CSPI01G18660 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G18660
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	VOC domain-containing protein
Location	Chr1: 14086556 .. 14087011 (-)
RNA-Seq Expression	CSPI01G18660
Synteny	CSPI01G18660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCACAACAGAGAAGCAATTGAAAGAGATGAGAATCGAGTACGTAAAGTGTGAGGTGGAAGATGAGGGGATCTTCGTTGACCAGCTCTTCTTCCACGACCCCGATGGCCTAATGATCGAAATTTGCAACTGTGAGAACCTCCCCATCTTACCGGTGTCAGGAGGTGGTGACTCCCCTACCACGGCCACCAACGCAGCTCGTTTCTGCAGTATTCAACAAGCAGAGGAACAACAAAAGCTAAAACAAATTCAAAGCGCCACCGTTCAAAGGATGCAACTCCAGCAACTTCTCATCAACATCCCATGCAACGCCTGGACATGAAAACTAAACTATATATATTGTCTTCCTTTATTATTTTGTATGTTGTTTTACATGTTCATCAAATCATTATCATCCTGGTTACGTTTATTTAAAATGATAAAAGGGAAAATTATGAATTTGATTGCAATCAAC

mRNA sequence

ATGTCCACAACAGAGAAGCAATTGAAAGAGATGAGAATCGAGTACGTAAAGTGTGAGGTGGAAGATGAGGGGATCTTCGTTGACCAGCTCTTCTTCCACGACCCCGATGGCCTAATGATCGAAATTTGCAACTGTGAGAACCTCCCCATCTTACCGGTGTCAGGAGGTGGTGACTCCCCTACCACGGCCACCAACGCAGCTCGTTTCTGCAGTATTCAACAAGCAGAGGAACAACAAAAGCTAAAACAAATTCAAAGCGCCACCGTTCAAAGGATGCAACTCCAGCAACTTCTCATCAACATCCCATGCAACGCCTGGACATGAAAACTAAACTATATATATTGTCTTCCTTTATTATTTTGTATGTTGTTTTACATGTTCATCAAATCATTATCATCCTGGTTACGTTTATTTAAAATGATAAAAGGGAAAATTATGAATTTGATTGCAATCAAC

Coding sequence (CDS)

ATGTCCACAACAGAGAAGCAATTGAAAGAGATGAGAATCGAGTACGTAAAGTGTGAGGTGGAAGATGAGGGGATCTTCGTTGACCAGCTCTTCTTCCACGACCCCGATGGCCTAATGATCGAAATTTGCAACTGTGAGAACCTCCCCATCTTACCGGTGTCAGGAGGTGGTGACTCCCCTACCACGGCCACCAACGCAGCTCGTTTCTGCAGTATTCAACAAGCAGAGGAACAACAAAAGCTAAAACAAATTCAAAGCGCCACCGTTCAAAGGATGCAACTCCAGCAACTTCTCATCAACATCCCATGCAACGCCTGGACATGA

Protein sequence

MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSPTTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT*

Homology

[Close]

BLAST of CSPI01G18660 vs. ExPASy TrEMBL
Match: A0A0A0LZB1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G313810 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.3e-53
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP
Sbjct: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 108
           TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT
Sbjct: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 107

[Close]

BLAST of CSPI01G18660 vs. ExPASy TrEMBL
Match: A0A1S3CNC1 (metallothiol transferase FosB-like OS=Cucumis melo OX=3656 GN=LOC103502748 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.4e-48
Identity = 99/108 (91.67%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           M TTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLP++P SGGGDSP
Sbjct: 88  METTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPVVPASGGGDSP 147

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQR-MQLQQLLINIPCNAWT 108
           TT TN ARFCSIQQAEEQQKLKQIQ+ATVQR MQLQQLLINIPCNA+T
Sbjct: 148 TTPTNTARFCSIQQAEEQQKLKQIQNATVQRTMQLQQLLINIPCNAYT 195

[Close]

BLAST of CSPI01G18660 vs. ExPASy TrEMBL
Match: A0A6J1HAX4 (uncharacterized protein LOC111461685 OS=Cucurbita moschata OX=3662 GN=LOC111461685 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.7e-44
Identity = 90/107 (84.11%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           M+TTEKQLK+M+IEYVKCEVED+GIF+DQLFFHDPDGLMIEICNCENLPILPVSGGGDSP
Sbjct: 89  MATTEKQLKKMKIEYVKCEVEDDGIFIDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 148

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 108
               NAAR CSIQQAE+QQKL+QIQ+A VQ MQLQQLLI+IPCNA T
Sbjct: 149 IAVVNAARLCSIQQAEQQQKLQQIQNAAVQMMQLQQLLISIPCNACT 195

[Close]

BLAST of CSPI01G18660 vs. ExPASy TrEMBL
Match: A0A6J1JKN9 (uncharacterized protein LOC111485285 OS=Cucurbita maxima OX=3661 GN=LOC111485285 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 90/107 (84.11%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           M+TTEKQLK+M+IEYVKCEVED+GIFV+QLFFHDPDGLMIEICNCENLPILPVSGGGDSP
Sbjct: 88  MATTEKQLKKMKIEYVKCEVEDDGIFVNQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 147

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 108
               NAAR CSIQQAE+QQKL+QIQ+A VQ MQLQQLLI+IPCNA T
Sbjct: 148 IAVVNAARLCSIQQAEQQQKLQQIQNAAVQMMQLQQLLISIPCNACT 194

[Close]

BLAST of CSPI01G18660 vs. ExPASy TrEMBL
Match: A0A5A7TUK9 (Metallothiol transferase FosB-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00360 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.0e-43
Identity = 90/98 (91.84%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 11  MRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSPTTATNAARFC 70
           MRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLP++P SGGGDSPTT TN ARFC
Sbjct: 1   MRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPVVPASGGGDSPTTPTNTARFC 60

Query: 71  SIQQAEEQQKLKQIQSATVQR-MQLQQLLINIPCNAWT 108
           SIQQAEEQQKLKQIQ+ATVQR MQLQQLLINIPCNA+T
Sbjct: 61  SIQQAEEQQKLKQIQNATVQRTMQLQQLLINIPCNAYT 98

[Close]

BLAST of CSPI01G18660 vs. NCBI nr
Match: XP_004151211.1 (uncharacterized protein LOC101203188 [Cucumis sativus] >KAE8653079.1 hypothetical protein Csa_020064 [Cucumis sativus])

HSP 1 Score: 217.2 bits (552), Expect = 6.8e-53
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP
Sbjct: 88  MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 147

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 108
           TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT
Sbjct: 148 TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 194

[Close]

BLAST of CSPI01G18660 vs. NCBI nr
Match: XP_008465032.1 (PREDICTED: metallothiol transferase FosB-like [Cucumis melo])

HSP 1 Score: 199.9 bits (507), Expect = 1.1e-47
Identity = 99/108 (91.67%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           M TTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLP++P SGGGDSP
Sbjct: 88  METTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPVVPASGGGDSP 147

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQR-MQLQQLLINIPCNAWT 108
           TT TN ARFCSIQQAEEQQKLKQIQ+ATVQR MQLQQLLINIPCNA+T
Sbjct: 148 TTPTNTARFCSIQQAEEQQKLKQIQNATVQRTMQLQQLLINIPCNAYT 195

[Close]

BLAST of CSPI01G18660 vs. NCBI nr
Match: KAG6589860.1 (hypothetical protein SDJN03_15283, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023532.1 hypothetical protein SDJN02_14558, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 186.8 bits (473), Expect = 9.8e-44
Identity = 90/107 (84.11%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           M+TTEKQLK+M+IEYVKCEVED+GIF+DQLFFHDPDGLMIEICNCENLPILPVSGGGDSP
Sbjct: 89  MATTEKQLKKMKIEYVKCEVEDDGIFIDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 148

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 108
               NAAR CSIQQAE+QQKL+QIQ+A VQ MQLQQLLI+IPCNA T
Sbjct: 149 IAVVNAARLCSIQQAEQQQKLQQIQTAAVQMMQLQQLLISIPCNACT 195

[Close]

BLAST of CSPI01G18660 vs. NCBI nr
Match: XP_022961065.1 (uncharacterized protein LOC111461685 [Cucurbita moschata])

HSP 1 Score: 186.8 bits (473), Expect = 9.8e-44
Identity = 90/107 (84.11%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           M+TTEKQLK+M+IEYVKCEVED+GIF+DQLFFHDPDGLMIEICNCENLPILPVSGGGDSP
Sbjct: 89  MATTEKQLKKMKIEYVKCEVEDDGIFIDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 148

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 108
               NAAR CSIQQAE+QQKL+QIQ+A VQ MQLQQLLI+IPCNA T
Sbjct: 149 IAVVNAARLCSIQQAEQQQKLQQIQNAAVQMMQLQQLLISIPCNACT 195

[Close]

BLAST of CSPI01G18660 vs. NCBI nr
Match: XP_022987878.1 (uncharacterized protein LOC111485285 [Cucurbita maxima])

HSP 1 Score: 185.3 bits (469), Expect = 2.8e-43
Identity = 90/107 (84.11%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           M+TTEKQLK+M+IEYVKCEVED+GIFV+QLFFHDPDGLMIEICNCENLPILPVSGGGDSP
Sbjct: 88  MATTEKQLKKMKIEYVKCEVEDDGIFVNQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 147

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 108
               NAAR CSIQQAE+QQKL+QIQ+A VQ MQLQQLLI+IPCNA T
Sbjct: 148 IAVVNAARLCSIQQAEQQQKLQQIQNAAVQMMQLQQLLISIPCNACT 194

[Close]

BLAST of CSPI01G18660 vs. TAIR 10
Match: AT1G80160.1 (Lactoylglutathione lyase / glyoxalase I family protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-16
Identity = 36/55 (65.45%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSG 56
           M   EK+LKEM IEYV+  VE+ GI VDQLFFHDPD  MIEICNC++LP++P++G
Sbjct: 91  MEAVEKKLKEMEIEYVRAVVEEGGIQVDQLFFHDPDAFMIEICNCDSLPVIPLAG 145

[Close]

BLAST of CSPI01G18660 vs. TAIR 10
Match: AT1G80160.2 (Lactoylglutathione lyase / glyoxalase I family protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-16
Identity = 36/55 (65.45%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSG 56
           M   EK+LKEM IEYV+  VE+ GI VDQLFFHDPD  MIEICNC++LP++P++G
Sbjct: 65  MEAVEKKLKEMEIEYVRAVVEEGGIQVDQLFFHDPDAFMIEICNCDSLPVIPLAG 119

[Close]

BLAST of CSPI01G18660 vs. TAIR 10
Match: AT1G15380.1 (Lactoylglutathione lyase / glyoxalase I family protein )

HSP 1 Score: 80.5 bits (197), Expect = 9.2e-16
Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSG 56
           M   EK+L+EM I+YV+  VE+ GI VDQLFFHDPDG MIEICNC++LP++P+ G
Sbjct: 91  MGVVEKKLEEMGIDYVRALVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVVPLVG 145

[Close]

BLAST of CSPI01G18660 vs. TAIR 10
Match: AT1G15380.2 (Lactoylglutathione lyase / glyoxalase I family protein )

HSP 1 Score: 80.5 bits (197), Expect = 9.2e-16
Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSG 56
           M   EK+L+EM I+YV+  VE+ GI VDQLFFHDPDG MIEICNC++LP++P+ G
Sbjct: 91  MGVVEKKLEEMGIDYVRALVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVVPLVG 145

[Close]

BLAST of CSPI01G18660 vs. TAIR 10
Match: AT2G28420.1 (Lactoylglutathione lyase / glyoxalase I family protein )

HSP 1 Score: 68.2 bits (165), Expect = 4.7e-12
Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDE-GIFVDQLFFHDPDGLMIEICNCENLPILP 53
           M   EK+LKE++++Y+K  V DE    +DQLFF+DPDG M+EICNCENL ++P
Sbjct: 99  MEALEKRLKEVKVKYIKRTVGDEKDAAIDQLFFNDPDGFMVEICNCENLELVP 151

The following BLAST results are available for this feature:

BLAST of CSPI01G18660 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI01G18660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZB1	3.3e-53	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G313810 PE=4 SV=1	[more]
A0A1S3CNC1	5.4e-48	91.67	metallothiol transferase FosB-like OS=Cucumis melo OX=3656 GN=LOC103502748 PE=4 ...	[more]
A0A6J1HAX4	4.7e-44	84.11	uncharacterized protein LOC111461685 OS=Cucurbita moschata OX=3662 GN=LOC1114616...	[more]
A0A6J1JKN9	1.4e-43	84.11	uncharacterized protein LOC111485285 OS=Cucurbita maxima OX=3661 GN=LOC111485285...	[more]
A0A5A7TUK9	4.0e-43	91.84	Metallothiol transferase FosB-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of CSPI01G18660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151211.1	6.8e-53	100.00	uncharacterized protein LOC101203188 [Cucumis sativus] >KAE8653079.1 hypothetica...	[more]
XP_008465032.1	1.1e-47	91.67	PREDICTED: metallothiol transferase FosB-like [Cucumis melo]	[more]
KAG6589860.1	9.8e-44	84.11	hypothetical protein SDJN03_15283, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022961065.1	9.8e-44	84.11	uncharacterized protein LOC111461685 [Cucurbita moschata]	[more]
XP_022987878.1	2.8e-43	84.11	uncharacterized protein LOC111485285 [Cucurbita maxima]	[more]

BLAST of CSPI01G18660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80160.1	1.1e-16	65.45	Lactoylglutathione lyase / glyoxalase I family protein	[more]
AT1G80160.2	1.1e-16	65.45	Lactoylglutathione lyase / glyoxalase I family protein	[more]
AT1G15380.1	9.2e-16	63.64	Lactoylglutathione lyase / glyoxalase I family protein	[more]
AT1G15380.2	9.2e-16	63.64	Lactoylglutathione lyase / glyoxalase I family protein	[more]
AT2G28420.1	4.7e-12	56.60	Lactoylglutathione lyase / glyoxalase I family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	PANTHER	PTHR46142:SF14	LACTOYLGLUTATHIONE LYASE/GLYOXALASE I FAMILY PROTEIN	coord: 1..85
None	No IPR available	PANTHER	PTHR46142	FAMILY NOT NAMED	coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G18660.1	CSPI01G18660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016740	transferase activity