATRNSI-CANKSICL-VSKSIYPS---FHANQSRRAVVNLSANASYFKQGLPV 60
           MSS Q    R S+ CA  +    VS + + S   F      +  +  SA++S   Q  P+
Sbjct: 1   MSSTQANLCRPSLFCARTTQTRHVSSAPFMSSLRFDYRPLPKLAIRASASSSMSSQFSPL 60

Query: 61  LKYEHRRVGLKYQHTPIVSLYGSKGK--GSDDGGSPWKGFDKVVESFKGRSVEDVLRQQI 120
             +  R      +  P+V L G K K  GS++  S W+  +K +     +SVED+LR+QI
Sbjct: 61  QNHRCR----NQRQGPVVCLLGGKDKSNGSNELSSTWEAIEKAMGK---KSVEDMLREQI 120

Query: 121 EKKEFYDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGL 180
           +KK+      GG  P G GGG GG + G+ G   SSG ED  L    DE LQV+LATLG 
Sbjct: 121 QKKD-----TGGIPPRGRGGGGGGRNGGNNGSGGSSG-EDGGLASFGDETLQVVLATLGF 180

Query: 181 VFVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLE 233
           +F+Y YI++GEEL RLA+DYI+YL G  KSVRL R M  W +F++ + +KK Y++YWL+
Sbjct: 181 IFLYFYIINGEELFRLARDYIRYLIGRPKSVRLTRVMEGWSRFFEKMSRKKVYNEYWLK 226

The following BLAST results are available for this feature:

BLAST of CSPI01G24490 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI01G24490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVP5	2.6e-150	99.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534740 PE=4 SV=1	[more]
A0A1S3BA69	4.0e-111	77.26	uncharacterized protein LOC103487859 OS=Cucumis melo OX=3656 GN=LOC103487859 PE=...	[more]
A0A6J1CES8	5.3e-103	72.34	uncharacterized protein LOC111010834 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1K2H4	1.9e-89	62.37	uncharacterized protein LOC111490456 OS=Cucurbita maxima OX=3661 GN=LOC111490456...	[more]
A0A6J1GSZ4	4.3e-89	71.08	uncharacterized protein LOC111457207 OS=Cucurbita moschata OX=3662 GN=LOC1114572...	[more]

BLAST of CSPI01G24490 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65868.1	5.3e-150	99.29	hypothetical protein Csa_023343 [Cucumis sativus]	[more]
XP_031742537.1	2.1e-122	99.57	uncharacterized protein LOC101222813, partial [Cucumis sativus]	[more]
XP_008444591.1	8.3e-111	77.26	PREDICTED: uncharacterized protein LOC103487859 [Cucumis melo]	[more]
XP_038895689.1	4.6e-109	75.00	uncharacterized protein LOC120083861 [Benincasa hispida]	[more]
XP_022140099.1	1.1e-102	72.34	uncharacterized protein LOC111010834 [Momordica charantia]	[more]

BLAST of CSPI01G24490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43630.1	4.9e-45	42.59	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G59640.1	2.6e-30	41.00	glycine-rich protein	[more]
AT3G59640.2	2.6e-30	41.00	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..152
None	No IPR available	PANTHER	PTHR35483:SF1	NUCLEUSENVELOPE PROTEIN	coord: 1..267
None	No IPR available	PANTHER	PTHR35483	NUCLEUSENVELOPE PROTEIN	coord: 1..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G24490.1	CSPI01G24490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane