CSPI01G15670 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G15670
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	agamous-like MADS-box protein AGL62
Location	Chr1: 11221249 .. 11221910 (+)
RNA-Seq Expression	CSPI01G15670
Synteny	CSPI01G15670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAGTTTTAACGGTCGACTCTTTCTCTAAAACCCTCTTTCACTTTCTTGACGATGAAGAAGTCTTCAGGGCGTCGAAAGATTGAGATCAAAAGGCTTGACAAGAACACTACACGCCAGGTTACTTTCTCAAAACGTCGCGTCGGACTTTTCAACAAGGCAGCCGAGCTTTCCCTTCTCTGCGGCGCTGAGATCGCCATCCTCCTCTTCTCCTCCCGCGGAAAAGTCTATACATTCGGCCATCCCAACGTCGACGCTCTCCTCGACCGCTTTCTCACTGGAAACTTTCTTCCGCCCAAGCCGGCGGAGGCGTATCTCCCTCTCCCGGAGTTGAATCTTGATCTCTGCAAAGCGGAAGCCGAATTTGAAATCGAGAAGAAGCGCGCGGTGGAGAGATTGAGGAATAGCGACCGATTTTGGTGGGATGAGGCGCTGGAACGTATGAGAATGGATGAGTTGAAGTCATTCCGTTCTTCACTGCTCCAACTGAGAGCAAATGTGGCGGGGAGATTGGAGAAAATTCGGGCGATGAGAATGGAAGATCCTCCGGTAACTCCATCGTGGTCGATCGTTCTTGGTGGAGAAAATCAATGTGCGGCGTCGTTTCACGTGGGTGAAAATCAATCGTTTGCGATGGATTGGGAAGAGGAGATTTGGGGTTAG

mRNA sequence

TGAAGTTTTAACGGTCGACTCTTTCTCTAAAACCCTCTTTCACTTTCTTGACGATGAAGAAGTCTTCAGGGCGTCGAAAGATTGAGATCAAAAGGCTTGACAAGAACACTACACGCCAGGTTACTTTCTCAAAACGTCGCGTCGGACTTTTCAACAAGGCAGCCGAGCTTTCCCTTCTCTGCGGCGCTGAGATCGCCATCCTCCTCTTCTCCTCCCGCGGAAAAGTCTATACATTCGGCCATCCCAACGTCGACGCTCTCCTCGACCGCTTTCTCACTGGAAACTTTCTTCCGCCCAAGCCGGCGGAGGCGTATCTCCCTCTCCCGGAGTTGAATCTTGATCTCTGCAAAGCGGAAGCCGAATTTGAAATCGAGAAGAAGCGCGCGGTGGAGAGATTGAGGAATAGCGACCGATTTTGGTGGGATGAGGCGCTGGAACGTATGAGAATGGATGAGTTGAAGTCATTCCGTTCTTCACTGCTCCAACTGAGAGCAAATGTGGCGGGGAGATTGGAGAAAATTCGGGCGATGAGAATGGAAGATCCTCCGGTAACTCCATCGTGGTCGATCGTTCTTGGTGGAGAAAATCAATGTGCGGCGTCGTTTCACGTGGGTGAAAATCAATCGTTTGCGATGGATTGGGAAGAGGAGATTTGGGGTTAG

Coding sequence (CDS)

ATGAAGAAGTCTTCAGGGCGTCGAAAGATTGAGATCAAAAGGCTTGACAAGAACACTACACGCCAGGTTACTTTCTCAAAACGTCGCGTCGGACTTTTCAACAAGGCAGCCGAGCTTTCCCTTCTCTGCGGCGCTGAGATCGCCATCCTCCTCTTCTCCTCCCGCGGAAAAGTCTATACATTCGGCCATCCCAACGTCGACGCTCTCCTCGACCGCTTTCTCACTGGAAACTTTCTTCCGCCCAAGCCGGCGGAGGCGTATCTCCCTCTCCCGGAGTTGAATCTTGATCTCTGCAAAGCGGAAGCCGAATTTGAAATCGAGAAGAAGCGCGCGGTGGAGAGATTGAGGAATAGCGACCGATTTTGGTGGGATGAGGCGCTGGAACGTATGAGAATGGATGAGTTGAAGTCATTCCGTTCTTCACTGCTCCAACTGAGAGCAAATGTGGCGGGGAGATTGGAGAAAATTCGGGCGATGAGAATGGAAGATCCTCCGGTAACTCCATCGTGGTCGATCGTTCTTGGTGGAGAAAATCAATGTGCGGCGTCGTTTCACGTGGGTGAAAATCAATCGTTTGCGATGGATTGGGAAGAGGAGATTTGGGGTTAG

Protein sequence

MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTFGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSDRFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQCAASFHVGENQSFAMDWEEEIWG*

Homology

[Close]

BLAST of CSPI01G15670 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.2e-25
Identity = 63/159 (39.62%), Postives = 101/159 (63.52%), Query Frame = 0


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           +KKS GR+KIE+ ++   +  QVTFSKRR GLF KA+EL  LCGAE+AI++FS   KV++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDALLDRFLTGNFLPP--------KPAEAYLPLPELNLDLCKAEAEFEIEKKR-- 120
           FGHPNVD+++DRF+  N LPP        +       + +LN  L +  ++ E EKK+  
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 AVERLRNSDRF---WWDEALERMRMDELKSFRSSLLQLR 147
            ++++R   +    WW++ +E + + +L+ F+ +L  L+
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLK 160

[Close]

BLAST of CSPI01G15670 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.7e-23
Identity = 65/159 (40.88%), Postives = 98/159 (61.64%), Query Frame = 0


Query: 2   KKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTF 61
           K+S GR+KI + ++ K + RQVTFSKRR GLF KA+EL  LCGAEI I++FS   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDALLDRFLTGNFLPPKPAEAYLPLP----ELNLDLCKAEAEFEIEKKRA------ 121
           GHP+V+++LDR+++ N +    ++     P    ELN+ L    +E E EKK+       
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 -VERLRNSDRFWWDEALERMRMDELKSFRSSLLQLRANV 150
             E +R S   WW++ +E M M +L+  + +L +LR  V
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of CSPI01G15670 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.9e-19
Identity = 58/167 (34.73%), Postives = 97/167 (58.08%), Query Frame = 0


Query: 6   GRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTFGHPN 65
           GRRKI+++ +    TRQVTFSKRR GLF KA+EL+ LC AE+ I++FS  GK +++G PN
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 66  VDALLDRFL-------------TGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEK-KRA 125
           +D++ +RF+             +GN+ P       L      LDL   E E E E+ +++
Sbjct: 62  LDSVAERFMREYDDSDSGDEEKSGNYRPK------LKRLSERLDLLNQEVEAEKERGEKS 121

Query: 126 VERLRNSDRFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRA 159
            E+L ++    + E++E + +DEL  ++  L  +   + G++  ++A
Sbjct: 122 QEKLESAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQA 162

[Close]

BLAST of CSPI01G15670 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.6e-19
Identity = 56/135 (41.48%), Postives = 80/135 (59.26%), Query Frame = 0


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           +KK+ GRRK+EI ++ K +  QVTFSKR+ GLF KA+E   LC A+IA+++FS  GKV++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDALLDRF----LTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLR 120
           FGHPNVD LLD F    +  N      +   L +  LN    + +AE E E+K    R +
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 N-----SDRFWWDEA 127
           N     +   WW ++
Sbjct: 122 NERENENAEEWWSKS 136

[Close]

BLAST of CSPI01G15670 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-18
Identity = 62/164 (37.80%), Postives = 90/164 (54.88%), Query Frame = 0


Query: 2   KKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTF 61
           +K+ GRRKIE+ ++   +  QVTFSKRR GLF K +EL  LC AEIAI++FS  GK Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVDALLD----RFLTGNFLPPKPAEAYLPLPELNLDLCK--AEAEFEIEKKRAV--- 121
           GHPNV+ LLD    R +  N      +   L +  LN  L +  AE E E E K+++   
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122

Query: 122 ERLRNSDRFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKI 157
           ER       WW  +   + + +  S +  L  L+  V  ++ ++
Sbjct: 123 ERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

[Close]

BLAST of CSPI01G15670 vs. ExPASy TrEMBL
Match: A0A0A0LW53 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G181400 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 6.1e-109
Identity = 201/202 (99.50%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSDR 120
           FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNS+R
Sbjct: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSER 120

Query: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC 180
           FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC
Sbjct: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC 180

Query: 181 AASFHVGENQSFAMDWEEEIWG 203
           AASFHVGENQSFAMDWEEEIWG
Sbjct: 181 AASFHVGENQSFAMDWEEEIWG 202

[Close]

BLAST of CSPI01G15670 vs. ExPASy TrEMBL
Match: A0A5D3CLQ1 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001380 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.8e-74
Identity = 148/212 (69.81%), Postives = 168/212 (79.25%), Query Frame = 0


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKKS GRRKIEIK+LDK +T+QVTFSKRR GLFNKAAELS+LCGAEIA+L+FSSRGK+YT
Sbjct: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60

