Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACAGAATTCTGAGGTGCGCTCTTATAGTGGTTGTATAGTTAATGGAGTACGATTTCATACTACACAACTTGATAATCGTCGAACAACCCAAAATAGTAGAATTTTTGTGCTTGGAGAAAGTGAAGGTGATCAATATAATTTCTATGGTGTCTTAGACGAGGTGTTAGACTTTCAATATGTAAGAAGAAGACGTGTTATGATGTTGAAGTGTAGATGGTTTGACACTGACCCTAGAAAAAAAAAGATCGCACATAGATCTAGAGTTGACATCAATTAATACATCTCATTATTGGTATGTCGATAACCATTTCATTCTTGCCAATCAATTAAGCACAACAAGTTTTTTTTACCTCAAGGACCCTAAATATGGTATAAACTGGATAGTTGTTCAAATAGTTCAAAATAAATGCTTGTGGGATGTGTCGGAAGTTGGTGATATTGAGAATGACCAACTTGATGTAGCGGAAGTTGGTGGAATTGGAGTCGATGAATCAATTGATGATACCACATTCTGTAGAAATGACATTGAGCCTACACTCCTGGGACAACAATTACAGTCTCAAGACAACAACGTTGGATTCATAAATGATGAATCAGAAGATACACGATCATCTCCTGACATTAGCTCAAGATCTGATGAACTGCTTGAT
mRNA sequence
ATGGGACAGAATTCTGAGGTGCGCTCTTATAGTGGTTGTATAGTTAATGGAGTACGATTTCATACTACACAACTTGATAATCGTCGAACAACCCAAAATAGTAGAATTTTTGTGCTTGGAGAAAGTGAAGGTGATCAATATAATTTCTATGGTGTCTTAGACGAGGACCCTAAATATGGTATAAACTGGATAGTTGTTCAAATAGTTCAAAATAAATGCTTGTGGGATGTGTCGGAAGTTGGTGATATTGAGAATGACCAACTTGATGTAGCGGAAGTTGGTGGAATTGGAGTCGATGAATCAATTGATGATACCACATTCTGTAGAAATGACATTGAGCCTACACTCCTGGGACAACAATTACAGTCTCAAGACAACAACGTTGGATTCATAAATGATGAATCAGAAGATACACGATCATCTCCTGACATTAGCTCAAGATCTGATGAACTGCTTGAT
Coding sequence (CDS)
ATGGGACAGAATTCTGAGGTGCGCTCTTATAGTGGTTGTATAGTTAATGGAGTACGATTTCATACTACACAACTTGATAATCGTCGAACAACCCAAAATAGTAGAATTTTTGTGCTTGGAGAAAGTGAAGGTGATCAATATAATTTCTATGGTGTCTTAGACGAGGACCCTAAATATGGTATAAACTGGATAGTTGTTCAAATAGTTCAAAATAAATGCTTGTGGGATGTGTCGGAAGTTGGTGATATTGAGAATGACCAACTTGATGTAGCGGAAGTTGGTGGAATTGGAGTCGATGAATCAATTGATGATACCACATTCTGTAGAAATGACATTGAGCCTACACTCCTGGGACAACAATTACAGTCTCAAGACAACAACGTTGGATTCATAAATGATGAATCAGAAGATACACGATCATCTCCTGACATTAGCTCAAGATCTGATGAACTGCTTGAT
Protein sequence
MGQNSEVRSYSGCIVNGVRFHTTQLDNRRTTQNSRIFVLGESEGDQYNFYGVLDEDPKYGINWIVVQIVQNKCLWDVSEVGDIENDQLDVAEVGGIGVDESIDDTTFCRNDIEPTLLGQQLQSQDNNVGFINDESEDTRSSPDISSRSDELLD
Homology
BLAST of CSPI01G21000 vs. ExPASy TrEMBL
Match:
A0A5D3D342 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001130 PE=4 SV=1)
HSP 1 Score: 139.4 bits (350), Expect = 1.2e-29
Identity = 77/159 (48.43%), Postives = 103/159 (64.78%), Query Frame = 0
Query: 1 MGQNSEVRSYSGCIVNGVRFHTTQLDNRRTTQNSRIFVLGESE----GDQYNFYGVLDE- 60
MG + +VR Y+GCIV G+RFHT +LD+RRTTQNS I V+GES+ GD NFYGVLDE
Sbjct: 177 MGPSFDVRCYNGCIVGGIRFHTIELDSRRTTQNSGIMVIGESDASGTGDN-NFYGVLDEV 236
Query: 61 ----------DPKYGINWIVVQIVQNKCLWDVSEVGDIENDQLDVAE-VGGIGVDESIDD 120
DPK G NW VVQ++QNK +WDV EV D+END +++ E V VD+ I+D
Sbjct: 237 LHHIKFFYVDDPKNGSNWKVVQVIQNKRIWDVPEVEDVENDHINILEVVVSHQVDDHIED 296
Query: 121 TTFCRNDIEPTLLGQQLQSQDNNVGFINDESEDTRSSPD 144
T CRND++PT++ + + + FI+D E + D
Sbjct: 297 DTLCRNDVDPTIVERPVVRHVTD-NFIDDVDEHLSHASD 333
BLAST of CSPI01G21000 vs. ExPASy TrEMBL
Match:
A0A5D3BK73 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G001010 PE=4 SV=1)
HSP 1 Score: 137.9 bits (346), Expect = 3.6e-29
Identity = 71/147 (48.30%), Postives = 100/147 (68.03%), Query Frame = 0
Query: 1 MGQNSEVRSYSGCIVNGVRFHTTQLDNRRTTQNSRIFVLGESEGDQ---YNFYGVLDEDP 60
MGQ+ +VR Y+GCIV GVRFHT +LD+RRTTQNSRI ++G+S+ + NFY +DP
Sbjct: 333 MGQSFDVRCYNGCIVGGVRFHTIELDSRRTTQNSRIMIIGKSDASETSDNNFY----DDP 392
Query: 61 KYGINWIVVQIVQNKCLWDVSEVGDIENDQLDVAE-VGGIGVDESIDDTTFCRNDIEPTL 120
K GINW VVQ++QNK +WDV EV D++ND + + E V VD+ I+D T CRND++PT+
Sbjct: 393 KNGINWKVVQVIQNKRIWDVPEVEDVQNDHISILEVVVSHQVDDHIEDDTLCRNDVDPTI 452
Query: 121 LGQQLQSQDNNVGFINDESEDTRSSPD 144
+ + + + FI+D E + D
Sbjct: 453 IERPILRHVTD-DFIDDVDEHLSHASD 474
BLAST of CSPI01G21000 vs. ExPASy TrEMBL
Match:
A0A5A7SV41 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00460 PE=4 SV=1)
HSP 1 Score: 135.6 bits (340), Expect = 1.8e-28
Identity = 71/148 (47.97%), Postives = 91/148 (61.49%), Query Frame = 0
Query: 1 MGQNSEVRSYSGCIVNGVRFHTTQLDNRRTTQNSRIFVLGE---SEGDQYNFYGVLDE-- 60
MG + VR Y+GCIV GVRFHT +LD+RRTTQNS I V+GE SE + NFYGVLDE
Sbjct: 426 MGPSFNVRCYNGCIVGGVRFHTIELDSRRTTQNSGIMVIGESDASETSENNFYGVLDEVL 485
Query: 61 -------------------------DPKYGINWIVVQIVQNKCLWDVSEVGDIENDQLDV 118
DPK G NW VVQ++QNKC+WDV EV D++ND +++
Sbjct: 486 HVQYPSGRNVWLFKCRWYDTDINKNDPKNGSNWKVVQVIQNKCIWDVPEVEDVQNDHINI 545
BLAST of CSPI01G21000 vs. ExPASy TrEMBL
Match:
A0A5A7SVV9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G001050 PE=4 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 3.0e-28
Identity = 81/182 (44.51%), Postives = 107/182 (58.79%), Query Frame = 0
Query: 1 MGQNSEVRSYSGCIVNGVRFHTTQLDNRRTTQNSRIFVLGESE----GDQYNFYGVLDE- 60
MG + +VR Y+GCIV GVRFHT +LD+RRTTQNS I V+GES+ GD NFYGVLDE
Sbjct: 1637 MGPSFDVRCYNGCIVGGVRFHTIELDSRRTTQNSGITVIGESDASGTGDN-NFYGVLDEV 1696
Query: 61 ------------------------DPKYGINWIVVQIVQNKCLWDVSEVGDIENDQLDVA 120
DPK G NW VVQ++QNK +WDV EV D++ND +++
Sbjct: 1697 LHVQYPLGRNVWLFKCQWYDTDVDDPKNGSNWKVVQVIQNKRIWDVPEVEDVQNDHINIV 1756
Query: 121 E-VGGIGVDESIDDTTFCRNDIEPTLLGQQLQSQDNNVGFINDESEDTRSSPDISSRSDE 153
E V VD+ I+D T CRND++PT++ + + VG + D+ D +S SDE
Sbjct: 1757 EVVVSHQVDDHIEDDTLCRNDVDPTIVERPV------VGHVTDDFID-NVDEHLSHASDE 1810
BLAST of CSPI01G21000 vs. ExPASy TrEMBL
Match:
A0A5D3BNX2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00990 PE=4 SV=1)
HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27
Identity = 69/141 (48.94%), Postives = 97/141 (68.79%), Query Frame = 0
Query: 1 MGQNSEVRSYSGCIVNGVRFHTTQLDNRRTTQNSRIFVLGESEGD---QYNFYGVLDE-D 60
MG + +VR Y+GCIV+G+RFHT +LD+RRTTQNS + V+GES+ NFYG+LDE
