CSPI01G18690 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G18690
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 14113444 .. 14113617 (-)
RNA-Seq ExpressionCSPI01G18690
SyntenyCSPI01G18690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCAAAGAGGCCACTGAAGGAGAAGAAAGAGACCCCTGTCGCCATTAAACCTCAGTGGAGTTTAGGGCCCATCTCCTCAGCGGCACAACCTACCAAGCACAAGAGTGGGTTCAAGAAGAGAGAGACTGAAAAAAGCAAACCTAAACCATTAAAGGGGATGAAGAAGTAG

mRNA sequence

ATGGGAGCAAAGAGGCCACTGAAGGAGAAGAAAGAGACCCCTGTCGCCATTAAACCTCAGTGGAGTTTAGGGCCCATCTCCTCAGCGGCACAACCTACCAAGCACAAGAGTGGGTTCAAGAAGAGAGAGACTGAAAAAAGCAAACCTAAACCATTAAAGGGGATGAAGAAGTAG

Coding sequence (CDS)

ATGGGAGCAAAGAGGCCACTGAAGGAGAAGAAAGAGACCCCTGTCGCCATTAAACCTCAGTGGAGTTTAGGGCCCATCTCCTCAGCGGCACAACCTACCAAGCACAAGAGTGGGTTCAAGAAGAGAGAGACTGAAAAAAGCAAACCTAAACCATTAAAGGGGATGAAGAAGTAG

Protein sequence

MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK*
Homology
[Close]
BLAST of CSPI01G18690 vs. ExPASy TrEMBL
Match: A0A5A7TXU3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00030 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.1e-22
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 

Query: 1  MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK 58
          MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK
Sbjct: 1  MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK 57

[Close]
BLAST of CSPI01G18690 vs. ExPASy TrEMBL
Match: A0A0A0LWE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G320330 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.1e-22
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 

Query: 1  MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK 58
          MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK
Sbjct: 1  MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK 57

[Close]
BLAST of CSPI01G18690 vs. NCBI nr
Match: KAA0046786.1 (hypothetical protein E6C27_scaffold216G00760 [Cucumis melo var. makuwa] >KGN65314.1 hypothetical protein Csa_019590 [Cucumis sativus] >TYK29661.1 hypothetical protein E5676_scaffold64G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 112.5 bits (280), Expect = 1.3e-21
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 

Query: 1  MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK 58
          MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK
Sbjct: 1  MGAKRPLKEKKETPVAIKPQWSLGPISSAAQPTKHKSGFKKRETEKSKPKPLKGMKK 57

The following BLAST results are available for this feature:
BLAST of CSPI01G18690 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G18690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TXU36.1e-22100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LWE66.1e-22100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G320330 PE=4 SV=1[more]
BLAST of CSPI01G18690 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0046786.11.3e-21100.00hypothetical protein E6C27_scaffold216G00760 [Cucumis melo var. makuwa] >KGN6531... [more]
BLAST of CSPI01G18690 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G18690.1CSPI01G18690.1mRNA