CSPI01G13260 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G13260
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Integrase
Location	Chr1: 8734055 .. 8737038 (-)
RNA-Seq Expression	CSPI01G13260
Synteny	CSPI01G13260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCTAACATGTTGCAGCCTCAACTTCCTCGTTTTGAGGGAAAAAACTATATGCGGTGGAGCCAGCAAATGAAAGTTCTTTATGGATCTCAAGATCTTTGGGATATTGTTGACAACGGATATTCAAAGCCAGAAAGTGAGAATGATCTTTTAGCACAACGACTCAATGAGTTGAGAGATGCTAGAAAAAAGAATAAGAAGGCATTATTTTTCATCTACCAAGCTGTGGATGAAAATATTTTTGAAAGAATATCAGGAGTCTCTACTGCTAAAGCAGCATGGGATGCATTGCAAAATTTGTATGAATGTGAAGAAAATGCAAAATTGGTCCGATTACAAACACTTCGAGCTGAATTTGATACAATTCGAATGAAAGATTCTGAAACTATTGAAGAAATTTTCAACTGTGTTCTCTTATTGTTAATCAATTGAGATCAAATGGAGAAACAATTGAAGATCAAAGGATTGTTGAGAAGATTCTTAGAAGCATGACTAGAAGATATGGGCATATTGTTGTAGCAATTGAAGAATCCAAAGATTTGTCAACTCTCTCTATAAATAGTTTAATGGGATCTCTTCATTCTCATGAGCTCTGATTGAAGATGTTTGATTCTACTCCTTCAGAAGAAGCTTTTCATATGCAGTCCTCCTATTGAGGTCGATCCAATGGAAGAAGATGTGGACGTGGTGGCAGTGGCAATGGACGATCCAACGTTGTAACAAATACAAAGTCAAAAAGCAGAGACAATCAATCCTTTTCAAATAGAGGACGGGGAAGAAGTTCAAATAGAGGAAGTGGTAGAAGTAGTGGTCGTGGAGATTTTTCTCACATACAATGTTTCAATTGTAGACGTTATGGACATTTTCAAGCAGACTGTTGGTCTAAGAAGACTAATTCTAATCAAGCAGAAACCACACTAATGCATGAGCAATCAAATAATGATCAAGGTCTTCTCTTCCTCACTCTCAATGTTCAAGAATCAAGCACTGAAGAAATATGGTATCTTGATAGTGGTTGTAGTAATCACATGACAAGAAGAAAGGATATTTTTATATCTGTAGATGAATCTCATCAAAATGTAGTGAAGATTGGTGACAACAAGAAGCTTGAAGTCAAATGAAAATGAGATATTCTTATCAAGAAAAAAAAGGGGAACAAAAAGAATTACTGATGTGTATTATGTTTCAGGTCTCAAACACAATCTTTTAAGTGTTGGACAACTTCTCCTAAGAGGACATGAGGTTATCTTTAAAGATAACCTCATGTCCTCTTAGGAGAAGTTGTCCAACACTTAAAAGATTGTGTTTGAGACCTGAAACATAATACACATCAGTAATTCTTTTTGTTCCCCTTTTTTTTCTTGATAAGAATATCTCATTTTCCTTTGACTTCAAGCATCTTGTTGTCACCAGTCTTCACTACATTTTGATGAGATTCATCTAAAGATATAAAAATATCCTTTCTTCCTGTCATGTGGTTACTACAACCACTATCAAGATACCATATTTCTTCAGTGCTTGATTTTTGAGCTTGTTCATACAGACTTATGTGGACCTATGAGAACTACTACGCATGGAGGTAACTGTTATTTTCTCACATTTATTGATGACTAGAGTCGAAAAACATGGATTTATCTACTAAAAGAAAAGAGTGCTACTTTCGAATGTTTCAAGACATTCAAAGCAATGGTGGAAAATGAAAGTAACTTGAAATTGAAATCATTATGTTCGGATCGTGGAGGAGAATATATTGTTTTTGCAGATTTCTTGAAGGAAAATGGAATCAAGCATCAGAAGACTGTTCGAAGAACTCCTCAACAAAACGGAGTTGCAGAGAGGAAAAATAGAATAATAATGGAACTTGCAAGAAGTATGTTGAAGGCAAAGAAGCTTCCTGATCAATTTTGGGGGTGGGGAGACACAGTAACTTATGCTATTTATCTTCTAAATAGAGCTTCAACGGAAAGTGTGCAATGTATTACTCCTCAAGAAGCATGGAGCGGATTGAAACCAACTGTTAGTCACCTAAGAATGTTTGGGTGCATTGCTTACTCTCACATTTCAGATGAGAAAAAAGGTAAGCTAGATGATAAATCAGAAAAATGCATTTTTGCTGGGTACAGTGAGAACTCCAAGGCCTACAGACTATACAACCCGATAAGTAAGAAAGTTATTATTAGTCGAGATGTCAAGTTCGATGAAGCAAAATTGTGGCAATGGAATGCACCAAATGAAGACCAAAATCCATTACATGTTGATATGGATGGAAAAAAAGATGCTCGAGACTTGGAGCTTGAAGTAACTCAACCACTGACTTCACCTTCTTCATCACACTCCACAAGTGATGAAGAAACTACTCCAAGGAAGACCAGAAATATTCAAGAGATCTATAATACTTCAAGAAGGATACTAGATGAAGAACATGTTGATTTTGCTTTATTTGCAAATGTTGATCCTGTATACTTTGAAGAAGCAATTCAAGATGAAAATTGGAAAGATGCAATGAATCAAGAGATTGATGCAATAAGAAGAAACGAGATATGGGAGTTAGTAAAATTACCAGAAAATAAAAGGGCTCTTGGAGTCAAATGGATCTATAGAACAAAGCTAAAGCAAAACGGAGAAGTGCAAAAATACAAAGCCAGACTCGTTGTAAAAGGTTACAAACAAAAGTTTGGTATGGATTATAAAGAAGTTTTTGCACCGGTAACTCGCTTGGAGACTGTTCGTTTGTTGTTAGCCCTTGCAGCAAAAAATAACTGGAAAGTTCATCAAATGGATGTAAAGTCAGCATTCCTAAATGGGTATTTAGAGGATGAAATATATGTTGAGCAGCCCACCGGTTATGCAAAGATTGGAGAAGAAAATAAGGTGTATCGATTAAAGAAAGTCTTGTATGGGCTAAAGCAAGCACCAAGGGCTTGGTACAGTCGCATCGACAATTTTTTCTTAAAGGATGGTTTCAGAAGATGTCCATATGA

mRNA sequence

ATGTCATCTAACATGTTGCAGCCTCAACTTCCTCGTTTTGAGGGAAAAAACTATATGCGGTGGAGCCAGCAAATGAAAGTTCTTTATGGATCTCAAGATCTTTGGGATATTGTTGACAACGGATATTCAAAGCCAGAAAGTGAGAATGATCTTTTAGCACAACGACTCAATGAGTTGAGAGATGCTAGAAAAAAGAATAAGAAGGCATTATTTTTCATCTACCAAGCTGTGGATGAAAATATTTTTGAAAGAATATCAGGAGTCTCTACTGCTAAAGCAGCATGGGATGCATTGCAAAATTTGTATGAATGTGAAGAAAATGCAAAATTGGTCCGATTACAAACACTTCGAGCTGAATTTGATACAATTCGAATGAAAGATTCTGAAACTATTGAAGAAATTTTCAACTGTAAGAAGCTTTTCATATGCAGTCCTCCTATTGAGGTCGATCCAATGGAAGAAGATGTGGACGTGGTGGCAGTGGCAATGGACGATCCAACGTTACGTTATGGACATTTTCAAGCAGACTGTTGGTCTAAGAAGACTAATTCTAATCAAGCAGAAACCACACTAATGCATGAGCAATCAAATAATGATCAAGGTCTTCTCTTCCTCACTCTCAATGTTCAAGAATCAAGCACTGAAGAAATATGGTATCTTGATAGTGGTTGTAGTAATCACATGACAAGAAGAAAGGATATTTTTATATCTGTAGATGAATCTCATCAAAATGTAGTGAAGATTGGTCTCAAACACAATCTTTTAAGTGTTGGACAACTTCTCCTAAGAGGACATGAGTGCTTGATTTTTGAGCTTGTTCATACAGACTTATGTGGACCTATGAGAACTACTACGCATGGAGATTTCTTGAAGGAAAATGGAATCAAGCATCAGAAGACTGTTCGAAGAACTCCTCAACAAAACGGAGTTGCAGAGAGGAAAAATAGAATAATAATGGAACTTGCAAGAAGTATGTTGAAGGCAAAGAAGCTTCCTGATCAATTTTGGGGGTGGGGAGACACAGTAACTTATGCTATTTATCTTCTAAATAGAGCTTCAACGGAAAGTGTGCAATGTATTACTCCTCAAGAAGCATGGAGCGGATTGAAACCAACTGTTAGTCACCTAAGAATGTTTGGGTGCATTGCTTACTCTCACATTTCAGATGAGAAAAAAGGTAAGCTAGATGATAAATCAGAAAAATGCATTTTTGCTGGGTACAGTGAGAACTCCAAGGCCTACAGACTATACAACCCGATAAGTAAGAAAGTTATTATTAGTCGAGATGTCAAGTTCGATGAAGCAAAATTGTGGCAATGGAATGCACCAAATGAAGACCAAAATCCATTACATGTTGATATGGATGGAAAAAAAGATGCTCGAGACTTGGAGCTTGAAGTAACTCAACCACTGACTTCACCTTCTTCATCACACTCCACAAGTGATGAAGAAACTACTCCAAGGAAGACCAGAAATATTCAAGAGATCTATAATACTTCAAGAAGGATACTAGATGAAGAACATGTTGATTTTGCTTTATTTGCAAATGTTGATCCTGTATACTTTGAAGAAGCAATTCAAGATGAAAATTGGAAAGATGCAATGAATCAAGAGATTGATGCAATAAGAAGAAACGAGATATGGGAGTTAGTAAAATTACCAGAAAATAAAAGGGCTCTTGGAGTCAAATGGATCTATAGAACAAAGCTAAAGCAAAACGGAGAAGTGCAAAAATACAAAGCCAGACTCGTTGTAAAAGGTTACAAACAAAAGTTTGGTATGGATTATAAAGAAGTTTTTGCACCGGTAACTCGCTTGGAGACTGTTCGTTTGTTGTTAGCCCTTGCAGCAAAAAATAACTGGAAAGTTCATCAAATGGATGTAAAGTCAGCATTCCTAAATGGGTATTTAGAGGATGAAATATATGTTGAGCAGCCCACCGGTTATGCAAAGATTGGAGAAGAAAATAAGAAGATGTCCATATGA

Coding sequence (CDS)

ATGTCATCTAACATGTTGCAGCCTCAACTTCCTCGTTTTGAGGGAAAAAACTATATGCGGTGGAGCCAGCAAATGAAAGTTCTTTATGGATCTCAAGATCTTTGGGATATTGTTGACAACGGATATTCAAAGCCAGAAAGTGAGAATGATCTTTTAGCACAACGACTCAATGAGTTGAGAGATGCTAGAAAAAAGAATAAGAAGGCATTATTTTTCATCTACCAAGCTGTGGATGAAAATATTTTTGAAAGAATATCAGGAGTCTCTACTGCTAAAGCAGCATGGGATGCATTGCAAAATTTGTATGAATGTGAAGAAAATGCAAAATTGGTCCGATTACAAACACTTCGAGCTGAATTTGATACAATTCGAATGAAAGATTCTGAAACTATTGAAGAAATTTTCAACTGTAAGAAGCTTTTCATATGCAGTCCTCCTATTGAGGTCGATCCAATGGAAGAAGATGTGGACGTGGTGGCAGTGGCAATGGACGATCCAACGTTACGTTATGGACATTTTCAAGCAGACTGTTGGTCTAAGAAGACTAATTCTAATCAAGCAGAAACCACACTAATGCATGAGCAATCAAATAATGATCAAGGTCTTCTCTTCCTCACTCTCAATGTTCAAGAATCAAGCACTGAAGAAATATGGTATCTTGATAGTGGTTGTAGTAATCACATGACAAGAAGAAAGGATATTTTTATATCTGTAGATGAATCTCATCAAAATGTAGTGAAGATTGGTCTCAAACACAATCTTTTAAGTGTTGGACAACTTCTCCTAAGAGGACATGAGTGCTTGATTTTTGAGCTTGTTCATACAGACTTATGTGGACCTATGAGAACTACTACGCATGGAGATTTCTTGAAGGAAAATGGAATCAAGCATCAGAAGACTGTTCGAAGAACTCCTCAACAAAACGGAGTTGCAGAGAGGAAAAATAGAATAATAATGGAACTTGCAAGAAGTATGTTGAAGGCAAAGAAGCTTCCTGATCAATTTTGGGGGTGGGGAGACACAGTAACTTATGCTATTTATCTTCTAAATAGAGCTTCAACGGAAAGTGTGCAATGTATTACTCCTCAAGAAGCATGGAGCGGATTGAAACCAACTGTTAGTCACCTAAGAATGTTTGGGTGCATTGCTTACTCTCACATTTCAGATGAGAAAAAAGGTAAGCTAGATGATAAATCAGAAAAATGCATTTTTGCTGGGTACAGTGAGAACTCCAAGGCCTACAGACTATACAACCCGATAAGTAAGAAAGTTATTATTAGTCGAGATGTCAAGTTCGATGAAGCAAAATTGTGGCAATGGAATGCACCAAATGAAGACCAAAATCCATTACATGTTGATATGGATGGAAAAAAAGATGCTCGAGACTTGGAGCTTGAAGTAACTCAACCACTGACTTCACCTTCTTCATCACACTCCACAAGTGATGAAGAAACTACTCCAAGGAAGACCAGAAATATTCAAGAGATCTATAATACTTCAAGAAGGATACTAGATGAAGAACATGTTGATTTTGCTTTATTTGCAAATGTTGATCCTGTATACTTTGAAGAAGCAATTCAAGATGAAAATTGGAAAGATGCAATGAATCAAGAGATTGATGCAATAAGAAGAAACGAGATATGGGAGTTAGTAAAATTACCAGAAAATAAAAGGGCTCTTGGAGTCAAATGGATCTATAGAACAAAGCTAAAGCAAAACGGAGAAGTGCAAAAATACAAAGCCAGACTCGTTGTAAAAGGTTACAAACAAAAGTTTGGTATGGATTATAAAGAAGTTTTTGCACCGGTAACTCGCTTGGAGACTGTTCGTTTGTTGTTAGCCCTTGCAGCAAAAAATAACTGGAAAGTTCATCAAATGGATGTAAAGTCAGCATTCCTAAATGGGTATTTAGAGGATGAAATATATGTTGAGCAGCCCACCGGTTATGCAAAGATTGGAGAAGAAAATAAGAAGATGTCCATATGA

Protein sequence

MSSNMLQPQLPRFEGKNYMRWSQQMKVLYGSQDLWDIVDNGYSKPESENDLLAQRLNELRDARKKNKKALFFIYQAVDENIFERISGVSTAKAAWDALQNLYECEENAKLVRLQTLRAEFDTIRMKDSETIEEIFNCKKLFICSPPIEVDPMEEDVDVVAVAMDDPTLRYGHFQADCWSKKTNSNQAETTLMHEQSNNDQGLLFLTLNVQESSTEEIWYLDSGCSNHMTRRKDIFISVDESHQNVVKIGLKHNLLSVGQLLLRGHECLIFELVHTDLCGPMRTTTHGDFLKENGIKHQKTVRRTPQQNGVAERKNRIIMELARSMLKAKKLPDQFWGWGDTVTYAIYLLNRASTESVQCITPQEAWSGLKPTVSHLRMFGCIAYSHISDEKKGKLDDKSEKCIFAGYSENSKAYRLYNPISKKVIISRDVKFDEAKLWQWNAPNEDQNPLHVDMDGKKDARDLELEVTQPLTSPSSSHSTSDEETTPRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVYFEEAIQDENWKDAMNQEIDAIRRNEIWELVKLPENKRALGVKWIYRTKLKQNGEVQKYKARLVVKGYKQKFGMDYKEVFAPVTRLETVRLLLALAAKNNWKVHQMDVKSAFLNGYLEDEIYVEQPTGYAKIGEENKKMSI*

Homology

[Close]

BLAST of CSPI01G13260 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 6.2e-67
Identity = 149/418 (35.65%), Postives = 243/418 (58.13%), Query Frame = 0


Query: 273 VHTDLCGPMRTTTHGDFLKENGIKHQKTVRRTPQQNGVAERKNRIIMELARSMLKAKKLP 332
           + +D  G   +    ++   +GI+H+KTV  TPQ NGVAER NR I+E  RSML+  KLP
Sbjct: 547 LRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLP 606

Query: 333 DQFWGWGDTVTYAIYLLNRASTESVQCITPQEAWSGLKPTVSHLRMFGCIAYSHISDEKK 392
             F  WG+ V  A YL+NR+ +  +    P+  W+  + + SHL++FGC A++H+  E++
Sbjct: 607 KSF--WGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQR 666

Query: 393 GKLDDKSEKCIFAGYSENSKAYRLYNPISKKVIISRDVKFDEAKLWQWNAPNEDQNPLHV 452
            KLDDKS  CIF GY +    YRL++P+ KKVI SRDV F E+++               
Sbjct: 667 TKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEV-----------RTAA 726

Query: 453 DMDGKKDARDLELEVTQPLTS--PSSSHSTSDE------------ETTPRKTRNIQEIYN 512
           DM  K     +   VT P TS  P+S+ ST+DE            E   +    ++E+ +
Sbjct: 727 DMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEH 786

Query: 513 TSR--------RILDEEHVDFALFANVDPVYFEEAIQDENWKD------------AMNQE 572
            ++        R  +   V+   + + + V   +  + E+ K+            AM +E
Sbjct: 787 PTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEE 846

Query: 573 IDAIRRNEIWELVKLPENKRALGVKWIYRTKLKQNGEVQKYKARLVVKGYKQKFGMDYKE 632
           ++++++N  ++LV+LP+ KR L  KW+++ K   + ++ +YKARLVVKG++QK G+D+ E
Sbjct: 847 MESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDE 906

Query: 633 VFAPVTRLETVRLLLALAAKNNWKVHQMDVKSAFLNGYLEDEIYVEQPTGYAKIGEEN 657
           +F+PV ++ ++R +L+LAA  + +V Q+DVK+AFL+G LE+EIY+EQP G+   G+++
Sbjct: 907 IFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKH 951

[Close]

BLAST of CSPI01G13260 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 208.0 bits (528), Expect = 3.3e-52
Identity = 143/466 (30.69%), Postives = 214/466 (45.92%), Query Frame = 0


Query: 289  FLKENGIKHQKTVRRTPQQNGVAERKNRIIMELARSMLKAKKLPDQFWGWGDTVTYAIYL 348
            F  + GI +  TV  TPQ NGV+ER  R I E AR+M+   KL   F  WG+ V  A YL
Sbjct: 563  FCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSF--WGEAVLTATYL 622

Query: 349  LNRASTESV--QCITPQEAWSGLKPTVSHLRMFGCIAYSHISDEKKGKLDDKSEKCIFAG 408
            +NR  + ++     TP E W   KP + HLR+FG   Y HI + K+GK DDKS K IF G
Sbjct: 623  INRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKN-KQGKFDDKSFKSIFVG 682

Query: 409  YSENSKAYRLYNPISKKVIISRDVKFDEA------------------------------- 468
            Y  N   ++L++ +++K I++RDV  DE                                
Sbjct: 683  YEPN--GFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSR 742

Query: 469  ------------------------------------KLWQWNAPNEDQNPLHVDM----- 528
                                                K+ Q   PNE +   ++       
Sbjct: 743  KIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSK 802

Query: 529  --------DGKKDARDLELEVTQPLTSPSSSHSTSDEE-------TTPRKTRNIQEIYNT 588
                    + KK  RD  L  ++   +P+ S  +   E         P K   I+ I   
Sbjct: 803  ESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRR 862

Query: 589  SRRILDEEHVDF---------------ALFANVDPVYFEEAIQDE--NWKDAMNQEIDAI 648
            S R+  +  + +                +F +V   + E   +D+  +W++A+N E++A 
Sbjct: 863  SERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAH 922

[Close]

BLAST of CSPI01G13260 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 9.6e-44
Identity = 124/488 (25.41%), Postives = 207/488 (42.42%), Query Frame = 0


Query: 288  DFLKENGIKHQKTVRRTPQQNGVAERKNRIIMELARSMLKAKKLPDQFWGWGDTVTYAIY 347
            ++  ++GI H  +   TP+ NG++ERK+R I+E   ++L    +P  +W +   V  A+Y
Sbjct: 602  EYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAV--AVY 661

Query: 348  LLNRASTESVQCITPQEAWSGLKPTVSHLRMFGCIAYSHISDEKKGKLDDKSEKCIFAGY 407
            L+NR  T  +Q  +P +   G  P    LR+FGC  Y  +    + KLDDKS +C+F GY
Sbjct: 662  LINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGY 721

Query: 408  SENSKAYRLYNPISKKVIISRDVKFDE----------------------AKLWQ------ 467
            S    AY   +  + ++ ISR V+FDE                      + +W       
Sbjct: 722  SLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLP 781

Query: 468  ------------------------------------------------------------ 527
                                                                        
Sbjct: 782  TRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGP 841

Query: 528  --WNAPNEDQNPLHVDMDGKKD--ARDLELEVTQPLTSPSSSHSTSDEETTPRKTRN--- 587
                 P + Q   H   +  ++    +   ++ Q L++P+ S S+S   TT   + +   
Sbjct: 842  QPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSP 901

Query: 588  ------------IQEIYNTSRRILDEEH------------------VDFALFANVDPVYF 647
                        + +I N + +     H                  +  +L A  +P   
Sbjct: 902  TPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTA 961

Query: 648  EEAIQDENWKDAMNQEIDAIRRNEIWELV-KLPENKRALGVKWIYRTKLKQNGEVQKYKA 650
             +A++DE W++AM  EI+A   N  W+LV   P +   +G +WI+  K   +G + +YKA
Sbjct: 962  IQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKA 1021

[Close]

BLAST of CSPI01G13260 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.1e-42
Identity = 129/492 (26.22%), Postives = 210/492 (42.68%), Query Frame = 0


Query: 288  DFLKENGIKHQKTVRRTPQQNGVAERKNRIIMELARSMLKAKKLPDQFWGWGDTVTYAIY 347
            D+L ++GI H  +   TP+ NG++ERK+R I+E+  ++L    +P  +W +  +V  A+Y
Sbjct: 581  DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSV--AVY 640

Query: 348  LLNRASTESVQCITPQEAWSGLKPTVSHLRMFGCIAYSHISDEKKGKLDDKSEKCIFAGY 407
            L+NR  T  +Q  +P +   G  P    L++FGC  Y  +    + KL+DKS++C F GY
Sbjct: 641  LINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGY 700

Query: 408  SENSKAYRLYNPISKKVIISRDVKFDE---------------AKLWQWNAPNEDQN---- 467
            S    AY   +  + ++  SR V+FDE                +    +APN   +    
Sbjct: 701  SLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLP 760

Query: 468  --PL----------HVDMDGKKDARDLELEVTQ---------PLTSPSSSHSTSDEETTP 527
              PL          H+D   +  +    L  TQ          ++SPSSS  T+     P
Sbjct: 761  TTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGP 820

Query: 528  RKTRNIQEIYNTS--------------------------RRILDEEHVD----------- 587
            + T    +  N++                          +  +   H+            
Sbjct: 821  QPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNS 880

Query: 588  ----------------------------------------------------FALFANVD 647
                                                                 +L AN +
Sbjct: 881  PSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSE 940

Query: 648  PVYFEEAIQDENWKDAMNQEIDAIRRNEIWELV-KLPENKRALGVKWIYRTKLKQNGEVQ 650
            P    +A++D+ W+ AM  EI+A   N  W+LV   P +   +G +WI+  K   +G + 
Sbjct: 941  PRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLN 1000

[Close]

BLAST of CSPI01G13260 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.8e-16
Identity = 40/92 (43.48%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 525 AIQDENWKDAMNQEIDAIRRNEIWELVKLPENKRALGVKWIYRTKLKQNGEVQKYKARLV 584
           A++D  W  AM +E+DA+ RN+ W LV  P N+  LG KW+++TKL  +G + + KARLV
Sbjct: 34  ALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLV 93

Query: 585 VKGYKQKFGMDYKEVFAPVTRLETVRLLLALA 617
            KG+ Q+ G+ + E ++PV R  T+R +L +A
Sbjct: 94  AKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of CSPI01G13260 vs. ExPASy TrEMBL
Match: A0A5A7UDP7 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001450 PE=4 SV=1)

HSP 1 Score: 686.8 bits (1771), Expect = 8.9e-194
Identity = 414/978 (42.33%), Postives = 523/978 (53.48%), Query Frame = 0


Query: 2   SSNMLQPQLPRFEGKNYMRWSQQMKVLYGSQDLWDIVDNGYSKPESENDLLAQRLNELRD 61
           + NMLQPQLPRF GKN+ +WS QMKVLYGSQ+LWDIV+ GY+K E++++L  Q+L ELR+
Sbjct: 4   NGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTKVENQSELTNQQLVELRE 63

Query: 62  ARKKNKKALFFIYQAVDENIFERISGVSTAKAAWDALQNLYECEENAKLVRLQTLRAEFD 121
            RKK+KKALFFIYQAVDE IFERIS  ++AKAAWD L++ Y+ E+  K++RLQ LR+EFD
Sbjct: 64  NRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRSEFD 123

Query: 122 TIRMKDSETIEEIFNCKKLFICS---------------PPIEVDPMEEDVDVVAV--AMD 181
            I+MK++ETIEE FN   + + S                 +   P + +  VVA+  + D
Sbjct: 124 CIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKD 183

Query: 182 DPTL-------------------------------------------------------- 241
             TL                                                        
Sbjct: 184 LSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNYDNR 243

Query: 242 ----------------------------------------------RYGHFQADCWSKKT 301
                                                         +YGHFQA+CW+ K 
Sbjct: 244 SGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWALKN 303

Query: 302 NSNQAETTLMHEQSNNDQGLLFLTLNVQESSTEEIWYLDSGCSNHMTRRKDIFISVDESH 361
                   +  EQ   D+G+LFL  +VQ++  E  WYLDSGCSNHMT  + IF+++DES 
Sbjct: 304 GVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESF 363

Query: 362 QNVVKI--------------------------------GLKHNLLSVGQLLLRG------ 421
           Q+ VK                                 GLKHNLLS+GQLL RG      
Sbjct: 364 QSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFE 423

Query: 422 ------------------------------------------------------------ 481
                                                                       
Sbjct: 424 GDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSL 483

Query: 482 ----------------HE------CLI-------------------FELVHTDLCGPMRT 541
                           HE      C++                    EL+HTDLCGPMRT
Sbjct: 484 SYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRT 543

Query: 542 TTH--------------------------------------------------------- 601
           TT+                                                         
Sbjct: 544 TTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGE 603

Query: 602 ----GDFLKENGIKHQKTVRRTPQQNGVAERKNRIIMELARSMLKAKKLPDQFWGWGDTV 658
               G+F KE GI HQ T R TPQQNGVAERKNR IME+ARSMLKAK LP++F  WGD V
Sbjct: 604 YIAFGNFFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEF--WGDAV 663

[Close]

BLAST of CSPI01G13260 vs. ExPASy TrEMBL
Match: A0A5A7UDJ2 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001470 PE=4 SV=1)

HSP 1 Score: 686.4 bits (1770), Expect = 1.2e-193
Identity = 413/978 (42.23%), Postives = 524/978 (53.58%), Query Frame = 0


Query: 2   SSNMLQPQLPRFEGKNYMRWSQQMKVLYGSQDLWDIVDNGYSKPESENDLLAQRLNELRD 61
           + NMLQPQLPRF GKN+ +WS QMKVLYGSQ+LWDIV+ GY++ E++++L  Q+L ELR+
Sbjct: 4   NGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRE 63

Query: 62  ARKKNKKALFFIYQAVDENIFERISGVSTAKAAWDALQNLYECEENAKLVRLQTLRAEFD 121
            RKK+KKALFFIYQAVDE IFERIS  ++AKAAWD L++ Y+ E+  K++RLQ LR+EFD
Sbjct: 64  NRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRSEFD 123

Query: 122 TIRMKDSETIEEIFN---------------------CKKLFICSP---PIEVDPMEEDVD 181
            I+MK++ETIEE FN                      +K+    P      V  +EE  D
Sbjct: 124 CIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKD 183

Query: 182 VVAVAM------------------DDPTL------------------------------- 241
           +  +++                  D+P                                 
Sbjct: 184 LSTLSINSLMGSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNYDNR 243

Query: 242 ----------------------------------------------RYGHFQADCWSKKT 301
                                                         +YGHFQA+CW+ K 
Sbjct: 244 SGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWALKN 303

Query: 302 NSNQAETTLMHEQSNNDQGLLFLTLNVQESSTEEIWYLDSGCSNHMTRRKDIFISVDESH 361
                   +  EQ   D+G+LFL  +VQ++  E  WYLDSGCSNHMT  + IF+++DES 
Sbjct: 304 GVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESF 363

Query: 362 QNVVKI--------------------------------GLKHNLLSVGQLLLRG------ 421
           Q+ VK                                 GLKHNLLS+GQLL RG      
Sbjct: 364 QSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFE 423

Query: 422 ------------------------------------------------------------ 481
                                                                       
Sbjct: 424 GDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSL 483

Query: 482 ----------------HE------CLI-------------------FELVHTDLCGPMRT 541
                           HE      C++                    EL+HTDLCGPMRT
Sbjct: 484 SYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRT 543

Query: 542 TTH--------------------------------------------------------- 601
           TT+                                                         
Sbjct: 544 TTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGE 603

Query: 602 ----GDFLKENGIKHQKTVRRTPQQNGVAERKNRIIMELARSMLKAKKLPDQFWGWGDTV 658
               G+F KE GI HQ T R TPQQNGVAERKNR IME+ARSMLKAK LP++F  WGD V
Sbjct: 604 YIAFGNFFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEF--WGDAV 663

[Close]

BLAST of CSPI01G13260 vs. ExPASy TrEMBL
Match: A0A5A7TA63 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2967G00050 PE=4 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 2.0e-193
Identity = 413/978 (42.23%), Postives = 523/978 (53.48%), Query Frame = 0


Query: 2   SSNMLQPQLPRFEGKNYMRWSQQMKVLYGSQDLWDIVDNGYSKPESENDLLAQRLNELRD 61
           + NMLQPQLPRF GKN+ +WS QMKVLYGSQ+LWDIV+ GY++ E++++L  Q+L ELR+
Sbjct: 4   NGNMLQPQLPRFSGKNFYQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRE 63

Query: 62  ARKKNKKALFFIYQAVDENIFERISGVSTAKAAWDALQNLYECEENAKLVRLQTLRAEFD 121
            RKK+KKALFFIYQAVDE IFERIS  ++AKAAWD L++ Y+ E+  K++RLQ LR+EFD
Sbjct: 64  NRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRSEFD 123

Query: 122 TIRMKDSETIEEIFNCKKLFICS---------------PPIEVDPMEEDVDVVAV--AMD 181
            I+MK++ETIEE FN   + + S                 +   P + +  VVA+  + D
Sbjct: 124 CIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKD 183

Query: 182 DPTL-------------------------------------------------------- 241
             TL                                                        
Sbjct: 184 LSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNYDNR 243

Query: 242 ----------------------------------------------RYGHFQADCWSKKT 301
                                                         +YGHFQA+CW+ K 
Sbjct: 244 SGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWALKN 303

Query: 302 NSNQAETTLMHEQSNNDQGLLFLTLNVQESSTEEIWYLDSGCSNHMTRRKDIFISVDESH 361
                   +  EQ   D+G+LFL  +VQ++  E  WYLDSGCSNHMT  + IF+++DES 
Sbjct: 304 GVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESF 363

Query: 362 QNVVKI--------------------------------GLKHNLLSVGQLLLRG------ 421
           Q+ VK                                 GLKHNLLS+GQLL RG      
Sbjct: 364 QSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFE 423

Query: 422 ------------------------------------------------------------ 481
                                                                       
Sbjct: 424 GDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSL 483

Query: 482 ----------------HE------CLI-------------------FELVHTDLCGPMRT 541
                           HE      C++                    EL+HTDLCGPMRT
Sbjct: 484 SYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRT 543

Query: 542 TTH--------------------------------------------------------- 601
           TT+                                                         
Sbjct: 544 TTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGE 603

Query: 602 ----GDFLKENGIKHQKTVRRTPQQNGVAERKNRIIMELARSMLKAKKLPDQFWGWGDTV 658
               G+F KE GI HQ T R TPQQNGVAERKNR IME+ARSMLKAK LP++F  WGD V
Sbjct: 604 YIAFGNFFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEF--WGDAV 663

[Close]

BLAST of CSPI01G13260 vs. ExPASy TrEMBL
Match: A0A5D3BQ81 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 2.6e-193
Identity = 413/978 (42.23%), Postives = 523/978 (53.48%), Query Frame = 0


Query: 2   SSNMLQPQLPRFEGKNYMRWSQQMKVLYGSQDLWDIVDNGYSKPESENDLLAQRLNELRD 61
           + NMLQPQLPRF GKN+ +WS QMKVLYGSQ+LWDIV+ GY++ E++++L  Q+L ELR+
Sbjct: 4   NGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRE 63

Query: 62  ARKKNKKALFFIYQAVDENIFERISGVSTAKAAWDALQNLYECEENAKLVRLQTLRAEFD 121
            RKK+KKALFFIYQAVDE IFERIS  ++AKAAWD L++ Y+ E+  K++RLQ LR+EFD
Sbjct: 64  NRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRSEFD 123

Query: 122 TIRMKDSETIEEIFNCKKLFICS---------------PPIEVDPMEEDVDVVAV--AMD 181
            I+MK++ETIEE FN   + + S                 +   P + +  VVA+  + D
Sbjct: 124 CIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKD 183

Query: 182 DPTL-------------------------------------------------------- 241
             TL                                                        
Sbjct: 184 LSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNYDNR 243

Query: 242 ----------------------------------------------RYGHFQADCWSKKT 301
                                                         +YGHFQA+CW+ K 
Sbjct: 244 SGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWALKN 303

Query: 302 NSNQAETTLMHEQSNNDQGLLFLTLNVQESSTEEIWYLDSGCSNHMTRRKDIFISVDESH 361
                   +  EQ   D+G+LFL  +VQ++  E  WYLDSGCSNHMT  + IF+++DES 
Sbjct: 304 GVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESF 363

Query: 362 QNVVKI--------------------------------GLKHNLLSVGQLLLRG------ 421
           Q+ VK                                 GLKHNLLS+GQLL RG      
Sbjct: 364 QSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFE 423

Query: 422 ------------------------------------------------------------ 481
                                                                       
Sbjct: 424 GDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSL 483

Query: 482 ----------------HE------CLI-------------------FELVHTDLCGPMRT 541
                           HE      C++                    EL+HTDLCGPMRT
Sbjct: 484 SYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRT 543

Query: 542 TTH--------------------------------------------------------- 601
           TT+                                                         
Sbjct: 544 TTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGE 603

Query: 602 ----GDFLKENGIKHQKTVRRTPQQNGVAERKNRIIMELARSMLKAKKLPDQFWGWGDTV 658
               G+F KE GI HQ T R TPQQNGVAERKNR IME+ARSMLKAK LP++F  WGD V
Sbjct: 604 YIAFGNFFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEF--WGDAV 663

[Close]

BLAST of CSPI01G13260 vs. ExPASy TrEMBL
Match: A0A5D3E3T2 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 2.6e-193
Identity = 413/978 (42.23%), Postives = 523/978 (53.48%), Query Frame = 0


Query: 2   SSNMLQPQLPRFEGKNYMRWSQQMKVLYGSQDLWDIVDNGYSKPESENDLLAQRLNELRD 61
           + NMLQPQLPRF GKN+ +WS QMKVLYGSQ+LWDIV+ GY++ E++++L  Q+L ELR+
Sbjct: 4   NGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRE 63

Query: 62  ARKKNKKALFFIYQAVDENIFERISGVSTAKAAWDALQNLYECEENAKLVRLQTLRAEFD 121
            RKK+KKALFFIYQAVDE IFERIS  ++AKAAWD L++ Y+ E+  K++RLQ LR+EFD
Sbjct: 64  NRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRSEFD 123

Query: 122 TIRMKDSETIEEIFNCKKLFICS---------------PPIEVDPMEEDVDVVAV--AMD 181
            I+MK++ETIEE FN   + + S                 +   P + +  VVA+  + D
Sbjct: 124 CIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKD 183

Query: 182 DPTL-------------------------------------------------------- 241
             TL                                                        
Sbjct: 184 LSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNYDNR 243

Query: 242 ----------------------------------------------RYGHFQADCWSKKT 301
                                                         +YGHFQA+CW+ K 
Sbjct: 244 SGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWALKN 303

Query: 302 NSNQAETTLMHEQSNNDQGLLFLTLNVQESSTEEIWYLDSGCSNHMTRRKDIFISVDESH 361
                   +  EQ   D+G+LFL  +VQ++  E  WYLDSGCSNHMT  + IF+++DES 
Sbjct: 304 GVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESF 363

Query: 362 QNVVKI--------------------------------GLKHNLLSVGQLLLRG------ 421
           Q+ VK                                 GLKHNLLS+GQLL RG      
Sbjct: 364 QSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFE 423

Query: 422 ------------------------------------------------------------ 481
                                                                       
Sbjct: 424 GDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSL 483

Query: 482 ----------------HE------CLI-------------------FELVHTDLCGPMRT 541
                           HE      C++                    EL+HTDLCGPMRT
Sbjct: 484 SYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRT 543

Query: 542 TTH--------------------------------------------------------- 601
           TT+                                                         
Sbjct: 544 TTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGE 603

Query: 602 ----GDFLKENGIKHQKTVRRTPQQNGVAERKNRIIMELARSMLKAKKLPDQFWGWGDTV 658
               G+F KE GI HQ T R TPQQNGVAERKNR IME+ARSMLKAK LP++F  WGD V
Sbjct: 604 YIAFGNFFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEF--WGDAV 663

[Close]

BLAST of CSPI01G13260 vs. NCBI nr
Match: KAA0051599.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 686.8 bits (1771), Expect = 1.8e-193
Identity = 414/978 (42.33%), Postives = 523/978 (53.48%), Query Frame = 0


Query: 2   SSNMLQPQLPRFEGKNYMRWSQQMKVLYGSQDLWDIVDNGYSKPESENDLLAQRLNELRD 61
           + NMLQPQLPRF GKN+ +WS QMKVLYGSQ+LWDIV+ GY+K E++++L  Q+L ELR+
Sbjct: 4   NGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTKVENQSELTNQQLVELRE 63

Query: 62  ARKKNKKALFFIYQAVDENIFERISGVSTAKAAWDALQNLYECEENAKLVRLQTLRAEFD 121
            RKK+KKALFFIYQAVDE IFERIS  ++AKAAWD L++ Y+ E+  K++RLQ LR+EFD
Sbjct: 64  NRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRSEFD 123

Query: 122 TIRMKDSETIEEIFNCKKLFICS---------------PPIEVDPMEEDVDVVAV--AMD 181
            I+MK++ETIEE FN   + + S                 +   P + +  VVA+  + D
Sbjct: 124 CIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKD 183

Query: 182 DPTL-------------------------------------------------------- 241
             TL                                                        
Sbjct: 184 LSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNYDNR 243

Query: 242 ----------------------------------------------RYGHFQADCWSKKT 301
                                                         +YGHFQA+CW+ K 
Sbjct: 244 SGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWALKN 303

Query: 302 NSNQAETTLMHEQSNNDQGLLFLTLNVQESSTEEIWYLDSGCSNHMTRRKDIFISVDESH 361
                   +  EQ   D+G+LFL  +VQ++  E  WYLDSGCSNHMT  + IF+++DES 
Sbjct: 304 GVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESF 363

Query: 362 QNVVKI--------------------------------GLKHNLLSVGQLLLRG------ 421
           Q+ VK                                 GLKHNLLS+GQLL RG      
Sbjct: 364 QSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFE 423

Query: 422 ------------------------------------------------------------ 481
                                                                       
Sbjct: 424 GDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSL 483

Query: 482 ----------------HE------CLI-------------------FELVHTDLCGPMRT 541
                           HE      C++                    EL+HTDLCGPMRT
Sbjct: 484 SYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRT 543

Query: 542 TTH--------------------------------------------------------- 601
           TT+                                                         
Sbjct: 544 TTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGE 603

Query: 602 ----GDFLKENGIKHQKTVRRTPQQNGVAERKNRIIMELARSMLKAKKLPDQFWGWGDTV 658
               G+F KE GI HQ T R TPQQNGVAERKNR IME+ARSMLKAK LP++F  WGD V
Sbjct: 604 YIAFGNFFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEF--WGDAV 663

[Close]

BLAST of CSPI01G13260 vs. NCBI nr
Match: KAA0051601.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 686.4 bits (1770), Expect = 2.4e-193
Identity = 413/978 (42.23%), Postives = 524/978 (53.58%), Query Frame = 0


Query: 2   SSNMLQPQLPRFEGKNYMRWSQQMKVLYGSQDLWDIVDNGYSKPESENDLLAQRLNELRD 61
           + NMLQPQLPRF GKN+ +WS QMKVLYGSQ+LWDIV+ GY++ E++++L  Q+L ELR+
Sbjct: 4   NGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRE 63

Query: 62  ARKKNKKALFFIYQAVDENIFERISGVSTAKAAWDALQNLYECEENAKLVRLQTLRAEFD 121
            RKK+KKALFFIYQAVDE IFERIS  ++AKAAWD L++ Y+ E+  K++RLQ LR+EFD
Sbjct: 64  NRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRSEFD 123

Query: 122 TIRMKDSETIEEIFN---------------------CKKLFICSP---PIEVDPMEEDVD 181
            I+MK++ETIEE FN                      +K+    P      V  +EE  D
Sbjct: 124 CIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKD 183

Query: 182 VVAVAM------------------DDPTL------------------------------- 241
           +  +++                  D+P                                 
Sbjct: 184 LSTLSINSLMGSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNYDNR 243

Query: 242 ----------------------------------------------RYGHFQADCWSKKT 301
                                                         +YGHFQA+CW+ K 
Sbjct: 244 SGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWALKN 303

Query: 302 NSNQAETTLMHEQSNNDQGLLFLTLNVQESSTEEIWYLDSGCSNHMTRRKDIFISVDESH 361
                   +  EQ   D+G+LFL  +VQ++  E  WYLDSGCSNHMT  + IF+++DES 
Sbjct: 304 GVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESF 363

Query: 362 QNVVKI--------------------------------GLKHNLLSVGQLLLRG------ 421
           Q+ VK                                 GLKHNLLS+GQLL RG      
Sbjct: 364 QSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFE 423

Query: 422 ------------------------------------------------------------ 481
                                                                       
Sbjct: 424 GDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSL 483

Query: 482 ----------------HE------CLI-------------------FELVHTDLCGPMRT 541
                           HE      C++                    EL+HTDLCGPMRT
Sbjct: 484 SYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRT 543

Query: 542 TTH--------------------------------------------------------- 601
           TT+                                                         
Sbjct: 544 TTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGE 603

Query: 602 ----GDFLKENGIKHQKTVRRTPQQNGVAERKNRIIMELARSMLKAKKLPDQFWGWGDTV 658
               G+F KE GI HQ T R TPQQNGVAERKNR IME+ARSMLKAK LP++F  WGD V
Sbjct: 604 YIAFGNFFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEF--WGDAV 663

[Close]

BLAST of CSPI01G13260 vs. NCBI nr
Match: KAA0038926.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 685.6 bits (1768), Expect = 4.1e-193
Identity = 413/978 (42.23%), Postives = 523/978 (53.48%), Query Frame = 0


Query: 2   SSNMLQPQLPRFEGKNYMRWSQQMKVLYGSQDLWDIVDNGYSKPESENDLLAQRLNELRD 61
           + NMLQPQLPRF GKN+ +WS QMKVLYGSQ+LWDIV+ GY++ E++++L  Q+L ELR+
Sbjct: 4   NGNMLQPQLPRFSGKNFYQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRE 63

Query: 62  ARKKNKKALFFIYQAVDENIFERISGVSTAKAAWDALQNLYECEENAKLVRLQTLRAEFD 121
            RKK+KKALFFIYQAVDE IFERIS  ++AKAAWD L++ Y+ E+  K++RLQ LR+EFD
Sbjct: 64  NRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRSEFD 123

Query: 122 TIRMKDSETIEEIFNCKKLFICS---------------PPIEVDPMEEDVDVVAV--AMD 181
            I+MK++ETIEE FN   + + S                 +   P + +  VVA+  + D
Sbjct: 124 CIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKD 183

Query: 182 DPTL-------------------------------------------------------- 241
             TL                                                        
Sbjct: 184 LSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNYDNR 243

Query: 242 ----------------------------------------------RYGHFQADCWSKKT 301
                                                         +YGHFQA+CW+ K 
Sbjct: 244 SGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWALKN 303

Query: 302 NSNQAETTLMHEQSNNDQGLLFLTLNVQESSTEEIWYLDSGCSNHMTRRKDIFISVDESH 361
                   +  EQ   D+G+LFL  +VQ++  E  WYLDSGCSNHMT  + IF+++DES 
Sbjct: 304 GVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESF 363

Query: 362 QNVVKI--------------------------------GLKHNLLSVGQLLLRG------ 421
           Q+ VK                                 GLKHNLLS+GQLL RG      
Sbjct: 364 QSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFE 423

Query: 422 ------------------------------------------------------------ 481
                                                                       
Sbjct: 424 GDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSL 483

Query: 482 ----------------HE------CLI-------------------FELVHTDLCGPMRT 541
                           HE      C++                    EL+HTDLCGPMRT
Sbjct: 484 SYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRT 543

Query: 542 TTH--------------------------------------------------------- 601
           TT+                                                         
Sbjct: 544 TTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGE 603

Query: 602 ----GDFLKENGIKHQKTVRRTPQQNGVAERKNRIIMELARSMLKAKKLPDQFWGWGDTV 658
               G+F KE GI HQ T R TPQQNGVAERKNR IME+ARSMLKAK LP++F  WGD V
Sbjct: 604 YIAFGNFFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEF--WGDAV 663

[Close]

BLAST of CSPI01G13260 vs. NCBI nr
Match: KAA0039947.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 685.3 bits (1767), Expect = 5.4e-193
Identity = 413/978 (42.23%), Postives = 523/978 (53.48%), Query Frame = 0


Query: 2   SSNMLQPQLPRFEGKNYMRWSQQMKVLYGSQDLWDIVDNGYSKPESENDLLAQRLNELRD 61
           + NMLQPQLPRF GKN+ +WS QMKVLYGSQ+LWDIV+ GY++ E++++L  Q+L ELR+
Sbjct: 4   NGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRE 63

Query: 62  ARKKNKKALFFIYQAVDENIFERISGVSTAKAAWDALQNLYECEENAKLVRLQTLRAEFD 121
            RKK+KKALFFIYQAVDE IFERIS  ++AKAAWD L++ Y+ E+  K++RLQ LR+EFD
Sbjct: 64  NRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRSEFD 123

Query: 122 TIRMKDSETIEEIFNCKKLFICS---------------PPIEVDPMEEDVDVVAV--AMD 181
            I+MK++ETIEE FN   + + S                 +   P + +  VVA+  + D
Sbjct: 124 CIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKD 183

Query: 182 DPTL-------------------------------------------------------- 241
             TL                                                        
Sbjct: 184 LSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNYDNR 243

Query: 242 ----------------------------------------------RYGHFQADCWSKKT 301
                                                         +YGHFQA+CW+ K 
Sbjct: 244 SGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWALKN 303

Query: 302 NSNQAETTLMHEQSNNDQGLLFLTLNVQESSTEEIWYLDSGCSNHMTRRKDIFISVDESH 361
                   +  EQ   D+G+LFL  +VQ++  E  WYLDSGCSNHMT  + IF+++DES 
Sbjct: 304 GVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESF 363

Query: 362 QNVVKI--------------------------------GLKHNLLSVGQLLLRG------ 421
           Q+ VK                                 GLKHNLLS+GQLL RG      
Sbjct: 364 QSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFE 423

Query: 422 ------------------------------------------------------------ 481
                                                                       
Sbjct: 424 GDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSL 483

Query: 482 ----------------HE------CLI-------------------FELVHTDLCGPMRT 541
                           HE      C++                    EL+HTDLCGPMRT
Sbjct: 484 SYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRT 543

Query: 542 TTH--------------------------------------------------------- 601
           TT+                                                         
Sbjct: 544 TTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGE 603

Query: 602 ----GDFLKENGIKHQKTVRRTPQQNGVAERKNRIIMELARSMLKAKKLPDQFWGWGDTV 658
               G+F KE GI HQ T R TPQQNGVAERKNR IME+ARSMLKAK LP++F  WGD V
Sbjct: 604 YIAFGNFFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEF--WGDAV 663

[Close]

BLAST of CSPI01G13260 vs. NCBI nr
Match: KAA0057291.1 (integrase [Cucumis melo var. makuwa] >KAA0060890.1 integrase [Cucumis melo var. makuwa] >KAA0062702.1 integrase [Cucumis melo var. makuwa] >TYJ98712.1 integrase [Cucumis melo var. makuwa] >TYK13441.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 685.3 bits (1767), Expect = 5.4e-193
Identity = 413/978 (42.23%), Postives = 523/978 (53.48%), Query Frame = 0


Query: 2   SSNMLQPQLPRFEGKNYMRWSQQMKVLYGSQDLWDIVDNGYSKPESENDLLAQRLNELRD 61
           + NMLQPQLPRF GKN+ +WS QMKVLYGSQ+LWDIV+ GY++ E++++L  Q+L ELR+
Sbjct: 4   NGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRE 63

Query: 62  ARKKNKKALFFIYQAVDENIFERISGVSTAKAAWDALQNLYECEENAKLVRLQTLRAEFD 121
            RKK+KKALFFIYQAVDE IFERIS  ++AKAAWD L++ Y+ E+  K++RLQ LR+EFD
Sbjct: 64  NRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRSEFD 123

Query: 122 TIRMKDSETIEEIFNCKKLFICS---------------PPIEVDPMEEDVDVVAV--AMD 181
            I+MK++ETIEE FN   + + S                 +   P + +  VVA+  + D
Sbjct: 124 CIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKD 183

Query: 182 DPTL-------------------------------------------------------- 241
             TL                                                        
Sbjct: 184 LSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNYDNR 243

Query: 242 ----------------------------------------------RYGHFQADCWSKKT 301
                                                         +YGHFQA+CW+ K 
Sbjct: 244 SGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWALKN 303

Query: 302 NSNQAETTLMHEQSNNDQGLLFLTLNVQESSTEEIWYLDSGCSNHMTRRKDIFISVDESH 361
                   +  EQ   D+G+LFL  +VQ++  E  WYLDSGCSNHMT  + IF+++DES 
Sbjct: 304 GVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESF 363

Query: 362 QNVVKI--------------------------------GLKHNLLSVGQLLLRG------ 421
           Q+ VK                                 GLKHNLLS+GQLL RG      
Sbjct: 364 QSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFE 423

Query: 422 ------------------------------------------------------------ 481
                                                                       
Sbjct: 424 GDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSL 483

Query: 482 ----------------HE------CLI-------------------FELVHTDLCGPMRT 541
                           HE      C++                    EL+HTDLCGPMRT
Sbjct: 484 SYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRT 543

Query: 542 TTH--------------------------------------------------------- 601
           TT+                                                         
Sbjct: 544 TTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGE 603

Query: 602 ----GDFLKENGIKHQKTVRRTPQQNGVAERKNRIIMELARSMLKAKKLPDQFWGWGDTV 658
               G+F KE GI HQ T R TPQQNGVAERKNR IME+ARSMLKAK LP++F  WGD V
Sbjct: 604 YIAFGNFFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEF--WGDAV 663

[Close]

BLAST of CSPI01G13260 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 130.2 bits (326), Expect = 6.2e-30
Identity = 74/193 (38.34%), Postives = 111/193 (57.51%), Query Frame = 0


Query: 474 PSSSHSTSDEETTPRKTRNIQEIYNTSRRILDEEHV-DFALFANVDPVY----------- 533
           P  S  TS   T  RK   +Q+ Y  S   L    +  F  +  V P+Y           
Sbjct: 27  PEPSVHTSHRRT--RKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAK 86

Query: 534 ----FEEAIQDENWKDAMNQEIDAIRRNEIWELVKLPENKRALGVKWIYRTKLKQNGEVQ 593
               + EA +   W  AM+ EI A+     WE+  LP NK+ +G KW+Y+ K   +G ++
Sbjct: 87  EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 146

Query: 594 KYKARLVVKGYKQKFGMDYKEVFAPVTRLETVRLLLALAAKNNWKVHQMDVKSAFLNGYL 651
           +YKARLV KGY Q+ G+D+ E F+PV +L +V+L+LA++A  N+ +HQ+D+ +AFLNG L
Sbjct: 147 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 206

[Close]

BLAST of CSPI01G13260 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 88.2 bits (217), Expect = 2.7e-17
Identity = 40/92 (43.48%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 525 AIQDENWKDAMNQEIDAIRRNEIWELVKLPENKRALGVKWIYRTKLKQNGEVQKYKARLV 584
           A++D  W  AM +E+DA+ RN+ W LV  P N+  LG KW+++TKL  +G + + KARLV
Sbjct: 34  ALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLV 93

Query: 585 VKGYKQKFGMDYKEVFAPVTRLETVRLLLALA 617
            KG+ Q+ G+ + E ++PV R  T+R +L +A
Sbjct: 94  AKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of CSPI01G13260 vs. TAIR 10
Match: AT1G48720.1 (unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.3 bits (207), Expect = 3.9e-16
Identity = 39/92 (42.39%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 1  MSSNMLQPQLPRFEGKNYMRWSQQMKVLYGSQDLWDIVDNGYSKPESENDLLAQRLNELR 60
          M+SN +  Q+P     NY  WS +MK + G+ D+W+IV+ G+ +PE+E  L   + + LR
Sbjct: 1  MASNNVPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLR 60

Query: 61 DARKKNKKALFFIYQAVDENIFERISGVSTAK 93
          D+RK++KKAL  IYQ +DE+ FE++   ++AK
Sbjct: 61 DSRKRDKKALCLIYQGLDEDTFEKVVEATSAK 92

[Close]

BLAST of CSPI01G13260 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 4.6e-09
Identity = 32/87 (36.78%), Postives = 47/87 (54.02%), Query Frame = 0


Query: 315 NRIIMELARSMLKAKKLPDQFWGWGDTVTYAIYLLNRASTESVQCITPQEAWSGLKPTVS 374
           NR I+E  RSML    LP  F    D    A++++N+  + ++    P E W    PT S
Sbjct: 2   NRTIIEKVRSMLCECGLPKTF--RADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYS 61

Query: 375 HLRMFGCIAYSHISDEKKGKLDDKSEK 402
           +LR FGC+AY H  +   GKL  +++K
Sbjct: 62  YLRRFGCVAYIHCDE---GKLKPRAKK 83

[Close]

BLAST of CSPI01G13260 vs. TAIR 10
Match: AT3G20980.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 47.4 bits (111), Expect = 5.3e-05
Identity = 29/91 (31.87%), Postives = 45/91 (49.45%), Query Frame = 0


Query: 17  NYMRWSQQMKVLYGSQDLWDIVDNG----YSK-PESENDLLAQRLNELRDARKKNKKALF 76
           NY  W+  MK     + LWDIV  G     SK PE    +  Q L+  RD+  K+ KAL 
Sbjct: 18  NYEIWAPIMKTSLAEKGLWDIVKYGIPPDLSKIPELATKIRTQDLSIYRDSAVKDTKALH 77

Query: 77  FIYQAVDENIFERISGVSTAKAAWDALQNLY 103
            +   + +++F +    ++AK  WD ++  Y
Sbjct: 78  LLQSFLPDSVFRKTLETTSAKHLWDLVKEDY 108

The following BLAST results are available for this feature:

BLAST of CSPI01G13260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	6.2e-67	35.65	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	3.3e-52	30.69	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	9.6e-44	25.41	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.1e-42	26.22	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92520	3.8e-16	43.48	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CSPI01G13260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UDP7	8.9e-194	42.33	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001450 PE=...	[more]
A0A5A7UDJ2	1.2e-193	42.23	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001470 PE=...	[more]
A0A5A7TA63	2.0e-193	42.23	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2967G00050 PE=...	[more]
A0A5D3BQ81	2.6e-193	42.23	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4...	[more]
A0A5D3E3T2	2.6e-193	42.23	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4...	[more]

BLAST of CSPI01G13260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051599.1	1.8e-193	42.33	integrase [Cucumis melo var. makuwa]	[more]
KAA0051601.1	2.4e-193	42.23	integrase [Cucumis melo var. makuwa]	[more]
KAA0038926.1	4.1e-193	42.23	integrase [Cucumis melo var. makuwa]	[more]
KAA0039947.1	5.4e-193	42.23	integrase [Cucumis melo var. makuwa]	[more]
KAA0057291.1	5.4e-193	42.23	integrase [Cucumis melo var. makuwa] >KAA0060890.1 integrase [Cucumis melo var. ...	[more]

BLAST of CSPI01G13260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	6.2e-30	38.34	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	2.7e-17	43.48	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
AT1G48720.1	3.9e-16	42.39	unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; B...	[more]
ATMG00710.1	4.6e-09	36.78	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G20980.1	5.3e-05	31.87	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 545..658 e-value: 3.8E-42 score: 144.6
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 63..136 e-value: 4.8E-10 score: 39.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 467..492
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 289..650
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 269..380 e-value: 9.5E-17 score: 62.9
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 210..370 score: 13.0619
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 271..379

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G13260.1	CSPI01G13260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding