CSPI01G19390 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G19390
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationChr1: 14883259 .. 14886473 (-)
RNA-Seq ExpressionCSPI01G19390
SyntenyCSPI01G19390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAATAAGCTTGAATCGCTATGTGCCCCTAAAACTGGTAATAATAAAATGTTTCTGATTAAACAGGTGATGGAGTTAAAGTATCAAGATGTTAGATCACTTGAATACATTTCAAGGTATTTTGAATCAGTTATCTAGAATGAATATCAAGTTTGAGAATGAGATACATGGGCTATGGGTGCTTTGTACATTGCTGGACTCGTGGAAAATATTTAGAACTTCCTTATCGAACTCAACCCCAAATGGTGTACCAGTATGGACCTAGTAAAAAGTAGCGTGTTGAACGAGGAGATGAGAAGAAAGTCTCAAAGTTCTTCTTCACAGTCAGATGTTCTGGTTACTGAAAAGAGGGGGAGGAGTAAAAGTAAGGGTCCGAGAGGTAAAAACAGAAGCAAAAGCAGGAGTGATCGGTTTGCAAATGTTGAGTATCACTATTGCCATGAAAAAGGACATATAAAGAAGTATTGTCGATGCTGATGTTGTAAATCTTGCCACACAACAGAGCAGTTGGGTGATTGATAGTGGTGCATCAGTTCATGTTACTTCGAAGAGGGAATTTTTTGCATCCTATACTTCTGGTGATTTTGGCAATGTTAGGATGGGTAATGACAAATCAACAAATACAATTGGCATCATAGATGTACACTTGAAGAATGGAAATGGTTCTAGGCCGATTTTGAAAAACGTGAAACATATTCCTTATATTCGCATGAACTTGATTTCTACAGGTAAGCTTGATGACAAGGGTTTTTGCAATACCTTTGACAATGGCATATGGAAGCTTACTAAAGGTTCAATGGATATAGCAAAGGGACAAAAATTATCTTCACTCTACTACATGGATGCAAAAATCATAGATTCTGATATAAATACAATGAATGATGAAGCAAATGTTAAGCTTTGGCATAAGAGACTTAGTCATATAAGTGAGAAGGGTTTAAAGATTTTAACAAAAAAAAATCATTTTCCTGATCTAAAGAGTACACCTCTAAAACGGTGTCCTCATTGTCTGGCAGGAAAGCAGACAAGAGTTACCTTTAAATCATCTCAGCATTCAAGGAAGCCAAATGTACTAGAGTTGGTATATTCTGATGTGTGTGGTCCCATGAAAACAAAGTCTCTTGGGGGTGCTTTATATTTTGTGACATTTACCGATGATCATTCAAGGAAAATATGAGTTTACACCTTGAAGACTAAAGATCAAGTGTTGCAAGCGTTTAAACAGTTTCATGCCTTTATTGAGAAAGAAACTGGTGAAAATCTCAAGTGTTTTAGAACTGATAATGGAGGTGAGTATTATGGACCTTTTGATGAATATTGTAGAAATCATGGCATTCGACATTAAAAGACACCTCCTAAGACACCGCAGTTAAATGGGATAGCTGAAAAATTGAACAGAACATTGGTTGAGAGAGTGAGATGCTTATTATTTGAATCACAGTTGCCACAGTCATTCTGAGGCAAAGCTTTAAATACAGTTGTACATGTTTTGAATTTCACACCATGTGTTCCATTGGGATCGAAAGTTCCAAACAGAATATGGTCAGGTAAGGATATATCTTACAGTCACCTATGTGTCTTTGGTTGTAAAGCTTTTGTTTATGTACCTAAAGATGAGAGATCAAAGCTTGATGCAAAAACTAAAGCATGTGTGTTTCTTGGTTATGGCCAAGATGAGTTTGGTTATAAATTATATGATCCAGTTAAGAAAAAACTTATAAGAAGTCGAGATGTTGTATTTGTTGAAGACCAAACAATAACAGACATTGAGAAAATAGCTAAACATAGTGATAATCTAATTGACTTGTGTTCAACCTCTTTGACATAGTCTTCTACACAAATAGAAGATGAGGTTCAAAATAGACAGTTTTTTTTACACAAATGAGAGTTCTGAGCAGGTTTGGACAGAGGATAGAGTTGAAGAACAGTTAGCTGAAATAGTTGTTCCTACAGATGTTTCACTCAGGAGATCTGTCAGAGATCGACGTCCGTCAACAAGATATTCACCTAATGAATATTTGCTATTGACTGACGGGTGAGAACCTGAGAGTTATGAAGAGGCTATAGAGGATGAGCACAAAAATGAGTGGAACGATGCAATGAAAGATGAGATGGAGTCTTTACATGCAAACTACACTTTTGAGCTTGTTAAGTTGCCTAAAGGAAAAACTGCACTGAATAATAAGTGGGTTTACAGAATTAAATATGAAGAACATACCTCAAAGACATGTTAAAAAGCAAGATTGGTTGTCAAAGGGTTCAGTTAGAAGAAAGGTATCGACTTTGATGAAATTTTTGCTCCAGTTGTCAAAATGTCCTCCATACGTGTTATTCTGGGTTTGGCAGCCAGTCTTGTCTTAAAGGTTGAGCAGATGGACGTTAAGACTGCTTTTCTTCATGGGGATTTAGACAAAGAAATCTATATGAGAACAACCAGAGGATTTTGAGTAGAAAGGAAAAGAGCATCTGGTGTGTAAATTGAAGAAAAGTCTCTATGGGTTGAAACAGGCACCGAGAAAGTGGTACAAGAAGTTTGAGTCAGTTATGGGGGAGCAAGGCTATAGAAAAACTACTTCTGATCATTATGTTTTTGTCCATAAATTTTTTGATGATGATTTTGTTATATTATTACTCTATGTTGATGATATTTTGATTGTTGGCAGGAATGTTTCGAGAATTGATAACTTGAAGAAACAGTTGAGCAAATCCTTTGCCATGAAGGATTTGGGGCCAGCAAAGAAAGTTCTTGGAATTCAAATAGTTCGAGACAGAGCATCCAAGGAGTTATACATGTCACTAGAGCAATACATAGAAAGTACTTGAACGTTTCAAGATGAGTCAAGCAAAATCAGTTAGTTCTCCTTTACTCAGTCACTTCAAACTTATCAATAAACAGAGCCCTTCTACATATAAAGAGAAGGAGGATATGAATAAGGTCCCATATGCTTCAGCAGTTGGAAGCCTAATGTAGTATGTCATGGTATGTACTAGACCTGATATTTCTCATGTTATTGGTGTTGTTAGTCGTTATATGTCTAATCCAGGAAAACAACATTGGGAGGCAGTCAAGTGCATCATGAGATATTTGAGAGGTACTTCCAGATTGAAGCTCACATTTGGGAATGGAAAGCCAATACTTGCAGGTATAATGATTCAGATATGGCAGGGGACTTAGACAGCAAAAGTCTACTTCTGGTTACTTGATGACATTT

mRNA sequence

ATGTGGAATAAGCTTGAATCGCTATGTGCCCCTAAAACTGGTAATAATAAAATGTTTCTGATTAAACAGGTGATGGAGTTAAAGTATCAAGATGTTAGATCACTTGAATACATTTCAAGTATGGACCTAGTAAAAAGTAGCGTGTTGAACGAGGAGATGAGAAGAAAGTCTCAAAGTTCTTCTTCACAGTCAGATGTTCTGGTTACTGAAAAGAGGGGGAGGAGTAAAAGTAAGGGTCCGAGAGGTAAAAACAGAAGCAAAAGCAGGAGTGATCGGTTTGCAAATAGCAGTTGGGTGATTGATAGTGGTGCATCAGTTCATGTTACTTCGAAGAGGGAATTTTTTGCATCCTATACTTCTGGTGATTTTGGCAATGTTAGGATGGGTAATGACAAATCAACAAATACAATTGGCATCATAGATGTACACTTGAAGAATGGAAATGGTTCTAGGCCGATTTTGAAAAACGTGAAACATATTCCTTATATTCGCATGAACTTGATTTCTACAGGTAAGCTTGATGACAAGGGTTTTTGCAATACCTTTGACAATGGCATATGGAAGCTTACTAAAGGTTCAATGGATATAGCAAAGGGACAAAAATTATCTTCACTCTACTACATGGATGCAAAAATCATAGATTCTGATATAAATACAATGAATGATGAAGCAAATGTTAAGCTTTGGCATAAGAGACTTAGTCATATAAGAAAGCAGACAAGAGTTACCTTTAAATCATCTCAGCATTCAAGGAAGCCAAATGTACTAGAGTTGACTAAAGATCAAGTGTTGCAAGCGTTTAAACAGTTTCATGCCTTTATTGAGAAAGAAACTGGTGAAAATCTCAAGTGTTTTAGAACTGATAATGGAGTTGCCACAGTCATTCTGAGGCAAAGCTTTAAATACAGTTGTACATGTTTTGAATTTCACACCATGTGTTCCATTGGGATCGAAAGTTCCAAACAGAATATGGTCAGTTCTGAGCAGGTTTGGACAGAGGATAGAGTTGAAGAACAGTTAGCTGAAATAGTTGTTCCTACAGATGTTTCACTCAGGAGATCTGTCAGAGATCGACAACCTGAGAGTTATGAAGAGGCTATAGAGGATGAGCACAAAAATGAGTGGAACGATGCAATGAAAGATGAGATGGAGTCTTTACATGCAAACTACACTTTTGAGCTTGTTAAGTTGCCTAAAGGAAAAACTGCACTGAATAATAAGTGGAAGAAAGGTATCGACTTTGATGAAATTTTTGCTCCAGTTGTCAAAATGTCCTCCATACGTGTTATTCTGGGTTTGGCAGCCAGTCTTGTCTTAAAGGCACCGAGAAAGTGGTACAAGAAGTTTGAGTCAGTTATGGGGGAGCAAGGCTATAGAAAAACTACTTCTGATCATTATGTTTTTGTCCATAAATTTTTTGATGATGATTTTGTTATATTATTACTCTATGTTGATGATATTTTGATTGTTGGCAGGAATGTTTCGAGAATTGATAACTTGAAGAAACAGTTGAGCAAATCCTTTGCCATGAAGGATTTGGGGCCAGCAAAGAAAGTTCTTGGAATTCAAATAGTTCGAGACAGAGCATCCAAGGATCACTTCAAACTTATCAATAAACAGAGCCCTTCTACATATAAAGAGAAGGAGGATATGAATAAGGTCCCATATGCTTCAGCAGTTGGAAGCCTAATGAAAACAACATTGGGAGGCAGTCAAGTGCATCATGAGATATTTGAGAGGTACTTCCAGATTGAAGCTCACATTTGGGAATGGAAAGCCAATACTTGCAGGTATAATGATTCAGATATGGCAGGGGACTTAGACAGCAAAAGTCTACTTCTGGTTACTTGATGACATTT

Coding sequence (CDS)

ATGTGGAATAAGCTTGAATCGCTATGTGCCCCTAAAACTGGTAATAATAAAATGTTTCTGATTAAACAGGTGATGGAGTTAAAGTATCAAGATGTTAGATCACTTGAATACATTTCAAGTATGGACCTAGTAAAAAGTAGCGTGTTGAACGAGGAGATGAGAAGAAAGTCTCAAAGTTCTTCTTCACAGTCAGATGTTCTGGTTACTGAAAAGAGGGGGAGGAGTAAAAGTAAGGGTCCGAGAGGTAAAAACAGAAGCAAAAGCAGGAGTGATCGGTTTGCAAATAGCAGTTGGGTGATTGATAGTGGTGCATCAGTTCATGTTACTTCGAAGAGGGAATTTTTTGCATCCTATACTTCTGGTGATTTTGGCAATGTTAGGATGGGTAATGACAAATCAACAAATACAATTGGCATCATAGATGTACACTTGAAGAATGGAAATGGTTCTAGGCCGATTTTGAAAAACGTGAAACATATTCCTTATATTCGCATGAACTTGATTTCTACAGGTAAGCTTGATGACAAGGGTTTTTGCAATACCTTTGACAATGGCATATGGAAGCTTACTAAAGGTTCAATGGATATAGCAAAGGGACAAAAATTATCTTCACTCTACTACATGGATGCAAAAATCATAGATTCTGATATAAATACAATGAATGATGAAGCAAATGTTAAGCTTTGGCATAAGAGACTTAGTCATATAAGAAAGCAGACAAGAGTTACCTTTAAATCATCTCAGCATTCAAGGAAGCCAAATGTACTAGAGTTGACTAAAGATCAAGTGTTGCAAGCGTTTAAACAGTTTCATGCCTTTATTGAGAAAGAAACTGGTGAAAATCTCAAGTGTTTTAGAACTGATAATGGAGTTGCCACAGTCATTCTGAGGCAAAGCTTTAAATACAGTTGTACATGTTTTGAATTTCACACCATGTGTTCCATTGGGATCGAAAGTTCCAAACAGAATATGGTCAGTTCTGAGCAGGTTTGGACAGAGGATAGAGTTGAAGAACAGTTAGCTGAAATAGTTGTTCCTACAGATGTTTCACTCAGGAGATCTGTCAGAGATCGACAACCTGAGAGTTATGAAGAGGCTATAGAGGATGAGCACAAAAATGAGTGGAACGATGCAATGAAAGATGAGATGGAGTCTTTACATGCAAACTACACTTTTGAGCTTGTTAAGTTGCCTAAAGGAAAAACTGCACTGAATAATAAGTGGAAGAAAGGTATCGACTTTGATGAAATTTTTGCTCCAGTTGTCAAAATGTCCTCCATACGTGTTATTCTGGGTTTGGCAGCCAGTCTTGTCTTAAAGGCACCGAGAAAGTGGTACAAGAAGTTTGAGTCAGTTATGGGGGAGCAAGGCTATAGAAAAACTACTTCTGATCATTATGTTTTTGTCCATAAATTTTTTGATGATGATTTTGTTATATTATTACTCTATGTTGATGATATTTTGATTGTTGGCAGGAATGTTTCGAGAATTGATAACTTGAAGAAACAGTTGAGCAAATCCTTTGCCATGAAGGATTTGGGGCCAGCAAAGAAAGTTCTTGGAATTCAAATAGTTCGAGACAGAGCATCCAAGGATCACTTCAAACTTATCAATAAACAGAGCCCTTCTACATATAAAGAGAAGGAGGATATGAATAAGGTCCCATATGCTTCAGCAGTTGGAAGCCTAATGAAAACAACATTGGGAGGCAGTCAAGTGCATCATGAGATATTTGAGAGGTACTTCCAGATTGAAGCTCACATTTGGGAATGGAAAGCCAATACTTGCAGGTATAATGATTCAGATATGGCAGGGGACTTAGACAGCAAAAGTCTACTTCTGGTTACTTGA

Protein sequence

MWNKLESLCAPKTGNNKMFLIKQVMELKYQDVRSLEYISSMDLVKSSVLNEEMRRKSQSSSSQSDVLVTEKRGRSKSKGPRGKNRSKSRSDRFANSSWVIDSGASVHVTSKREFFASYTSGDFGNVRMGNDKSTNTIGIIDVHLKNGNGSRPILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKLSSLYYMDAKIIDSDINTMNDEANVKLWHKRLSHIRKQTRVTFKSSQHSRKPNVLELTKDQVLQAFKQFHAFIEKETGENLKCFRTDNGVATVILRQSFKYSCTCFEFHTMCSIGIESSKQNMVSSEQVWTEDRVEEQLAEIVVPTDVSLRRSVRDRQPESYEEAIEDEHKNEWNDAMKDEMESLHANYTFELVKLPKGKTALNNKWKKGIDFDEIFAPVVKMSSIRVILGLAASLVLKAPRKWYKKFESVMGEQGYRKTTSDHYVFVHKFFDDDFVILLLYVDDILIVGRNVSRIDNLKKQLSKSFAMKDLGPAKKVLGIQIVRDRASKDHFKLINKQSPSTYKEKEDMNKVPYASAVGSLMKTTLGGSQVHHEIFERYFQIEAHIWEWKANTCRYNDSDMAGDLDSKSLLLVT*
Homology
BLAST of CSPI01G19390 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-71
Identity = 286/1025 (27.90%), Postives = 386/1025 (37.66%), Query Frame = 0

