CSPI01G23480 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G23480
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Copper transporter
Location	Chr1: 19040022 .. 19040647 (+)
RNA-Seq Expression	CSPI01G23480
Synteny	CSPI01G23480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAAATAAAATTTGAAATAACAAGAAAAAGAAAGCTTCGGTACTAGCAAATTTGTAGTACACTCACAACTTTATTTGATAGTACAATTTCAACTTCATTATTTCATTGCAATCCAAACAAAATGTACCAAAAAGAAAATGGAAACTCACATGACATTTTATTGGGGAAAGACAATAGAGATCCTCTTCCCCGGTTGGCCTGGTCGGAGCTTTTTCTCCTCAGTCATCGTTTTAATTTTTGTTTTTCTCCTTGCCTTCACCGTGGAGTGGCTCTCACACACTAAATTCACCACCTCCGCCATGGACAACCTCACTGCCGGCCTGGTTCAGACCATTCTTTACGGCATTCGAGTGGGGTTGGCTTTCATCGTTATGTTGGCGGTCATGTCATATAACGTGGGAATTTTGCTAGCGGCAGTGACTGGATATTCGATCGGGTTCTTAGTTTATGGGAGTAAGATATTTAGTCGATCGAAAATTGATCCAAATCTAAATTTAGATTCTCTTGATCTTCCACCACTCAATTGTTAGCATAAAGAATTAATTAAGATAGTTTGTTTTGTTTTATATGAATTTCAATTTTAGTTTGTTTTGTTTTATATGAATTTCAATTTTAGTTTATTCT

mRNA sequence

GTTGAAATAAAATTTGAAATAACAAGAAAAAGAAAGCTTCGGTACTAGCAAATTTGTAGTACACTCACAACTTTATTTGATAGTACAATTTCAACTTCATTATTTCATTGCAATCCAAACAAAATGTACCAAAAAGAAAATGGAAACTCACATGACATTTTATTGGGGAAAGACAATAGAGATCCTCTTCCCCGGTTGGCCTGGTCGGAGCTTTTTCTCCTCAGTCATCGTTTTAATTTTTGTTTTTCTCCTTGCCTTCACCGTGGAGTGGCTCTCACACACTAAATTCACCACCTCCGCCATGGACAACCTCACTGCCGGCCTGGTTCAGACCATTCTTTACGGCATTCGAGTGGGGTTGGCTTTCATCGTTATGTTGGCGGTCATGTCATATAACGTGGGAATTTTGCTAGCGGCAGTGACTGGATATTCGATCGGGTTCTTAGTTTATGGGAGTAAGATATTTAGTCGATCGAAAATTGATCCAAATCTAAATTTAGATTCTCTTGATCTTCCACCACTCAATTGTTAGCATAAAGAATTAATTAAGATAGTTTGTTTTGTTTTATATGAATTTCAATTTTAGTTTGTTTTGTTTTATATGAATTTCAATTTTAGTTTATTCT

Coding sequence (CDS)

ATGGAAACTCACATGACATTTTATTGGGGAAAGACAATAGAGATCCTCTTCCCCGGTTGGCCTGGTCGGAGCTTTTTCTCCTCAGTCATCGTTTTAATTTTTGTTTTTCTCCTTGCCTTCACCGTGGAGTGGCTCTCACACACTAAATTCACCACCTCCGCCATGGACAACCTCACTGCCGGCCTGGTTCAGACCATTCTTTACGGCATTCGAGTGGGGTTGGCTTTCATCGTTATGTTGGCGGTCATGTCATATAACGTGGGAATTTTGCTAGCGGCAGTGACTGGATATTCGATCGGGTTCTTAGTTTATGGGAGTAAGATATTTAGTCGATCGAAAATTGATCCAAATCTAAATTTAGATTCTCTTGATCTTCCACCACTCAATTGTTAG

Protein sequence

METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTAGLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKIDPNLNLDSLDLPPLNC*

Homology

[Close]

BLAST of CSPI01G23480 vs. ExPASy Swiss-Prot
Match: Q39065 (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.0e-26
Identity = 61/133 (45.86%), Postives = 85/133 (63.91%), Query Frame = 0


Query: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKF---TTSAMDN 60
           M  HMTF+WGK  E+LF GWPG S     + LIFVF LA   EWL+H+     +T    N
Sbjct: 40  MMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSAN 99

Query: 61  LTAGLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKIDPN 120
             AGL+QT +Y +R+GLA++VMLAVMS+N G+ L A+ G+++GF+++GS+ F  +  D  
Sbjct: 100 RAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTSDDRK 159

Query: 121 LNLDSLDLPPLNC 131
            N     +PP  C
Sbjct: 160 TNY----VPPSGC 168

[Close]

BLAST of CSPI01G23480 vs. ExPASy Swiss-Prot
Match: Q9STG2 (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.4e-24
Identity = 54/116 (46.55%), Postives = 74/116 (63.79%), Query Frame = 0


Query: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTK-FTTSAMDNLT 60
           M  HMTF+WGK  E+LF GWPG S     + LI +FLLA   EWL+H+     S   N  
Sbjct: 28  MMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRA 87

Query: 61  AGLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKID 116
           AGL QT +Y ++ GL+++VMLAVMS+N G+ + A+ GY +GF ++GS  F +   D
Sbjct: 88  AGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFFLFGSTTFKKPSDD 143

[Close]

BLAST of CSPI01G23480 vs. ExPASy Swiss-Prot
Match: Q8GWP3 (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-23
Identity = 56/113 (49.56%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 4   HMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA-GL 63
           HMTF+WGK  EILF GWPG S    V+ LI VFLLA  VEWL+H+           A GL
Sbjct: 26  HMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAKGL 85

Query: 64  VQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKID 116
           VQT +Y ++ GLA++VMLAVMS+N G+ + A+ G+++GF+++GS  F     D
Sbjct: 86  VQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGFMLFGSTAFKNPSDD 138

[Close]

BLAST of CSPI01G23480 vs. ExPASy Swiss-Prot
Match: Q9FGU8 (Copper transporter 3 OS=Arabidopsis thaliana OX=3702 GN=COPT3 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-20
Identity = 49/119 (41.18%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 4   HMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTAGLV 63
           HMTF+WGKT E+LF GWPG S     + L  +F+++   E LS   F  S   +L  GL+
Sbjct: 31  HMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGGLL 90

Query: 64  QTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKIDPNLNLDS 123
           QT +Y +R  L+++VMLAVMS+N G+ +AA+ G+ +GF+++GS+ F  +  + +  + S
Sbjct: 91  QTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFRATSSNSHTEVQS 149

[Close]

BLAST of CSPI01G23480 vs. ExPASy Swiss-Prot
Match: Q8SAA5 (Copper transporter 4 OS=Arabidopsis thaliana OX=3702 GN=COPT4 PE=2 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 1.7e-16
Identity = 45/114 (39.47%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 4   HMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTS---AMDNLTA 63
           H TFYWG   ++LF GWPG       + LIFVF LAF  EWL+     +S     D L  
Sbjct: 31  HPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADKLAK 90

Query: 64  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKI 115
              +T +Y ++ G +++V+LAV+S+N G+ LAA+ G+++GF V+  + F    I
Sbjct: 91  VAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFRNRDI 144

[Close]

BLAST of CSPI01G23480 vs. ExPASy TrEMBL
Match: A0A0A0LXH5 (Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526835 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.7e-64
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60
           METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA
Sbjct: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60

Query: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKIDPNLNL 120
           GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIF+RSKIDPNLNL
Sbjct: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFNRSKIDPNLNL 120

Query: 121 DSLDLPPLNC 131
           DSLDLPPLNC
Sbjct: 121 DSLDLPPLNC 130

[Close]

BLAST of CSPI01G23480 vs. ExPASy TrEMBL
Match: A0A5A7SL08 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00120 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 5.0e-56
Identity = 111/130 (85.38%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60
           METHMTFYWGKT+EILF GWPGRSFFS  + LIFVFLLAFTVEWLSHTKFTT  + NLTA
Sbjct: 3   METHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTA 62

Query: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKIDPNLNL 120
           GLVQTILYG+RVGLAFIVMLAVMSYNVG+LLAAVTGYS+GFLVYGS++FSRSK+D NLNL
Sbjct: 63  GLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSRVFSRSKVDQNLNL 122

Query: 121 DSLDLPPLNC 131
           D  DLPPLNC
Sbjct: 123 DLSDLPPLNC 132

[Close]

BLAST of CSPI01G23480 vs. ExPASy TrEMBL
Match: A0A5D3BC00 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001700 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.5e-56
Identity = 111/130 (85.38%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60
           METHMTFYWGKT+EILF GWPGRSFFS  + LIFVFLLAFTVEWLSHTKFTT  + NLTA
Sbjct: 3   METHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTA 62

Query: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKIDPNLNL 120
           GLVQTILYG+RVGLAFIVMLAVMSYNVG+LLAAVTGYS+GFLVYGS++FSRSK+D NLNL
Sbjct: 63  GLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNLNL 122

Query: 121 DSLDLPPLNC 131
           D  DLPPLNC
Sbjct: 123 DLSDLPPLNC 132

[Close]

BLAST of CSPI01G23480 vs. ExPASy TrEMBL
Match: A0A6J1KDT9 (Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493433 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 6.8e-45
Identity = 92/130 (70.77%), Postives = 109/130 (83.85%), Query Frame = 0


Query: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60
           ME HMTF+WGK+ EILF GWPGRS  S  I L+F+FL+AF VEWLSHTK T S  D++ A
Sbjct: 1   MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFIFLVAFAVEWLSHTKLTASVADDVFA 60

Query: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKIDPNLNL 120
           G VQT LYG+RVGLAF+VMLAVMS+NVG+LLAAV GYS+GFLVYGS++F+RSKID NLN+
Sbjct: 61  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFNRSKIDLNLNM 120

Query: 121 DSLDLPPLNC 131
              D+PPLNC
Sbjct: 121 S--DIPPLNC 128

[Close]

BLAST of CSPI01G23480 vs. ExPASy TrEMBL
Match: A0A6J1GAH5 (Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452258 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.2e-44
Identity = 92/130 (70.77%), Postives = 109/130 (83.85%), Query Frame = 0


Query: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60
           ME HMTF+WGK+ EILF GWPGR+  S  I L+FVFL+AF VEWLSHTK T S  D++ A
Sbjct: 1   MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA 60

Query: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKIDPNLNL 120
           G VQT LYG+RVGLAF+VMLAVMS+NVG+LLAAV GYS+GFLVYGS++F+RSKID NLN+
Sbjct: 61  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFNRSKIDLNLNM 120

Query: 121 DSLDLPPLNC 131
              D+PPLNC
Sbjct: 121 S--DIPPLNC 128

[Close]

BLAST of CSPI01G23480 vs. NCBI nr
Match: KAA0031772.1 (putative Copper transporter [Cucumis melo var. makuwa])

HSP 1 Score: 226.9 bits (577), Expect = 1.0e-55
Identity = 111/130 (85.38%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60
           METHMTFYWGKT+EILF GWPGRSFFS  + LIFVFLLAFTVEWLSHTKFTT  + NLTA
Sbjct: 3   METHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTA 62

Query: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKIDPNLNL 120
           GLVQTILYG+RVGLAFIVMLAVMSYNVG+LLAAVTGYS+GFLVYGS++FSRSK+D NLNL
Sbjct: 63  GLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSRVFSRSKVDQNLNL 122

Query: 121 DSLDLPPLNC 131
           D  DLPPLNC
Sbjct: 123 DLSDLPPLNC 132

[Close]

BLAST of CSPI01G23480 vs. NCBI nr
Match: TYJ97360.1 (putative Copper transporter [Cucumis melo var. makuwa])

HSP 1 Score: 226.5 bits (576), Expect = 1.4e-55
Identity = 111/130 (85.38%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60
           METHMTFYWGKT+EILF GWPGRSFFS  + LIFVFLLAFTVEWLSHTKFTT  + NLTA
Sbjct: 3   METHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTA 62

Query: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKIDPNLNL 120
           GLVQTILYG+RVGLAFIVMLAVMSYNVG+LLAAVTGYS+GFLVYGS++FSRSK+D NLNL
Sbjct: 63  GLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNLNL 122

Query: 121 DSLDLPPLNC 131
           D  DLPPLNC
Sbjct: 123 DLSDLPPLNC 132

[Close]

BLAST of CSPI01G23480 vs. NCBI nr
Match: KGN66202.2 (hypothetical protein Csa_023200 [Cucumis sativus])

HSP 1 Score: 204.1 bits (518), Expect = 7.2e-49
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60
           METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA
Sbjct: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60

Query: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYG 106
           GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYG
Sbjct: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYG 105

[Close]

BLAST of CSPI01G23480 vs. NCBI nr
Match: XP_023525766.1 (copper transporter 1-like [Cucurbita pepo subsp. pepo] >KAG7036956.1 Copper transporter 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 190.3 bits (482), Expect = 1.1e-44
Identity = 93/130 (71.54%), Postives = 109/130 (83.85%), Query Frame = 0


Query: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60
           ME HMTF+WGK+ EILF GWPGRS  S  I L+FVFL+AF VEWLSHTK T S  D++ A
Sbjct: 1   MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA 60

Query: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKIDPNLNL 120
           G VQT LYG+RVGLAF+VMLAVMS+NVG+LLAAV GYS+GFLVYGS++F+RSKID NLN+
Sbjct: 61  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFNRSKIDLNLNM 120

Query: 121 DSLDLPPLNC 131
              D+PPLNC
Sbjct: 121 S--DIPPLNC 128

[Close]

BLAST of CSPI01G23480 vs. NCBI nr
Match: XP_022998910.1 (copper transporter 1-like [Cucurbita maxima])

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-44
Identity = 92/130 (70.77%), Postives = 109/130 (83.85%), Query Frame = 0


Query: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60
           ME HMTF+WGK+ EILF GWPGRS  S  I L+F+FL+AF VEWLSHTK T S  D++ A
Sbjct: 1   MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFIFLVAFAVEWLSHTKLTASVADDVFA 60

Query: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKIDPNLNL 120
           G VQT LYG+RVGLAF+VMLAVMS+NVG+LLAAV GYS+GFLVYGS++F+RSKID NLN+
Sbjct: 61  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFNRSKIDLNLNM 120

Query: 121 DSLDLPPLNC 131
              D+PPLNC
Sbjct: 121 S--DIPPLNC 128

[Close]

BLAST of CSPI01G23480 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 )

HSP 1 Score: 120.9 bits (302), Expect = 7.4e-28
Identity = 61/133 (45.86%), Postives = 85/133 (63.91%), Query Frame = 0


Query: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKF---TTSAMDN 60
           M  HMTF+WGK  E+LF GWPG S     + LIFVF LA   EWL+H+     +T    N
Sbjct: 40  MMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSAN 99

Query: 61  LTAGLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKIDPN 120
             AGL+QT +Y +R+GLA++VMLAVMS+N G+ L A+ G+++GF+++GS+ F  +  D  
Sbjct: 100 RAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTSDDRK 159

Query: 121 LNLDSLDLPPLNC 131
            N     +PP  C
Sbjct: 160 TNY----VPPSGC 168

[Close]

BLAST of CSPI01G23480 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 )

HSP 1 Score: 111.7 bits (278), Expect = 4.5e-25
Identity = 54/116 (46.55%), Postives = 74/116 (63.79%), Query Frame = 0


Query: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTK-FTTSAMDNLT 60
           M  HMTF+WGK  E+LF GWPG S     + LI +FLLA   EWL+H+     S   N  
Sbjct: 28  MMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRA 87

Query: 61  AGLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKID 116
           AGL QT +Y ++ GL+++VMLAVMS+N G+ + A+ GY +GF ++GS  F +   D
Sbjct: 88  AGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFFLFGSTTFKKPSDD 143

[Close]

BLAST of CSPI01G23480 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family )

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-24
Identity = 56/113 (49.56%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 4   HMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA-GL 63
           HMTF+WGK  EILF GWPG S    V+ LI VFLLA  VEWL+H+           A GL
Sbjct: 26  HMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAKGL 85

Query: 64  VQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKID 116
           VQT +Y ++ GLA++VMLAVMS+N G+ + A+ G+++GF+++GS  F     D
Sbjct: 86  VQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGFMLFGSTAFKNPSDD 138

[Close]

BLAST of CSPI01G23480 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 )

HSP 1 Score: 100.9 bits (250), Expect = 8.0e-22
Identity = 49/119 (41.18%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 4   HMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTAGLV 63
           HMTF+WGKT E+LF GWPG S     + L  +F+++   E LS   F  S   +L  GL+
Sbjct: 31  HMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGGLL 90

Query: 64  QTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKIDPNLNLDS 123
           QT +Y +R  L+++VMLAVMS+N G+ +AA+ G+ +GF+++GS+ F  +  + +  + S
Sbjct: 91  QTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFRATSSNSHTEVQS 149

[Close]

BLAST of CSPI01G23480 vs. TAIR 10
Match: AT2G37925.1 (copper transporter 4 )

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17
Identity = 45/114 (39.47%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 4   HMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTS---AMDNLTA 63
           H TFYWG   ++LF GWPG       + LIFVF LAF  EWL+     +S     D L  
Sbjct: 31  HPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADKLAK 90

Query: 64  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFSRSKI 115
              +T +Y ++ G +++V+LAV+S+N G+ LAA+ G+++GF V+  + F    I
Sbjct: 91  VAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFRNRDI 144

The following BLAST results are available for this feature:

BLAST of CSPI01G23480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39065	1.0e-26	45.86	Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2	[more]
Q9STG2	6.4e-24	46.55	Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1	[more]
Q8GWP3	1.4e-23	49.56	Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1	[more]
Q9FGU8	1.1e-20	41.18	Copper transporter 3 OS=Arabidopsis thaliana OX=3702 GN=COPT3 PE=2 SV=1	[more]
Q8SAA5	1.7e-16	39.47	Copper transporter 4 OS=Arabidopsis thaliana OX=3702 GN=COPT4 PE=2 SV=2	[more]

BLAST of CSPI01G23480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXH5	1.7e-64	99.23	Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526835 PE=3 SV=1	[more]
A0A5A7SL08	5.0e-56	85.38	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G0...	[more]
A0A5D3BC00	6.5e-56	85.38	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G0...	[more]
A0A6J1KDT9	6.8e-45	70.77	Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493433 PE=3 SV=1	[more]
A0A6J1GAH5	1.2e-44	70.77	Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452258 PE=3 SV=1	[more]

BLAST of CSPI01G23480 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031772.1	1.0e-55	85.38	putative Copper transporter [Cucumis melo var. makuwa]	[more]
TYJ97360.1	1.4e-55	85.38	putative Copper transporter [Cucumis melo var. makuwa]	[more]
KGN66202.2	7.2e-49	100.00	hypothetical protein Csa_023200 [Cucumis sativus]	[more]
XP_023525766.1	1.1e-44	71.54	copper transporter 1-like [Cucurbita pepo subsp. pepo] >KAG7036956.1 Copper tran...	[more]
XP_022998910.1	1.4e-44	70.77	copper transporter 1-like [Cucurbita maxima]	[more]

BLAST of CSPI01G23480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59030.1	7.4e-28	45.86	copper transporter 1	[more]
AT3G46900.1	4.5e-25	46.55	copper transporter 2	[more]
AT2G26975.1	1.0e-24	49.56	Ctr copper transporter family	[more]
AT5G59040.1	8.0e-22	41.18	copper transporter 3	[more]
AT2G37925.1	1.2e-17	39.47	copper transporter 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 5..52 e-value: 3.1E-6 score: 27.8 coord: 57..103 e-value: 9.7E-9 score: 36.0
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 1..129
None	No IPR available	PANTHER	PTHR12483:SF86	SUBFAMILY NOT NAMED	coord: 1..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G23480.1	CSPI01G23480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006878	cellular copper ion homeostasis
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity