CSPI01G19150 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G19150
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ribonuclease H
Location	Chr1: 14547439 .. 14548830 (+)
RNA-Seq Expression	CSPI01G19150
Synteny	CSPI01G19150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTACACTTTTTAATGATATGATGCATAAGGAAATAGAGGTGTATGTTGATAATATGATTGCAAAATCCAAGGCAAATGAAGATCATACAACTATACTTCAAAAATTATTTGATCGGTTGAGAAAGTATCAATTTAAATTAAATCCATCCAAATGTACATTTGGGGAGACCTCGGGAAAACTGTTGGGACTCATTGTCAGTGAAGAAGGGATCAAAGTAGACCTAGGTAAAGTGAAGGTTATCATGGACATGCCATCCCCTGAAACAGAAAAAGAAGTTCGAGCTTTTCTTGGAAGACTGAATTACATATCCAGATTCATCTCGCATTTGACCCCAACCTGCGAACCAATCTTCAAGCTTTTACGTAAAAATAATCCAGGAAAATGGAATGAGGATTGTGAAGAAGCTTTCAACAAAATTAAGCAATATCTACAGAGCCCACATGTATTGATACCTCCAGCTCCAGGACGGCCGTTAATCCTATACTTGATAGTTTTAGAAGGTTCTATGGGTGGTGTTCTAGGAGAACATGACTTATTAGGGAAGAAAGAGCACGCTATTTATTATTTAAGCAAAAAATTCACCGATTATGAGTCGAAATACTCAATGTTAGAGCGAACTTGTTGTGCTTTGGTATGGACCGCTCACCGTTTGAGGCAATATATGTTATATCATACGACATGGCTTATTTCAAAAATGGATCCAATAAAATACATTTTTGAGAAACCGTCATTATCTGGTAGAATTGCAAAGTGGCAAGTTTTGTTGTCAGAGTATGATATTGTTTATGTTACTAAAAAAGCAACAAAGGGAAGTGCACTTGCTGATCATTTAGCTGCCCAACCAGTAGCAGATTATGAGCCAATGAGGGTTGATTTTCCTGATGAAAACATATTTCTAGTTGAAAATGATGCTACAGATCATGAGACATGGATTATGCTTTTTGATGGTGCCTCAAATGAGTTGGGACACGAGATTGTTGTTGTACTAATTTCCCCAAAAGGAAAGGTATTTCCCCTAACAGCTAAGTTATGTTTTGAATGCACTTACAATATTGCTGAATATGAAGCTTGTATTATGGGACTTCAAACAGCAATCAACATGAGTGTTAAAAAGTTGAAAGTTTTGGGTGACTCAATGCTAGTAATAAATCAAGTCAAAGGGTGGCTAATGCATCTGCCATTCGATTGTCTTCCCTATGAACATGGTCAAATGAAATTTTCTCAAAATTTTGAGAAAATTTCATTTGACCATGTTCATAGGGAAGACAATCGAATGTCTGATGCATTAGCCACCCTGACAGTCATGTTTAATCTTAATCTTGAGTGCGAGCTTTATCCAATCCAAATTACGAAAAGAGATGCGCCGACATATTGCATGAATATGTAA

mRNA sequence

ATGGTTACACTTTTTAATGATATGATGCATAAGGAAATAGAGGTGTATGTTGATAATATGATTGCAAAATCCAAGGCAAATGAAGATCATACAACTATACTTCAAAAATTATTTGATCGGTTGAGAAAGTATCAATTTAAATTAAATCCATCCAAATGTACATTTGGGGAGACCTCGGGAAAACTGTTGGGACTCATTGTCAGTGAAGAAGGGATCAAAGTAGACCTAGGTAAAGTGAAGGTTATCATGGACATGCCATCCCCTGAAACAGAAAAAGAAGTTCGAGCTTTTCTTGGAAGACTGAATTACATATCCAGATTCATCTCGCATTTGACCCCAACCTGCGAACCAATCTTCAAGCTTTTACGTAAAAATAATCCAGGAAAATGGAATGAGGATTGTGAAGAAGCTTTCAACAAAATTAAGCAATATCTACAGAGCCCACATGTATTGATACCTCCAGCTCCAGGACGGCCGTTAATCCTATACTTGATAGTTTTAGAAGGTTCTATGGGTGGTGTTCTAGGAGAACATGACTTATTAGGGAAGAAAGAGCACGCTATTTATTATTTAAGCAAAAAATTCACCGATTATGAGTCGAAATACTCAATGTTAGAGCGAACTTGTTGTGCTTTGGTATGGACCGCTCACCGTTTGAGGCAATATATGTTATATCATACGACATGGCTTATTTCAAAAATGGATCCAATAAAATACATTTTTGAGAAACCGTCATTATCTGGTAGAATTGCAAAGTGGCAAGTTTTGTTGTCAGAGTATGATATTGTTTATGTTACTAAAAAAGCAACAAAGGGAAGTGCACTTGCTGATCATTTAGCTGCCCAACCAGTAGCAGATTATGAGCCAATGAGGGTTGATTTTCCTGATGAAAACATATTTCTAGTTGAAAATGATGCTACAGATCATGAGACATGGATTATGCTTTTTGATGGTGCCTCAAATGAGTTGGGACACGAGATTGTTGTTGTACTAATTTCCCCAAAAGGAAAGGTATTTCCCCTAACAGCTAAGTTATGTTTTGAATGCACTTACAATATTGCTGAATATGAAGCTTGTATTATGGGACTTCAAACAGCAATCAACATGAGTGTTAAAAAGTTGAAAGTTTTGGGTGACTCAATGCTAGTAATAAATCAAGTCAAAGGGTGGCTAATGCATCTGCCATTCGATTGTCTTCCCTATGAACATGGTCAAATGAAATTTTCTCAAAATTTTGAGAAAATTTCATTTGACCATGTTCATAGGGAAGACAATCGAATGTCTGATGCATTAGCCACCCTGACAGTCATGTTTAATCTTAATCTTGAGTGCGAGCTTTATCCAATCCAAATTACGAAAAGAGATGCGCCGACATATTGCATGAATATGTAA

Coding sequence (CDS)

