CSPI01G20360 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G20360
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionU4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
LocationChr1: 16042084 .. 16044769 (-)
RNA-Seq ExpressionCSPI01G20360
SyntenyCSPI01G20360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACTCTGAGCTTACGGAATCGGAAATTCTTACAAATCCGCTATGGTCGACCGTGAACGAGACAGAGATAGAGGCCGCGACAGAGATAAAGATCGGGACCGTGATAGATACAAAGACCGGGAGCGAGACCGTGACCATCGGGAACGTGACCGGCGTAGGGATCGAGAAGATCGTGACCACCGTGAACGTGATCGGGACCGGGAACGCCGTAGGGATCAGGACGATCGTGACCGTGAAAGGGAGCGTGGCCGGAGTAAAAGGTCACTCACTCCCGACCGCTCAAGATCCCGCCGCTCCCGCACCCGCTCGCCGGACCGGCACCGGTCGCGGTCTCTTTCTCGTACTCCCGAGGACCGGCCATCTCGCCGCCGCCATCGTTCTCCTTCCCCGGATCATGCTCGGAAGCGTCATCGCCGGGATTTGACTGCGGATGACGAAAAGGAGCGGCAGAAAGCAGTTTCTGACTTTGTTGATGGCATTGCGAAAGAGCAGCACAAGCAGAAGAATAATAAAGACAACGTTGGTGGCGGAGAAGTAGTGGAGGAGGCCATGGCTGATGAAGATGAAATGGAGATGATGAAGAAATTAGGTATTCCCGTGGGTTTCGATTCGACCAAGGGCAAACCTGTCCCAGGTGCTGATGTGAGTGGCGTTAGGGTAGTTACCAAGAGGCAGCCTAGGCAGTACATGAATCGTCGTGGAGGGTTCAACAGGCCGTTGCCGGCCGAGCGCAGCCGGTAGCTAATATATTTGGCTAGGTCACTGAGGTTAGTCTATTGAACTGTTATTGGGATTTCTTAGCTCCGCCGTATTAAACTGTTGCAACAATTGAATAGCTTAGTCCACTGTCTTCTACTTGACATTCGGTTTTAGTAGTCCGATTAATGTTAATTCATTGTGCACTGTGTTTTTATGCTCCAGTTCCTAGTCACTTATAGTATTCTAGATGTTCAATGGGGTAGATGAGTATCTCGTCATTGTTGAGGATCTGACTAAAGTATTTGACATCTTTACTCCTGAAAATGCTCCTTAGAGAGAACACTAATTTCTTTGTCAATTTCATGTGTTTAAGATGGGTTTTAGACTAATGTTACCAGTAGTTAGTAGTTACTTAACGTTAGAGGTATGAACTTTTCACACATTTCTAAATATCACCAAACAGTTAGAACTTCATTGCCACCATTTTTTTGTACAATGGTTGAAGGTCATATTCTGCCTAGTATTATCAAAGAGAACTTGAAGGACCCAAAATTTTGTTGAACGTATTTTTGGCATTTAGTTTTTGAAGTTATAATTATAAAATTCTTAATCCAGTTGAGGAAACATTGTGATGTACTTCTTTGGATGTGTTATAGGGCCGGGGCTTTTTGTATCAAAATATTGAGCTTATGTGTATGGTAGCTGGGCATGCGAATTTCTTGTGTGAGATAGTTTGTTTATGTTATTTGAGCCAACAGTTGATGGAAGTTCAAAAGTGATGAATTTAGGAATATATTCAGACTTGCTGATATATGAAAATATGATTTAGTTTTTCATTAAAACAAAGAAAAGATTTAGGAGCTGTTGCCTGAAACTTACAAAGATGGTAAAATAATGATATAGCTCTCCCGTGCTTCAGTGTAGCAACCAAGACTGACATTCTTCCTGAGATATCATTGAGCGGTGGGAGATAAATGCAGACCAGGCTATTGCAATGTGCTCGAGCATATTCTGGTAATAAAATCTTGTTACTGAATGTGTTTCCTGCTTAACCTGAAGTTTTGATATAGCTTGATTCGGATTTCAAATCCTCCCCTATCTTAGGGGACGCCTTGTGATTGTGAGTTCTTAGGGGTCCGCCTTGTGATTGTGAGTTCCAAAGACTTCCATCTGGTTTCTCAAATTAAAACTCACCCATATAGTTTGTGAGTGATTCAAGAGTTTGTGTGTAGATCCTTTAAGCACCCATTTAAACATAATCCTTTTTAGTTGCCAATTGCAAACACTCCTGCAATAACCTTTAGGTGCTTTGAAGTTTTCAGTTGATTTCATTTATCAATGAAATGTTTCTTTATCCCGAAAAAAAGTAACTAACAGCATAAACATCTGTGTGGGTGTCTGTTTATCGTCGCATTCTTCTAGATTGAAGTTTATTCTAGTATTTTATCAGTGCTGGGTTCCTTATAATAAAAAGTTTTTTTTATGTACTCTTTATTTCATGTCAAGCTAGTTCCTTTCTTTTATTTAGTAATATTATCATTTACTAATGTCCGTTCAATGACACTAGTTGAACCCGTTTTTGGTTTCTGCAGGATTTTGGTTTGCTTGACTTTGCTGGAGAGGCCAGATGGAAGTCTTTGGGCACAGTATTGTTTGTATGTAATATATATTCATGAAACCTTAGAATTCGAGTCGAGTTGAGTTAATTGATACTCGAAGAACGAGGGATATTTTTGGCTATTGTAGAAATTGGAGAATTTTCTATGTTGCTTATTTGTTTTCAGTAAAAAATGGATAGTGCTTAGATCAATTGAATTGGATTTGGTTCCTCCAAACTTGAGATTAGAGCTTTTCACAAAGGCCCGCTAACGTGCGAACACAGAAAATTTACAATCAGTTACACCAAGCAATTGCCATCACTGCTGCGAAAGCCATGCAATGCAAAAGCCGTTATAAAGCCA

mRNA sequence

CACTCTGAGCTTACGGAATCGGAAATTCTTACAAATCCGCTATGGTCGACCGTGAACGAGACAGAGATAGAGGCCGCGACAGAGATAAAGATCGGGACCGTGATAGATACAAAGACCGGGAGCGAGACCGTGACCATCGGGAACGTGACCGGCGTAGGGATCGAGAAGATCGTGACCACCGTGAACGTGATCGGGACCGGGAACGCCGTAGGGATCAGGACGATCGTGACCGTGAAAGGGAGCGTGGCCGGAGTAAAAGGTCACTCACTCCCGACCGCTCAAGATCCCGCCGCTCCCGCACCCGCTCGCCGGACCGGCACCGGTCGCGGTCTCTTTCTCGTACTCCCGAGGACCGGCCATCTCGCCGCCGCCATCGTTCTCCTTCCCCGGATCATGCTCGGAAGCGTCATCGCCGGGATTTGACTGCGGATGACGAAAAGGAGCGGCAGAAAGCAGTTTCTGACTTTGTTGATGGCATTGCGAAAGAGCAGCACAAGCAGAAGAATAATAAAGACAACGTTGGTGGCGGAGAAGTAGTGGAGGAGGCCATGGCTGATGAAGATGAAATGGAGATGATGAAGAAATTAGGTATTCCCGTGGGTTTCGATTCGACCAAGGGCAAACCTGTCCCAGGTGCTGATGTGAGTGGCGTTAGGGTAGTTACCAAGAGGCAGCCTAGGCAGTACATGAATCGTCGTGGAGGGTTCAACAGGCCGTTGCCGGCCGAGCGCAGCCGGTAGCTAATATATTTGGCTAGGTCACTGAGTGTAGCAACCAAGACTGACATTCTTCCTGAGATATCATTGAGCGGTGGGAGATAAATGCAGACCAGGCTATTGCAATGTGCTCGAGCATATTCTGGATTTTGGTTTGCTTGACTTTGCTGGAGAGGCCAGATGGAAGTCTTTGGGCACAGTATTGTTTGTATGTAATATATATTCATGAAACCTTAGAATTCGAGTCGAGTTGAGTTAATTGATACTCGAAGAACGAGGGATATTTTTGGCTATTGTAGAAATTGGAGAATTTTCTATGTTGCTTATTTGTTTTCAGTAAAAAATGGATAGTGCTTAGATCAATTGAATTGGATTTGGTTCCTCCAAACTTGAGATTAGAGCTTTTCACAAAGGCCCGCTAACGTGCGAACACAGAAAATTTACAATCAGTTACACCAAGCAATTGCCATCACTGCTGCGAAAGCCATGCAATGCAAAAGCCGTTATAAAGCCA

Coding sequence (CDS)

ATGGTCGACCGTGAACGAGACAGAGATAGAGGCCGCGACAGAGATAAAGATCGGGACCGTGATAGATACAAAGACCGGGAGCGAGACCGTGACCATCGGGAACGTGACCGGCGTAGGGATCGAGAAGATCGTGACCACCGTGAACGTGATCGGGACCGGGAACGCCGTAGGGATCAGGACGATCGTGACCGTGAAAGGGAGCGTGGCCGGAGTAAAAGGTCACTCACTCCCGACCGCTCAAGATCCCGCCGCTCCCGCACCCGCTCGCCGGACCGGCACCGGTCGCGGTCTCTTTCTCGTACTCCCGAGGACCGGCCATCTCGCCGCCGCCATCGTTCTCCTTCCCCGGATCATGCTCGGAAGCGTCATCGCCGGGATTTGACTGCGGATGACGAAAAGGAGCGGCAGAAAGCAGTTTCTGACTTTGTTGATGGCATTGCGAAAGAGCAGCACAAGCAGAAGAATAATAAAGACAACGTTGGTGGCGGAGAAGTAGTGGAGGAGGCCATGGCTGATGAAGATGAAATGGAGATGATGAAGAAATTAGGTATTCCCGTGGGTTTCGATTCGACCAAGGGCAAACCTGTCCCAGGTGCTGATGTGAGTGGCGTTAGGGTAGTTACCAAGAGGCAGCCTAGGCAGTACATGAATCGTCGTGGAGGGTTCAACAGGCCGTTGCCGGCCGAGCGCAGCCGGTAG

Protein sequence

MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR*
Homology
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BLAST of CSPI01G20360 vs. ExPASy Swiss-Prot
Match: Q8K194 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Mus musculus OX=10090 GN=Snrnp27 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.6e-09
Identity = 81/195 (41.54%), Postives = 100/195 (51.28%), Query Frame = 0 

Query: 33  RERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDR 92
           R R R   RE R  R   RDRERRR +  R RER+R              RRSR+RSP R
Sbjct: 3   RSRSRSPRRERRRSRSTSRDRERRRRERSRSRERDR--------------RRSRSRSPHR 62

Query: 93  HRSRSLSRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHK 152
            RSR          S RRHRS SP  +R + RR    D+EK+  K +        K + +
Sbjct: 63  RRSR----------SPRRHRSTSPSPSRLKERR----DEEKKETKEI--------KNKER 122

Query: 153 QKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQ 212
           Q   +D  G           E+E+EMMK +G    FDSTKGK V G+ +   + V  KR+
Sbjct: 123 QITEEDLEG---------KTEEEIEMMKLMGF-ASFDSTKGKKVDGSVNAYAINVSQKRK 151

Query: 213 PRQYMNRRGGFNRPL 227
            RQYMNR+GGFNRPL
Sbjct: 183 YRQYMNRKGGFNRPL 151

[Close]
BLAST of CSPI01G20360 vs. ExPASy Swiss-Prot
Match: Q8WVK2 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP27 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.9e-08
Identity = 80/195 (41.03%), Postives = 99/195 (50.77%), Query Frame = 0 

Query: 33  RERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDR 92
           R R R   RE R  R   R+RERRR +  R RER+R              RRSR+RSP R
Sbjct: 3   RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDR--------------RRSRSRSPHR 62

Query: 93  HRSRSLSRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHK 152
            RSR          S RRHRS SP  +R + RR    D+EK+  K          K + +
Sbjct: 63  RRSR----------SPRRHRSTSPSPSRLKERR----DEEKKETKE--------TKSKER 122

Query: 153 QKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQ 212
           Q   +D  G           E+E+EMMK +G    FDSTKGK V G+ +   + V  KR+
Sbjct: 123 QITEEDLEG---------KTEEEIEMMKLMGF-ASFDSTKGKKVDGSVNAYAINVSQKRK 151

Query: 213 PRQYMNRRGGFNRPL 227
            RQYMNR+GGFNRPL
Sbjct: 183 YRQYMNRKGGFNRPL 151

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BLAST of CSPI01G20360 vs. ExPASy Swiss-Prot
Match: Q6GLZ8 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Xenopus laevis OX=8355 GN=snrnp27 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.4e-07
Identity = 76/197 (38.58%), Postives = 97/197 (49.24%), Query Frame = 0 

Query: 37  RRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSR 96
           R R R     RER R R   R+++ R RER R R +          RRSR+RSP R RSR
Sbjct: 3   RSRSRSPERRRERRRSRSASRERERRRRERSRSRER----------RRSRSRSPHRRRSR 62

Query: 97  SLSRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNN 156
                     S RRHRS S   +R + RRD   DD+KE                      
Sbjct: 63  ----------SPRRHRSSSISPSRLKDRRD---DDKKE---------------------P 122

Query: 157 KDNVGGGEVVEEAMAD------EDEMEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTK 216
           K++ GGG    +  A+      E+E+EMMK +G    FDS+KGK   G+ +   + V  K
Sbjct: 123 KESKGGGSKERQLAAEDLEGKTEEEIEMMKLMGF-ASFDSSKGKKTDGSVNAYAINVSQK 154

Query: 217 RQPRQYMNRRGGFNRPL 227
           R+ RQYMNR+GGFNRPL
Sbjct: 183 RKYRQYMNRKGGFNRPL 154

[Close]
BLAST of CSPI01G20360 vs. ExPASy Swiss-Prot
Match: Q6DDA4 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Xenopus tropicalis OX=8364 GN=snrnp27 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.8e-06
Identity = 74/191 (38.74%), Postives = 96/191 (50.26%), Query Frame = 0 

Query: 37  RRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSR 96
           R R R     RER R R   R+++ R RER R R +          RRSR+RSP R RSR
Sbjct: 3   RSRSRSPERRRERRRSRSASRERERRRRERSRSRER----------RRSRSRSPHRRRSR 62

Query: 97  SLSRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNN 156
                     S RRHRS S    R + RRD   DD+K+ +++       IA E  + K  
Sbjct: 63  ----------SPRRHRSSSISPGRLKDRRD---DDKKDSKESKGAKERQIAAEDLEGKT- 122

Query: 157 KDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQY 216
                           E+E+EMMK +G    FD++KGK V G+ +   + V  KR+ RQY
Sbjct: 123 ----------------EEEIEMMKMMGFAT-FDTSKGKKVDGSVNAYAINVSQKRKYRQY 152

Query: 217 MNRRGGFNRPL 227
           MNR+GGFNRPL
Sbjct: 183 MNRKGGFNRPL 152

[Close]
BLAST of CSPI01G20360 vs. ExPASy Swiss-Prot
Match: Q6DH74 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Danio rerio OX=7955 GN=snrnp27 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 83/202 (41.09%), Postives = 100/202 (49.50%), Query Frame = 0 

Query: 26  RERDRDHRERDRRRDREDRDHRERDRDRERRRDQDDRDRERERGRSKRSLTPDRSRSRRS 85
           R R R    R+RRR R         RDRERRR      RERER RS+     DR R RRS
Sbjct: 3   RSRSRTPPRRERRRSRSS------SRDRERRR------RERERSRSR-----DRDR-RRS 62

Query: 86  RTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDG 145
           R+RSP R RSR          S RRHRS S    R++ RRD    D KE+   V      
Sbjct: 63  RSRSPHRRRSR----------SPRRHRSSSLSPLRQKDRRDDDRKDVKEKPAKVHQ---- 122

Query: 146 IAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIPVGFDSTKGKPVPGA-DVSGV 205
           I+ E  + K                  E+E+EMMK +G    F+++KGK   G+     V
Sbjct: 123 ISAEDMQGKT-----------------EEEIEMMKLMGFG-SFETSKGKKKDGSIKAFAV 154

Query: 206 RVVTKRQPRQYMNRRGGFNRPL 227
            V  KR+ RQYMNR+GGFNRPL
Sbjct: 183 NVSQKRKYRQYMNRKGGFNRPL 154

[Close]
BLAST of CSPI01G20360 vs. ExPASy TrEMBL
Match: A0A0A0LU61 (SNRNP27 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G423230 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0 

Query: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60
           MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60

Query: 61  DRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHAR 120
           DRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHAR
Sbjct: 61  DRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHAR 120

Query: 121 KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMK 180
           KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMK
Sbjct: 121 KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMK 180

Query: 181 KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 233
           KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
Sbjct: 181 KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 232

[Close]
BLAST of CSPI01G20360 vs. ExPASy TrEMBL
Match: A0A5D3CK71 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00330 PE=3 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 4.4e-103
Identity = 225/232 (96.98%), Postives = 227/232 (97.84%), Query Frame = 0 

Query: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60
           MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRD D
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDLD 60

Query: 61  DRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHAR 120
           DRDRERERGRSKRS TPDRSRSRRSRTRSPDRHRSRSLSRTPEDR SRRRHRSPSPDHAR
Sbjct: 61  DRDRERERGRSKRSHTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHAR 120

Query: 121 KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMK 180
           KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDN G GEVVEEAMADEDE+EMMK
Sbjct: 121 KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNAGSGEVVEEAMADEDEIEMMK 180

Query: 181 KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 233
           KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAER+R
Sbjct: 181 KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 232

[Close]
BLAST of CSPI01G20360 vs. ExPASy TrEMBL
Match: A0A1S3BW27 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Cucumis melo OX=3656 GN=LOC103494258 PE=3 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 4.4e-103
Identity = 225/232 (96.98%), Postives = 227/232 (97.84%), Query Frame = 0 

Query: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60
           MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRD D
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDLD 60

Query: 61  DRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHAR 120
           DRDRERERGRSKRS TPDRSRSRRSRTRSPDRHRSRSLSRTPEDR SRRRHRSPSPDHAR
Sbjct: 61  DRDRERERGRSKRSHTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHAR 120

Query: 121 KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMK 180
           KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDN G GEVVEEAMADEDE+EMMK
Sbjct: 121 KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNAGSGEVVEEAMADEDEIEMMK 180

Query: 181 KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 233
           KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAER+R
Sbjct: 181 KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 232

[Close]
BLAST of CSPI01G20360 vs. ExPASy TrEMBL
Match: A0A6J1L1Y6 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like OS=Cucurbita maxima OX=3661 GN=LOC111499666 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.3e-88
Identity = 201/234 (85.90%), Postives = 212/234 (90.60%), Query Frame = 0 

Query: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60
           MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERD          R+RDR+RERRRD+D
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERD----------RDRDRERERRRDRD 60

Query: 61  DRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDH 120
           DRDRERERGRSKRS TPDR RSR  RSRTRSPD+HR+RSLSR+PEDR  RRRHRSPSP+H
Sbjct: 61  DRDRERERGRSKRSHTPDRLRSRHTRSRTRSPDQHRTRSLSRSPEDRSLRRRHRSPSPEH 120

Query: 121 ARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEM 180
           ARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKD VGG EVVEEA+ADEDE+EM
Sbjct: 121 ARKRHRRDLTVDDDKERQKVVSDFVDGIAKEQHKQKKNKDRVGGEEVVEEAVADEDEIEM 180

Query: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 233
           MKKLGIPVGFDSTKGKPVPGADVSGVR VTKRQPRQYMNRRGGFNRPLPAER+R
Sbjct: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR 224

[Close]
BLAST of CSPI01G20360 vs. ExPASy TrEMBL
Match: A0A6J1C0K3 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Momordica charantia OX=3673 GN=LOC111007178 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 6.8e-88
Identity = 204/238 (85.71%), Postives = 209/238 (87.82%), Query Frame = 0 

Query: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60
           MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRE                RDRERRRD+D
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRE----------------RDRERRRDRD 60

Query: 61  DRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDH 120
           DRDRERERGRSKRS TPDR+RSR  RSRTRSPDRHRSRSLSRTPEDR  RRRHR+PSP+H
Sbjct: 61  DRDRERERGRSKRSHTPDRTRSRHTRSRTRSPDRHRSRSLSRTPEDRSGRRRHRTPSPEH 120

Query: 121 ARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNV----GGGEVVEEAMADED 180
           ARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQK NKD      GGGEVVEEAMADED
Sbjct: 121 ARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKKNKDGSGGGGGGGEVVEEAMADED 180

Query: 181 EMEMMKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 233
           E+EMMKKLGIPVGFDSTKGKPV GADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
Sbjct: 181 EIEMMKKLGIPVGFDSTKGKPVAGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 222

[Close]
BLAST of CSPI01G20360 vs. NCBI nr
Match: XP_004146322.1 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis sativus] >KGN65465.1 hypothetical protein Csa_019811 [Cucumis sativus])

HSP 1 Score: 399.1 bits (1024), Expect = 2.7e-107
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0 

Query: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60
           MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60

Query: 61  DRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHAR 120
           DRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHAR
Sbjct: 61  DRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHAR 120

Query: 121 KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMK 180
           KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMK
Sbjct: 121 KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMK 180

Query: 181 KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 233
           KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR
Sbjct: 181 KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 232

[Close]
BLAST of CSPI01G20360 vs. NCBI nr
Match: XP_008453595.1 (PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo] >KAA0058267.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo var. makuwa] >TYK11820.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 384.0 bits (985), Expect = 9.0e-103
Identity = 225/232 (96.98%), Postives = 227/232 (97.84%), Query Frame = 0 

Query: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60
           MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRD D
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDLD 60

Query: 61  DRDRERERGRSKRSLTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDHAR 120
           DRDRERERGRSKRS TPDRSRSRRSRTRSPDRHRSRSLSRTPEDR SRRRHRSPSPDHAR
Sbjct: 61  DRDRERERGRSKRSHTPDRSRSRRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHAR 120

Query: 121 KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMK 180
           KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDN G GEVVEEAMADEDE+EMMK
Sbjct: 121 KRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNAGSGEVVEEAMADEDEIEMMK 180

Query: 181 KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 233
           KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAER+R
Sbjct: 181 KLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 232

[Close]
BLAST of CSPI01G20360 vs. NCBI nr
Match: KAG6589703.1 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023383.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 343.2 bits (879), Expect = 1.8e-90
Identity = 208/234 (88.89%), Postives = 216/234 (92.31%), Query Frame = 0 

Query: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60
           MVDRERDRDRGRDRDKDRDRDRY DRERDRD+RERDRRRDRED     RDRDRERRR++D
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDRED-----RDRDRERRREKD 60

Query: 61  DRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDH 120
           DRD ERERGR KRS TP+R RSR  RSRTRSPDRHRSRSLSRTPEDR  RRRHRSPSPDH
Sbjct: 61  DRDHERERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPDH 120

Query: 121 ARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEM 180
            RKRHRRDLTADDEK+RQKAVSDFVDGIAKEQHKQKNNKD+VGGGE VEEAMADEDE+EM
Sbjct: 121 VRKRHRRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEM 180

Query: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 233
           MKKLGIPVGFDSTKGKPV GADVSGVR VTKRQPRQYMNRRGGFNRPLPAER+R
Sbjct: 181 MKKLGIPVGFDSTKGKPVAGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR 229

[Close]
BLAST of CSPI01G20360 vs. NCBI nr
Match: XP_023530476.1 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo] >XP_023530477.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo] >XP_023530478.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo] >XP_023530479.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.1 bits (858), Expect = 4.8e-88
Identity = 201/234 (85.90%), Postives = 212/234 (90.60%), Query Frame = 0 

Query: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60
           MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERD          R+RDR+RERRRD++
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERD----------RDRDRERERRRDRE 60

Query: 61  DRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDH 120
           DRDRERERGRSKRS TPDR RSR  RSRTRSPDRHR+RSLSR+PEDR  RRRHRSPSP+H
Sbjct: 61  DRDRERERGRSKRSHTPDRLRSRHTRSRTRSPDRHRTRSLSRSPEDRSLRRRHRSPSPEH 120

Query: 121 ARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEM 180
           ARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKD VGG EVVEEA+ADEDE+EM
Sbjct: 121 ARKRHRRDLTVDDDKERQKVVSDFVDGIAKEQHKQKKNKDGVGGEEVVEEAVADEDEIEM 180

Query: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 233
           MKKLGIPVGFDSTKGKPVPGADVSGVR VTKRQPRQYMNRRGGFNRPLPAER+R
Sbjct: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR 224

[Close]
BLAST of CSPI01G20360 vs. NCBI nr
Match: XP_023007065.1 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita maxima] >XP_023007073.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita maxima])

HSP 1 Score: 335.1 bits (858), Expect = 4.8e-88
Identity = 201/234 (85.90%), Postives = 212/234 (90.60%), Query Frame = 0 

Query: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60
           MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERD          R+RDR+RERRRD+D
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERD----------RDRDRERERRRDRD 60

Query: 61  DRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDH 120
           DRDRERERGRSKRS TPDR RSR  RSRTRSPD+HR+RSLSR+PEDR  RRRHRSPSP+H
Sbjct: 61  DRDRERERGRSKRSHTPDRLRSRHTRSRTRSPDQHRTRSLSRSPEDRSLRRRHRSPSPEH 120