Sbjct: 157 MGPSFDVRCYNGCIVSGLRFHTVELDSRRTTQNSGVMVIGESDASGTGNNNFYGILDEVY 216
Query: 61 PKYGINWIVVQIVQNKCLWDVSEVGDIENDQLDVAE-VGGIGVDESIDDTTFCRNDIEPT 120
PK G NW VVQ+VQNK +WD+ EV D++ND ++V E V VD+ I+D T CR D++P
Sbjct: 217 PKNGSNWKVVQVVQNKRIWDMPEVEDVQNDHINVLESVVSHQVDDHIEDDTLCRTDVDPI 276
Query: 121 LLGQQLQSQDNNVGFINDESE 137
++ + + + FI+D E
Sbjct: 277 IVERPI-VRHVTYDFIDDVDE 296
BLAST of CSPI01G21000 vs. NCBI nr
Match:
KAA0046643.1 (hypothetical protein E6C27_scaffold427G00020 [Cucumis melo var. makuwa] >TYK18180.1 hypothetical protein E5676_scaffold411G001130 [Cucumis melo var. makuwa])
HSP 1 Score: 139.4 bits (350), Expect = 2.5e-29
Identity = 77/159 (48.43%), Postives = 103/159 (64.78%), Query Frame = 0
Query: 1 MGQNSEVRSYSGCIVNGVRFHTTQLDNRRTTQNSRIFVLGESE----GDQYNFYGVLDE- 60
MG + +VR Y+GCIV G+RFHT +LD+RRTTQNS I V+GES+ GD NFYGVLDE
Sbjct: 177 MGPSFDVRCYNGCIVGGIRFHTIELDSRRTTQNSGIMVIGESDASGTGDN-NFYGVLDEV 236
Query: 61 ----------DPKYGINWIVVQIVQNKCLWDVSEVGDIENDQLDVAE-VGGIGVDESIDD 120
DPK G NW VVQ++QNK +WDV EV D+END +++ E V VD+ I+D
Sbjct: 237 LHHIKFFYVDDPKNGSNWKVVQVIQNKRIWDVPEVEDVENDHINILEVVVSHQVDDHIED 296
Query: 121 TTFCRNDIEPTLLGQQLQSQDNNVGFINDESEDTRSSPD 144
T CRND++PT++ + + + FI+D E + D
Sbjct: 297 DTLCRNDVDPTIVERPVVRHVTD-NFIDDVDEHLSHASD 333
BLAST of CSPI01G21000 vs. NCBI nr
Match:
TYJ99703.1 (putative transposase [Cucumis melo var. makuwa])
HSP 1 Score: 137.9 bits (346), Expect = 7.4e-29
Identity = 71/147 (48.30%), Postives = 100/147 (68.03%), Query Frame = 0
Query: 1 MGQNSEVRSYSGCIVNGVRFHTTQLDNRRTTQNSRIFVLGESEGDQ---YNFYGVLDEDP 60
MGQ+ +VR Y+GCIV GVRFHT +LD+RRTTQNSRI ++G+S+ + NFY +DP
Sbjct: 333 MGQSFDVRCYNGCIVGGVRFHTIELDSRRTTQNSRIMIIGKSDASETSDNNFY----DDP 392
Query: 61 KYGINWIVVQIVQNKCLWDVSEVGDIENDQLDVAE-VGGIGVDESIDDTTFCRNDIEPTL 120
K GINW VVQ++QNK +WDV EV D++ND + + E V VD+ I+D T CRND++PT+
Sbjct: 393 KNGINWKVVQVIQNKRIWDVPEVEDVQNDHISILEVVVSHQVDDHIEDDTLCRNDVDPTI 452
Query: 121 LGQQLQSQDNNVGFINDESEDTRSSPD 144
+ + + + FI+D E + D
Sbjct: 453 IERPILRHVTD-DFIDDVDEHLSHASD 474
BLAST of CSPI01G21000 vs. NCBI nr
Match:
KAA0033025.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK03442.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 135.6 bits (340), Expect = 3.7e-28
Identity = 71/148 (47.97%), Postives = 91/148 (61.49%), Query Frame = 0
Query: 1 MGQNSEVRSYSGCIVNGVRFHTTQLDNRRTTQNSRIFVLGE---SEGDQYNFYGVLDE-- 60
MG + VR Y+GCIV GVRFHT +LD+RRTTQNS I V+GE SE + NFYGVLDE
Sbjct: 426 MGPSFNVRCYNGCIVGGVRFHTIELDSRRTTQNSGIMVIGESDASETSENNFYGVLDEVL 485
Query: 61 -------------------------DPKYGINWIVVQIVQNKCLWDVSEVGDIENDQLDV 118
DPK G NW VVQ++QNKC+WDV EV D++ND +++
Sbjct: 486 HVQYPSGRNVWLFKCRWYDTDINKNDPKNGSNWKVVQVIQNKCIWDVPEVEDVQNDHINI 545
BLAST of CSPI01G21000 vs. NCBI nr
Match:
KAA0033295.1 (hypothetical protein E6C27_scaffold845G001050 [Cucumis melo var. makuwa])
HSP 1 Score: 134.8 bits (338), Expect = 6.2e-28
Identity = 81/182 (44.51%), Postives = 107/182 (58.79%), Query Frame = 0
Query: 1 MGQNSEVRSYSGCIVNGVRFHTTQLDNRRTTQNSRIFVLGESE----GDQYNFYGVLDE- 60
MG + +VR Y+GCIV GVRFHT +LD+RRTTQNS I V+GES+ GD NFYGVLDE
Sbjct: 1637 MGPSFDVRCYNGCIVGGVRFHTIELDSRRTTQNSGITVIGESDASGTGDN-NFYGVLDEV 1696
Query: 61 ------------------------DPKYGINWIVVQIVQNKCLWDVSEVGDIENDQLDVA 120
DPK G NW VVQ++QNK +WDV EV D++ND +++
Sbjct: 1697 LHVQYPLGRNVWLFKCQWYDTDVDDPKNGSNWKVVQVIQNKRIWDVPEVEDVQNDHINIV 1756
Query: 121 E-VGGIGVDESIDDTTFCRNDIEPTLLGQQLQSQDNNVGFINDESEDTRSSPDISSRSDE 153
E V VD+ I+D T CRND++PT++ + + VG + D+ D +S SDE
Sbjct: 1757 EVVVSHQVDDHIEDDTLCRNDVDPTIVERPV------VGHVTDDFID-NVDEHLSHASDE 1810
BLAST of CSPI01G21000 vs. NCBI nr
Match:
TYK01403.1 (uncharacterized protein E5676_scaffold29G00990 [Cucumis melo var. makuwa])
HSP 1 Score: 132.9 bits (333), Expect = 2.4e-27
Identity = 69/141 (48.94%), Postives = 97/141 (68.79%), Query Frame = 0
Query: 1 MGQNSEVRSYSGCIVNGVRFHTTQLDNRRTTQNSRIFVLGESEGD---QYNFYGVLDE-D 60
MG + +VR Y+GCIV+G+RFHT +LD+RRTTQNS + V+GES+ NFYG+LDE
Sbjct: 157 MGPSFDVRCYNGCIVSGLRFHTVELDSRRTTQNSGVMVIGESDASGTGNNNFYGILDEVY 216
Query: 61 PKYGINWIVVQIVQNKCLWDVSEVGDIENDQLDVAE-VGGIGVDESIDDTTFCRNDIEPT 120
PK G NW VVQ+VQNK +WD+ EV D++ND ++V E V VD+ I+D T CR D++P
Sbjct: 217 PKNGSNWKVVQVVQNKRIWDMPEVEDVQNDHINVLESVVSHQVDDHIEDDTLCRTDVDPI 276
Query: 121 LLGQQLQSQDNNVGFINDESE 137
++ + + + FI+D E
Sbjct: 277 IVERPI-VRHVTYDFIDDVDE 296
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3D342 | 1.2e-29 | 48.43 | DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5D3BK73 | 3.6e-29 | 48.30 | Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562... | [more] |
A0A5A7SV41 | 1.8e-28 | 47.97 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
A0A5A7SVV9 | 3.0e-28 | 44.51 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3BNX2 | 1.1e-27 | 48.94 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0046643.1 | 2.5e-29 | 48.43 | hypothetical protein E6C27_scaffold427G00020 [Cucumis melo var. makuwa] >TYK1818... | [more] |
TYJ99703.1 | 7.4e-29 | 48.30 | putative transposase [Cucumis melo var. makuwa] | [more] |
KAA0033025.1 | 3.7e-28 | 47.97 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK03442.1 CACTA en-... | [more] |
KAA0033295.1 | 6.2e-28 | 44.51 | hypothetical protein E6C27_scaffold845G001050 [Cucumis melo var. makuwa] | [more] |
TYK01403.1 | 2.4e-27 | 48.94 | uncharacterized protein E5676_scaffold29G00990 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |