CSPI01G15560 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G15560
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 11145759 .. 11146004 (-)
RNA-Seq ExpressionCSPI01G15560
SyntenyCSPI01G15560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCGAAAGCCTAGGCGAAGTGGTTCGGAGTCGTGCTCACAATGCAAGTCAGGTTGCCGATTGAACGTAGAGCGTCGTCGACTACAGAGCTGGGCGTTTGCGTGGGTGTGGGCTCCAGTCGTCGCTTGCCTTACGCCTGTAGTGCCGGAGTGTCGCCGGAGAAGTAGACTGAGGTATGGGGTTCGGGCGCTGTTTGATGAGAGGGGTGGAAGATGGACGTTTCCTTTTTTTCCCAAATCTTAA

mRNA sequence

ATGCTTCGAAAGCCTAGGCGAAGTGGTTCGGAGTCGTGCTCACAATGCAAGTCAGGTTGCCGATTGAACGTAGAGCGTCGTCGACTACAGAGCTGGGCGTTTGCGTGGGTGTGGGCTCCAGTCGTCGCTTGCCTTACGCCTGTAGTGCCGGAGTGTCGCCGGAGAAGTAGACTGAGGTATGGGGTTCGGGCGCTGTTTGATGAGAGGGGTGGAAGATGGACGTTTCCTTTTTTTCCCAAATCTTAA

Coding sequence (CDS)

ATGCTTCGAAAGCCTAGGCGAAGTGGTTCGGAGTCGTGCTCACAATGCAAGTCAGGTTGCCGATTGAACGTAGAGCGTCGTCGACTACAGAGCTGGGCGTTTGCGTGGGTGTGGGCTCCAGTCGTCGCTTGCCTTACGCCTGTAGTGCCGGAGTGTCGCCGGAGAAGTAGACTGAGGTATGGGGTTCGGGCGCTGTTTGATGAGAGGGGTGGAAGATGGACGTTTCCTTTTTTTCCCAAATCTTAA

Protein sequence

MLRKPRRSGSESCSQCKSGCRLNVERRRLQSWAFAWVWAPVVACLTPVVPECRRRSRLRYGVRALFDERGGRWTFPFFPKS*
Homology
[Close]
BLAST of CSPI01G15560 vs. ExPASy TrEMBL
Match: A0A0A0LT13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181290 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 9.8e-42
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1   MLRKPRRSGSESCSQCKSGCRLNVERRRLQSWAFAWVWAPVVACLTPVVPECRRRSRLRY 60
           MLRKPRRSGSESCSQCKSGCRLNVERRRLQSWAFAWVWAPVVACLTPVVPECRRRSRLRY
Sbjct: 87  MLRKPRRSGSESCSQCKSGCRLNVERRRLQSWAFAWVWAPVVACLTPVVPECRRRSRLRY 146

Query: 61  GVRALFDERGGRWTFPFFPKS 82
           GVRALFDERGGRWTFPFFPKS
Sbjct: 147 GVRALFDERGGRWTFPFFPKS 167

[Close]
BLAST of CSPI01G15560 vs. NCBI nr
Match: KGN65015.1 (hypothetical protein Csa_022890 [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 2.0e-41
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1   MLRKPRRSGSESCSQCKSGCRLNVERRRLQSWAFAWVWAPVVACLTPVVPECRRRSRLRY 60
           MLRKPRRSGSESCSQCKSGCRLNVERRRLQSWAFAWVWAPVVACLTPVVPECRRRSRLRY
Sbjct: 87  MLRKPRRSGSESCSQCKSGCRLNVERRRLQSWAFAWVWAPVVACLTPVVPECRRRSRLRY 146

Query: 61  GVRALFDERGGRWTFPFFPKS 82
           GVRALFDERGGRWTFPFFPKS
Sbjct: 147 GVRALFDERGGRWTFPFFPKS 167

The following BLAST results are available for this feature:
BLAST of CSPI01G15560 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G15560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT139.8e-42100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181290 PE=4 SV=1[more]
BLAST of CSPI01G15560 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65015.12.0e-41100.00hypothetical protein Csa_022890 [Cucumis sativus][more]
BLAST of CSPI01G15560 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G15560.1CSPI01G15560.1mRNA