ATGGTTACACTTTTTAATGATATGATGCATAAGGAAATAGAGGTGTATGTTGATAATATGATTGCAAAATCCAAGGCAAATGAAGATCATACAACTATACTTCAAAAATTATTTGATCGGTTGAGAAAGTATCAATTTAAATTAAATCCATCCAAATGTACATTTGGGGAGACCTCGGGAAAACTGTTGGGACTCATTGTCAGTGAAGAAGGGATCAAAGTAGACCTAGGTAAAGTGAAGGTTATCATGGACATGCCATCCCCTGAAACAGAAAAAGAAGTTCGAGCTTTTCTTGGAAGACTGAATTACATATCCAGATTCATCTCGCATTTGACCCCAACCTGCGAACCAATCTTCAAGCTTTTACGTAAAAATAATCCAGGAAAATGGAATGAGGATTGTGAAGAAGCTTTCAACAAAATTAAGCAATATCTACAGAGCCCACATGTATTGATACCTCCAGCTCCAGGACGGCCGTTAATCCTATACTTGATAGTTTTAGAAGGTTCTATGGGTGGTGTTCTAGGAGAACATGACTTATTAGGGAAGAAAGAGCACGCTATTTATTATTTAAGCAAAAAATTCACCGATTATGAGTCGAAATACTCAATGTTAGAGCGAACTTGTTGTGCTTTGGTATGGACCGCTCACCGTTTGAGGCAATATATGTTATATCATACGACATGGCTTATTTCAAAAATGGATCCAATAAAATACATTTTTGAGAAACCGTCATTATCTGGTAGAATTGCAAAGTGGCAAGTTTTGTTGTCAGAGTATGATATTGTTTATGTTACTAAAAAAGCAACAAAGGGAAGTGCACTTGCTGATCATTTAGCTGCCCAACCAGTAGCAGATTATGAGCCAATGAGGGTTGATTTTCCTGATGAAAACATATTTCTAGTTGAAAATGATGCTACAGATCATGAGACATGGATTATGCTTTTTGATGGTGCCTCAAATGAGTTGGGACACGAGATTGTTGTTGTACTAATTTCCCCAAAAGGAAAGGTATTTCCCCTAACAGCTAAGTTATGTTTTGAATGCACTTACAATATTGCTGAATATGAAGCTTGTATTATGGGACTTCAAACAGCAATCAACATGAGTGTTAAAAAGTTGAAAGTTTTGGGTGACTCAATGCTAGTAATAAATCAAGTCAAAGGGTGGCTAATGCATCTGCCATTCGATTGTCTTCCCTATGAACATGGTCAAATGAAATTTTCTCAAAATTTTGAGAAAATTTCATTTGACCATGTTCATAGGGAAGACAATCGAATGTCTGATGCATTAGCCACCCTGACAGTCATGTTTAATCTTAATCTTGAGTGCGAGCTTTATCCAATCCAAATTACGAAAAGAGATGCGCCGACATATTGCATGAATATGTAA

Protein sequence

MVTLFNDMMHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSGKLLGLIVSEEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGEHDLLGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKATKGSALADHLAAQPVADYEPMRVDFPDENIFLVENDATDHETWIMLFDGASNELGHEIVVVLISPKGKVFPLTAKLCFECTYNIAEYEACIMGLQTAINMSVKKLKVLGDSMLVINQVKGWLMHLPFDCLPYEHGQMKFSQNFEKISFDHVHREDNRMSDALATLTVMFNLNLECELYPIQITKRDAPTYCMNM*

Homology

[Close]

BLAST of CSPI01G19150 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.4e-28
Identity = 75/271 (27.68%), Postives = 134/271 (49.45%), Query Frame = 0


Query: 1   MVTLFNDMMHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSG 60
           M  +   +++K   VY+D++I  S + ++H   L  +F++L K   KL   KC F +   
Sbjct: 349 MNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQET 408

Query: 61  KLLGLIVSEEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 120
             LG +++ +GIK +  K++ I   P P   KE++AFLG   Y  +FI +     +P+ K
Sbjct: 409 TFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTK 468

Query: 121 LLRKN-NPGKWNEDCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGEHD 180
            L+KN      N + + AF K+K  +    +L  P   +   L     + ++G VL +  
Sbjct: 469 CLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDG 528

Query: 181 LLGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKY 240
                 H + Y+S+   ++E  YS +E+   A+VW     R Y+L     + S   P+ +
Sbjct: 529 ------HPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSW 588

Query: 241 IFEKPSLSGRIAKWQVLLSE--YDIVYVTKK 269
           ++     + ++ +W+V LSE  +DI Y+  K
Sbjct: 589 LYRMKDPNSKLTRWRVKLSEFDFDIKYIKGK 613

[Close]

BLAST of CSPI01G19150 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.2e-27
Identity = 80/281 (28.47%), Postives = 136/281 (48.40%), Query Frame = 0


Query: 1   MVTLFNDMMHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSG 60
           M  +   +++K   VY+D++I  S +  +H   +Q +F +L     KL   KC F +   
Sbjct: 348 MNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEA 407

Query: 61  KLLGLIVSEEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 120
             LG IV+ +GIK +  KVK I+  P P  +KE+RAFLG   Y  +FI +     +P+  
Sbjct: 408 NFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTS 467

Query: 121 LLRKNNPGKWNE-DCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGEHD 180
            L+K       + +  EAF K+K  +    +L  P   +  +L       ++G VL ++ 
Sbjct: 468 CLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNG 527

Query: 181 LLGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKY 240
                 H I ++S+   D+E  YS +E+   A+VW     R Y+L     + S   P+++
Sbjct: 528 ------HPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRW 587

Query: 241 IFEKPSLSGRIAKWQVLLSEYDIVYVTKKATKGSALADHLA 281
           +        ++ +W+V LSEY       K  K +++AD L+
Sbjct: 588 LHNLKEPGAKLERWRVRLSEYQFKIDYIKG-KENSVADALS 621

[Close]

BLAST of CSPI01G19150 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 8.3e-26
Identity = 80/312 (25.64%), Postives = 150/312 (48.08%), Query Frame = 0


Query: 3   TLFNDMMHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSGKL 62
           T+  ++    +  Y+DN++  SK+  +H   ++ +  +L+     +N +KC F ++  K 
Sbjct: 551 TILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKF 610

Query: 63  LGLIVSEEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFKLL 122
           +G  +SE+G       +  ++    P+  KE+R FLG +NY+ +FI   +    P+  LL
Sbjct: 611 IGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLL 670

Query: 123 RKNNPGKWNEDCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGE-HDLL 182
           +K+   KW     +A   IKQ L SP VL      + ++L     + ++G VL + HD  
Sbjct: 671 KKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHD-- 730

Query: 183 GKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYIF 242
             K + + Y S K +  +  YS+ ++   A++ +    R Y       L S ++P K + 
Sbjct: 731 DDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHY-------LESTIEPFKILT 790

Query: 243 EKPSLSGRI-----------AKWQVLLSEYDIVYVTKKATKGSALADHLAAQPVADYEPM 302
           +  +L GRI           A+WQ+ L +++   +  +    + +AD L ++ V + EP+
Sbjct: 791 DHRNLIGRITNESEPENKRLARWQLFLQDFNF-EINYRPGSANHIADAL-SRIVDETEPI 850

[Close]

BLAST of CSPI01G19150 vs. ExPASy Swiss-Prot
Match: P0CT42 (Transposon Tf2-7 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-7 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 8.3e-26
Identity = 80/312 (25.64%), Postives = 150/312 (48.08%), Query Frame = 0


Query: 3   TLFNDMMHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSGKL 62
           T+  ++    +  Y+DN++  SK+  +H   ++ +  +L+     +N +KC F ++  K 
Sbjct: 551 TILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKF 610

Query: 63  LGLIVSEEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFKLL 122
           +G  +SE+G       +  ++    P+  KE+R FLG +NY+ +FI   +    P+  LL
Sbjct: 611 IGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLL 670

Query: 123 RKNNPGKWNEDCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGE-HDLL 182
           +K+   KW     +A   IKQ L SP VL      + ++L     + ++G VL + HD  
Sbjct: 671 KKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHD-- 730

Query: 183 GKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYIF 242
             K + + Y S K +  +  YS+ ++   A++ +    R Y       L S ++P K + 
Sbjct: 731 DDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHY-------LESTIEPFKILT 790

Query: 243 EKPSLSGRI-----------AKWQVLLSEYDIVYVTKKATKGSALADHLAAQPVADYEPM 302
           +  +L GRI           A+WQ+ L +++   +  +    + +AD L ++ V + EP+
Sbjct: 791 DHRNLIGRITNESEPENKRLARWQLFLQDFNF-EINYRPGSANHIADAL-SRIVDETEPI 850

[Close]

BLAST of CSPI01G19150 vs. ExPASy Swiss-Prot
Match: P0CT43 (Transposon Tf2-8 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-8 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 8.3e-26
Identity = 80/312 (25.64%), Postives = 150/312 (48.08%), Query Frame = 0


Query: 3   TLFNDMMHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSGKL 62
           T+  ++    +  Y+DN++  SK+  +H   ++ +  +L+     +N +KC F ++  K 
Sbjct: 551 TILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKF 610

Query: 63  LGLIVSEEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFKLL 122
           +G  +SE+G       +  ++    P+  KE+R FLG +NY+ +FI   +    P+  LL
Sbjct: 611 IGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLL 670

Query: 123 RKNNPGKWNEDCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGE-HDLL 182
           +K+   KW     +A   IKQ L SP VL      + ++L     + ++G VL + HD  
Sbjct: 671 KKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHD-- 730

Query: 183 GKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYIF 242
             K + + Y S K +  +  YS+ ++   A++ +    R Y       L S ++P K + 
Sbjct: 731 DDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHY-------LESTIEPFKILT 790

Query: 243 EKPSLSGRI-----------AKWQVLLSEYDIVYVTKKATKGSALADHLAAQPVADYEPM 302
           +  +L GRI           A+WQ+ L +++   +  +    + +AD L ++ V + EP+
Sbjct: 791 DHRNLIGRITNESEPENKRLARWQLFLQDFNF-EINYRPGSANHIADAL-SRIVDETEPI 850

[Close]

BLAST of CSPI01G19150 vs. ExPASy TrEMBL
Match: A0A5D3DMD2 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160 PE=4 SV=1)

HSP 1 Score: 798.9 bits (2062), Expect = 1.1e-227
Identity = 394/463 (85.10%), Postives = 418/463 (90.28%), Query Frame = 0


Query: 1   MVTLFNDMMHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSG 60
           MVTLF+DMMHKEIEVYVD+MIAKSK +EDHTT LQKLFDRLRKYQ KLNPSKCTFG T G
Sbjct: 86  MVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATLG 145

Query: 61  KLLGLIVSEEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 120
           KLLG IVSEEGIKVD  KV+ IM+MPSP+TEKE+R FLGRLNYISRFIS+LTPTCEPIFK
Sbjct: 146 KLLGFIVSEEGIKVDPDKVRAIMEMPSPKTEKEIRGFLGRLNYISRFISYLTPTCEPIFK 205

Query: 121 LLRKNNPGKWNEDCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGEHDL 180
           LLRKNNPGKWNEDCEEAFNKIKQYLQSP VLIPPAPGRPLILYL VLE SMGGVLG+HDL
Sbjct: 206 LLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMGGVLGQHDL 265

Query: 181 LGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI 240
            GKKEHAIYYLSKKFTDYES+YSMLERTCCALVWTAHRLRQYMLYHTT LISKMD IKYI
Sbjct: 266 SGKKEHAIYYLSKKFTDYESRYSMLERTCCALVWTAHRLRQYMLYHTTCLISKMDRIKYI 325

Query: 241 FEKPSLSGRIAKWQVLLSEYDIVYVTKKATKGSALADHLAAQPVADYEPMRVDFPDENIF 300
           FEKPSLSGRIAKWQVLLSEYDIVYVTKKA KGSA+ADHLAAQPVADYEPMR+DFPD+NIF
Sbjct: 326 FEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRIDFPDDNIF 385

Query: 301 LVENDATDHETWIMLFDGASNELGHEIVVVLISPKGKVFPLTAKLCFECTYNIAEYEACI 360
           LVE +A DHETW MLFDGASNELGH I VVLISP+GKVFPLTAKLCFECT+NIAEYEACI
Sbjct: 386 LVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACI 445

Query: 361 MGLQTAINMSVKKLKVLGDSMLVINQVKGWLMHLPFDCLPYEHGQMKFSQNFEKISFDHV 420
           MGLQ A +MS+KKLKVLGDSMLVI+QVK          +PY     K SQNFEKISFDHV
Sbjct: 446 MGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 505

Query: 421 HREDNRMSDALATLTVMFNLNLECELYPIQITKRDAPTYCMNM 464
            REDNRM+DALATL VMF+LNLE EL+PIQITKRD P YCMN+
Sbjct: 506 PREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNV 548

[Close]

BLAST of CSPI01G19150 vs. ExPASy TrEMBL
Match: A0A5A7T7R4 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002820 PE=4 SV=1)

HSP 1 Score: 794.3 bits (2050), Expect = 2.8e-226
Identity = 390/463 (84.23%), Postives = 416/463 (89.85%), Query Frame = 0


Query: 1    MVTLFNDMMHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSG 60
            MVTLF+DMMHKEIEVYVD+MIAKSK +EDHTT LQKLFDRLRKYQ KLNPSKC FG TSG
Sbjct: 1055 MVTLFHDMMHKEIEVYVDDMIAKSKVDEDHTTTLQKLFDRLRKYQLKLNPSKCIFGATSG 1114

Query: 61   KLLGLIVSEEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 120
            KLLG IVSEEGIKVD  KV+ IM+MPSP+TEKE+R FLGRLNYISRFISHLTPTCEPIFK
Sbjct: 1115 KLLGFIVSEEGIKVDPDKVRAIMEMPSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFK 1174

Query: 121  LLRKNNPGKWNEDCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGEHDL 180
            LL KNNPGKWNEDCEEAFNKIKQYLQSP VL+PPAPGRPLILYL VLE SMGGVLG+HDL
Sbjct: 1175 LLHKNNPGKWNEDCEEAFNKIKQYLQSPPVLMPPAPGRPLILYLTVLESSMGGVLGQHDL 1234

Query: 181  LGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI 240
             GKK+H IYYLSKKFT+YES+YSMLERTCC LVWTAHRLRQYMLYHTT LISKMDPIKYI
Sbjct: 1235 SGKKKHVIYYLSKKFTNYESRYSMLERTCCTLVWTAHRLRQYMLYHTTCLISKMDPIKYI 1294

Query: 241  FEKPSLSGRIAKWQVLLSEYDIVYVTKKATKGSALADHLAAQPVADYEPMRVDFPDENIF 300
            FEKPSLSGRIAKWQVLLSEYDIVYVTKKA K SA+ADHLAAQPVADYEPMR+DFPD+NIF
Sbjct: 1295 FEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKESAVADHLAAQPVADYEPMRIDFPDDNIF 1354

Query: 301  LVENDATDHETWIMLFDGASNELGHEIVVVLISPKGKVFPLTAKLCFECTYNIAEYEACI 360
            LVE +A DHETW MLFDGASNELGHEI VVLISP+GKVFPLTAKLCFECT+NIAEYEACI
Sbjct: 1355 LVEKNARDHETWTMLFDGASNELGHEIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACI 1414

Query: 361  MGLQTAINMSVKKLKVLGDSMLVINQVKGWLMHLPFDCLPYEHGQMKFSQNFEKISFDHV 420
            MGLQ A +MS+KKLKVLGDSMLVI+QVK          +PY     K SQNFEKISFDHV
Sbjct: 1415 MGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLSQNFEKISFDHV 1474

Query: 421  HREDNRMSDALATLTVMFNLNLECELYPIQITKRDAPTYCMNM 464
             REDNRM+DALATL VMF+LNLE EL+PIQITKRD P YCMN+
Sbjct: 1475 PREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNV 1517

[Close]

BLAST of CSPI01G19150 vs. ExPASy TrEMBL
Match: A0A5A7T0A1 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00070 PE=4 SV=1)

HSP 1 Score: 790.8 bits (2041), Expect = 3.1e-225
Identity = 392/463 (84.67%), Postives = 415/463 (89.63%), Query Frame = 0


Query: 1   MVTLFNDMMHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSG 60
           MVTLF+DMMHKEIEVYVD+MIAKSK +EDHTT LQKLFDRLRKYQ KLNPSKCTFG TSG
Sbjct: 1   MVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSG 60

Query: 61  KLLGLIVSEEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 120
           KLLG IVSEEGIKVD  KV+ IM+MPSP+TEKE+R FLGRLNYISRFISHLTPTCEPIFK
Sbjct: 61  KLLGFIVSEEGIKVDPDKVRAIMEMPSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFK 120

Query: 121 LLRKNNPGKWNEDCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGEHDL 180
           LLRKNNPGKWNEDCEEAFNKIKQYLQSP VLIPPAPGRPLILYL VLE S+ GVLG+HDL
Sbjct: 121 LLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSVDGVLGQHDL 180

Query: 181 LGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI 240
            GKKEHAIYYLSKKFTDYES+YSMLERTCCALVWTAH LRQYMLYHTT LISKMDPIKYI
Sbjct: 181 SGKKEHAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYI 240

Query: 241 FEKPSLSGRIAKWQVLLSEYDIVYVTKKATKGSALADHLAAQPVADYEPMRVDFPDENIF 300
           FEKPSLSGRIAKWQVLLSEYDIVYVTKKA KGSA+ADHLAAQPVADYEPMR+DF DENIF
Sbjct: 241 FEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRIDFLDENIF 300

Query: 301 LVENDATDHETWIMLFDGASNELGHEIVVVLISPKGKVFPLTAKLCFECTYNIAEYEACI 360
           LVE +A DHETW MLFDGASNELGH I VVLIS +GKVF LTAKLCFECT+NIAEYEACI
Sbjct: 301 LVEKNARDHETWTMLFDGASNELGHGIGVVLISSEGKVFSLTAKLCFECTHNIAEYEACI 360

Query: 361 MGLQTAINMSVKKLKVLGDSMLVINQVKGWLMHLPFDCLPYEHGQMKFSQNFEKISFDHV 420
           MGLQ A +MS+KKLKVLGDSMLVI+QVK          +PY     K SQNFEKISFDHV
Sbjct: 361 MGLQVAWDMSIKKLKVLGDSMLVIHQVKEEWEIRDAKLVPYSQYVTKLSQNFEKISFDHV 420

Query: 421 HREDNRMSDALATLTVMFNLNLECELYPIQITKRDAPTYCMNM 464
            REDNRM+DALATL VMF+LNLE EL+PIQITKRD P YCMN+
Sbjct: 421 PREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNV 463

[Close]

BLAST of CSPI01G19150 vs. ExPASy TrEMBL
Match: A0A5A7TRL7 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010 PE=4 SV=1)

HSP 1 Score: 769.6 bits (1986), Expect = 7.3e-219
Identity = 381/462 (82.47%), Postives = 410/462 (88.74%), Query Frame = 0


Query: 2    VTLFNDMMHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSGK 61
            +TL+    +K   VYVD+MIAKSK +EDHTT LQKLFDRLRKYQ KLNPSKCTFG TS K
Sbjct: 931  ITLWGTFCYK---VYVDDMIAKSKVDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSRK 990

Query: 62   LLGLIVSEEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFKL 121
            LLG IVSEEGIKVD  KV+ IM+M SP+TEKE+R FLGRLNYISRFISHLTPTC+PIFKL
Sbjct: 991  LLGFIVSEEGIKVDPDKVRAIMEMLSPKTEKEIRGFLGRLNYISRFISHLTPTCKPIFKL 1050

Query: 122  LRKNNPGKWNEDCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGEHDLL 181
            LRKNNPGKWNEDCEEAFNKIKQYLQSP VLIPPAPGRPLILYL VLE SMGGVLG+HDL 
Sbjct: 1051 LRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMGGVLGQHDLS 1110

Query: 182  GKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYIF 241
            GKKEHAIYYLSKKFT+YES+YSMLERTCCALVWTAHRLRQYMLYHTT LISKMDPIKYIF
Sbjct: 1111 GKKEHAIYYLSKKFTNYESRYSMLERTCCALVWTAHRLRQYMLYHTTCLISKMDPIKYIF 1170

Query: 242  EKPSLSGRIAKWQVLLSEYDIVYVTKKATKGSALADHLAAQPVADYEPMRVDFPDENIFL 301
            EKPSLSGRIAKWQVLLSEYDIVYVTKKA KGSA+ADHLAAQPVADYEPMR+DFPD+NIFL
Sbjct: 1171 EKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRIDFPDDNIFL 1230

Query: 302  VENDATDHETWIMLFDGASNELGHEIVVVLISPKGKVFPLTAKLCFECTYNIAEYEACIM 361
            VE +A DHETW MLFDGASNELGH I VVLISP+GKVFPLTAKLCFECT+NIAEYEACIM
Sbjct: 1231 VEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIM 1290

Query: 362  GLQTAINMSVKKLKVLGDSMLVINQVKGWLMHLPFDCLPYEHGQMKFSQNFEKISFDHVH 421
            GL+ A +MS+KKLKVLGDSMLVI+QVK          +PY     K SQNFEKISFDHV 
Sbjct: 1291 GLRVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLSQNFEKISFDHVP 1350

Query: 422  REDNRMSDALATLTVMFNLNLECELYPIQITKRDAPTYCMNM 464
            REDNRM+DALATL +MF+LNLE EL+PIQITKRD P YCMN+
Sbjct: 1351 REDNRMADALATLAMMFDLNLEFELHPIQITKRDVPAYCMNV 1389

[Close]

BLAST of CSPI01G19150 vs. ExPASy TrEMBL
Match: A0A5D3CYI0 (Protein NYNRIN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003740 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 2.4e-193
Identity = 336/380 (88.42%), Postives = 353/380 (92.89%), Query Frame = 0


Query: 9   MHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSGKLLGLIVS 68
           M KEIEVYVD+MIAKSK +EDHTT LQKLFDRLRKYQ KLNPSKCTFG TSGKLLG IVS
Sbjct: 122 MAKEIEVYVDDMIAKSKVDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVS 181

Query: 69  EEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFKLLRKNNPG 128
           EEGI+V   KV+ IM+M SP+TEKE+R FLGRLNYISRFISHLTPTCEPIFKLLRKNNPG
Sbjct: 182 EEGIRVYPDKVRAIMEMSSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPG 241

Query: 129 KWNEDCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGEHDLLGKKEHAI 188
           KWNEDCEEAFNKIKQYLQSP VLIPPA GRPLILYL VLE  MGGVLG+HDL GKKEHAI
Sbjct: 242 KWNEDCEEAFNKIKQYLQSPPVLIPPAQGRPLILYLTVLESFMGGVLGQHDLSGKKEHAI 301

Query: 189 YYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYIFEKPSLSG 248
           YYLSKKFTDYES+YSMLERTCCALVWTAHRLRQYMLYHTT LISKMDPIKYIFEKPSLSG
Sbjct: 302 YYLSKKFTDYESRYSMLERTCCALVWTAHRLRQYMLYHTTCLISKMDPIKYIFEKPSLSG 361

Query: 249 RIAKWQVLLSEYDIVYVTKKATKGSALADHLAAQPVADYEPMRVDFPDENIFLVENDATD 308
           RIAKWQVLLSEYDIVYVTKKA KGSA+ADHLAAQPVADYEPMR+DFPDENIFLVE +A D
Sbjct: 362 RIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRIDFPDENIFLVEKNARD 421

Query: 309 HETWIMLFDGASNELGHEIVVVLISPKGKVFPLTAKLCFECTYNIAEYEACIMGLQTAIN 368
           HETW MLFDGASNELGH I VVLISP+GKVFPLTAKLCFECT+NIAEYEACIMGLQ A +
Sbjct: 422 HETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQVACD 481

Query: 369 MSVKKLKVLGDSMLVINQVK 389
           MS+KKLKVLGDSMLVI+QVK
Sbjct: 482 MSIKKLKVLGDSMLVIHQVK 501

[Close]

BLAST of CSPI01G19150 vs. NCBI nr
Match: XP_031742360.1 (uncharacterized protein LOC116404324 [Cucumis sativus])

HSP 1 Score: 850.5 bits (2196), Expect = 6.8e-243
Identity = 422/463 (91.14%), Postives = 431/463 (93.09%), Query Frame = 0


Query: 1    MVTLFNDMMHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSG 60
            MVTLF+DMMHKEIEVYVD+MIAKSKANEDHTTILQKLFDRLRKYQ KLNPSKCTFG TSG
Sbjct: 1419 MVTLFHDMMHKEIEVYVDDMIAKSKANEDHTTILQKLFDRLRKYQLKLNPSKCTFGATSG 1478

Query: 61   KLLGLIVSEEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 120
            KLLG IVSEEGIKVD  KVK IMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK
Sbjct: 1479 KLLGFIVSEEGIKVDPDKVKAIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 1538

Query: 121  LLRKNNPGKWNEDCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGEHDL 180
            LLRKNNPGKWNEDCEEAFNKIKQYLQSP VLIPPAPGRPLILYL VLEGSMGGVLG+HDL
Sbjct: 1539 LLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLEGSMGGVLGQHDL 1598

Query: 181  LGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI 240
             GKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI
Sbjct: 1599 SGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI 1658

Query: 241  FEKPSLSGRIAKWQVLLSEYDIVYVTKKATKGSALADHLAAQPVADYEPMRVDFPDENIF 300
            FEKPSLSGRIAKWQVLLSEYDIVYVTKKA KGSALADHLAAQPVADYEPM VDFPDENIF
Sbjct: 1659 FEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSALADHLAAQPVADYEPMSVDFPDENIF 1718

Query: 301  LVENDATDHETWIMLFDGASNELGHEIVVVLISPKGKVFPLTAKLCFECTYNIAEYEACI 360
            LVENDATDHETWIMLFDGASNELGH I VVLISPKGKVFPLTAKLCFECT+NIAEYEACI
Sbjct: 1719 LVENDATDHETWIMLFDGASNELGHGIGVVLISPKGKVFPLTAKLCFECTHNIAEYEACI 1778

Query: 361  MGLQTAINMSVKKLKVLGDSMLVINQVKGWLMHLPFDCLPYEHGQMKFSQNFEKISFDHV 420
            MGLQ AI+MSVKKLKVLGDSMLVI+QVK          +PY     K SQNFEKISFDHV
Sbjct: 1779 MGLQAAIDMSVKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYIAKLSQNFEKISFDHV 1838

Query: 421  HREDNRMSDALATLTVMFNLNLECELYPIQITKRDAPTYCMNM 464
            HREDNRM+DALATL VMFNLNLE ELYPIQITKRDAPTYCMN+
Sbjct: 1839 HREDNRMADALATLAVMFNLNLEYELYPIQITKRDAPTYCMNI 1881

[Close]

BLAST of CSPI01G19150 vs. NCBI nr
Match: XP_031737561.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC116402452 [Cucumis sativus])

HSP 1 Score: 848.6 bits (2191), Expect = 2.6e-242
Identity = 421/463 (90.93%), Postives = 430/463 (92.87%), Query Frame = 0


Query: 1    MVTLFNDMMHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSG 60
            MVTLF+DMMHKEIEVYVD+MIAKSKANEDHTTILQKLFDRLRKYQ KLNPSKCTFG TSG
Sbjct: 1408 MVTLFHDMMHKEIEVYVDDMIAKSKANEDHTTILQKLFDRLRKYQLKLNPSKCTFGATSG 1467

Query: 61   KLLGLIVSEEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 120
            KLLG IVSEEGIKVD  KVK IMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK
Sbjct: 1468 KLLGFIVSEEGIKVDPDKVKAIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 1527

Query: 121  LLRKNNPGKWNEDCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGEHDL 180
            LLRKNNPGKWNEDCEEAFNKIKQYLQSP VLIPPAPGRPLILYL VLEGSMGGVLG+HDL
Sbjct: 1528 LLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLEGSMGGVLGQHDL 1587

Query: 181  LGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI 240
             GKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI
Sbjct: 1588 SGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI 1647

Query: 241  FEKPSLSGRIAKWQVLLSEYDIVYVTKKATKGSALADHLAAQPVADYEPMRVDFPDENIF 300
            FEKPSLSGRIAKWQVLLSEYDIVYVTKKA KGSALADHLAAQPVADYEPM VDFPDENIF
Sbjct: 1648 FEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSALADHLAAQPVADYEPMSVDFPDENIF 1707

Query: 301  LVENDATDHETWIMLFDGASNELGHEIVVVLISPKGKVFPLTAKLCFECTYNIAEYEACI 360
            LVENDATDHETWIMLFDGASNELGH I VVLISPKGKVFPLTAKLCFECT+NIAEYEACI
Sbjct: 1708 LVENDATDHETWIMLFDGASNELGHGIGVVLISPKGKVFPLTAKLCFECTHNIAEYEACI 1767

Query: 361  MGLQTAINMSVKKLKVLGDSMLVINQVKGWLMHLPFDCLPYEHGQMKFSQNFEKISFDHV 420
            MGLQ AI+MSVKKLKVLGDSMLVI+QVK          +PY     K SQNFEKISFDHV
Sbjct: 1768 MGLQAAIDMSVKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYIAKLSQNFEKISFDHV 1827

Query: 421  HREDNRMSDALATLTVMFNLNLECELYPIQITKRDAPTYCMNM 464
            HREDNRM+DALATL VMFNLNLE ELYPIQITKRDAP YCMN+
Sbjct: 1828 HREDNRMADALATLAVMFNLNLEYELYPIQITKRDAPAYCMNI 1870

[Close]

BLAST of CSPI01G19150 vs. NCBI nr
Match: XP_031738551.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus])

HSP 1 Score: 847.8 bits (2189), Expect = 4.4e-242
Identity = 421/463 (90.93%), Postives = 429/463 (92.66%), Query Frame = 0


Query: 1    MVTLFNDMMHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSG 60
            MVTLF+DMMHKEIEVYVD+MIAKSKANEDHTTILQKLFDRLRKYQ KLNPSKCTFG TSG
Sbjct: 1752 MVTLFHDMMHKEIEVYVDDMIAKSKANEDHTTILQKLFDRLRKYQLKLNPSKCTFGATSG 1811

Query: 61   KLLGLIVSEEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 120
            KLLG IVSEEGIKVD  KVK IMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK
Sbjct: 1812 KLLGFIVSEEGIKVDPDKVKAIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 1871

Query: 121  LLRKNNPGKWNEDCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGEHDL 180
            LLRKNNPGKWNEDCEEAFNKIKQYLQSP VLIPPAPGRPLILYL VLEGSMGGVLG+HDL
Sbjct: 1872 LLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLEGSMGGVLGQHDL 1931

Query: 181  LGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI 240
             GKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI
Sbjct: 1932 SGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI 1991

Query: 241  FEKPSLSGRIAKWQVLLSEYDIVYVTKKATKGSALADHLAAQPVADYEPMRVDFPDENIF 300
            FEKPSLSGRIAKWQVLLSEYDIVYVTKKA KGSALADHLAAQPVADYEPM VDFPDENIF
Sbjct: 1992 FEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSALADHLAAQPVADYEPMSVDFPDENIF 2051

Query: 301  LVENDATDHETWIMLFDGASNELGHEIVVVLISPKGKVFPLTAKLCFECTYNIAEYEACI 360
            LVENDATDHETWIMLFDGASNELGH I VVLISPKGKVFPLTAKLCFECT+NIAEYEACI
Sbjct: 2052 LVENDATDHETWIMLFDGASNELGHGIGVVLISPKGKVFPLTAKLCFECTHNIAEYEACI 2111

Query: 361  MGLQTAINMSVKKLKVLGDSMLVINQVKGWLMHLPFDCLPYEHGQMKFSQNFEKISFDHV 420
            MGLQ AI+MSVKKLKVLGDSMLVI+QVK           PY     K SQNFEKISFDHV
Sbjct: 2112 MGLQAAIDMSVKKLKVLGDSMLVIHQVKEEWETRDAKLXPYSQYIAKLSQNFEKISFDHV 2171

Query: 421  HREDNRMSDALATLTVMFNLNLECELYPIQITKRDAPTYCMNM 464
            HREDNRM+DALATL VMFNLNLE ELYPIQITKRDAP YCMN+
Sbjct: 2172 HREDNRMADALATLAVMFNLNLEYELYPIQITKRDAPAYCMNI 2214

[Close]

BLAST of CSPI01G19150 vs. NCBI nr
Match: XP_031742240.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC116404130 [Cucumis sativus])

HSP 1 Score: 847.0 bits (2187), Expect = 7.5e-242
Identity = 420/463 (90.71%), Postives = 430/463 (92.87%), Query Frame = 0


Query: 1    MVTLFNDMMHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSG 60
            +VTLF+DMMHKEIEVYVD+MIAKSKANEDHTTILQKLFDRLRKYQ KLNPSKCTFG TSG
Sbjct: 1328 IVTLFHDMMHKEIEVYVDDMIAKSKANEDHTTILQKLFDRLRKYQLKLNPSKCTFGATSG 1387

Query: 61   KLLGLIVSEEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 120
            KLLG IVSEEGIKVD  KVK IMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK
Sbjct: 1388 KLLGFIVSEEGIKVDPDKVKAIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 1447

Query: 121  LLRKNNPGKWNEDCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGEHDL 180
            LLRKNNPGKWNEDCEEAFNKIKQYLQSP VLIPPAPGRPLILYL VLEGSMGGVLG+HDL
Sbjct: 1448 LLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLEGSMGGVLGQHDL 1507

Query: 181  LGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI 240
             GKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI
Sbjct: 1508 SGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI 1567

Query: 241  FEKPSLSGRIAKWQVLLSEYDIVYVTKKATKGSALADHLAAQPVADYEPMRVDFPDENIF 300
            FEKPSLSGRIAKWQVLLSEYDIVYVTKKA KGSALADHLAAQPVADYEPM VDFPDENIF
Sbjct: 1568 FEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSALADHLAAQPVADYEPMSVDFPDENIF 1627

Query: 301  LVENDATDHETWIMLFDGASNELGHEIVVVLISPKGKVFPLTAKLCFECTYNIAEYEACI 360
            LVENDATDHETWIMLFDGASNELGH I VVLISPKGKVFPLTAKLCFECT+NIAEYEACI
Sbjct: 1628 LVENDATDHETWIMLFDGASNELGHGIGVVLISPKGKVFPLTAKLCFECTHNIAEYEACI 1687

Query: 361  MGLQTAINMSVKKLKVLGDSMLVINQVKGWLMHLPFDCLPYEHGQMKFSQNFEKISFDHV 420
            MGLQ AI+MSVKKLKVLGDSMLVI+QVK          +PY     K SQNFEKISFDHV
Sbjct: 1688 MGLQAAIDMSVKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYIAKLSQNFEKISFDHV 1747

Query: 421  HREDNRMSDALATLTVMFNLNLECELYPIQITKRDAPTYCMNM 464
            HREDNRM+DALATL VMFNLNLE ELYPIQITKRDAP YCMN+
Sbjct: 1748 HREDNRMADALATLAVMFNLNLEYELYPIQITKRDAPAYCMNI 1790

[Close]

BLAST of CSPI01G19150 vs. NCBI nr
Match: XP_031741698.1 (uncharacterized protein LOC116403895 [Cucumis sativus])

HSP 1 Score: 845.5 bits (2183), Expect = 2.2e-241
Identity = 420/463 (90.71%), Postives = 429/463 (92.66%), Query Frame = 0


Query: 1    MVTLFNDMMHKEIEVYVDNMIAKSKANEDHTTILQKLFDRLRKYQFKLNPSKCTFGETSG 60
            MVTLF+DMMHKEIEVYVD+MIAKSKANEDHTTILQKLFDRLRKYQ KLNPSKCTFG TSG
Sbjct: 1419 MVTLFHDMMHKEIEVYVDDMIAKSKANEDHTTILQKLFDRLRKYQLKLNPSKCTFGATSG 1478

Query: 61   KLLGLIVSEEGIKVDLGKVKVIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 120
            KLLG IVSEEGIKVD  KVK IMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK
Sbjct: 1479 KLLGFIVSEEGIKVDPDKVKAIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 1538

Query: 121  LLRKNNPGKWNEDCEEAFNKIKQYLQSPHVLIPPAPGRPLILYLIVLEGSMGGVLGEHDL 180
            LLRKNNPGKWNEDCEEAFNKIKQYLQSP VLIPPAPGRPLILYL VLEGSMGGVLG+HDL
Sbjct: 1539 LLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLEGSMGGVLGQHDL 1598

Query: 181  LGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI 240
             GKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI
Sbjct: 1599 SGKKEHAIYYLSKKFTDYESKYSMLERTCCALVWTAHRLRQYMLYHTTWLISKMDPIKYI 1658

Query: 241  FEKPSLSGRIAKWQVLLSEYDIVYVTKKATKGSALADHLAAQPVADYEPMRVDFPDENIF 300
            FEKPSLSGRIAKWQVLLSEYDIVYVTKKA KGSALADHLAAQPVADYEPM VDFPDENIF
Sbjct: 1659 FEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSALADHLAAQPVADYEPMSVDFPDENIF 1718

Query: 301  LVENDATDHETWIMLFDGASNELGHEIVVVLISPKGKVFPLTAKLCFECTYNIAEYEACI 360
            LVENDATDHETWIMLFDGASNELGH I VVLISPKGKVFPLTAKLCFECT+NIAEYEACI
Sbjct: 1719 LVENDATDHETWIMLFDGASNELGHGIGVVLISPKGKVFPLTAKLCFECTHNIAEYEACI 1778

Query: 361  MGLQTAINMSVKKLKVLGDSMLVINQVKGWLMHLPFDCLPYEHGQMKFSQNFEKISFDHV 420
            MGLQ AI+MSVKKLKVLGDSMLVI+QVK          +PY     K SQNFEKISFDHV
Sbjct: 1779 MGLQAAIDMSVKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYIAKLSQNFEKISFDHV 1838

Query: 421  HREDNRMSDALATLTVMFNLNLECELYPIQITKRDAPTYCMNM 464
            HREDNRM+DALATL VMFNLNLE ELYPIQITKRDA  YCMN+
Sbjct: 1839 HREDNRMADALATLAVMFNLNLEYELYPIQITKRDASAYCMNI 1881

[Close]

BLAST of CSPI01G19150 vs. TAIR 10
Match: AT1G24090.1 (RNase H family protein )

HSP 1 Score: 53.1 bits (126), Expect = 6.8e-07
Identity = 53/148 (35.81%), Postives = 70/148 (47.30%), Query Frame = 0


Query: 295 PDENIFLVENDA-TDHETWIMLFDGAS--NELGHEIVVVLISPKGKVFPLTAKLCFECTY 354
           P E +  VE  A    ET  + FDGAS  N        VL +  G +     +     T 
Sbjct: 199 PLEKLSKVEPSAYISDETCFIEFDGASKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATN 258

Query: 355 NIAEYEACIMGLQTAINMSVKKLKVLGDSMLVINQVKG-WLMHLPFDCLPYEHGQMKFSQ 414
           N AEY A I+GL+ AI    K +KV GDS LV  Q+KG W ++   + L   H + K   
Sbjct: 259 NAAEYHALILGLKYAIEKGYKNIKVKGDSKLVCMQIKGQWKVN--HEVLAKLHKEAKLLC 318

Query: 415 NFEKISFD--HVHREDNRMSDALATLTV 437
           N + +SF+  HV R  N  +D  A L V
Sbjct: 319 N-KCVSFEISHVLRNLNADADEQANLAV 343

[Close]

BLAST of CSPI01G19150 vs. TAIR 10
Match: AT3G01410.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 3.4e-06
Identity = 30/88 (34.09%), Postives = 48/88 (54.55%), Query Frame = 0


Query: 350 TYNIAEYEACIMGLQTAINMSVKKLKVLGDSMLVINQVKG-WLMHLPFDCLPYEHGQMKF 409
           T N+AEY A ++GL++A++   K + VLGDSMLV  QV+G W  + P      +  + + 
Sbjct: 195 TNNVAEYRALLLGLRSALDKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAK-EL 254

Query: 410 SQNFEKISFDHVHREDNRMSDALATLTV 437
             +F+     H+ RE N  +D  A   +
Sbjct: 255 MNSFKTFDIKHIAREKNSEADKQANSAI 281

[Close]

BLAST of CSPI01G19150 vs. TAIR 10
Match: AT3G01410.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 3.4e-06
Identity = 30/88 (34.09%), Postives = 48/88 (54.55%), Query Frame = 0


Query: 350 TYNIAEYEACIMGLQTAINMSVKKLKVLGDSMLVINQVKG-WLMHLPFDCLPYEHGQMKF 409
           T N+AEY A ++GL++A++   K + VLGDSMLV  QV+G W  + P      +  + + 
Sbjct: 195 TNNVAEYRALLLGLRSALDKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAK-EL 254

Query: 410 SQNFEKISFDHVHREDNRMSDALATLTV 437
             +F+     H+ RE N  +D  A   +
Sbjct: 255 MNSFKTFDIKHIAREKNSEADKQANSAI 281

[Close]

BLAST of CSPI01G19150 vs. TAIR 10
Match: AT5G51080.1 (RNase H family protein )

HSP 1 Score: 47.4 bits (111), Expect = 3.7e-05
Identity = 44/133 (33.08%), Postives = 59/133 (44.36%), Query Frame = 0


Query: 307 TDHETWIMLFDGASN---ELGHEIVVVLISPKGKVFPLTAKLCFECTYNIAEYEACIMGL 366
           T +ET I+ FDGAS     L     V+       +F +   L    T N AEY   I+GL
Sbjct: 181 TSYETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGI-ATNNAAEYHGLILGL 240

Query: 367 QTAINMSVKKLKVLGDSMLVINQVKG-WLMHLPFDCLPYEHGQMK-FSQNFEKISFDHVH 426
           + AI     K+KV  DS LV  Q+KG W ++   + L   H + K  S         HV 
Sbjct: 241 KHAIEKGYTKIKVKTDSKLVCMQMKGQWKVN--HEVLSKLHKEAKQLSDKCLSFEISHVL 300

Query: 427 REDNRMSDALATL 435
           R  N  +D  A +
Sbjct: 301 RSLNSDADEQANM 310

[Close]

BLAST of CSPI01G19150 vs. TAIR 10
Match: AT5G51080.2 (RNase H family protein )

HSP 1 Score: 47.4 bits (111), Expect = 3.7e-05
Identity = 44/133 (33.08%), Postives = 59/133 (44.36%), Query Frame = 0


Query: 307 TDHETWIMLFDGASN---ELGHEIVVVLISPKGKVFPLTAKLCFECTYNIAEYEACIMGL 366
           T +ET I+ FDGAS     L     V+       +F +   L    T N AEY   I+GL
Sbjct: 181 TSYETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGI-ATNNAAEYHGLILGL 240

Query: 367 QTAINMSVKKLKVLGDSMLVINQVKG-WLMHLPFDCLPYEHGQMK-FSQNFEKISFDHVH 426
           + AI     K+KV  DS LV  Q+KG W ++   + L   H + K  S         HV 
Sbjct: 241 KHAIEKGYTKIKVKTDSKLVCMQMKGQWKVN--HEVLSKLHKEAKQLSDKCLSFEISHVL 300

Query: 427 REDNRMSDALATL 435
           R  N  +D  A +
Sbjct: 301 RSLNSDADEQANM 310

The following BLAST results are available for this feature:

BLAST of CSPI01G19150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	1.4e-28	27.68	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.2e-27	28.47	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q9UR07	8.3e-26	25.64	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT42	8.3e-26	25.64	Transposon Tf2-7 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT43	8.3e-26	25.64	Transposon Tf2-8 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CSPI01G19150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DMD2	1.1e-227	85.10	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160...	[more]
A0A5A7T7R4	2.8e-226	84.23	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G00282...	[more]
A0A5A7T0A1	3.1e-225	84.67	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00070 ...	[more]
A0A5A7TRL7	7.3e-219	82.47	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010...	[more]
A0A5D3CYI0	2.4e-193	88.42	Protein NYNRIN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G0...	[more]

BLAST of CSPI01G19150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742360.1	6.8e-243	91.14	uncharacterized protein LOC116404324 [Cucumis sativus]	[more]
XP_031737561.1	2.6e-242	90.93	LOW QUALITY PROTEIN: uncharacterized protein LOC116402452 [Cucumis sativus]	[more]
XP_031738551.1	4.4e-242	90.93	LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]	[more]
XP_031742240.1	7.5e-242	90.71	LOW QUALITY PROTEIN: uncharacterized protein LOC116404130 [Cucumis sativus]	[more]
XP_031741698.1	2.2e-241	90.71	uncharacterized protein LOC116403895 [Cucumis sativus]	[more]

BLAST of CSPI01G19150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24090.1	6.8e-07	35.81	RNase H family protein	[more]
AT3G01410.1	3.4e-06	34.09	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G01410.2	3.4e-06	34.09	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G51080.1	3.7e-05	33.08	RNase H family protein	[more]
AT5G51080.2	3.7e-05	33.08	RNase H family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 130..226 e-value: 2.6E-20 score: 72.3
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 313..443 e-value: 5.9E-22 score: 80.0
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 77..156 e-value: 1.7E-22 score: 81.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..74 e-value: 3.5E-19 score: 71.3
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 317..433 e-value: 2.4E-15 score: 56.4
IPR002156	Ribonuclease H domain	PROSITE	PS50879	RNASE_H	coord: 308..437 score: 8.952705
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 11..66 e-value: 2.8E-7 score: 30.3
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..67 score: 9.470088
None	No IPR available	PANTHER	PTHR24559:SF322	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEIN	coord: 1..449
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..449
None	No IPR available	CDD	cd09279	RNase_HI_like	coord: 312..434 e-value: 4.37096E-29 score: 108.714
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 3..263
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 310..432

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G19150.1	CSPI01G19150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003676	nucleic acid binding