Query: 38   ISSMDLVKSSVLNEEMRRKSQSSSSQSDVLVTEKRGRSKSK--------GPRG--KNRSK 97
            I   D+  + +LNE+MR+K +   +Q   L+TE RGRS  +        G RG  KNRSK
Sbjct: 170  IELKDVTSALLLNEKMRKKPE---NQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSK 229

Query: 98   SRSDRFAN---------------------------------------------------- 157
            SR     N                                                    
Sbjct: 230  SRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMH 289

Query: 158  -----SSWVIDSGASVHVTSKREFFASYTSGDFGNVRMGNDKSTNTIGIIDVHLKNGNGS 217
                 S WV+D+ AS H T  R+ F  Y +GDFG V+MGN   +   GI D+ +K   G 
Sbjct: 290  LSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGC 349

Query: 218  RPILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKLSSLYYMDA 277
              +LK+V+H+P +RMNLIS   LD  G+ + F N  W+LTKGS+ IAKG    +LY  +A
Sbjct: 350  TLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNA 409

Query: 278  KIIDSDINTMNDEANVKLWHKRLSHIR------------------------------KQT 337
            +I   ++N   DE +V LWHKR+ H+                               KQ 
Sbjct: 410  EICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQH 469

Query: 338  RVTFKSSQHSRKPNVLEL-------------------------------------TKDQV 397
            RV+F++S   RK N+L+L                                     TKDQV
Sbjct: 470  RVSFQTSS-ERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQV 529

Query: 398  LQAFKQFHAFIEKETGENLKCFRTD-------------------------------NGVA 457
             Q F++FHA +E+ETG  LK  R+D                               NGVA
Sbjct: 530  FQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVA 589

Query: 458  -----TVI-----------LRQSF------------------------------------ 517
                 T++           L +SF                                    
Sbjct: 590  ERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSY 649

Query: 518  ----KYSCTCF------------------------------------------------- 577
                 + C  F                                                 
Sbjct: 650  SHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFR 709

Query: 578  --EFHTMCS-------------IGIESSKQNMVSSEQVWTE---------------DRVE 611
              E  T                + I S+  N  S+E    E               ++++
Sbjct: 710  ESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLD 769

BLAST of CSPI01G19390 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 71.2 bits (173), Expect = 4.5e-11
Identity = 56/238 (23.53%), Postives = 99/238 (41.60%), Query Frame = 0

Query: 360  PESYEEAIEDEHKNEWNDAMKDEMESLHANYTFELVKLPKGKTALNNKW----------- 419
            P S++E    + K+ W +A+  E+ +   N T+ + K P+ K  ++++W           
Sbjct: 891  PNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGN 950

Query: 420  ---------------KKGIDFDEIFAPVVKMSSIRVILGLAASLVLK------------- 479
                           K  ID++E FAPV ++SS R IL L     LK             
Sbjct: 951  PIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNG 1010

Query: 480  ---------------------------------APRKWYKKFESVMGEQGYRKTTSDHYV 525
                                             A R W++ FE  + E  +  ++ D  +
Sbjct: 1011 TLKEEIYMRLPQGISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCI 1070

BLAST of CSPI01G19390 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.6e-08
Identity = 58/245 (23.67%), Postives = 99/245 (40.41%), Query Frame = 0

Query: 357  DRQPESYEEAIEDEHKNEWNDAMKDEMESLHANYTFELVKLPKGK-TALNNKW------- 416
            + +P +  +A++DE    W +AM  E+ +   N+T++LV  P    T +  +W       
Sbjct: 953  ESEPRTAIQALKDE---RWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYN 1012

Query: 417  -------------------KKGIDFDEIFAPVVKMSSIRVILGLAASL------------ 476
                               + G+D+ E F+PV+K +SIR++LG+A               
Sbjct: 1013 SDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNA 1072

Query: 477  ------------------------------------VLKAPRKWYKKFESVMGEQGYRKT 527
                                                + +APR WY +  + +   G+  +
Sbjct: 1073 FLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNS 1132

BLAST of CSPI01G19390 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.7e-06
Identity = 54/243 (22.22%), Postives = 96/243 (39.51%), Query Frame = 0

Query: 359  QPESYEEAIEDEHKNEWNDAMKDEMESLHANYTFELV-KLPKGKTALNNKW--------- 418
            +P +  +A++D+    W  AM  E+ +   N+T++LV   P   T +  +W         
Sbjct: 938  EPRTAIQAMKDD---RWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSD 997

Query: 419  -----------------KKGIDFDEIFAPVVKMSSIRVILGLAASL-------------- 478
                             + G+D+ E F+PV+K +SIR++LG+A                 
Sbjct: 998  GSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1057

Query: 479  ----------------------------------VLKAPRKWYKKFESVMGEQGYRKTTS 527
                                              + +APR WY +  + +   G+  + S
Sbjct: 1058 QGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSIS 1117

BLAST of CSPI01G19390 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.1e-04
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 0

Query: 480 LLLYVDDILIVGRNVSRIDNLKKQLSKSFAMKDLGPAKKVLGIQI 525
           LLLYVDDIL+ G + + ++ L  QLS +F+MKDLGP    LGIQI
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI 47

BLAST of CSPI01G19390 vs. ExPASy TrEMBL
Match: A0A438CGI4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1683 PE=4 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 1.9e-158
Identity = 401/987 (40.63%), Postives = 481/987 (48.73%), Query Frame = 0

Query: 1    MWNKLESLCAPKTGNNKMFLIKQVMELKYQD----------------------------V 60
            +WNKLE L A KTGNNK+FLIK++M LKYQD                            V
Sbjct: 60   LWNKLEQLYARKTGNNKLFLIKKMMSLKYQDGTPMTDHLNTFQGIINQLAGMNIKFEEEV 119

Query: 61   RSL----------------------EYISSMDLVKSSVLNEEMRRKSQSSSSQSDVLVTE 120
            + L                      + I +MDLVKS VLNEEMRRKSQ SSSQS VLV E
Sbjct: 120  QGLWLLGTLPDSWETFRTSLSNSAPDGIMNMDLVKSCVLNEEMRRKSQGSSSQSSVLVIE 179

Query: 121  KRGRSKSKGPRGKNRSKSRSDRFAN----------------------------------- 180
            KRGRSKS+GP+ ++RSKS++++FAN                                   
Sbjct: 180  KRGRSKSRGPKNRDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDMKQGKVKEKKNDN 239

Query: 181  -----------------------------SSWVIDSGASVHVTSKREFFASYTSGDFGNV 240
                                         +SWVIDSGAS+H T +++FF SYTSGDFG+V
Sbjct: 240  GGEDDQVATTTSDFLIVYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGDFGSV 299

Query: 241  RMGNDKSTNTIGIIDVHLKNGNGSRPILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGI 300
            RMGND S   IG+ DV L+  NG+   LKNVKHIP IRMNLISTGKLDD+GFCNTF +  
Sbjct: 300  RMGNDGSAKAIGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQ 359

Query: 301  WKLTKGSMDIAKGQKLSSLYYMDAKIIDSDINTMNDEANVKLWHKRLSHIR--------- 360
            WKLT+GSM IAKG K SSLY M A++IDS IN ++D++  +LWH RL H+          
Sbjct: 360  WKLTRGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAK 419

Query: 361  ---------------------KQTRVTFKSSQHSRKPN-------VLEL-TKDQVLQAFK 420
                                 KQTRV FK+ +H+RKP+       V  L TKDQ+L  FK
Sbjct: 420  KNLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRHTRKPDDHSRKIWVYTLKTKDQMLDVFK 479

Query: 421  QFHAFIEKETGENLKCFRTDNG-------------------------------------- 480
            QFHA +E+++GE LKC RTDNG                                      
Sbjct: 480  QFHALVERQSGEKLKCIRTDNGGEYSGPFDEYCRQHDERSKLDAKTRPCVFIGYGQDELG 539

Query: 481  ------VATVILRQSFKYSCTCFEFHTMCSIGIESSKQNMVSSE---------------- 540
                  V   ++R          E HT+  I   +  ++  S +                
Sbjct: 540  YRFYDPVQKKLVRSR---DVVFMEDHTIQDIEKTNPMESQHSGDLIDLDPAPLTNLPTQV 599

Query: 541  ------------------QVWTEDRVEEQLAEIVVPTDVSLRRSVRDR------------ 600
                              QV  +D V EQ      P D+ LRRS RDR            
Sbjct: 600  EDEAHDDQHDMGDVETPTQVEMDDDVHEQSPAAEAPLDIPLRRSTRDRHPSTRYSVDDYV 659

Query: 601  ------QPESYEEAIEDEHKNEWNDAMKDEMESLHANYTFELVKLPKGKTALNNKW---- 611
                  +PESY EA+EDE+K +W DAM+DEMESLH N++FELVKLPKGK AL N+W    
Sbjct: 660  LLTDGGEPESYVEAMEDENKMKWVDAMQDEMESLHENHSFELVKLPKGKRALKNRWVYRV 719

BLAST of CSPI01G19390 vs. ExPASy TrEMBL
Match: A0A438HN89 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3233 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 1.3e-146
Identity = 407/1127 (36.11%), Postives = 488/1127 (43.30%), Query Frame = 0

Query: 1    MWNKLESLCAPKTGNNKMFLIKQVMELKYQD----------------------------V 60
            +WNKLE L A KTGNNK+FLIK++M LKYQD                            V
Sbjct: 60   LWNKLEQLYARKTGNNKLFLIKKMMSLKYQDGTPITDHLNTFQGIINQLAGMNIKFEEEV 119

Query: 61   RSL----------------------EYISSMDLVKSSVLNEEMRRKSQSSSSQSDVLVTE 120
            + L                      + I +MDLVKS VLNEEMRRKSQ SSSQS VLV E
Sbjct: 120  QGLWLLGTLPDSWETFRTSLSNSAPDGIMNMDLVKSCVLNEEMRRKSQGSSSQSSVLVIE 179

Query: 121  KRGRSKSKGPRGKNRSKSRSDRFAN----------------------------------- 180
            KRGRSKS+GP+ ++RSKS++++FAN                                   
Sbjct: 180  KRGRSKSRGPKNRDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDMKQGKVKEKKNDN 239

Query: 181  -----------------------------SSWVIDSGASVHVTSKREFFASYTSGDFGNV 240
                                         +SWVIDSGAS+H T +++FF SYTSGDFG+V
Sbjct: 240  GGEDDQVATTTSDFLIVYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGDFGSV 299

Query: 241  RMGNDKSTNTIGIIDVHLKNGNGSRPILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGI 300
            RMGND S   I + DV L+  NG+   LKNVKHIP IRMNLISTGKLDD+GFCNTF +  
Sbjct: 300  RMGNDGSAKAISMRDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQ 359

Query: 301  WKLTKGSMDIAKGQKLSSLYYMDAKIIDSDINTMNDEANVKLWHKRLSHIR--------- 360
            WKLT+GSM IAKG K SSLY M A++IDS IN ++D++  +LWH RL H+          
Sbjct: 360  WKLTRGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAK 419

Query: 361  ---------------------KQTRVTFKSSQHSRKPNVLEL------------------ 420
                                 KQTRV FK+ +H+RKP +L+L                  
Sbjct: 420  KNLLSSMKKGSLKRCAHCLAGKQTRVAFKTLRHTRKPGMLDLVYSDVCGPMKTKTLGGSL 479

Query: 421  -------------------TKDQVLQAFKQFHAFIEKETGENLKCFRTDNG--------- 480
                               TKDQVL  FKQFHA +E+++GE LKC RTDNG         
Sbjct: 480  YFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIRTDNGGEYSGPFDE 539

Query: 481  -------------------------------------VATVILRQSF------------- 540
                                                 ++   L +SF             
Sbjct: 540  YCRQHGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHVLN 599

Query: 541  ---------------------------KYSCTCF-------------------------- 600
                                        + C  F                          
Sbjct: 600  LTPCVPLEFDVPDRIWSNDEISYDHLRVFGCKAFVHIPKDERSKLDAKTRPCVFIGYGQD 659

Query: 601  -----------------------EFHTMCSIGIESSKQNMVSSE---------------- 611
                                   E HT+  I   +  ++  SS+                
Sbjct: 660  ELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEKTNPMESQHSSDLIDLDPVPLANLPTQV 719

BLAST of CSPI01G19390 vs. ExPASy TrEMBL
Match: A0A438HUT4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_569 PE=4 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 1.9e-145
Identity = 406/1127 (36.02%), Postives = 486/1127 (43.12%), Query Frame = 0

Query: 1    MWNKLESLCAPKTGNNKMFLIKQVMELKYQD----------------------------V 60
            +WNKLE L A KTGNNK+FLIK++M LKYQD                            V
Sbjct: 60   LWNKLEQLYARKTGNNKLFLIKKMMSLKYQDGTPMTDHLNTFQGIINQLAGMNIKFEEEV 119

Query: 61   RSL----------------------EYISSMDLVKSSVLNEEMRRKSQSSSSQSDVLVTE 120
            + L                      + I +MDLVKS VLNEEMRRKSQ SSSQS VLV E
Sbjct: 120  QGLWLLGTLPDSWETFRTSLSNSAPDGIMNMDLVKSCVLNEEMRRKSQGSSSQSSVLVIE 179

Query: 121  KRGRSKSKGPRGKNRSKSRSDRFAN----------------------------------- 180
            KRGRSKS+GP+ ++RSKS++++FAN                                   
Sbjct: 180  KRGRSKSRGPKNRDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDMKQGKVKEKKNDN 239

Query: 181  -----------------------------SSWVIDSGASVHVTSKREFFASYTSGDFGNV 240
                                         +SWVIDSGAS+H T +++FF SYTSGDFG+V
Sbjct: 240  GGEDDQVATTTSDFLIVYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGDFGSV 299

Query: 241  RMGNDKSTNTIGIIDVHLKNGNGSRPILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGI 300
             MGND S   IG+ DV L+  NG+   LKNVKHIP IRMNLISTGKLDD+GFCNTF +  
Sbjct: 300  MMGNDGSAKAIGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQ 359

Query: 301  WKLTKGSMDIAKGQKLSSLYYMDAKIIDSDINTMNDEANVKLWHKRLSHIR--------- 360
            WKLT+GSM IAKG K SSLY M A++IDS IN ++D++  +LWH RL H+          
Sbjct: 360  WKLTRGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAK 419

Query: 361  ---------------------KQTRVTFKSSQHSRKPNVLEL------------------ 420
                                 KQTRV FK+ +H+RKP +L+L                  
Sbjct: 420  KNLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRHTRKPGMLDLVYSDVCGPMKTKTLGGSL 479

Query: 421  -------------------TKDQVLQAFKQFHAFIEKETGENLKCFRTDNG--------- 480
                               TKDQVL  FKQFHA +E+++GE LKC RTDNG         
Sbjct: 480  YFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIRTDNGGEYSGPFDE 539

Query: 481  -------------------------------------VATVILRQSF------------- 540
                                                 ++   L +SF             
Sbjct: 540  YCRQHGIRHQKTPPKTPQLNGLAERINRTLVERVRCLLSQSQLPRSFWGEALNTVVHVLN 599

Query: 541  ---------------------------KYSCTCF-------------------------- 600
                                        + C  F                          
Sbjct: 600  LTPCVPLEFDVLDRIWSNNEISYDHLRVFGCKAFVHIPKDERSKLDAKTRPCVFIGYGQD 659

Query: 601  -----------------------EFHTMCSIGIESSKQNMVSSE---------------- 611
                                   E HT+  I   +  ++  SS+                
Sbjct: 660  ELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEKTNPMESQHSSDLIDLDPVPLANLPTQV 719

BLAST of CSPI01G19390 vs. ExPASy TrEMBL
Match: A0A5A7TFU1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35G00580 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 4.5e-139
Identity = 376/827 (45.47%), Postives = 423/827 (51.15%), Query Frame = 0

Query: 1   MWNKLESLCAPKT---------GNNKMFLIKQVMELKYQDVRSL--EYISSMDLVKSSVL 60
           MWNKLESLCAPKT         G   +  +    E+    + +     I SMDLVKSSVL
Sbjct: 112 MWNKLESLCAPKTVIKFEDEICGLWVLGTLPDSWEIFRTSLSNSAPNGILSMDLVKSSVL 171

Query: 61  NEEMRRKSQSSSSQSDVLVTEKRGRSKSKGPRGKNRSKSRSDRFANSSWVIDSGASVHVT 120
           NEEMRRKSQSSS QSD LVTE+RGRSKSKGPR        +     SSWVIDSGASVH T
Sbjct: 172 NEEMRRKSQSSSVQSDFLVTERRGRSKSKGPR-------VNLVIQQSSWVIDSGASVHAT 231

Query: 121 SKREFFASYTSGDFGNVRMGNDKSTNTIGIIDVHLKNGNGSRPILKNVKHIPYIRMNLIS 180
           SKREFFASYT GDFG+VRMGND  TN +GI DVHLKN NGSR ILKNVKHIP I MNLIS
Sbjct: 232 SKREFFASYTPGDFGSVRMGNDGPTNVVGIGDVHLKNRNGSRLILKNVKHIPDIHMNLIS 291

Query: 181 TGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKLSSLYYMDAKIIDSDINTMNDEANVKLW 240
           TGKLDD+GFCNTFDNGIWKLTKGSM IA GQK SSLYYMDAKIID DINT+NDEANV+LW
Sbjct: 292 TGKLDDEGFCNTFDNGIWKLTKGSMVIASGQKFSSLYYMDAKIIDYDINTVNDEANVELW 351

Query: 241 HKRLSHIR------------------------------KQTRVTFKSSQHSRKPNVLEL- 300
           HKRLSH+                               KQTRVTFKSSQHSRK NVLEL 
Sbjct: 352 HKRLSHMSEKGLKILTKKNHLHDLKSTPLKRCPHCLAGKQTRVTFKSSQHSRKSNVLELV 411

Query: 301 ------------------------------------TKDQVLQAFKQFHAFIEKETGENL 360
                                               TKDQV   FKQFHA +E+ETGE L
Sbjct: 412 HSNVCGLMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQV---FKQFHASVERETGEKL 471

Query: 361 KCFRTDNG----------------------------------------------VATVIL 420
           KC RTDNG                                              +    L
Sbjct: 472 KCIRTDNGGEYCGPFDEYCRNHGIRHQKTPPKSSQLNGIAKRLNRTLVERVRCLLTESQL 531

Query: 421 RQSFKYSCTCFEFHTM-----CSIGIESSKQNMVSSEQVWTEDRVEEQLAEIVVPTDVS- 480
            QSF         H +       +G E   +     +  ++  RV    A + VP D   
Sbjct: 532 PQSFWGEALNTVIHVLNLTPCVPLGSEVPNRIWSGKDISYSHLRVFGCKAFVHVPKDERS 591

Query: 481 ---------------------------LRRSVRDR-----------------------QP 540
                                       ++ +R R                       +P
Sbjct: 592 KLDAKTKPCVFLGYGQDEFGYRVYHRVKKKLIRSRDVVFVEDQTIADIEKIDEPKSKHKP 651

Query: 541 ESYEEAIEDEHKNEWNDAMKDEMESLHANYTFELVKLPKGKTALNNKW------------ 600
           ESYEEAIEDEHK EWNDAMKDEM+SLHAN+TFELVKL KGKTAL NKW            
Sbjct: 652 ESYEEAIEDEHKREWNDAMKDEMKSLHANHTFELVKLSKGKTALRNKWVYRIKQEEHTSK 711

Query: 601 --------------KKGIDFDEIFAPVVKMSSIRVILGLAASLVLKAPRKWYKKFESVMG 611
                         KK IDFDEIFAPVVKMSSIRV+LGLAASL L+              
Sbjct: 712 PRYKARLVVKGFNQKKDIDFDEIFAPVVKMSSIRVVLGLAASLDLEV------------- 771

BLAST of CSPI01G19390 vs. ExPASy TrEMBL
Match: A0A5D3BKF7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00180 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 7.7e-139
Identity = 375/827 (45.34%), Postives = 422/827 (51.03%), Query Frame = 0

Query: 1   MWNKLESLCAPKT---------GNNKMFLIKQVMELKYQDVRSL--EYISSMDLVKSSVL 60
           MWNKLESLCAPKT         G   +  +    E+    + +     I SMDLVKSSVL
Sbjct: 112 MWNKLESLCAPKTVIKFEDEICGLWVLGTLPDSWEIFRTSLSNSAPNGILSMDLVKSSVL 171

Query: 61  NEEMRRKSQSSSSQSDVLVTEKRGRSKSKGPRGKNRSKSRSDRFANSSWVIDSGASVHVT 120
           NEEMRRKSQSSS QSD LVTE+RGRSKSKGPR        +     SSWVIDSGASVH T
Sbjct: 172 NEEMRRKSQSSSVQSDFLVTERRGRSKSKGPR-------VNLAIQQSSWVIDSGASVHAT 231

Query: 121 SKREFFASYTSGDFGNVRMGNDKSTNTIGIIDVHLKNGNGSRPILKNVKHIPYIRMNLIS 180
           SKREFFASYT GDFG+VRMGND  TN +GI DVHLKN NGSR ILKNVKHIP I MNLIS
Sbjct: 232 SKREFFASYTPGDFGSVRMGNDGPTNVVGIGDVHLKNRNGSRLILKNVKHIPDIHMNLIS 291

Query: 181 TGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKLSSLYYMDAKIIDSDINTMNDEANVKLW 240
           TGKLDD+GFCNTFDNGIWKLTKGSM IA GQK SSLYYMDAKIID DINT+NDEANV+LW
Sbjct: 292 TGKLDDEGFCNTFDNGIWKLTKGSMVIASGQKFSSLYYMDAKIIDYDINTVNDEANVELW 351

Query: 241 HKRLSHIR------------------------------KQTRVTFKSSQHSRKPNVLEL- 300
           HKRLSH+                               KQTRVTFKSSQHSRK NVLEL 
Sbjct: 352 HKRLSHMSEKGLKILTKKNHLHDLKSTPLKRCPHCLAGKQTRVTFKSSQHSRKSNVLELV 411

Query: 301 ------------------------------------TKDQVLQAFKQFHAFIEKETGENL 360
                                               TKDQV   FKQFHA +E+ETGE L
Sbjct: 412 HSNVCGLMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQV---FKQFHASVERETGEKL 471

Query: 361 KCFRTDNG----------------------------------------------VATVIL 420
           KC RTDNG                                              +    L
Sbjct: 472 KCIRTDNGGEYCGPFDEYCRNHGIRHQKTPPKSSQLNGIAKRLNRTLVERVRCLLTESQL 531

Query: 421 RQSFKYSCTCFEFHTM-----CSIGIESSKQNMVSSEQVWTEDRVEEQLAEIVVPTDVS- 480
            QSF         H +       +G E   +     +  ++  RV    A + VP D   
Sbjct: 532 PQSFWGEALNTVIHVLNLTPCVPLGSEVPNRIWSGKDISYSHLRVFGCKAFVHVPKDERS 591

Query: 481 ---------------------------LRRSVRDR-----------------------QP 540
                                       ++ +R R                       +P
Sbjct: 592 KLDAKTKPCVFLGYGQDEFGYRVYDRVKKKLIRSRDVVFVEDQTIADIEKIDEPKSKHKP 651

Query: 541 ESYEEAIEDEHKNEWNDAMKDEMESLHANYTFELVKLPKGKTALNNKW------------ 600
           ESYEEAIEDEHK EWNDAMKDEM+SLHAN+TFELVKL KGKTAL NKW            
Sbjct: 652 ESYEEAIEDEHKREWNDAMKDEMKSLHANHTFELVKLSKGKTALRNKWVYRIKQEEHTSK 711

Query: 601 --------------KKGIDFDEIFAPVVKMSSIRVILGLAASLVLKAPRKWYKKFESVMG 611
                         KK IDFDEIFAPVVKMSSIRV+LGLAASL L+              
Sbjct: 712 PRYKARLVVKGFNQKKDIDFDEIFAPVVKMSSIRVVLGLAASLDLEV------------- 771

BLAST of CSPI01G19390 vs. NCBI nr
Match: RVW22327.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 569.3 bits (1466), Expect = 4.0e-158
Identity = 401/987 (40.63%), Postives = 481/987 (48.73%), Query Frame = 0

Query: 1    MWNKLESLCAPKTGNNKMFLIKQVMELKYQD----------------------------V 60
            +WNKLE L A KTGNNK+FLIK++M LKYQD                            V
Sbjct: 60   LWNKLEQLYARKTGNNKLFLIKKMMSLKYQDGTPMTDHLNTFQGIINQLAGMNIKFEEEV 119

Query: 61   RSL----------------------EYISSMDLVKSSVLNEEMRRKSQSSSSQSDVLVTE 120
            + L                      + I +MDLVKS VLNEEMRRKSQ SSSQS VLV E
Sbjct: 120  QGLWLLGTLPDSWETFRTSLSNSAPDGIMNMDLVKSCVLNEEMRRKSQGSSSQSSVLVIE 179

Query: 121  KRGRSKSKGPRGKNRSKSRSDRFAN----------------------------------- 180
            KRGRSKS+GP+ ++RSKS++++FAN                                   
Sbjct: 180  KRGRSKSRGPKNRDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDMKQGKVKEKKNDN 239

Query: 181  -----------------------------SSWVIDSGASVHVTSKREFFASYTSGDFGNV 240
                                         +SWVIDSGAS+H T +++FF SYTSGDFG+V
Sbjct: 240  GGEDDQVATTTSDFLIVYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGDFGSV 299

Query: 241  RMGNDKSTNTIGIIDVHLKNGNGSRPILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGI 300
            RMGND S   IG+ DV L+  NG+   LKNVKHIP IRMNLISTGKLDD+GFCNTF +  
Sbjct: 300  RMGNDGSAKAIGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQ 359

Query: 301  WKLTKGSMDIAKGQKLSSLYYMDAKIIDSDINTMNDEANVKLWHKRLSHIR--------- 360
            WKLT+GSM IAKG K SSLY M A++IDS IN ++D++  +LWH RL H+          
Sbjct: 360  WKLTRGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAK 419

Query: 361  ---------------------KQTRVTFKSSQHSRKPN-------VLEL-TKDQVLQAFK 420
                                 KQTRV FK+ +H+RKP+       V  L TKDQ+L  FK
Sbjct: 420  KNLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRHTRKPDDHSRKIWVYTLKTKDQMLDVFK 479

Query: 421  QFHAFIEKETGENLKCFRTDNG-------------------------------------- 480
            QFHA +E+++GE LKC RTDNG                                      
Sbjct: 480  QFHALVERQSGEKLKCIRTDNGGEYSGPFDEYCRQHDERSKLDAKTRPCVFIGYGQDELG 539

Query: 481  ------VATVILRQSFKYSCTCFEFHTMCSIGIESSKQNMVSSE---------------- 540
                  V   ++R          E HT+  I   +  ++  S +                
Sbjct: 540  YRFYDPVQKKLVRSR---DVVFMEDHTIQDIEKTNPMESQHSGDLIDLDPAPLTNLPTQV 599

Query: 541  ------------------QVWTEDRVEEQLAEIVVPTDVSLRRSVRDR------------ 600
                              QV  +D V EQ      P D+ LRRS RDR            
Sbjct: 600  EDEAHDDQHDMGDVETPTQVEMDDDVHEQSPAAEAPLDIPLRRSTRDRHPSTRYSVDDYV 659

Query: 601  ------QPESYEEAIEDEHKNEWNDAMKDEMESLHANYTFELVKLPKGKTALNNKW---- 611
                  +PESY EA+EDE+K +W DAM+DEMESLH N++FELVKLPKGK AL N+W    
Sbjct: 660  LLTDGGEPESYVEAMEDENKMKWVDAMQDEMESLHENHSFELVKLPKGKRALKNRWVYRV 719

BLAST of CSPI01G19390 vs. NCBI nr
Match: RVW85908.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 530.0 bits (1364), Expect = 2.7e-146
Identity = 407/1127 (36.11%), Postives = 488/1127 (43.30%), Query Frame = 0

Query: 1    MWNKLESLCAPKTGNNKMFLIKQVMELKYQD----------------------------V 60
            +WNKLE L A KTGNNK+FLIK++M LKYQD                            V
Sbjct: 60   LWNKLEQLYARKTGNNKLFLIKKMMSLKYQDGTPITDHLNTFQGIINQLAGMNIKFEEEV 119

Query: 61   RSL----------------------EYISSMDLVKSSVLNEEMRRKSQSSSSQSDVLVTE 120
            + L                      + I +MDLVKS VLNEEMRRKSQ SSSQS VLV E
Sbjct: 120  QGLWLLGTLPDSWETFRTSLSNSAPDGIMNMDLVKSCVLNEEMRRKSQGSSSQSSVLVIE 179

Query: 121  KRGRSKSKGPRGKNRSKSRSDRFAN----------------------------------- 180
            KRGRSKS+GP+ ++RSKS++++FAN                                   
Sbjct: 180  KRGRSKSRGPKNRDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDMKQGKVKEKKNDN 239

Query: 181  -----------------------------SSWVIDSGASVHVTSKREFFASYTSGDFGNV 240
                                         +SWVIDSGAS+H T +++FF SYTSGDFG+V
Sbjct: 240  GGEDDQVATTTSDFLIVYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGDFGSV 299

Query: 241  RMGNDKSTNTIGIIDVHLKNGNGSRPILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGI 300
            RMGND S   I + DV L+  NG+   LKNVKHIP IRMNLISTGKLDD+GFCNTF +  
Sbjct: 300  RMGNDGSAKAISMRDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQ 359

Query: 301  WKLTKGSMDIAKGQKLSSLYYMDAKIIDSDINTMNDEANVKLWHKRLSHIR--------- 360
            WKLT+GSM IAKG K SSLY M A++IDS IN ++D++  +LWH RL H+          
Sbjct: 360  WKLTRGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAK 419

Query: 361  ---------------------KQTRVTFKSSQHSRKPNVLEL------------------ 420
                                 KQTRV FK+ +H+RKP +L+L                  
Sbjct: 420  KNLLSSMKKGSLKRCAHCLAGKQTRVAFKTLRHTRKPGMLDLVYSDVCGPMKTKTLGGSL 479

Query: 421  -------------------TKDQVLQAFKQFHAFIEKETGENLKCFRTDNG--------- 480
                               TKDQVL  FKQFHA +E+++GE LKC RTDNG         
Sbjct: 480  YFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIRTDNGGEYSGPFDE 539

Query: 481  -------------------------------------VATVILRQSF------------- 540
                                                 ++   L +SF             
Sbjct: 540  YCRQHGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHVLN 599

Query: 541  ---------------------------KYSCTCF-------------------------- 600
                                        + C  F                          
Sbjct: 600  LTPCVPLEFDVPDRIWSNDEISYDHLRVFGCKAFVHIPKDERSKLDAKTRPCVFIGYGQD 659

Query: 601  -----------------------EFHTMCSIGIESSKQNMVSSE---------------- 611
                                   E HT+  I   +  ++  SS+                
Sbjct: 660  ELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEKTNPMESQHSSDLIDLDPVPLANLPTQV 719

BLAST of CSPI01G19390 vs. NCBI nr
Match: RVW88205.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 526.2 bits (1354), Expect = 3.9e-145
Identity = 406/1127 (36.02%), Postives = 486/1127 (43.12%), Query Frame = 0

Query: 1    MWNKLESLCAPKTGNNKMFLIKQVMELKYQD----------------------------V 60
            +WNKLE L A KTGNNK+FLIK++M LKYQD                            V
Sbjct: 60   LWNKLEQLYARKTGNNKLFLIKKMMSLKYQDGTPMTDHLNTFQGIINQLAGMNIKFEEEV 119

Query: 61   RSL----------------------EYISSMDLVKSSVLNEEMRRKSQSSSSQSDVLVTE 120
            + L                      + I +MDLVKS VLNEEMRRKSQ SSSQS VLV E
Sbjct: 120  QGLWLLGTLPDSWETFRTSLSNSAPDGIMNMDLVKSCVLNEEMRRKSQGSSSQSSVLVIE 179

Query: 121  KRGRSKSKGPRGKNRSKSRSDRFAN----------------------------------- 180
            KRGRSKS+GP+ ++RSKS++++FAN                                   
Sbjct: 180  KRGRSKSRGPKNRDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDMKQGKVKEKKNDN 239

Query: 181  -----------------------------SSWVIDSGASVHVTSKREFFASYTSGDFGNV 240
                                         +SWVIDSGAS+H T +++FF SYTSGDFG+V
Sbjct: 240  GGEDDQVATTTSDFLIVYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGDFGSV 299

Query: 241  RMGNDKSTNTIGIIDVHLKNGNGSRPILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGI 300
             MGND S   IG+ DV L+  NG+   LKNVKHIP IRMNLISTGKLDD+GFCNTF +  
Sbjct: 300  MMGNDGSAKAIGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQ 359

Query: 301  WKLTKGSMDIAKGQKLSSLYYMDAKIIDSDINTMNDEANVKLWHKRLSHIR--------- 360
            WKLT+GSM IAKG K SSLY M A++IDS IN ++D++  +LWH RL H+          
Sbjct: 360  WKLTRGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAK 419

Query: 361  ---------------------KQTRVTFKSSQHSRKPNVLEL------------------ 420
                                 KQTRV FK+ +H+RKP +L+L                  
Sbjct: 420  KNLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRHTRKPGMLDLVYSDVCGPMKTKTLGGSL 479

Query: 421  -------------------TKDQVLQAFKQFHAFIEKETGENLKCFRTDNG--------- 480
                               TKDQVL  FKQFHA +E+++GE LKC RTDNG         
Sbjct: 480  YFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIRTDNGGEYSGPFDE 539

Query: 481  -------------------------------------VATVILRQSF------------- 540
                                                 ++   L +SF             
Sbjct: 540  YCRQHGIRHQKTPPKTPQLNGLAERINRTLVERVRCLLSQSQLPRSFWGEALNTVVHVLN 599

Query: 541  ---------------------------KYSCTCF-------------------------- 600
                                        + C  F                          
Sbjct: 600  LTPCVPLEFDVLDRIWSNNEISYDHLRVFGCKAFVHIPKDERSKLDAKTRPCVFIGYGQD 659

Query: 601  -----------------------EFHTMCSIGIESSKQNMVSSE---------------- 611
                                   E HT+  I   +  ++  SS+                
Sbjct: 660  ELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEKTNPMESQHSSDLIDLDPVPLANLPTQV 719

BLAST of CSPI01G19390 vs. NCBI nr
Match: KAA0040427.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 505.0 bits (1299), Expect = 9.3e-139
Identity = 376/827 (45.47%), Postives = 423/827 (51.15%), Query Frame = 0

Query: 1   MWNKLESLCAPKT---------GNNKMFLIKQVMELKYQDVRSL--EYISSMDLVKSSVL 60
           MWNKLESLCAPKT         G   +  +    E+    + +     I SMDLVKSSVL
Sbjct: 112 MWNKLESLCAPKTVIKFEDEICGLWVLGTLPDSWEIFRTSLSNSAPNGILSMDLVKSSVL 171

Query: 61  NEEMRRKSQSSSSQSDVLVTEKRGRSKSKGPRGKNRSKSRSDRFANSSWVIDSGASVHVT 120
           NEEMRRKSQSSS QSD LVTE+RGRSKSKGPR        +     SSWVIDSGASVH T
Sbjct: 172 NEEMRRKSQSSSVQSDFLVTERRGRSKSKGPR-------VNLVIQQSSWVIDSGASVHAT 231

Query: 121 SKREFFASYTSGDFGNVRMGNDKSTNTIGIIDVHLKNGNGSRPILKNVKHIPYIRMNLIS 180
           SKREFFASYT GDFG+VRMGND  TN +GI DVHLKN NGSR ILKNVKHIP I MNLIS
Sbjct: 232 SKREFFASYTPGDFGSVRMGNDGPTNVVGIGDVHLKNRNGSRLILKNVKHIPDIHMNLIS 291

Query: 181 TGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKLSSLYYMDAKIIDSDINTMNDEANVKLW 240
           TGKLDD+GFCNTFDNGIWKLTKGSM IA GQK SSLYYMDAKIID DINT+NDEANV+LW
Sbjct: 292 TGKLDDEGFCNTFDNGIWKLTKGSMVIASGQKFSSLYYMDAKIIDYDINTVNDEANVELW 351

Query: 241 HKRLSHIR------------------------------KQTRVTFKSSQHSRKPNVLEL- 300
           HKRLSH+                               KQTRVTFKSSQHSRK NVLEL 
Sbjct: 352 HKRLSHMSEKGLKILTKKNHLHDLKSTPLKRCPHCLAGKQTRVTFKSSQHSRKSNVLELV 411

Query: 301 ------------------------------------TKDQVLQAFKQFHAFIEKETGENL 360
                                               TKDQV   FKQFHA +E+ETGE L
Sbjct: 412 HSNVCGLMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQV---FKQFHASVERETGEKL 471

Query: 361 KCFRTDNG----------------------------------------------VATVIL 420
           KC RTDNG                                              +    L
Sbjct: 472 KCIRTDNGGEYCGPFDEYCRNHGIRHQKTPPKSSQLNGIAKRLNRTLVERVRCLLTESQL 531

Query: 421 RQSFKYSCTCFEFHTM-----CSIGIESSKQNMVSSEQVWTEDRVEEQLAEIVVPTDVS- 480
            QSF         H +       +G E   +     +  ++  RV    A + VP D   
Sbjct: 532 PQSFWGEALNTVIHVLNLTPCVPLGSEVPNRIWSGKDISYSHLRVFGCKAFVHVPKDERS 591

Query: 481 ---------------------------LRRSVRDR-----------------------QP 540
                                       ++ +R R                       +P
Sbjct: 592 KLDAKTKPCVFLGYGQDEFGYRVYHRVKKKLIRSRDVVFVEDQTIADIEKIDEPKSKHKP 651

Query: 541 ESYEEAIEDEHKNEWNDAMKDEMESLHANYTFELVKLPKGKTALNNKW------------ 600
           ESYEEAIEDEHK EWNDAMKDEM+SLHAN+TFELVKL KGKTAL NKW            
Sbjct: 652 ESYEEAIEDEHKREWNDAMKDEMKSLHANHTFELVKLSKGKTALRNKWVYRIKQEEHTSK 711

Query: 601 --------------KKGIDFDEIFAPVVKMSSIRVILGLAASLVLKAPRKWYKKFESVMG 611
                         KK IDFDEIFAPVVKMSSIRV+LGLAASL L+              
Sbjct: 712 PRYKARLVVKGFNQKKDIDFDEIFAPVVKMSSIRVVLGLAASLDLEV------------- 771

BLAST of CSPI01G19390 vs. NCBI nr
Match: TYJ98688.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 504.2 bits (1297), Expect = 1.6e-138
Identity = 375/827 (45.34%), Postives = 422/827 (51.03%), Query Frame = 0

Query: 1   MWNKLESLCAPKT---------GNNKMFLIKQVMELKYQDVRSL--EYISSMDLVKSSVL 60
           MWNKLESLCAPKT         G   +  +    E+    + +     I SMDLVKSSVL
Sbjct: 112 MWNKLESLCAPKTVIKFEDEICGLWVLGTLPDSWEIFRTSLSNSAPNGILSMDLVKSSVL 171

Query: 61  NEEMRRKSQSSSSQSDVLVTEKRGRSKSKGPRGKNRSKSRSDRFANSSWVIDSGASVHVT 120
           NEEMRRKSQSSS QSD LVTE+RGRSKSKGPR        +     SSWVIDSGASVH T
Sbjct: 172 NEEMRRKSQSSSVQSDFLVTERRGRSKSKGPR-------VNLAIQQSSWVIDSGASVHAT 231

Query: 121 SKREFFASYTSGDFGNVRMGNDKSTNTIGIIDVHLKNGNGSRPILKNVKHIPYIRMNLIS 180
           SKREFFASYT GDFG+VRMGND  TN +GI DVHLKN NGSR ILKNVKHIP I MNLIS
Sbjct: 232 SKREFFASYTPGDFGSVRMGNDGPTNVVGIGDVHLKNRNGSRLILKNVKHIPDIHMNLIS 291

Query: 181 TGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKLSSLYYMDAKIIDSDINTMNDEANVKLW 240
           TGKLDD+GFCNTFDNGIWKLTKGSM IA GQK SSLYYMDAKIID DINT+NDEANV+LW
Sbjct: 292 TGKLDDEGFCNTFDNGIWKLTKGSMVIASGQKFSSLYYMDAKIIDYDINTVNDEANVELW 351

Query: 241 HKRLSHIR------------------------------KQTRVTFKSSQHSRKPNVLEL- 300
           HKRLSH+                               KQTRVTFKSSQHSRK NVLEL 
Sbjct: 352 HKRLSHMSEKGLKILTKKNHLHDLKSTPLKRCPHCLAGKQTRVTFKSSQHSRKSNVLELV 411

Query: 301 ------------------------------------TKDQVLQAFKQFHAFIEKETGENL 360
                                               TKDQV   FKQFHA +E+ETGE L
Sbjct: 412 HSNVCGLMKTKSLGGALYFVTFTDDHSRKIWVYTLKTKDQV---FKQFHASVERETGEKL 471

Query: 361 KCFRTDNG----------------------------------------------VATVIL 420
           KC RTDNG                                              +    L
Sbjct: 472 KCIRTDNGGEYCGPFDEYCRNHGIRHQKTPPKSSQLNGIAKRLNRTLVERVRCLLTESQL 531

Query: 421 RQSFKYSCTCFEFHTM-----CSIGIESSKQNMVSSEQVWTEDRVEEQLAEIVVPTDVS- 480
            QSF         H +       +G E   +     +  ++  RV    A + VP D   
Sbjct: 532 PQSFWGEALNTVIHVLNLTPCVPLGSEVPNRIWSGKDISYSHLRVFGCKAFVHVPKDERS 591

Query: 481 ---------------------------LRRSVRDR-----------------------QP 540
                                       ++ +R R                       +P
Sbjct: 592 KLDAKTKPCVFLGYGQDEFGYRVYDRVKKKLIRSRDVVFVEDQTIADIEKIDEPKSKHKP 651

Query: 541 ESYEEAIEDEHKNEWNDAMKDEMESLHANYTFELVKLPKGKTALNNKW------------ 600
           ESYEEAIEDEHK EWNDAMKDEM+SLHAN+TFELVKL KGKTAL NKW            
Sbjct: 652 ESYEEAIEDEHKREWNDAMKDEMKSLHANHTFELVKLSKGKTALRNKWVYRIKQEEHTSK 711

Query: 601 --------------KKGIDFDEIFAPVVKMSSIRVILGLAASLVLKAPRKWYKKFESVMG 611
                         KK IDFDEIFAPVVKMSSIRV+LGLAASL L+              
Sbjct: 712 PRYKARLVVKGFNQKKDIDFDEIFAPVVKMSSIRVVLGLAASLDLEV------------- 771

BLAST of CSPI01G19390 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 84.7 bits (208), Expect = 2.8e-16
Identity = 67/250 (26.80%), Postives = 106/250 (42.40%), Query Frame = 0

Query: 358 RQPESYEEAIEDEHKNEWNDAMKDEMESLHANYTFELVKLPKGKTALNNKW--------- 417
           ++P +Y EA E      W  AM DE+ ++   +T+E+  LP  K  +  KW         
Sbjct: 84  KEPSTYNEAKE---FLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 418 -----------------KKGIDFDEIFAPVVKMSSIRVILGLAA---------------- 477
                            ++GIDF E F+PV K++S+++IL ++A                
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 478 ------SLVLKAP------------------------------RKWYKKFESVMGEQGYR 530
                  + +K P                              R+W+ KF   +   G+ 
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

BLAST of CSPI01G19390 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 7.6e-06
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 0

Query: 480 LLLYVDDILIVGRNVSRIDNLKKQLSKSFAMKDLGPAKKVLGIQI 525
           LLLYVDDIL+ G + + ++ L  QLS +F+MKDLGP    LGIQI
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI 47

BLAST of CSPI01G19390 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 43.1 bits (100), Expect = 9.3e-04
Identity = 34/123 (27.64%), Postives = 55/123 (44.72%), Query Frame = 0

Query: 358 RQPESYEEAIEDEHKNEWNDAMKDEMESLHANYTFELVKLPKGKTALNNKW--------- 417
           ++P+S   A++D     W  AM++E+++L  N T+ LV  P  +  L  KW         
Sbjct: 26  KEPKSVIFALKDP---GWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSD 85

Query: 418 -----------------KKGIDFDEIFAPVVKMSSIRVILGLAASLVLKAPRKWYKKFES 455
                            ++GI F E ++PVV+ ++IR IL +A  L +     W  K   
Sbjct: 86  GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLEVGQSINWMFKMHF 145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P109781.7e-7127.90Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041464.5e-1123.53Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q94HW23.6e-0823.67Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT945.7e-0622.22Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P925191.1e-0457.78Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A438CGI41.9e-15840.63Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A438HN891.3e-14636.11Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A438HUT41.9e-14536.02Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A5A7TFU14.5e-13945.47Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3BKF77.7e-13945.34Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
Match NameE-valueIdentityDescription
RVW22327.14.0e-15840.63Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
RVW85908.12.7e-14636.11Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
RVW88205.13.9e-14536.02Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
KAA0040427.19.3e-13945.47Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
TYJ98688.11.6e-13845.34Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
Match NameE-valueIdentityDescription
AT4G23160.12.8e-1626.80cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.17.6e-0657.78DNA/RNA polymerases superfamily protein [more]
ATMG00820.19.3e-0427.64Reverse transcriptase (RNA-dependent DNA polymerase) [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 440..528
e-value: 1.3E-18
score: 67.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..68
NoneNo IPR availablePANTHERPTHR34676:SF12ZINC FINGER, CCHC-TYPE, RIBONUCLEASE H-LIKE DOMAIN, GAG-PRE-INTEGRASE DOMAIN PROTEIN-RELATEDcoord: 96..211
NoneNo IPR availablePANTHERPTHR34676FAMILY NOT NAMEDcoord: 96..211

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G19390.1CSPI01G19390.1mRNA