Query: 121 ARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEM 180
           ARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKD VGG EVVEEA+ADEDE+EM
Sbjct: 121 ARKRHRRDLTVDDDKERQKVVSDFVDGIAKEQHKQKKNKDRVGGEEVVEEAVADEDEIEM 180

Query: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 233
           MKKLGIPVGFDSTKGKPVPGADVSGVR VTKRQPRQYMNRRGGFNRPLPAER+R
Sbjct: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR 224

[Close]
BLAST of CSPI01G20360 vs. TAIR 10
Match: AT5G57370.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1777 (InterPro:IPR013957); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 149.8 bits (377), Expect = 2.7e-36
Identity = 127/227 (55.95%), Postives = 157/227 (69.16%), Query Frame = 0 

Query: 19  DRDRYKDRERDRDHR-ERDRRRDREDRDHRERDRDRERRRDQDDRDRERERG---RSKRS 78
           +RDR ++RERD+D   +RDRRR R+DRD R+RDRDRER     DR+R+R+RG   +  RS
Sbjct: 3   ERDR-RERERDKDREPDRDRRRGRDDRD-RDRDRDRER-----DRERDRDRGLRNKKSRS 62

Query: 79  LTPDRSRSRRSRTRSPDRHRSRSLS---RTPEDRPSRRRHRSPSPDHARKRHRRDLTADD 138
            TPD   +R    RSP+R+RSRS S       DR    R RSPSPD   ++  R  + DD
Sbjct: 63  RTPDH-HARARHVRSPERYRSRSRSIDRDRDRDRQRHHRRRSPSPDAPSRKRPRQGSVDD 122

Query: 139 EKE--RQKAVSDFVD----GIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEMMKKLGIP 198
           EKE  R++ V+D VD     I K++ KQ ++  + GGGE  +E   D +E+EMMK LGIP
Sbjct: 123 EKERNRKRVVTDSVDENASTITKKKDKQPSDAADNGGGE--DEEGMDVNEIEMMKMLGIP 182

Query: 199 VGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 233
            GFDSTKGKPV GADVSG+R VTKRQPRQYMNRRGGFNRPLPAER+R
Sbjct: 183 TGFDSTKGKPVAGADVSGIRAVTKRQPRQYMNRRGGFNRPLPAERNR 219

The following BLAST results are available for this feature:
BLAST of CSPI01G20360 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8K1944.6e-0941.54U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Mus musculus OX=10090... [more]
Q8WVK23.9e-0841.03U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Homo sapiens OX=9606 ... [more]
Q6GLZ87.4e-0738.58U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Xenopus laevis OX=835... [more]
Q6DDA42.8e-0638.74U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Xenopus tropicalis OX... [more]
Q6DH741.1e-0541.09U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Danio rerio OX=7955 G... [more]
BLAST of CSPI01G20360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LU611.3e-107100.00SNRNP27 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G423230 PE=... [more]
A0A5D3CK714.4e-10396.98U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Cucumis melo var. mak... [more]
A0A1S3BW274.4e-10396.98U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Cucumis melo OX=3656 ... [more]
A0A6J1L1Y62.3e-8885.90U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like OS=Cucurbita maxima... [more]
A0A6J1C0K36.8e-8885.71U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Momordica charantia O... [more]
BLAST of CSPI01G20360 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146322.12.7e-107100.00U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis sativus] >KGN65... [more]
XP_008453595.19.0e-10396.98PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo... [more]
KAG6589703.11.8e-9088.89U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argy... [more]
XP_023530476.14.8e-8885.90U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo sub... [more]
XP_023007065.14.8e-8885.90U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita maxima] ... [more]
BLAST of CSPI01G20360 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G57370.12.7e-3655.95unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1777... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013957U4/U6.U5 small nuclear ribonucleoprotein 27kDa proteinPFAMPF08648SNRNP27coord: 173..228
e-value: 9.0E-25
score: 86.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..85
NoneNo IPR availablePANTHERPTHR31077:SF4BNAA10G11430D PROTEINcoord: 34..232
NoneNo IPR availablePANTHERPTHR31077U4/U6.U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 27 KDA PROTEINcoord: 34..232

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G20360.1CSPI01G20360.1mRNA
CSPI01G20360.2CSPI01G20360.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
biological_process GO:0008380 RNA splicing
cellular_component GO:0005634 nucleus