CSPI01G13770 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G13770
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Stress response protein NST1-like
Location	Chr1: 9347379 .. 9348200 (+)
RNA-Seq Expression	CSPI01G13770
Synteny	CSPI01G13770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGTGACAAAAAGAGAAAAAGACAAGGCACACAGGGAGGATGAACGTCTTCGCCAATTATCTGCAAAGAAAAAGCAAAGTATCACCTTCCTAGAAGGAGCGAAGAGTAAGTTAGCGGAGATGCAAGCCACTGAGAAGAGAAAACTTGATACCCTCGCAGACTTAAGCGAGCAGGTAAACAGGGTGGCCGCCGCGAATGAAGCGATGAAAAAACAGGAAATTGACCACATGATATTGTGGCTGAAGAACTGACACAGGAAATTGAAAGAATGAGTTGTACGGAATCATTAATGCAAACTGAAGAACTCGAGCTTCTAAGCAGCAAATATCCTCAGAAAGGAAAAGGCCAAGGTAGGGACATCCATACCTAAGGATGATAGAAAAAGGGAAAATGATGGATACCCAAGATCTAGAAAGAATCATAAAGATTGAAAATTGCTATCTTTTAATGGGCTATTACCCGACTTTCTCTGCTGTCCAATCAAGGCGCTCTAATGAGAGAAGTTTTTTATAGGTGAAACAAAGATAAGGTTGGATCTGGTCGAGATATTTTATGCAGCAAATTTCCACCCTCAGGAATCATATGTCGTAGTGGAAGGAGAGAAAGTCTCATTCACTTTGGAAGAGATTAATGAGTTGTACGACCTACTTAATGACCCTGAAGCATACTCCGACCAGAGCATTATTGATAGCCCAATGCGGAGAGATGCGAAAAAGGTTAACCAATTAATCGCAAGGCTAAGGGCTAAGTGGACAAAAACACCAATTGAAAGACTTCAACAGTTCCCACACCAGTTGACAACCAAGGCAAAAGTCTGA

mRNA sequence

ATGATGGTGACAAAAAGAGAAAAAGACAAGGCACACAGGGAGGATGAACGTCTTCGCCAATTATCTGCAAAGAAAAAGCAAAGTATCACCTTCCTAGAAGGAGCGAAGAGTAAGTTAGCGGAGATGCAAGCCACTGAGAAGAGAAAACTTGATACCCTCGCAGACTTAAGCGAGCAGGAAATTGAAAGAATGAGTTGTACGGAATCATTAATGCAAACTGAAGAACTCGAGCTTCTAAGCAGCAAATATCCTCAGAAAGGAAAAGGCCAAGCAAATTTCCACCCTCAGGAATCATATGTCGTAGTGGAAGGAGAGAAAGTCTCATTCACTTTGGAAGAGATTAATGAGTTGTACGACCTACTTAATGACCCTGAAGCATACTCCGACCAGAGCATTATTGATAGCCCAATGCGGAGAGATGCGAAAAAGGTTAACCAATTAATCGCAAGGCTAAGGGCTAAGTGGACAAAAACACCAATTGAAAGACTTCAACAGTTCCCACACCAGTTGACAACCAAGGCAAAAGTCTGA

Coding sequence (CDS)

ATGATGGTGACAAAAAGAGAAAAAGACAAGGCACACAGGGAGGATGAACGTCTTCGCCAATTATCTGCAAAGAAAAAGCAAAGTATCACCTTCCTAGAAGGAGCGAAGAGTAAGTTAGCGGAGATGCAAGCCACTGAGAAGAGAAAACTTGATACCCTCGCAGACTTAAGCGAGCAGGAAATTGAAAGAATGAGTTGTACGGAATCATTAATGCAAACTGAAGAACTCGAGCTTCTAAGCAGCAAATATCCTCAGAAAGGAAAAGGCCAAGCAAATTTCCACCCTCAGGAATCATATGTCGTAGTGGAAGGAGAGAAAGTCTCATTCACTTTGGAAGAGATTAATGAGTTGTACGACCTACTTAATGACCCTGAAGCATACTCCGACCAGAGCATTATTGATAGCCCAATGCGGAGAGATGCGAAAAAGGTTAACCAATTAATCGCAAGGCTAAGGGCTAAGTGGACAAAAACACCAATTGAAAGACTTCAACAGTTCCCACACCAGTTGACAACCAAGGCAAAAGTCTGA

Protein sequence

MMVTKREKDKAHREDERLRQLSAKKKQSITFLEGAKSKLAEMQATEKRKLDTLADLSEQEIERMSCTESLMQTEELELLSSKYPQKGKGQANFHPQESYVVVEGEKVSFTLEEINELYDLLNDPEAYSDQSIIDSPMRRDAKKVNQLIARLRAKWTKTPIERLQQFPHQLTTKAKV*

Homology

[Close]

BLAST of CSPI01G13770 vs. ExPASy TrEMBL
Match: A0A5D3DES7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00570 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.6e-17
Identity = 49/86 (56.98%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 91  ANFHPQESYVVVEGEKVSFTLEEINELYDLLNDPEAYSDQSIIDSPMRRDAKKVNQLIAR 150
           A +H  ESYV+VE +KVSFT+EEINELY LLND ++Y  QS+I  P + D++ + QLIA 
Sbjct: 9   AKYHSNESYVIVERKKVSFTMEEINELYGLLNDLDSYPSQSLIAEPTKGDSRMIIQLIAW 68

Query: 151 LRAKWTKTPIERLQQFPHQLTTKAKV 177
           L A WT+T    LQ +PHQLTT+A V
Sbjct: 69  LGAGWTRTTTRSLQLYPHQLTTEANV 94

[Close]

BLAST of CSPI01G13770 vs. ExPASy TrEMBL
Match: A0A5A7U806 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.1e-12
Identity = 46/81 (56.79%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 96   QESYVVVEGEKVSFTLEEINELYDLLNDPEAYSDQSIIDSPMRRDAKKVNQLIARLRAKW 155
            +ESY +VE EKV FT EEINELYDL ND  AY  Q +I      DAKK+ +LI    A  
Sbjct: 1221 RESYAIVEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADC 1280

Query: 156  TKTPIERLQQFPHQLTTKAKV 177
            T TP  RLQ FPHQLT +A V
Sbjct: 1281 TSTPTRRLQLFPHQLTIEANV 1301

[Close]

BLAST of CSPI01G13770 vs. ExPASy TrEMBL
Match: A0A5D3CVL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00870 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.1e-12
Identity = 46/81 (56.79%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 96  QESYVVVEGEKVSFTLEEINELYDLLNDPEAYSDQSIIDSPMRRDAKKVNQLIARLRAKW 155
           +ESY +VE EKV FT EEINELYDL ND  AY  Q +I      DAKK+ +LI    A  
Sbjct: 60  RESYAIVEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADC 119

Query: 156 TKTPIERLQQFPHQLTTKAKV 177
           T TP  RLQ FPHQLT +A V
Sbjct: 120 TSTPTRRLQLFPHQLTIEANV 140

[Close]

BLAST of CSPI01G13770 vs. ExPASy TrEMBL
Match: A0A0A0L9V9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G283010 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.0e-11
Identity = 60/125 (48.00%), Postives = 73/125 (58.40%), Query Frame = 0


Query: 1   MMVTKREKDKAHREDERLRQLSAKKKQSITFLEGAKSKLAEMQATEKRKLDTLADLSEQ- 60
           MMVTKREK+KA  EDE LRQLS KK++S+TFL  AKSKLAE++A ++ K DTLADLSEQ 
Sbjct: 1   MMVTKREKEKAREEDEHLRQLSTKKRKSVTFLGDAKSKLAEVRAAKQGKHDTLADLSEQV 60

Query: 61  ---------------------------EIERMSCTESLMQTEELELLSSKYPQKGKGQAN 98
                                      EIERMS TES  Q E+  LLS+K   K + +A 
Sbjct: 61  NRVAAVNQTAKQHEIDHLDIVVEELSREIERMSPTESPGQIEDPGLLSTKGLLKRQTKAG 120

[Close]

BLAST of CSPI01G13770 vs. ExPASy TrEMBL
Match: A0A5A7TGJ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00770 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.9e-11
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 0


Query: 91  ANFHPQESYVVVEGEKVSFTLEEINELYDLLNDPEAYSDQSIIDSPMRRDAKKVNQLIAR 150
           A FHP +SYV+VEG+KVSFT+EEIN+LYDL ND +AY  Q +I +P + +A  + +LIA 
Sbjct: 86  AKFHPDKSYVIVEGKKVSFTVEEINDLYDLANDSDAYPGQRLIANPRKGNANNIIKLIAW 145

Query: 151 LRAKWTKTPIERL 164
               W  TP  +L
Sbjct: 146 PGVAWMITPTMKL 158

[Close]

BLAST of CSPI01G13770 vs. NCBI nr
Match: TYK22187.1 (hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 99.4 bits (246), Expect = 3.4e-17
Identity = 49/86 (56.98%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 91  ANFHPQESYVVVEGEKVSFTLEEINELYDLLNDPEAYSDQSIIDSPMRRDAKKVNQLIAR 150
           A +H  ESYV+VE +KVSFT+EEINELY LLND ++Y  QS+I  P + D++ + QLIA 
Sbjct: 9   AKYHSNESYVIVERKKVSFTMEEINELYGLLNDLDSYPSQSLIAEPTKGDSRMIIQLIAW 68

Query: 151 LRAKWTKTPIERLQQFPHQLTTKAKV 177
           L A WT+T    LQ +PHQLTT+A V
Sbjct: 69  LGAGWTRTTTRSLQLYPHQLTTEANV 94

[Close]

BLAST of CSPI01G13770 vs. NCBI nr
Match: KAA0049609.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 4.3e-12
Identity = 46/81 (56.79%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 96   QESYVVVEGEKVSFTLEEINELYDLLNDPEAYSDQSIIDSPMRRDAKKVNQLIARLRAKW 155
            +ESY +VE EKV FT EEINELYDL ND  AY  Q +I      DAKK+ +LI    A  
Sbjct: 1221 RESYAIVEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADC 1280

Query: 156  TKTPIERLQQFPHQLTTKAKV 177
            T TP  RLQ FPHQLT +A V
Sbjct: 1281 TSTPTRRLQLFPHQLTIEANV 1301

[Close]

BLAST of CSPI01G13770 vs. NCBI nr
Match: TYK15967.1 (hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 4.3e-12
Identity = 46/81 (56.79%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 96  QESYVVVEGEKVSFTLEEINELYDLLNDPEAYSDQSIIDSPMRRDAKKVNQLIARLRAKW 155
           +ESY +VE EKV FT EEINELYDL ND  AY  Q +I      DAKK+ +LI    A  
Sbjct: 60  RESYAIVEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADC 119

Query: 156 TKTPIERLQQFPHQLTTKAKV 177
           T TP  RLQ FPHQLT +A V
Sbjct: 120 TSTPTRRLQLFPHQLTIEANV 140

[Close]

BLAST of CSPI01G13770 vs. NCBI nr
Match: KAA0041156.1 (hypothetical protein E6C27_scaffold128G00770 [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 8.0e-11
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 0


Query: 91  ANFHPQESYVVVEGEKVSFTLEEINELYDLLNDPEAYSDQSIIDSPMRRDAKKVNQLIAR 150
           A FHP +SYV+VEG+KVSFT+EEIN+LYDL ND +AY  Q +I +P + +A  + +LIA 
Sbjct: 86  AKFHPDKSYVIVEGKKVSFTVEEINDLYDLANDSDAYPGQRLIANPRKGNANNIIKLIAW 145

Query: 151 LRAKWTKTPIERL 164
               W  TP  +L
Sbjct: 146 PGVAWMITPTMKL 158

[Close]

BLAST of CSPI01G13770 vs. NCBI nr
Match: KAA0040553.1 (hypothetical protein E6C27_scaffold262G001150 [Cucumis melo var. makuwa] >TYK05596.1 hypothetical protein E5676_scaffold98G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-09
Identity = 49/138 (35.51%), Postives = 76/138 (55.07%), Query Frame = 0


Query: 33  EGAKSKLAEMQATEKRKLDTLADLSEQEIERMSCTESLMQ--TEELELLSSKYPQKGKGQ 92
           + +KSK+A  +  + +K    + +S Q+++++   E  ++  +  L+++   Y  K    
Sbjct: 22  KNSKSKVATSKPEDVQK---GSKISAQDLDKLIKIEKWLRENSVRLDIVDMFYVVK---- 81

Query: 93  ANFHPQESYVVVEGEKVSFTLEEINELYDLLNDPEAYSDQSIIDSPMRRDAKKVNQLIAR 152
             +HP ESY ++EGEKV   +EEIN+LYDL NDP  Y  Q I   P   DAK + +LIA 
Sbjct: 82  --YHPDESYAILEGEKVPLIVEEINDLYDLPNDPNVYPGQRINADPREGDAKNIIKLIAW 141

Query: 153 LRAKWTKTPIERLQQFPH 169
               W + P  RLQ F H
Sbjct: 142 PGVDWIRMPTRRLQLFLH 150

The following BLAST results are available for this feature:

BLAST of CSPI01G13770 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI01G13770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DES7	1.6e-17	56.98	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U806	2.1e-12	56.79	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE...	[more]
A0A5D3CVL7	2.1e-12	56.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L9V9	3.0e-11	48.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G283010 PE=4 SV=1	[more]
A0A5A7TGJ0	3.9e-11	52.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CSPI01G13770 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK22187.1	3.4e-17	56.98	hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa]	[more]
KAA0049609.1	4.3e-12	56.79	transposase [Cucumis melo var. makuwa]	[more]
TYK15967.1	4.3e-12	56.79	hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]	[more]
KAA0041156.1	8.0e-11	52.05	hypothetical protein E6C27_scaffold128G00770 [Cucumis melo var. makuwa]	[more]
KAA0040553.1	1.2e-09	35.51	hypothetical protein E6C27_scaffold262G001150 [Cucumis melo var. makuwa] >TYK055...	[more]

BLAST of CSPI01G13770 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G13770.1	CSPI01G13770.1	mRNA