CSPI01G21500 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAAATTCTCTTATCATTAACAAATGTGGTTTAGGATTAGTTGATTCCATTTGATCTTCATCTCTACTATCTATGTAGACCTCCTTTTCATCAATTACAACTCACTTGATCGGGCTTAAAGGACGCCTTCCATGAATTAATTGTGTTTTTTGATTCGTTATTTCTTGAAGTTTCTTTTTAAAATTTTATTTTTTTGTGATTTATTTTTCATACTTTAGTAAAAAAAAATGTGGCGGTTTGATGAACACTTTCCTATCGGTTTCGGGGAGGATAGCCGGTTCCGGTTTTGGTTTTGTTGAAGTTCATCAGATGTACAGGCGACAGTTTGCTTGTTGAATCACAACTAGAGAATCAAGGTCACTGTTTCAATTTCATTTCCAAATCCGAGAAAAGATAAAGGCCGAATCAAGCAAAGGAAGAAGAGGGGAAATGGTTTGTGTATCTCTATCTTCTGCTGTTTCACTTTATATTCCTTCTTTCTACAAATCCAAATTCTCCGTTCCTCTCTCCCTAAGATCTTCACCGCCAAATGCAAAGCTCTCGTTAAATTCTGCCGCTAAACAGAGTTCAATCTGTTACAATCCGCTCAGGTAATTTCAATGACAGATTGATTGAGTAGTAGTGGTTTTGGTTTTAAAAATTTGAGAGTTTTGAAAAGAAAAGTTGTTTGATCAGGTTTGCTGTCGGTAGCGAGGGTATTAACGAGAAGAAGAGTCGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTGTTAACACTCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGTGTAATTCTCTCTTCTTTCTATCTGAGTATTGTATAATTGGATACAAGCACCATCTCGTCTAATATATGATATTATATTTTATGTGGAACTGTGCTATTATTTATCGTTAGTAATTTGTGATACGTTTCTGTAGCATCAGCACAGAATGGTCAATTTTAACCAATACTCAGTTGGGGTTCAAATGCTTTGCCACAATTCTTTTGATTCCGGTGGTTATTTAGTTTCGTTTAAGTCGGTAGCATTCAGTGGTTATATTTATACAGTCAACATGCCACCAGTTTCACCTTTATCTGCTATTTCAGAGTCCATTCCACCTCCACGTATCAAAGTATAACTTTTAAAACCCTAGGTTTCTTCTTCAGGGTCTTAATGCTCGCAAAGGGAACTGGGATTCAGAAGTCATTTATCGTTCCGCTATTTGCACTTCAGGCGCCTGCAAGTGTTATCTCCTGGATTAAGTAAGCCTCGTGTAAAATCTCTATCAGTATATATCAACAGGATGCCAAGATCTATGAGTAATCAGTTCCACTTTCTAAATGGCTCAATTTTTTGGTTCTATCTTCTATATCAGAGGAGAGTACGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTCATCCCTGGTATTCTATTCTGTCTTCTGATTTTCTTTACTTAGCTAATGAATTTAGTGACTGTTTAGCATTCACTGTATTCGGGAGGAACTTAGTTCATAGCTTGGCTAGAAACGTGTTAGTTTGAGCCTCACTTAGTTCAATTAACTGAAAGGGTTCACTTCGTACGATCTCTTGAATGAATAGAAAAATCATAGGTAATCGAATGCTGGGTTCTTTTGGATGTAGGTGAATTGGAGATACCATTCATATCACTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAACCTTAAGGTAAACAACCTTTTAATCATATTTCACTTTATAATTTTTCCAATCTTAGCATTTGATCATGTTAGAATTAGCGGGCTTGTTGTATGTTGAAAGTCCGAGAGTTTGTTAAGATTTTATAGTGCCCTAATTATCTTTTATTATTTTTATTATGGGTTCTATAACCTATAAATAAATGTTCCCTATATCATTATGAGATAGAGAAAAATAATAAAAAAATAACATCGTGGTTTTCTCCTAAAATGGTTTATCTTTCTATTTTTCTTCATTCAATAGATCATTATCTGTCATTTGCAGGGGAACTCAAGAAGGGTGCATTATCTCCCTACTGATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCAGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTAGCAGTCGTTTGTATTACCGCTGTTTCATTCCTGTTCGTGATCTGAGTTCCTTAGTCACTCCCAAGTAAACCTTATGGGTTAAATCTTCAATAAACACTATTGTTCGTCCTGTAATAGTTACACAATAGTTAGAATGTACAGACCTTCCTTTTCATGTTTATAAATACTATAAAGAAATGTTTATTTCTTTTTGCTTGTTTAATCTAATCATCATCCTGTGTCTGTTTTTAGTTATCACGAAATTGCATCAGATTGAACCTGAACAATTACTTGTTTCCCTTTCAAATAACATCAGCACTAACTAGTTATATATGGCAGTTTGTGAACTTGCTTTCTATCATCTGCGGTTTATTGAATAATTTGTACATTGTACAGCGAACAATCTTAAATTGGACAAAGTTGTCATTAATAGATAAAACTAAATGAACTCGTGCAAGCTGAAGCTCGAGTACAATGCCTCTTCCCTGGAAAACCAACCTAAAGAGCTTCCAAATGGAATTGACTTATCTATATTATTTGCTAACATTCATCCAAATTGGAGTTGACCTGTCTATATCTTTTTATTGGGTAACAATGTGAAATATCTTATGAATAGCATATGACCTATTTATTTCTTTAATCTACTGATGTATGTTCCTGTGGACTTCTTAGTTATCTAATGCATAACCTGATGTATAACAGCAATAACTTACTATATAATCTTTCTTTTACCATATTGATGTCTAACAATGCAAAAATGTGCAGCAAATAAGCGATTGCCATCTCTCTGTGGAGAAAAGAAACAATTTCTTCGGCTTACAGATGATTTGCCACGAGCAAACCCATAAGGTAAGTTATGATCCAAAGCAGCACCAATCGTTTTGATATCGAAGTGGCTGAGCTGGGCATGCCTGATGGTTCTGCACCATAAATTGATGGATCTGTGGGCGTATATGTTGGGTTTGTAGGTGTATATGTAGGGTTCGTGGTGGCTGGCGGTGGCGGTGTTTCAACTGTGGGGGCTGGCGGAGTTGGTGTTGGG ACAAATTCTCTTATCATTAACAAATGTGGTTTAGGATTAGTTGATTCCATTTGATCTTCATCTCTACTATCTATGTAGACCTCCTTTTCATCAATTACAACTCACTTGATCGGGCTTAAAGGACGCCTTCCATGAATTAATTGTGTTTTTTGATTCGTTATTTCTTGAAGTTTCTTTTTAAAATTTTATTTTTTTGTGATTTATTTTTCATACTTTAGTAAAAAAAAATGTGGCGGTTTGATGAACACTTTCCTATCGGTTTCGGGGAGGATAGCCGGTTCCGGTTTTGGTTTTGTTGAAGTTCATCAGATGTACAGGCGACAGTTTGCTTGTTGAATCACAACTAGAGAATCAAGGTCACTGTTTCAATTTCATTTCCAAATCCGAGAAAAGATAAAGGCCGAATCAAGCAAAGGAAGAAGAGGGGAAATGGTTTGTGTATCTCTATCTTCTGCTGTTTCACTTTATATTCCTTCTTTCTACAAATCCAAATTCTCCGTTCCTCTCTCCCTAAGATCTTCACCGCCAAATGCAAAGCTCTCGTTAAATTCTGCCGCTAAACAGAGTTCAATCTGTTACAATCCGCTCAGGTTTGCTGTCGGTAGCGAGGGTATTAACGAGAAGAAGAGTCGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTGTTAACACTCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGTGGTCTTAATGCTCGCAAAGGGAACTGGGATTCAGAAGTCATTTATCGTTCCGCTATTTGCACTTCAGGCGCCTGCAAGTGTTATCTCCTGGATTAAAGGAGAGTACGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTCATCCCTGGTGAATTGGAGATACCATTCATATCACTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAACCTTAAGGGGAACTCAAGAAGGGTGCATTATCTCCCTACTGATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCAGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTAGCAGTCGTTTGTATTACCGCTGTTTCATTCCTGTTCGTGATCTGAGTTCCTTAGTCACTCCCAAGTAAACCTTATGGGTTAAATCTTCAATAAACACTATTGTTCGTCCTGTAATAGTTACACAATAGTTAGAATGTACAGACCTTCCTTTTCATGTTTATAAATACTATAAAGAAATGTTTATTTCTTTTTGCTTGTTTAATCTAATCATCATCCTGTGTCTGTTTTTAGTTATCACGAAATTGCATCAGATTGAACCTGAACAATTACTTGTTTCCCTTTCAAATAACATCAGCACTAACTAGTTATATATGGCAGTTTGTGAACTTGCTTTCTATCATCTGCGGTTTATTGAATAATTTGTACATTGTACAGCGAACAATCTTAAATTGGACAAAGTTGTCATTAATAGATAAAACTAAATGAACTCGTGCAAGCTGAAGCTCGAGTACAATGCCTCTTCCCTGGAAAACCAACCTAAAGAGCTTCCAAATGGAATTGACTTATCTATATTATTTGCTAACATTCATCCAAATTGGAGTTGACCTGTCTATATCTTTTTATTGGGTAACAATGTGAAATATCTTATGAATAGCATATGACCTATTTATTTCTTTAATCTACTGATGTATGTTCCTGTGGACTTCTTAGTTATCTAATGCATAACCTGATGTATAACAGCAATAACTTACTATATAATCTTTCTTTTACCATATTGATGTCTAACAATGCAAAAATGTGCAGCAAATAAGCGATTGCCATCTCTCTGTGGAGAAAAGAAACAATTTCTTCGGCTTACAGATGATTTGCCACGAGCAAACCCATAAGGTAAGTTATGATCCAAAGCAGCACCAATCGTTTTGATATCGAAGTGGCTGAGCTGGGCATGCCTGATGGTTCTGCACCATAAATTGATGGATCTGTGGGCGTATATGTTGGGTTTGTAGGTGTATATGTAGGGTTCGTGGTGGCTGGCGGTGGCGGTGTTTCAACTGTGGGGGCTGGCGGAGTTGGTGTTGGG ATGGTTTGTGTATCTCTATCTTCTGCTGTTTCACTTTATATTCCTTCTTTCTACAAATCCAAATTCTCCGTTCCTCTCTCCCTAAGATCTTCACCGCCAAATGCAAAGCTCTCGTTAAATTCTGCCGCTAAACAGAGTTCAATCTGTTACAATCCGCTCAGGTTTGCTGTCGGTAGCGAGGGTATTAACGAGAAGAAGAGTCGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTGTTAACACTCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGTGGTCTTAATGCTCGCAAAGGGAACTGGGATTCAGAAGTCATTTATCGTTCCGCTATTTGCACTTCAGGCGCCTGCAAGTGTTATCTCCTGGATTAAAGGAGAGTACGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTCATCCCTGGTGAATTGGAGATACCATTCATATCACTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAACCTTAAGGGGAACTCAAGAAGGGTGCATTATCTCCCTACTGATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCAGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTAGCAGTCGTTTGTATTACCGCTGTTTCATTCCTGTTCGTGATCTGA MVCVSLSSAVSLYIPSFYKSKFSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGINEKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQTLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI* Homology
BLAST of CSPI01G21500 vs. ExPASy Swiss-Prot
Match: F4I1G5 (Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM2 PE=1 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.2e-59 Identity = 130/231 (56.28%), Postives = 162/231 (70.13%), Query Frame = 0
BLAST of CSPI01G21500 vs. ExPASy Swiss-Prot
Match: Q94AL8 (Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM1 PE=1 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 4.0e-58 Identity = 121/231 (52.38%), Postives = 167/231 (72.29%), Query Frame = 0
BLAST of CSPI01G21500 vs. ExPASy Swiss-Prot
Match: O23164 (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g37220 PE=2 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 3.0e-13 Identity = 48/143 (33.57%), Postives = 80/143 (55.94%), Query Frame = 0
BLAST of CSPI01G21500 vs. ExPASy Swiss-Prot
Match: Q9XIM7 (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=COR413PM1 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.8e-11 Identity = 46/143 (32.17%), Postives = 77/143 (53.85%), Query Frame = 0
BLAST of CSPI01G21500 vs. ExPASy Swiss-Prot
Match: Q9SVL6 (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=COR413PM2 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.8e-11 Identity = 40/127 (31.50%), Postives = 75/127 (59.06%), Query Frame = 0
BLAST of CSPI01G21500 vs. ExPASy TrEMBL
Match: A0A0A0LXM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G459500 PE=3 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 3.8e-112 Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of CSPI01G21500 vs. ExPASy TrEMBL
Match: A0A5D3DB21 (Cold-regulated 413 inner membrane protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00120 PE=3 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 2.0e-108 Identity = 216/229 (94.32%), Postives = 220/229 (96.07%), Query Frame = 0
BLAST of CSPI01G21500 vs. ExPASy TrEMBL
Match: A0A1S3B961 (cold-regulated 413 inner membrane protein 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487404 PE=3 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 2.0e-108 Identity = 216/229 (94.32%), Postives = 220/229 (96.07%), Query Frame = 0
BLAST of CSPI01G21500 vs. ExPASy TrEMBL
Match: A0A6J1K0I6 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490472 PE=3 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92 Identity = 189/229 (82.53%), Postives = 205/229 (89.52%), Query Frame = 0
BLAST of CSPI01G21500 vs. ExPASy TrEMBL
Match: A0A6J1CH44 (cold-regulated 413 inner membrane protein 1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111010803 PE=3 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 2.6e-92 Identity = 187/229 (81.66%), Postives = 204/229 (89.08%), Query Frame = 0
BLAST of CSPI01G21500 vs. NCBI nr
Match: XP_004147401.1 (cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus] >KGN65572.1 hypothetical protein Csa_019760 [Cucumis sativus]) HSP 1 Score: 414.1 bits (1063), Expect = 7.8e-112 Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of CSPI01G21500 vs. NCBI nr
Match: XP_008443932.1 (PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucumis melo] >KAA0057095.1 cold-regulated 413 inner membrane protein 2 [Cucumis melo var. makuwa] >TYK20630.1 cold-regulated 413 inner membrane protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 401.7 bits (1031), Expect = 4.0e-108 Identity = 216/229 (94.32%), Postives = 220/229 (96.07%), Query Frame = 0
BLAST of CSPI01G21500 vs. NCBI nr
Match: XP_038896035.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 375.2 bits (962), Expect = 4.0e-100 Identity = 202/229 (88.21%), Postives = 212/229 (92.58%), Query Frame = 0
BLAST of CSPI01G21500 vs. NCBI nr
Match: XP_022994881.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 349.4 bits (895), Expect = 2.4e-92 Identity = 189/229 (82.53%), Postives = 205/229 (89.52%), Query Frame = 0
BLAST of CSPI01G21500 vs. NCBI nr
Match: XP_022140053.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like [Momordica charantia]) HSP 1 Score: 348.2 bits (892), Expect = 5.3e-92 Identity = 187/229 (81.66%), Postives = 204/229 (89.08%), Query Frame = 0
BLAST of CSPI01G21500 vs. TAIR 10
Match: AT1G29390.1 (cold regulated 314 thylakoid membrane 2 ) HSP 1 Score: 231.1 bits (588), Expect = 8.8e-61 Identity = 130/231 (56.28%), Postives = 162/231 (70.13%), Query Frame = 0
BLAST of CSPI01G21500 vs. TAIR 10
Match: AT1G29395.1 (COLD REGULATED 314 INNER MEMBRANE 1 ) HSP 1 Score: 226.1 bits (575), Expect = 2.8e-59 Identity = 121/231 (52.38%), Postives = 167/231 (72.29%), Query Frame = 0
BLAST of CSPI01G21500 vs. TAIR 10
Match: AT1G29390.2 (cold regulated 314 thylakoid membrane 2 ) HSP 1 Score: 222.6 bits (566), Expect = 3.1e-58 Identity = 113/172 (65.70%), Postives = 139/172 (80.81%), Query Frame = 0
BLAST of CSPI01G21500 vs. TAIR 10
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family ) HSP 1 Score: 77.0 bits (188), Expect = 2.1e-14 Identity = 48/143 (33.57%), Postives = 80/143 (55.94%), Query Frame = 0
BLAST of CSPI01G21500 vs. TAIR 10
Match: AT2G15970.1 (cold regulated 413 plasma membrane 1 ) HSP 1 Score: 69.7 bits (169), Expect = 3.4e-12 Identity = 46/143 (32.17%), Postives = 77/143 (53.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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