Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCTAATCTCTGCACCATTAGATGCCCGGGGACGGCCGACGCCTCCGGTGACGGTAAGCCCAAAAAACCCTAGTCTGATTTCGGAAATTATGTCCACTGCGATTCTCTCTGTTTTTCTTTTCTTTTTTTTTTTTTGAAAAAATAGGGCTCGGATTTGCAGGCCATGAAATCTGCGGGTGGAGAATGCGACATTGGTGGAGAAGAGAGAGGAACGACGTGAAGAGAGAGTTAGAGGCGTCGATTGAGAAGAAGGAATTCATGTCTCTTGAGGAGTTGCTGTTGGCTTCTCCAGGAGTGCCGTCGGAGCGAGGGTTTGGAAATGACGGAGAGTTTAATGTTTCAAGACATGGGGGATTCAAGAGAAAAGTTCATCCGGCGAGGATTCTGGAGTGTTCTTCGGCTTGTGATGAGAGATCGGGTTTTGTTGGTAAATCGGTTGCAGAGGATGAGTATTCTTCTCATGGCGGTTTTCCGATTTGTAGAAGCCAAAGTGGGAAGTTGAAGAAGAAAGTGAGTTTTAGGCTGCCGGAGGTGTCGGATGTTATTGTTATTCCCTCGCTGGAGGATGATGTGATAGCCGATGAGCGGAATGTTGATTCCTAG
mRNA sequence
ATGGGAGCTAATCTCTGCACCATTAGATGCCCGGGGACGGCCGACGCCTCCGGTGACGGGCTCGGATTTGCAGGCCATGAAATCTGCGGGTGGAGAATGCGACATTGGTGGAGAAGAGAGAGGAACGACGTGAAGAGAGAGTTAGAGGCGTCGATTGAGAAGAAGGAATTCATGTCTCTTGAGGAGTTGCTGTTGGCTTCTCCAGGAGTGCCGTCGGAGCGAGGGTTTGGAAATGACGGAGAGTTTAATGTTTCAAGACATGGGGGATTCAAGAGAAAAGTTCATCCGGCGAGGATTCTGGAGTGTTCTTCGGCTTGTGATGAGAGATCGGGTTTTGTTGGTAAATCGGTTGCAGAGGATGAGTATTCTTCTCATGGCGGTTTTCCGATTTGTAGAAGCCAAAGTGGGAAGTTGAAGAAGAAAGTGAGTTTTAGGCTGCCGGAGGTGTCGGATGTTATTGTTATTCCCTCGCTGGAGGATGATGTGATAGCCGATGAGCGGAATGTTGATTCCTAG
Coding sequence (CDS)
ATGGGAGCTAATCTCTGCACCATTAGATGCCCGGGGACGGCCGACGCCTCCGGTGACGGGCTCGGATTTGCAGGCCATGAAATCTGCGGGTGGAGAATGCGACATTGGTGGAGAAGAGAGAGGAACGACGTGAAGAGAGAGTTAGAGGCGTCGATTGAGAAGAAGGAATTCATGTCTCTTGAGGAGTTGCTGTTGGCTTCTCCAGGAGTGCCGTCGGAGCGAGGGTTTGGAAATGACGGAGAGTTTAATGTTTCAAGACATGGGGGATTCAAGAGAAAAGTTCATCCGGCGAGGATTCTGGAGTGTTCTTCGGCTTGTGATGAGAGATCGGGTTTTGTTGGTAAATCGGTTGCAGAGGATGAGTATTCTTCTCATGGCGGTTTTCCGATTTGTAGAAGCCAAAGTGGGAAGTTGAAGAAGAAAGTGAGTTTTAGGCTGCCGGAGGTGTCGGATGTTATTGTTATTCCCTCGCTGGAGGATGATGTGATAGCCGATGAGCGGAATGTTGATTCCTAG
Protein sequence
MGANLCTIRCPGTADASGDGLGFAGHEICGWRMRHWWRRERNDVKRELEASIEKKEFMSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAEDEYSSHGGFPICRSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS*
Homology
BLAST of CSPI01G16090 vs. ExPASy TrEMBL
Match:
A0A0A0LT52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G191690 PE=4 SV=1)
HSP 1 Score: 347.4 bits (890), Expect = 3.3e-92
Identity = 168/171 (98.25%), Postives = 169/171 (98.83%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDGLGFAGHEICGWRMRHWWRRERNDVKRELEASIEKKEFMSL 60
MGANLCTIRCPGTADASGDGLGFAG+EICGWR RHWWRRERNDVKRELEASIEKKEFMSL
Sbjct: 1 MGANLCTIRCPGTADASGDGLGFAGYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSL 60
Query: 61 EELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAED 120
EELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAED
Sbjct: 61 EELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAED 120
Query: 121 EYSSHGGFPICRSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 172
EYSSHGGFPIC SQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS
Sbjct: 121 EYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 171
BLAST of CSPI01G16090 vs. ExPASy TrEMBL
Match:
A0A1S3C9M5 (uncharacterized protein LOC103498217 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498217 PE=4 SV=1)
HSP 1 Score: 307.4 bits (786), Expect = 3.8e-80
Identity = 153/174 (87.93%), Postives = 159/174 (91.38%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDGLGFAGHEICGWRMRHWWRRERNDVKRELEASIEK---KEF 60
MGANLCTIR P TADASGDGLGFAG+EICGWR R WWRRERN+VKRELEASIEK KEF
Sbjct: 37 MGANLCTIRRPATADASGDGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKETKEF 96
Query: 61 MSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSV 120
MSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG+SV
Sbjct: 97 MSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESV 156
Query: 121 AEDEYSSHGGFPICRSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 172
A+DEYSSH GFPICR +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV S
Sbjct: 157 AKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 210
BLAST of CSPI01G16090 vs. ExPASy TrEMBL
Match:
A0A5A7ULA6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00430 PE=4 SV=1)
HSP 1 Score: 302.0 bits (772), Expect = 1.6e-78
Identity = 153/177 (86.44%), Postives = 159/177 (89.83%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGD---GLGFAGHEICGWRMRHWWRRERNDVKRELEASIEK--- 60
MGANLCTIR P TADASGD GLGFAG+EICGWR R WWRRERN+VKRELEASIEK
Sbjct: 1 MGANLCTIRRPATADASGDGKLGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKET 60
Query: 61 KEFMSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVG 120
KEFMSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG
Sbjct: 61 KEFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVG 120
Query: 121 KSVAEDEYSSHGGFPICRSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 172
+SVA+DEYSSH GFPICR +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV S
Sbjct: 121 ESVAKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 177
BLAST of CSPI01G16090 vs. ExPASy TrEMBL
Match:
A0A1S4E301 (uncharacterized protein LOC103498217 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498217 PE=4 SV=1)
HSP 1 Score: 302.0 bits (772), Expect = 1.6e-78
Identity = 153/177 (86.44%), Postives = 159/177 (89.83%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGD---GLGFAGHEICGWRMRHWWRRERNDVKRELEASIEK--- 60
MGANLCTIR P TADASGD GLGFAG+EICGWR R WWRRERN+VKRELEASIEK
Sbjct: 37 MGANLCTIRRPATADASGDGKLGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKET 96
Query: 61 KEFMSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVG 120
KEFMSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG
Sbjct: 97 KEFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVG 156
Query: 121 KSVAEDEYSSHGGFPICRSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 172
+SVA+DEYSSH GFPICR +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV S
Sbjct: 157 ESVAKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 213
BLAST of CSPI01G16090 vs. ExPASy TrEMBL
Match:
A0A5D3CKA0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001340 PE=4 SV=1)
HSP 1 Score: 291.2 bits (744), Expect = 2.8e-75
Identity = 148/174 (85.06%), Postives = 154/174 (88.51%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDGLGFAGHEICGWRMRHWWRRERNDVKRELEASIEK---KEF 60
MGANLCTIR P TADASGD G+EICGWR R WWRRERN+VKRELEASIEK KEF
Sbjct: 1 MGANLCTIRRPATADASGD-----GYEICGWRRRQWWRRERNEVKRELEASIEKKETKEF 60
Query: 61 MSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSV 120
MSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG+SV
Sbjct: 61 MSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESV 120
Query: 121 AEDEYSSHGGFPICRSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 172
A+DEYSSH GFPICR +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV S
Sbjct: 121 AKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 169
BLAST of CSPI01G16090 vs. NCBI nr
Match:
XP_011655111.1 (uncharacterized protein LOC105435481 [Cucumis sativus] >KAE8652878.1 hypothetical protein Csa_013027 [Cucumis sativus])
HSP 1 Score: 331.3 bits (848), Expect = 5.1e-87
Identity = 163/171 (95.32%), Postives = 164/171 (95.91%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDGLGFAGHEICGWRMRHWWRRERNDVKRELEASIEKKEFMSL 60
MGANLCTIRCPGTADASGD G+EICGWR RHWWRRERNDVKRELEASIEKKEFMSL
Sbjct: 1 MGANLCTIRCPGTADASGD-----GYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSL 60
Query: 61 EELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAED 120
EELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAED
Sbjct: 61 EELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAED 120
Query: 121 EYSSHGGFPICRSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 172
EYSSHGGFPIC SQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS
Sbjct: 121 EYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 166
BLAST of CSPI01G16090 vs. NCBI nr
Match:
XP_008458958.1 (PREDICTED: uncharacterized protein LOC103498217 isoform X2 [Cucumis melo])
HSP 1 Score: 307.4 bits (786), Expect = 7.9e-80
Identity = 153/174 (87.93%), Postives = 159/174 (91.38%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDGLGFAGHEICGWRMRHWWRRERNDVKRELEASIEK---KEF 60
MGANLCTIR P TADASGDGLGFAG+EICGWR R WWRRERN+VKRELEASIEK KEF
Sbjct: 37 MGANLCTIRRPATADASGDGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKETKEF 96
Query: 61 MSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSV 120
MSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG+SV
Sbjct: 97 MSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESV 156
Query: 121 AEDEYSSHGGFPICRSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 172
A+DEYSSH GFPICR +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV S
Sbjct: 157 AKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 210
BLAST of CSPI01G16090 vs. NCBI nr
Match:
KAA0054321.1 (uncharacterized protein E6C27_scaffold24G00430 [Cucumis melo var. makuwa])
HSP 1 Score: 302.0 bits (772), Expect = 3.3e-78
Identity = 153/177 (86.44%), Postives = 159/177 (89.83%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGD---GLGFAGHEICGWRMRHWWRRERNDVKRELEASIEK--- 60
MGANLCTIR P TADASGD GLGFAG+EICGWR R WWRRERN+VKRELEASIEK
Sbjct: 1 MGANLCTIRRPATADASGDGKLGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKET 60
Query: 61 KEFMSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVG 120
KEFMSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG
Sbjct: 61 KEFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVG 120
Query: 121 KSVAEDEYSSHGGFPICRSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 172
+SVA+DEYSSH GFPICR +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV S
Sbjct: 121 ESVAKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 177
BLAST of CSPI01G16090 vs. NCBI nr
Match:
XP_016902355.1 (PREDICTED: uncharacterized protein LOC103498217 isoform X1 [Cucumis melo])
HSP 1 Score: 302.0 bits (772), Expect = 3.3e-78
Identity = 153/177 (86.44%), Postives = 159/177 (89.83%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGD---GLGFAGHEICGWRMRHWWRRERNDVKRELEASIEK--- 60
MGANLCTIR P TADASGD GLGFAG+EICGWR R WWRRERN+VKRELEASIEK
Sbjct: 37 MGANLCTIRRPATADASGDGKLGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKET 96
Query: 61 KEFMSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVG 120
KEFMSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG
Sbjct: 97 KEFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVG 156
Query: 121 KSVAEDEYSSHGGFPICRSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 172
+SVA+DEYSSH GFPICR +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV S
Sbjct: 157 ESVAKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 213
BLAST of CSPI01G16090 vs. NCBI nr
Match:
XP_008458959.1 (PREDICTED: uncharacterized protein LOC103498217 isoform X3 [Cucumis melo])
HSP 1 Score: 291.2 bits (744), Expect = 5.9e-75
Identity = 148/174 (85.06%), Postives = 154/174 (88.51%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDGLGFAGHEICGWRMRHWWRRERNDVKRELEASIEK---KEF 60
MGANLCTIR P TADASGD G+EICGWR R WWRRERN+VKRELEASIEK KEF
Sbjct: 37 MGANLCTIRRPATADASGD-----GYEICGWRRRQWWRRERNEVKRELEASIEKKETKEF 96
Query: 61 MSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSV 120
MSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG+SV
Sbjct: 97 MSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESV 156
Query: 121 AEDEYSSHGGFPICRSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 172
A+DEYSSH GFPICR +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV S
Sbjct: 157 AKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 205
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LT52 | 3.3e-92 | 98.25 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G191690 PE=4 SV=1 | [more] |
| A0A1S3C9M5 | 3.8e-80 | 87.93 | uncharacterized protein LOC103498217 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
| A0A5A7ULA6 | 1.6e-78 | 86.44 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A1S4E301 | 1.6e-78 | 86.44 | uncharacterized protein LOC103498217 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
| A0A5D3CKA0 | 2.8e-75 | 85.06 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_011655111.1 | 5.1e-87 | 95.32 | uncharacterized protein LOC105435481 [Cucumis sativus] >KAE8652878.1 hypothetica... | [more] |
| XP_008458958.1 | 7.9e-80 | 87.93 | PREDICTED: uncharacterized protein LOC103498217 isoform X2 [Cucumis melo] | [more] |
| KAA0054321.1 | 3.3e-78 | 86.44 | uncharacterized protein E6C27_scaffold24G00430 [Cucumis melo var. makuwa] | [more] |
| XP_016902355.1 | 3.3e-78 | 86.44 | PREDICTED: uncharacterized protein LOC103498217 isoform X1 [Cucumis melo] | [more] |
| XP_008458959.1 | 5.9e-75 | 85.06 | PREDICTED: uncharacterized protein LOC103498217 isoform X3 [Cucumis melo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