Query: 61  FGHPNVDALLDRFLTG-NFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSD 120
           FGHPNVDALLDRFLTG N +PPKPAEAYLP+ ELN DL KAEAEFEIEK+RA ER RNS+
Sbjct: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120

Query: 121 RFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSI------- 180
           RFWWDE LE M++DELK FRSSL++LRANV  RLEKI       P +  + SI       
Sbjct: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS 180

Query: 181 --VLGGENQCAASFHVGENQSFAMDWEEEIWG 203
             +  G N C  SFH+ EN+S AMDWE EIWG
Sbjct: 181 IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG 212

[Close]

BLAST of CSPI01G15670 vs. ExPASy TrEMBL
Match: A0A1S3CAA4 (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103498214 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.8e-74
Identity = 148/212 (69.81%), Postives = 168/212 (79.25%), Query Frame = 0


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKKS GRRKIEIK+LDK +T+QVTFSKRR GLFNKAAELS+LCGAEIA+L+FSSRGK+YT
Sbjct: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60

Query: 61  FGHPNVDALLDRFLTG-NFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSD 120
           FGHPNVDALLDRFLTG N +PPKPAEAYLP+ ELN DL KAEAEFEIEK+RA ER RNS+
Sbjct: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120

Query: 121 RFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSI------- 180
           RFWWDE LE M++DELK FRSSL++LRANV  RLEKI       P +  + SI       
Sbjct: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS 180

Query: 181 --VLGGENQCAASFHVGENQSFAMDWEEEIWG 203
             +  G N C  SFH+ EN+S AMDWE EIWG
Sbjct: 181 IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG 212

[Close]

BLAST of CSPI01G15670 vs. ExPASy TrEMBL
Match: A0A6J1JGY4 (agamous-like MADS-box protein AGL61 OS=Cucurbita maxima OX=3661 GN=LOC111484282 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 4.6e-56
Identity = 117/166 (70.48%), Postives = 136/166 (81.93%), Query Frame = 0


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKKS GRRKIEIK+L+K +++QVTFSKRR GLFNKAAELS+LCGAEIAIL+ S+  K+YT
Sbjct: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSASNKLYT 60

Query: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSDR 120
           FGHPNV++LLDRFL GN  PPKPAEAYLPL ELN D     AEF+IEK+RA ERL N DR
Sbjct: 61  FGHPNVESLLDRFLAGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERLSN-DR 120

Query: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPV 167
           FWWDE LE M++DELK FRSSL++LR  VA R+EK  AMR E  P+
Sbjct: 121 FWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTAMRKEGSPI 165

[Close]

BLAST of CSPI01G15670 vs. ExPASy TrEMBL
Match: A0A6J1FUA9 (agamous-like MADS-box protein AGL61 OS=Cucurbita moschata OX=3662 GN=LOC111448852 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 4.6e-56
Identity = 117/166 (70.48%), Postives = 136/166 (81.93%), Query Frame = 0


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKKS GRRKIEIK+L+K +++QVTFSKRR GLFNKAAELS+LCGAEIAIL+ SSR K+YT
Sbjct: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVASSRNKLYT 60

Query: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSDR 120
           FGHPNV++LLDRFLTGN  PPKPAEAYLPL ELN D     AE++IEK+R  ERL N DR
Sbjct: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDIEKRRTAERLSN-DR 120

Query: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPV 167
           FWWDE LE M++D+LK FRSSL+ LR  VA R+EK  AMR E  P+
Sbjct: 121 FWWDEPLESMKIDDLKRFRSSLVDLRGKVAERVEKFTAMRKEGSPL 165

[Close]

BLAST of CSPI01G15670 vs. NCBI nr
Match: XP_004139610.1 (agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 403.3 bits (1035), Expect = 1.2e-108
Identity = 201/202 (99.50%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSDR 120
           FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNS+R
Sbjct: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSER 120

Query: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC 180
           FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC
Sbjct: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC 180

Query: 181 AASFHVGENQSFAMDWEEEIWG 203
           AASFHVGENQSFAMDWEEEIWG
Sbjct: 181 AASFHVGENQSFAMDWEEEIWG 202

[Close]

BLAST of CSPI01G15670 vs. NCBI nr
Match: KGN65064.2 (hypothetical protein Csa_022797 [Cucumis sativus])

HSP 1 Score: 400.2 bits (1027), Expect = 1.1e-107
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 3   KSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTFG 62
           KSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTFG
Sbjct: 443 KSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTFG 502

Query: 63  HPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSDRFW 122
           HPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNS+RFW
Sbjct: 503 HPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSERFW 562

Query: 123 WDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQCAA 182
           WDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQCAA
Sbjct: 563 WDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQCAA 622

Query: 183 SFHVGENQSFAMDWEEEIWG 203
           SFHVGENQSFAMDWEEEIWG
Sbjct: 623 SFHVGENQSFAMDWEEEIWG 642

[Close]

BLAST of CSPI01G15670 vs. NCBI nr
Match: KAE8637358.1 (hypothetical protein CSA_011908 [Cucumis sativus])

HSP 1 Score: 367.1 bits (941), Expect = 9.9e-98
Identity = 185/186 (99.46%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSDR 120
           FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNS+R
Sbjct: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSER 120

Query: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC 180
           FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC
Sbjct: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC 180

Query: 181 AASFHV 187
           AASFHV
Sbjct: 181 AASFHV 186

[Close]

BLAST of CSPI01G15670 vs. NCBI nr
Match: XP_031745942.1 (agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 367.1 bits (941), Expect = 9.9e-98
Identity = 185/186 (99.46%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSDR 120
           FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNS+R
Sbjct: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSER 120

Query: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC 180
           FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC
Sbjct: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGGENQC 180

Query: 181 AASFHV 187
           AASFHV
Sbjct: 181 AASFHV 186

[Close]

BLAST of CSPI01G15670 vs. NCBI nr
Match: XP_008458954.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0054324.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa] >TYK12360.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa])

HSP 1 Score: 287.3 bits (734), Expect = 1.0e-73
Identity = 148/212 (69.81%), Postives = 168/212 (79.25%), Query Frame = 0


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           MKKS GRRKIEIK+LDK +T+QVTFSKRR GLFNKAAELS+LCGAEIA+L+FSSRGK+YT
Sbjct: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60

Query: 61  FGHPNVDALLDRFLTG-NFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSD 120
           FGHPNVDALLDRFLTG N +PPKPAEAYLP+ ELN DL KAEAEFEIEK+RA ER RNS+
Sbjct: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120

Query: 121 RFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSI------- 180
           RFWWDE LE M++DELK FRSSL++LRANV  RLEKI       P +  + SI       
Sbjct: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS 180

Query: 181 --VLGGENQCAASFHVGENQSFAMDWEEEIWG 203
             +  G N C  SFH+ EN+S AMDWE EIWG
Sbjct: 181 IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG 212

[Close]

BLAST of CSPI01G15670 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 115.9 bits (289), Expect = 3.7e-26
Identity = 63/159 (39.62%), Postives = 101/159 (63.52%), Query Frame = 0


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           +KKS GR+KIE+ ++   +  QVTFSKRR GLF KA+EL  LCGAE+AI++FS   KV++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDALLDRFLTGNFLPP--------KPAEAYLPLPELNLDLCKAEAEFEIEKKR-- 120
           FGHPNVD+++DRF+  N LPP        +       + +LN  L +  ++ E EKK+  
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 AVERLRNSDRF---WWDEALERMRMDELKSFRSSLLQLR 147
            ++++R   +    WW++ +E + + +L+ F+ +L  L+
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLK 160

[Close]

BLAST of CSPI01G15670 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 109.8 bits (273), Expect = 2.7e-24
Identity = 65/159 (40.88%), Postives = 98/159 (61.64%), Query Frame = 0


Query: 2   KKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTF 61
           K+S GR+KI + ++ K + RQVTFSKRR GLF KA+EL  LCGAEI I++FS   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDALLDRFLTGNFLPPKPAEAYLPLP----ELNLDLCKAEAEFEIEKKRA------ 121
           GHP+V+++LDR+++ N +    ++     P    ELN+ L    +E E EKK+       
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 -VERLRNSDRFWWDEALERMRMDELKSFRSSLLQLRANV 150
             E +R S   WW++ +E M M +L+  + +L +LR  V
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of CSPI01G15670 vs. TAIR 10
Match: AT1G17310.1 (MADS-box transcription factor family protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-20
Identity = 63/175 (36.00%), Postives = 98/175 (56.00%), Query Frame = 0


Query: 2   KKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTF 61
           K + GR+KIEIK++++ T RQVTFSKRR GLF K+AELS+L GA+IA++ FS   ++Y F
Sbjct: 44  KTTRGRQKIEIKKIEEETKRQVTFSKRRRGLFKKSAELSVLTGAKIAVITFSKCDRIYRF 103

Query: 62  GHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSDRF 121
           GH  VDAL+D++L  +   P   E Y             +   + E +R           
Sbjct: 104 GH--VDALIDKYLRKS---PVKLEGY-----------SGDNAADEESRRP---------- 163

Query: 122 WWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSIVLGG 177
           WW+  +E +  +EL+ + ++L  LR N+  ++  +   R  D  + P+W I + G
Sbjct: 164 WWERPVESVPEEELEEYMAALSMLRENIGKKIVAMGNDRTVD--MVPAWPINVMG 190

[Close]

BLAST of CSPI01G15670 vs. TAIR 10
Match: AT2G34440.1 (AGAMOUS-like 29 )

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-20
Identity = 58/167 (34.73%), Postives = 97/167 (58.08%), Query Frame = 0


Query: 6   GRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTFGHPN 65
           GRRKI+++ +    TRQVTFSKRR GLF KA+EL+ LC AE+ I++FS  GK +++G PN
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 66  VDALLDRFL-------------TGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEK-KRA 125
           +D++ +RF+             +GN+ P       L      LDL   E E E E+ +++
Sbjct: 62  LDSVAERFMREYDDSDSGDEEKSGNYRPK------LKRLSERLDLLNQEVEAEKERGEKS 121

Query: 126 VERLRNSDRFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRA 159
            E+L ++    + E++E + +DEL  ++  L  +   + G++  ++A
Sbjct: 122 QEKLESAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQA 162

[Close]

BLAST of CSPI01G15670 vs. TAIR 10
Match: AT1G65360.1 (AGAMOUS-like 23 )

HSP 1 Score: 95.9 bits (237), Expect = 4.0e-20
Identity = 56/135 (41.48%), Postives = 80/135 (59.26%), Query Frame = 0


Query: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60
           +KK+ GRRK+EI ++ K +  QVTFSKR+ GLF KA+E   LC A+IA+++FS  GKV++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDALLDRF----LTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLR 120
           FGHPNVD LLD F    +  N      +   L +  LN    + +AE E E+K    R +
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 N-----SDRFWWDEA 127
           N     +   WW ++
Sbjct: 122 NERENENAEEWWSKS 136

The following BLAST results are available for this feature:

BLAST of CSPI01G15670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	5.2e-25	39.62	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	3.7e-23	40.88	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
O64703	1.9e-19	34.73	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]
O80807	5.6e-19	41.48	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
Q9LMM8	2.1e-18	37.80	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]

BLAST of CSPI01G15670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW53	6.1e-109	99.50	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G181400 PE...	[more]
A0A5D3CLQ1	4.8e-74	69.81	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CAA4	4.8e-74	69.81	agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103498214 PE=4...	[more]
A0A6J1JGY4	4.6e-56	70.48	agamous-like MADS-box protein AGL61 OS=Cucurbita maxima OX=3661 GN=LOC111484282 ...	[more]
A0A6J1FUA9	4.6e-56	70.48	agamous-like MADS-box protein AGL61 OS=Cucurbita moschata OX=3662 GN=LOC11144885...	[more]

BLAST of CSPI01G15670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139610.1	1.2e-108	99.50	agamous-like MADS-box protein AGL62 [Cucumis sativus]	[more]
KGN65064.2	1.1e-107	99.50	hypothetical protein Csa_022797 [Cucumis sativus]	[more]
KAE8637358.1	9.9e-98	99.46	hypothetical protein CSA_011908 [Cucumis sativus]	[more]
XP_031745942.1	9.9e-98	99.46	agamous-like MADS-box protein AGL62 [Cucumis sativus]	[more]
XP_008458954.1	1.0e-73	69.81	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0054324.1 agam...	[more]

BLAST of CSPI01G15670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	3.7e-26	39.62	AGAMOUS-like 62	[more]
AT2G24840.1	2.7e-24	40.88	AGAMOUS-like 61	[more]
AT1G17310.1	1.4e-20	36.00	MADS-box transcription factor family protein	[more]
AT2G34440.1	1.4e-20	34.73	AGAMOUS-like 29	[more]
AT1G65360.1	4.0e-20	41.48	AGAMOUS-like 23	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 7..27 score: 56.16 coord: 42..63 score: 44.08 coord: 27..42 score: 65.05
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 5..64 e-value: 8.0E-31 score: 118.4
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 17..61 e-value: 1.3E-20 score: 72.7
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 5..65 score: 27.151146
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 18..80 e-value: 3.7E-25 score: 89.6
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 6..75
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 5..157
None	No IPR available	PANTHER	PTHR11945:SF630	AGAMOUS-LIKE 83-RELATED	coord: 5..157
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 6..77 e-value: 3.76729E-35 score: 116.883

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G15670.1	CSPI01G15670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006508	proteolysis
cellular_component	GO:0072546	EMC complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding